Lsi09G007000 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCAATCTGACCTCTACACTTTTGGTATTATATAAATGTGGCCATATCTTTGCTTTTTCTTCACACCTCCAATTGGCCATTTTCCTTTGCTTTCTCTTGTTCACACCCAATTTGGGATCTTAAATTAAGTTTTGTGGTGGTTTTAACAATGGGGGAAGCTGCTGGTTTCACTGACCCAGAGAAGCAGAACCTTCTTCTTCATGATCATGAAGAGAAGCACTTCATGTCCAGTGAAGTCGTCCGTGACATCATCATCGGTGTCTCCGATGGCCTCACCGTGCCGTTTGCCCTCGCAGCCGGACTTTCCGGGGCCGACGTTACATCTGGCATCATCCTCATTGCTGGAATTGCTGAAGTTGCTGCCGGAGCCATCTCCATGGGACTTGGAGGGTATACTACATCCCATTTATTTCATTTTAGTCCTTATTATTAGTTTATCTATGATTTTTGTAATATATATTTGACATGATTTATGTTATGTTCTTGGTTTTATAACAGTATTTGAAGTCACATATGTGTAGGTTAAACATTCAATTTTTTTTAAAAAAATAAAATTCCACGTAACTTTTAGACTTAAACATCTGCCTTTATTTTGGCTTTAAATTAATTTTTGGTTAAAACTTCAAAAGCGGTTTGAGTCTTTGAGAAGTAGATTGAAAAATAATATCTTACTTTATAAGCTTGTTTTTTTGTTGTTTTTTTTTTTTAATGGAAAGATAAATAAGAAAAAGAAAACATTCTCAAAGAGCCTTTAGTGGGTCATTAAAAAAAAAAAAAAAAATCTTTGACACCTATCCATCCACTCACATAATAATTAAAAAAAAGAAGTCTAGTCTAGCTAGCTCATATGTTGATTCTTGAAGAGTCGAAATTAGTATTAATAACGTGCCAAAAGTGTGAAACCATATATACTTAGAAACAATTATTATTTGATTCCCTTCATCGATATTATTACTATGAACAAAAAAAAAAAAAAAAAATCAAACTATTTACAAATGTAGAAAATTTTTACTGTCTATCAGCGATAAATCGCGATAGATAACCGTTTCCGTTTTGTACCTACAATTCATTTCATTTTAGTCTATGTAGTTTCAATCGTCTAAATTTAGTTTCTTATTTTTAATAAATCTTAAATTTTAGTGAAAGTACACGGACTAAGATGAAACAAATCCTAAAATATAAAGACTAAAATGAATTTTTTTTTAAATAAAATTCAAAATTTAGAAAAATTTTAAAAAATGGAAAAATAAGATAAACTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTGATAAAAGTCTATCAGAGTCTATCAGTGATAGAAATGATAGAAGTCTATCAATGTCTATCAGTGTGTTTTTTGCTATTTTTTATAAATAGTTTAAAATTTTTTCTATATGTGAAATTTTTTCTAAAATTTAATTACTTTTTATCATATTTTCCACATGAAATAAAAAAGCTCTAATTTTTTTTTTTTTTTTTTTTGTCAAAGCATTATATATATTTATAAGTAAAGTGTGTAATGAAGGTGTGTTGATTTGAAATGCAGATATCTTGCAGCTAAAAGTGAAGCTGATCATTACATGAGAGAACTGAAGAGGGAACAAGAAGAGGTCATTGCAGTTCCAGACACAGGTAAATTTGGTCTTATCTGACTTTATATATACATATTTGACTACTTGTACATGTAATTTTAATTATTCTTTACTTGCTCTTTTATTTATTTATTTGCAAAGATGATATAATTCCTTAATTAATTTTGGATTAATAGAGTTTAATTGTAAATTAATTATTTCAGAGGCTGCTGAGGTGGCAGATATATTGTCACAGTATGGTGTTGAAGCCCATGAATATGGGCCTGTTGTTGCTGCTCTTAGAAGGAACCCTGAAGCATGGGTTGATTTCATGATGAAGTAATCTTTCCTTCTCACTTCTTTCTTTTTTTTCTTTTCTTTTTTTTTTCTAAATAAAAAAAAAATCTCTAAACTTTGCTTTTATTTCAAACTATCCATATTCTTTTTAAAATTACAATATTACCCTTAACCTTTCATAAAGGTTTATAAACTACTATTTGAATAGAAATTCCCTTTACAATTTTAGACATAAATTGAGATTTAGGACAGTGTCACATTCAATTTTTCACTTCAGGCCACTGTCACATCATTCCAAATCTCATTTTTGCCTCAAGGAGTTGAGAGAAGTGAAGTTGTGAACTCTACTCCTTATTTGTCTCAAAGAGTTTGTAGGCCCACCTCTAAAAAACATCAATTTTATGTTTTATTAACAAGTTTACAATTACCATACTTCACAATTCCTTTGAATTCACAACTCTACTGTTTGCCCTAACGCCTCTTAAATAGACTTTTAAAATGTTTATAAAAATGTCAAGGTCAAATAATATTGCAACTTTTGATAGTATAGAAATATTTTTTAAGTAAAGAAGGTTTTTTTTTTAATTTTTTTTCTTTTACCATTCATTGTTTTTTTAAAAAGGAAAACAAATCTTAAAACTCATAAATATCATTATAATAACTGTTATTCTCTTGATCTTTTCTAAATGCTATACAATGAAAAATACATAGTATATAAATATACAAAGAATTGAACCAAATAAGGAAACAAATAAATTAGCCTAAGACTTTGCTCATTTACAGGAAAGTTTCACAAATAGAAAAAATGTCAAACTATTTACAGAAAATAGCAAAAAAAAAAAAAAAAAAAAAACATTGATAGACTTCTATAAACATCTATAAGTGAACTTCTATTGACAGACTTTAATAGACTTCTATCAGCGTCTATCACAACTATCTACAATATAATAACAATAATAAATTTGGATGATTTTGTAGACTAATATTAAGGAAAAATGTGTTTGGTTGCAGATTTGAATTGGGGTTGGAAAAGCCAGACCCAAAGAGAGCAGTAATAAGTGCATTAACAATAGCCATTTCCTACATAATGGGAGGGTTGGTGCCCTTATCCCCATACATGGTGTTCCCTTCAGCTGGAGAAGCTGTCGTTGCTTCTGTAATTGTAACCATAATTGCATTGCTAATCTTTGGCTTTGCTAAGGGCTATTTCACTGGTAATCGTCCCATTATGAGTGCCCTTCAAACCGCCTTCATTGGAGCCATTGCTTCTGCTGCTGCTTTTCTCATTGCCAAGGCTTTTCGGACTTAAAAACTTATATAATTATACTCCAAAAAGAAATAGCTCGATCTCGCTACCACAATATGACTGTCACTTGTTAAATTAGTTGTTGCATTGGAAAGAAGAAGATATAATTGAATATAGTCATGAGTTGTTCTAATAGTTATGGTCGTGACGTTCCTTAAATTGTCGTGACTACTTCTAATAATTAGGTATTTGCAACTTTTGTGTAAATGTACTCGAATGTTTAATTAAGATTGGTTGTCAAATTTATGAAA TTTCAATCTGACCTCTACACTTTTGGTATTATATAAATGTGGCCATATCTTTGCTTTTTCTTCACACCTCCAATTGGCCATTTTCCTTTGCTTTCTCTTGTTCACACCCAATTTGGGATCTTAAATTAAGTTTTGTGGTGGTTTTAACAATGGGGGAAGCTGCTGGTTTCACTGACCCAGAGAAGCAGAACCTTCTTCTTCATGATCATGAAGAGAAGCACTTCATGTCCAGTGAAGTCGTCCGTGACATCATCATCGGTGTCTCCGATGGCCTCACCGTGCCGTTTGCCCTCGCAGCCGGACTTTCCGGGGCCGACGTTACATCTGGCATCATCCTCATTGCTGGAATTGCTGAAGTTGCTGCCGGAGCCATCTCCATGGGACTTGGAGGATATCTTGCAGCTAAAAGTGAAGCTGATCATTACATGAGAGAACTGAAGAGGGAACAAGAAGAGGTCATTGCAGTTCCAGACACAGAGGCTGCTGAGGTGGCAGATATATTGTCACAGTATGGTGTTGAAGCCCATGAATATGGGCCTGTTGTTGCTGCTCTTAGAAGGAACCCTGAAGCATGGGTTGATTTCATGATGAAATTTGAATTGGGGTTGGAAAAGCCAGACCCAAAGAGAGCAGTAATAAGTGCATTAACAATAGCCATTTCCTACATAATGGGAGGGTTGGTGCCCTTATCCCCATACATGGTGTTCCCTTCAGCTGGAGAAGCTGTCGTTGCTTCTGTAATTGTAACCATAATTGCATTGCTAATCTTTGGCTTTGCTAAGGGCTATTTCACTGGTAATCGTCCCATTATGAGTGCCCTTCAAACCGCCTTCATTGGAGCCATTGCTTCTGCTGCTGCTTTTCTCATTGCCAAGGCTTTTCGGACTTAAAAACTTATATAATTATACTCCAAAAAGAAATAGCTCGATCTCGCTACCACAATATGACTGTCACTTGTTAAATTAGTTGTTGCATTGGAAAGAAGAAGATATAATTGAATATAGTCATGAGTTGTTCTAATAGTTATGGTCGTGACGTTCCTTAAATTGTCGTGACTACTTCTAATAATTAGGTATTTGCAACTTTTGTGTAAATGTACTCGAATGTTTAATTAAGATTGGTTGTCAAATTTATGAAA ATGGGGGAAGCTGCTGGTTTCACTGACCCAGAGAAGCAGAACCTTCTTCTTCATGATCATGAAGAGAAGCACTTCATGTCCAGTGAAGTCGTCCGTGACATCATCATCGGTGTCTCCGATGGCCTCACCGTGCCGTTTGCCCTCGCAGCCGGACTTTCCGGGGCCGACGTTACATCTGGCATCATCCTCATTGCTGGAATTGCTGAAGTTGCTGCCGGAGCCATCTCCATGGGACTTGGAGGATATCTTGCAGCTAAAAGTGAAGCTGATCATTACATGAGAGAACTGAAGAGGGAACAAGAAGAGGTCATTGCAGTTCCAGACACAGAGGCTGCTGAGGTGGCAGATATATTGTCACAGTATGGTGTTGAAGCCCATGAATATGGGCCTGTTGTTGCTGCTCTTAGAAGGAACCCTGAAGCATGGGTTGATTTCATGATGAAATTTGAATTGGGGTTGGAAAAGCCAGACCCAAAGAGAGCAGTAATAAGTGCATTAACAATAGCCATTTCCTACATAATGGGAGGGTTGGTGCCCTTATCCCCATACATGGTGTTCCCTTCAGCTGGAGAAGCTGTCGTTGCTTCTGTAATTGTAACCATAATTGCATTGCTAATCTTTGGCTTTGCTAAGGGCTATTTCACTGGTAATCGTCCCATTATGAGTGCCCTTCAAACCGCCTTCATTGGAGCCATTGCTTCTGCTGCTGCTTTTCTCATTGCCAAGGCTTTTCGGACTTAA MGEAAGFTDPEKQNLLLHDHEEKHFMSSEVVRDIIIGVSDGLTVPFALAAGLSGADVTSGIILIAGIAEVAAGAISMGLGGYLAAKSEADHYMRELKREQEEVIAVPDTEAAEVADILSQYGVEAHEYGPVVAALRRNPEAWVDFMMKFELGLEKPDPKRAVISALTIAISYIMGGLVPLSPYMVFPSAGEAVVASVIVTIIALLIFGFAKGYFTGNRPIMSALQTAFIGAIASAAAFLIAKAFRT Homology
BLAST of Lsi09G007000 vs. ExPASy Swiss-Prot
Match: Q9ZUA5 (Vacuolar iron transporter 1 OS=Arabidopsis thaliana OX=3702 GN=VIT1 PE=1 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 5.4e-93 Identity = 174/234 (74.36%), Postives = 208/234 (88.89%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy Swiss-Prot
Match: P0DO17 (Vacuolar iron transporter 1 OS=Eucalyptus grandis OX=71139 GN=VIT1 PE=1 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 2.7e-92 Identity = 179/236 (75.85%), Postives = 208/236 (88.14%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy Swiss-Prot
Match: Q6MWE5 (Vacuolar iron transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=VIT1 PE=2 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.8e-89 Identity = 168/229 (73.36%), Postives = 199/229 (86.90%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy Swiss-Prot
Match: Q6ERE5 (Vacuolar iron transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=VIT2 PE=2 SV=2) HSP 1 Score: 326.6 bits (836), Expect = 2.4e-88 Identity = 170/238 (71.43%), Postives = 203/238 (85.29%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy Swiss-Prot
Match: P47818 (Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CCC1 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 8.3e-33 Identity = 90/243 (37.04%), Postives = 139/243 (57.20%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy TrEMBL
Match: A0A0A0KUR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G550240 PE=3 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 6.0e-119 Identity = 231/246 (93.90%), Postives = 239/246 (97.15%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy TrEMBL
Match: A0A5A7TYI1 (Vacuolar iron transporter 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold663G00360 PE=3 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118 Identity = 231/246 (93.90%), Postives = 239/246 (97.15%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy TrEMBL
Match: A0A1S3CTX9 (vacuolar iron transporter 1-like OS=Cucumis melo OX=3656 GN=LOC103504490 PE=3 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118 Identity = 231/246 (93.90%), Postives = 239/246 (97.15%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy TrEMBL
Match: A0A6J1FF67 (vacuolar iron transporter 1.1-like OS=Cucurbita moschata OX=3662 GN=LOC111444911 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.4e-114 Identity = 223/246 (90.65%), Postives = 235/246 (95.53%), Query Frame = 0
BLAST of Lsi09G007000 vs. ExPASy TrEMBL
Match: A0A6J1CYN9 (vacuolar iron transporter 1-like OS=Momordica charantia OX=3673 GN=LOC111015683 PE=3 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.7e-113 Identity = 222/244 (90.98%), Postives = 234/244 (95.90%), Query Frame = 0
BLAST of Lsi09G007000 vs. NCBI nr
Match: XP_038874535.1 (vacuolar iron transporter 1-like [Benincasa hispida]) HSP 1 Score: 450.7 bits (1158), Expect = 8.3e-123 Identity = 239/246 (97.15%), Postives = 243/246 (98.78%), Query Frame = 0
BLAST of Lsi09G007000 vs. NCBI nr
Match: XP_004142825.1 (vacuolar iron transporter 1 [Cucumis sativus] >KGN51461.1 hypothetical protein Csa_009044 [Cucumis sativus]) HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118 Identity = 231/246 (93.90%), Postives = 239/246 (97.15%), Query Frame = 0
BLAST of Lsi09G007000 vs. NCBI nr
Match: XP_008467058.1 (PREDICTED: vacuolar iron transporter 1-like [Cucumis melo] >KAA0046401.1 vacuolar iron transporter 1-like [Cucumis melo var. makuwa] >TYK14660.1 vacuolar iron transporter 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118 Identity = 231/246 (93.90%), Postives = 239/246 (97.15%), Query Frame = 0
BLAST of Lsi09G007000 vs. NCBI nr
Match: XP_022938809.1 (vacuolar iron transporter 1.1-like [Cucurbita moschata]) HSP 1 Score: 421.0 bits (1081), Expect = 7.0e-114 Identity = 223/246 (90.65%), Postives = 235/246 (95.53%), Query Frame = 0
BLAST of Lsi09G007000 vs. NCBI nr
Match: KAG6579188.1 (Vacuolar iron transporter 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016702.1 Vacuolar iron transporter 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 421.0 bits (1081), Expect = 7.0e-114 Identity = 223/246 (90.65%), Postives = 235/246 (95.53%), Query Frame = 0
BLAST of Lsi09G007000 vs. TAIR 10
Match: AT2G01770.1 (vacuolar iron transporter 1 ) HSP 1 Score: 342.0 bits (876), Expect = 3.9e-94 Identity = 174/234 (74.36%), Postives = 208/234 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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