Lsi09G006560 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G006560
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr09: 7337174 .. 7337698 (-)
RNA-Seq Expression	Lsi09G006560
Synteny	Lsi09G006560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATTACATTTCTTGCGCCTTAGCGACGCCGTTGATCAAGAATTCGAAGGCGGTGAGGGTCGTGCTTCCAGGCGGCGAGATCCGGCAGTTCCGGGAGTCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGCCGCAGATTCTCCGCTCTCGCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCCATGAAGAGAGTTAATTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCCGCGGCCAGGCGGATTTCGAGCGGTAAGGTTAGGGTTTTACACGAGATTCGGAATCATCAAGAATCGGAAGCGAGGCCGATAATTAGCGATGGAAATGATGGTCCGAGGTTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGTCGGTCAAGGAAGCCATTGTTGGAGACAATTAAAGAAGAACATATTAGGTTAAGATAG

mRNA sequence

ATGGGGAATTACATTTCTTGCGCCTTAGCGACGCCGTTGATCAAGAATTCGAAGGCGGTGAGGGTCGTGCTTCCAGGCGGCGAGATCCGGCAGTTCCGGGAGTCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGCCGCAGATTCTCCGCTCTCGCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCCATGAAGAGAGTTAATTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCCGCGGCCAGGCGGATTTCGAGCGGTAAGGTTAGGGTTTTACACGAGATTCGGAATCATCAAGAATCGGAAGCGAGGCCGATAATTAGCGATGGAAATGATGGTCCGAGGTTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGTCGGTCAAGGAAGCCATTGTTGGAGACAATTAAAGAAGAACATATTAGGTTAAGATAG

Coding sequence (CDS)

ATGGGGAATTACATTTCTTGCGCCTTAGCGACGCCGTTGATCAAGAATTCGAAGGCGGTGAGGGTCGTGCTTCCAGGCGGCGAGATCCGGCAGTTCCGGGAGTCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGCCGCAGATTCTCCGCTCTCGCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCCATGAAGAGAGTTAATTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCCGCGGCCAGGCGGATTTCGAGCGGTAAGGTTAGGGTTTTACACGAGATTCGGAATCATCAAGAATCGGAAGCGAGGCCGATAATTAGCGATGGAAATGATGGTCCGAGGTTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGTCGGTCAAGGAAGCCATTGTTGGAGACAATTAAAGAAGAACATATTAGGTTAAGATAG

Protein sequence

MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGRRFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIRNHQESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR

Homology

[Close]

BLAST of Lsi09G006560 vs. ExPASy TrEMBL
Match: A0A1S3CT06 (uncharacterized protein LOC103504565 OS=Cucumis melo OX=3656 GN=LOC103504565 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 161/174 (92.53%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISCALATPLIKNSKAVRVVLPGGE+RQFR+SVKAAELMLE PSHFLANAQSLHIGR
Sbjct: 1   MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISS K+RVLHE R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLHENR 120

Query: 121 NHQESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR 175
           N QESEA P ISDGN+GPRLSLEG+EGFPMHRLSVCRSRKPLLETIKEE IR R
Sbjct: 121 NLQESEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR 174

[Close]

BLAST of Lsi09G006560 vs. ExPASy TrEMBL
Match: A0A0A0KUY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571440 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.0e-81
Identity = 159/174 (91.38%), Postives = 165/174 (94.83%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISCALATPLIKNSKAVRVVLPGGE+RQFR+SVKAAELMLE PSHFLANAQSLHIGR
Sbjct: 1   MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISS K+RVL+E R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLNENR 120

Query: 121 NHQESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR 175
           N Q SEA P ISDGN+GPRLSLEG+EGFPMHRLSVCRSRKPLLETIKEE IR R
Sbjct: 121 NLQASEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR 174

[Close]

BLAST of Lsi09G006560 vs. ExPASy TrEMBL
Match: A0A6J1JZA3 (uncharacterized protein LOC111489224 OS=Cucurbita maxima OX=3661 GN=LOC111489224 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.1e-80
Identity = 154/172 (89.53%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISC+LATPLIKN KAVRVVLPGGE+RQFRESV AAELMLECP++FLANAQSLHIGR
Sbjct: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRIS+ KVRV+HE R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHENR 120

Query: 121 NHQESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR 173
           N + +E+RP ISD N+GPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR
Sbjct: 121 NRESAESRPRISDENNGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR 172

[Close]

BLAST of Lsi09G006560 vs. ExPASy TrEMBL
Match: A0A6J1FGE8 (uncharacterized protein LOC111445259 OS=Cucurbita moschata OX=3662 GN=LOC111445259 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78
Identity = 155/178 (87.08%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISC+LATPLIKN KAVRVVLPGGE+RQFRESV AAELMLECP++FLANAQSLHIGR
Sbjct: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRIS+ KVRV+H+ R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120

Query: 121 NHQ----ESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR 175
           N +    E+E+RP ISD N+GPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR R
Sbjct: 121 NRESGESEAESRPRISDENNGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRGR 178

[Close]

BLAST of Lsi09G006560 vs. ExPASy TrEMBL
Match: A0A5A7TYJ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00280 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.2e-77
Identity = 152/166 (91.57%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 9   LATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGRRFSALAAD 68
           +ATPLIKNSKAVRVVLPGGE+RQFR+SVKAAELMLE PSHFLANAQSLHIGRRFSALAAD
Sbjct: 28  IATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGRRFSALAAD 87

Query: 69  EELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIRNHQESEAR 128
           EELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISS K+RVLHE RN QESEA 
Sbjct: 88  EELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLHENRNLQESEAM 147

Query: 129 PIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR 175
           P ISDGN+GPRLSLEG+EGFPMHRLSVCRSRKPLLETIKEE IR R
Sbjct: 148 PRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR 193

[Close]

BLAST of Lsi09G006560 vs. NCBI nr
Match: XP_008467138.1 (PREDICTED: uncharacterized protein LOC103504565 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 3.8e-82
Identity = 161/174 (92.53%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISCALATPLIKNSKAVRVVLPGGE+RQFR+SVKAAELMLE PSHFLANAQSLHIGR
Sbjct: 1   MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISS K+RVLHE R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLHENR 120

Query: 121 NHQESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR 175
           N QESEA P ISDGN+GPRLSLEG+EGFPMHRLSVCRSRKPLLETIKEE IR R
Sbjct: 121 NLQESEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR 174

[Close]

BLAST of Lsi09G006560 vs. NCBI nr
Match: XP_038875190.1 (uncharacterized protein LOC120067712 [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 5.0e-82
Identity = 164/178 (92.13%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISCAL+TPLIKNSKAVRVVLPGGE+RQFRE VKAAELMLECPSHFLANAQSLHIGR
Sbjct: 1   MGNYISCALSTPLIKNSKAVRVVLPGGEVRQFREPVKAAELMLECPSHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVL E  
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLQENW 120

Query: 121 NHQ----ESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR 175
           N Q    ESEARP ISDGN+GPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR R
Sbjct: 121 NQQESVEESEARPRISDGNEGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRSR 178

[Close]

BLAST of Lsi09G006560 vs. NCBI nr
Match: XP_004150859.1 (uncharacterized protein LOC101213469 [Cucumis sativus] >KGN51501.1 hypothetical protein Csa_008903 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 159/174 (91.38%), Postives = 165/174 (94.83%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISCALATPLIKNSKAVRVVLPGGE+RQFR+SVKAAELMLE PSHFLANAQSLHIGR
Sbjct: 1   MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISS K+RVL+E R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLNENR 120

Query: 121 NHQESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR 175
           N Q SEA P ISDGN+GPRLSLEG+EGFPMHRLSVCRSRKPLLETIKEE IR R
Sbjct: 121 NLQASEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR 174

[Close]

BLAST of Lsi09G006560 vs. NCBI nr
Match: XP_022993104.1 (uncharacterized protein LOC111489224 [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 154/172 (89.53%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISC+LATPLIKN KAVRVVLPGGE+RQFRESV AAELMLECP++FLANAQSLHIGR
Sbjct: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRIS+ KVRV+HE R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHENR 120

Query: 121 NHQESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR 173
           N + +E+RP ISD N+GPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR
Sbjct: 121 NRESAESRPRISDENNGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR 172

[Close]

BLAST of Lsi09G006560 vs. NCBI nr
Match: XP_023521532.1 (uncharacterized protein LOC111785350 [Cucurbita pepo subsp. pepo] >XP_023522109.1 uncharacterized protein LOC111785985 [Cucurbita pepo subsp. pepo] >XP_023550633.1 uncharacterized protein LOC111808715 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.4 bits (781), Expect = 3.0e-79
Identity = 157/178 (88.20%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNYISC+LATPLIKN KAVRVVLPGGE+RQFRESV AAELMLECP+HFLANAQSLHIGR
Sbjct: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHEIR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRIS+ KVRV+HE R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHENR 120

Query: 121 NHQ----ESEARPIISDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRLR 175
           N +    E+E+RP ISD N+GPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIR R
Sbjct: 121 NRESGESEAESRPRISDENNGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRGR 178

[Close]

BLAST of Lsi09G006560 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-29
Identity = 80/185 (43.24%), Postives = 109/185 (58.92%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNY+S AL+     +S A +V+LP G +R     +KAAELM+E PS FL +A+SL IGR
Sbjct: 1   MGNYVSSALSKTSSSSSSAAKVILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLKIGR 60

Query: 61  RFSALAADEELEFG--NVYLMFPMKRVNSVVTAADLATFFMAANSAARR-----ISSGKV 120
           +F  LAAD++L+    +VY+ FPM R  S   A+DLA  F+AA    R       SS  V
Sbjct: 61  KFCPLAADDDLQIKGCHVYVAFPMTRATSAANASDLARLFVAAKKQRRHRVGSDHSSAAV 120

Query: 121 RVLH---EIRNHQESEARPIISDGNDGPRLSLEGIEGFP----MHRLSVCRSRKPLLETI 172
           +  H    +    E +   +IS G+   +L+LE IE F     MHR+SV +S+KP LETI
Sbjct: 121 KHCHNNGRVSPDGEGDDVKVISAGS---KLNLEDIEEFSAAEFMHRISVSKSKKPKLETI 180

[Close]

BLAST of Lsi09G006560 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = 0


Query: 1   MGNYISCALATPLIKNSKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGR 60
           MGNY+SCAL      +S   +V+LP G +R      KAAELM+E PS+FL + +S+ +GR
Sbjct: 1   MGNYVSCALNK--TSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGR 60

Query: 61  RFSALAADEELEFG--NVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSGKVRVLHE 120
           +F  LAAD++L+ G  +VY+ FPM R  S   A+D+A  ++      R  + G  RV  E
Sbjct: 61  KFIPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTGKK--RTKNCGHRRVSPE 120

Query: 121 IRNHQESEARPIISDGNDGPRLSLEGIEGFP----MHRLSVCRSRKPLLETIKEEHI 172
             N    + R I      GP+L+LE IE F     +HR+SV +S+KP LETI E+H+
Sbjct: 121 --NEDNDDVRLI------GPKLNLEDIEEFSAAEFIHRISVSKSKKPQLETIAEDHV 165

[Close]

BLAST of Lsi09G006560 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-07
Identity = 26/94 (27.66%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 21  RVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGRRFSALAADEELEFGNVYLMF 80
           +++L  G + +F   VK   ++L+ P  F+ N+  +      +A++ADEEL+ G +Y   
Sbjct: 16  KLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISADEELQLGQIYFAL 75

Query: 81  PMKRVNSVVTAADLATFFMAANSAARRISSGKVR 115
           P+  +   + A ++A   + A+SA  R   G  R
Sbjct: 76  PLCWLRQPLKAEEMAALAVKASSALMRGGGGGCR 109

[Close]

BLAST of Lsi09G006560 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 7.4e-07
Identity = 30/126 (23.81%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 17  SKAVRVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGRRFSALAADEELEFGNV 76
           S + +++L  G +++F   VK  +++ + P+ F+ N+  +      SA+A +EEL  G +
Sbjct: 12  SDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELRSGQL 71

Query: 77  YLMFPMKRVNSVVTAADLATFFMAANSAARRIS-----SGKVRVLHEIRNHQESEARPII 136
           Y + P+  +N  + A ++A   + A+SA  +       SG   V    + +Q+     + 
Sbjct: 72  YFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGWVSGDDDVTTSEKTYQKKNIAGVK 131

Query: 137 SDGNDG 138
           ++G  G
Sbjct: 132 TNGGGG 137

[Close]

BLAST of Lsi09G006560 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-06
Identity = 23/87 (26.44%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 21  RVVLPGGEIRQFRESVKAAELMLECPSHFLANAQSLHIGRRFSALAADEELEFGNVYLMF 80
           +++L  G + +F   VK   ++ + P  F+ N+  +      SA++ADEE + G +Y   
Sbjct: 16  KLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAISADEEFQLGQLYFAL 75

Query: 81  PMKRVNSVVTAADLATFFMAANSAARR 108
           P+  ++  + A ++A   + A+SA  R
Sbjct: 76  PLSSLHHSLKAEEMAALAVKASSALMR 102

The following BLAST results are available for this feature:

BLAST of Lsi09G006560 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi09G006560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CT06	1.9e-82	92.53	uncharacterized protein LOC103504565 OS=Cucumis melo OX=3656 GN=LOC103504565 PE=...	[more]
A0A0A0KUY1	6.0e-81	91.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571440 PE=4 SV=1	[more]
A0A6J1JZA3	5.1e-80	89.53	uncharacterized protein LOC111489224 OS=Cucurbita maxima OX=3661 GN=LOC111489224...	[more]
A0A6J1FGE8	1.6e-78	87.08	uncharacterized protein LOC111445259 OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]
A0A5A7TYJ3	5.2e-77	91.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lsi09G006560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467138.1	3.8e-82	92.53	PREDICTED: uncharacterized protein LOC103504565 [Cucumis melo]	[more]
XP_038875190.1	5.0e-82	92.13	uncharacterized protein LOC120067712 [Benincasa hispida]	[more]
XP_004150859.1	1.2e-80	91.38	uncharacterized protein LOC101213469 [Cucumis sativus] >KGN51501.1 hypothetical ...	[more]
XP_022993104.1	1.0e-79	89.53	uncharacterized protein LOC111489224 [Cucurbita maxima]	[more]
XP_023521532.1	3.0e-79	88.20	uncharacterized protein LOC111785350 [Cucurbita pepo subsp. pepo] >XP_023522109....	[more]

BLAST of Lsi09G006560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17350.1	2.4e-29	43.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G03280.1	1.2e-28	41.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	2.5e-07	27.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	7.4e-07	23.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT2G23690.1	3.7e-06	26.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..168 e-value: 1.8E-36 score: 126.3
None	No IPR available	PANTHER	PTHR33052:SF95	DUF4228 DOMAIN PROTEIN	coord: 1..171
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G006560.1	Lsi09G006560.1	mRNA