Lsi09G006550 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G006550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	chr09: 7329366 .. 7332265 (+)
RNA-Seq Expression	Lsi09G006550
Synteny	Lsi09G006550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAATATCACAATTTATTGATGTTTTTCATCACAGAAAGACCAAAGAAAGAAGCATTTGACCCCATTTGATTAGCTCATGCAATGATGCGGCTTAAAACCGCAAAACGAGAGAGAGCAATCATGGCGGCCCCTCTTTCTCTCTCTCTAAGATTTGCCGCTTAACATTATATGGGAAATTTTCTAGCAATATAACACACGCACGCGAAGTGCTTGTAGAAATGCCAAGGTGAGAAAAATGGCCAGAAACCCATTTTCCTAGCTTCTTTTTTCTGGTTCTATTAATGCCACAAAGCTTGGAATACATTCATCCATGTGTCACACCCACCCATTTATCTTCTTCCCGAAATCTCTGGCTAATTTTCTTCACAAACATCGGAGAGGGGAAAAAAAAAAAAAGAGGGTACCAGCTTTCTTTGCTTGAACAAGATTCCATCCCCTTCTTGTAAGTTTCTTCCTCCTTTCCTTCCTTTCTTTATTGGTTTCCCTTTTGTTATATTCCTGTGTCCTGTCTTTGATTCTTTTGTCTTTCGTCCTGCCTTTTCTGTTCTGGGTGTTTTTTCCTTCCTGCTTTCCTCTATTCAACCCTTTTCTTGTTCTAAAGTTTTGCCTCTACTTTTTCCTGTATTTCATTCCTGGGTTTCCGTTAGGAAGGTTATTGGTGGATGGTGGGGTTTTAAATTAACGTATAGCTCTATCAAGGACATGGGTATCCTATAGTTGTTGTTTGTTGTAGCCGGTATTTCTCATTTGTTTAGTTTTGTCATTGTCTCTCGTGGTTTATTTAATCCTTAGACTTATGTTTTAGAACATAATCCATTCATTGGAAAGAACTAAGGCTTGGTTTCTCATATCTCTATGGTGTGGTCAGTTTAAAGATTGTGAAATCTTTTTTTTCCTGATATTGGGAGTTTTTGAGTATGGGGGATCACTTTGTTTTACTGGTTGATCGATTGTTGACGGAGTCGACATTAGAAGCAGCGATCGAGAGCCGAAAGCAATCGACCGAAGCAACCTCCTCTGCCATGGATGGTTTGAAGAGGGACAGGTCTTCCCCAGAAATGGAATTTGATAATATACCATCTCCAAAGAAAATTGTAGAATGTAGAATATGCCAGGATGAGGATGAAGACTCTAACATGGAAACACCCTGCTCGTGCTGTGGCAGCCTTAAGGTGTGTTCATGAACTTATTGCTGATCATTGAATCAAATTAGCAAATTTTCTATATTAAGTCATTGCATAACAAGTATAGCTGATCCTCTTGTTGGCTGGCATTTGATTACATATATGGAGCCTAGTGACAAATTTCTTTGCATTTTTGGAAAGTAAGCACATTGATATATGCCATAGTTGTCATCATAGTTCACTTCAGCAACACGGATACGTCATTCTAATGCACCATTACTGTGAAGTTCACACCTCAAACAAAACTCGTGTTGTCAAACTGTGCTGCTCTTTATTTCTATATCAATTATATTTCTCCCTACCTGAAGATTTCTCTTTGCGTCAATAGTTTTATCATATTGTAATTGTTTCCGTGGGCTGCTGATATTATAATACATGGATATTCACATCATGTTCCATTGAATTTTGCAGTATGCACATCGAAGATGTATACAGAAGTGGTGTAACGAGAAGGGTGACACAATTTGTGAAATATGCCGCCAGGTGGTGTATGGTGCTTTTTAGTTCTTTCCTCCTAGTTTTGTTAATTTTTCAAGCCATTCATCTATGTAAAATTACAATCTTCAGCACAATCGCCTTTTCACCTCGAGCATATCAGTTTGTTTATTGGAGTTTGTATAATGAAACTGAACTGTGGAACTATGATTTGCAGCAATTCAAACCAGGTTACACGGCTCCTCCTCCATTATTTGAAATGGGGCGTATCCCGATGAACTTCAGGTAATGTTCTTGCAACAATACATCCAATATTCCTATGTAATGTTCTTTCTGCTTCCTCTTGAGAATTTTCTGAAGTCCTTTGGTTGACCCCTTTTTCATTGCAGGGGGAACTGGGAGATTTCTAGAAGGAACTTGGATAGTCCTAGCTATATAGCAATGGTTTCATCAAACCGAAACATCGCTGATTCTGACTATGATGAGTTCTCAGCATCTGCTGCAACCAGCGTGCTATGCTGCCATTCAGTTGCTATCATTGTAATTTTTTCCCCCTTAATACACGAAGTTCTTTCCAAAATCACAAATAATTTAATGAATGTTTTTCAAAATAACTTGTGTTTGGAATATTAAATTCGTGCTAGGAAAATATCAAAATCTGAACCACTTATTTTTTTTCTTTTTCTTTGTAGTTCATGGTTCTTCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAAGCGGTGATTACTCTTTCCCTCTGCTTCTGGTAAGAAATCTTACGTTCTATCTTTGTTTTCAAACAAATGCAAAACCAAGATTTCTTCCTAAAGTTAAATTATTCCCCTTCATGACAGTCGATATGCCTGCGAACTTTTGGGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCGTAAGCCCCTGAAACAATCCGATGCATCATTTTTCCCATACAATTAACAAACATGTTCATACTATCCTCAGTGATAATTCTAATTTATTTATGGTCTCTTCTTTTGGGTGACTATGAACAGCTGGCTACGTCCTCAAGTTCACCCATTAGTTCATCCAGCATAGCTCGGACTTCGATATCCCAATCACCCCAACCTCAGCCTTACATTATCCGTGTTCGGTGAGTTTCATACCAGCTCGGAAAAATTCGATTTCGAGGCTGAAAAATGGTGTAGCTGTGGATATCTTAATGCAGAAAGTTTCATGGCTGTAGCCGTGTCAGCTTCAAGTAA

mRNA sequence

CTGAATATCACAATTTATTGATGTTTTTCATCACAGAAAGACCAAAGAAAGAAGCATTTGACCCCATTTGATTAGCTCATGCAATGATGCGGCTTAAAACCGCAAAACGAGAGAGAGCAATCATGGCGGCCCCTCTTTCTCTCTCTCTAAGATTTGCCGCTTAACATTATATGGGAAATTTTCTAGCAATATAACACACGCACGCGAAGTGCTTGTAGAAATGCCAAGGTGAGAAAAATGGCCAGAAACCCATTTTCCTAGCTTCTTTTTTCTGGTTCTATTAATGCCACAAAGCTTGGAATACATTCATCCATGTGTCACACCCACCCATTTATCTTCTTCCCGAAATCTCTGGCTAATTTTCTTCACAAACATCGGAGAGGGGAAAAAAAAAAAAAGAGGGTACCAGCTTTCTTTGCTTGAACAAGATTCCATCCCCTTCTTTTTAAAGATTGTGAAATCTTTTTTTTCCTGATATTGGGAGTTTTTGAGTATGGGGGATCACTTTGTTTTACTGGTTGATCGATTGTTGACGGAGTCGACATTAGAAGCAGCGATCGAGAGCCGAAAGCAATCGACCGAAGCAACCTCCTCTGCCATGGATGGTTTGAAGAGGGACAGGTCTTCCCCAGAAATGGAATTTGATAATATACCATCTCCAAAGAAAATTGTAGAATGTAGAATATGCCAGGATGAGGATGAAGACTCTAACATGGAAACACCCTGCTCGTGCTGTGGCAGCCTTAAGTATGCACATCGAAGATGTATACAGAAGTGGTGTAACGAGAAGGGTGACACAATTTGTGAAATATGCCGCCAGCAATTCAAACCAGGTTACACGGCTCCTCCTCCATTATTTGAAATGGGGCGTATCCCGATGAACTTCAGGGGGAACTGGGAGATTTCTAGAAGGAACTTGGATAGTCCTAGCTATATAGCAATGGTTTCATCAAACCGAAACATCGCTGATTCTGACTATGATGAGTTCTCAGCATCTGCTGCAACCAGCGTGCTATGCTGCCATTCAGTTGCTATCATTTTCATGGTTCTTCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAAGCGGTGATTACTCTTTCCCTCTGCTTCTGTCGATATGCCTGCGAACTTTTGGGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCCTGGCTACGTCCTCAAGTTCACCCATTAGTTCATCCAGCATAGCTCGGACTTCGATATCCCAATCACCCCAACCTCAGCCTTACATTATCCGTGTTCGAAAGTTTCATGGCTGTAGCCGTGTCAGCTTCAAGTAA

Coding sequence (CDS)

ATGGGGGATCACTTTGTTTTACTGGTTGATCGATTGTTGACGGAGTCGACATTAGAAGCAGCGATCGAGAGCCGAAAGCAATCGACCGAAGCAACCTCCTCTGCCATGGATGGTTTGAAGAGGGACAGGTCTTCCCCAGAAATGGAATTTGATAATATACCATCTCCAAAGAAAATTGTAGAATGTAGAATATGCCAGGATGAGGATGAAGACTCTAACATGGAAACACCCTGCTCGTGCTGTGGCAGCCTTAAGTATGCACATCGAAGATGTATACAGAAGTGGTGTAACGAGAAGGGTGACACAATTTGTGAAATATGCCGCCAGCAATTCAAACCAGGTTACACGGCTCCTCCTCCATTATTTGAAATGGGGCGTATCCCGATGAACTTCAGGGGGAACTGGGAGATTTCTAGAAGGAACTTGGATAGTCCTAGCTATATAGCAATGGTTTCATCAAACCGAAACATCGCTGATTCTGACTATGATGAGTTCTCAGCATCTGCTGCAACCAGCGTGCTATGCTGCCATTCAGTTGCTATCATTTTCATGGTTCTTCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAAGCGGTGATTACTCTTTCCCTCTGCTTCTGTCGATATGCCTGCGAACTTTTGGGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCCTGGCTACGTCCTCAAGTTCACCCATTAGTTCATCCAGCATAGCTCGGACTTCGATATCCCAATCACCCCAACCTCAGCCTTACATTATCCGTGTTCGAAAGTTTCATGGCTGTAGCCGTGTCAGCTTCAAGTAA

Protein sequence

MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIVECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLATSSSSPISSSSIARTSISQSPQPQPYIIRVRKFHGCSRVSFK

Homology

[Close]

BLAST of Lsi09G006550 vs. ExPASy Swiss-Prot
Match: Q5T0T0 (E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 GN=MARCHF8 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07
Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 54  PSPKKIVECRICQDE-DEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQF 112
           PS + I  CRIC  E D++S + TPC C GSL + H+ C+Q+W        CE+C+ +F
Sbjct: 74  PSSQDI--CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130

[Close]

BLAST of Lsi09G006550 vs. ExPASy Swiss-Prot
Match: Q0VD59 (E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN=MARCHF8 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.1e-07
Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 62  CRICQDE-DEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQF 112
           CRIC  E D++S + TPC C GSL + H+ C+Q+W        CE+C+ +F
Sbjct: 78  CRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYEF 128

[Close]

BLAST of Lsi09G006550 vs. ExPASy Swiss-Prot
Match: Q9DBD2 (E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 GN=Marchf8 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.1e-07
Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 62  CRICQDE-DEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQF 112
           CRIC  E D++S + TPC C GSL + H+ C+Q+W        CE+C+ +F
Sbjct: 76  CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 126

[Close]

BLAST of Lsi09G006550 vs. ExPASy Swiss-Prot
Match: Q5XH39 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 4.0e-07
Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 54  PSPKKIVECRICQDE-DEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQF 112
           PS + I  CRIC  E D++S + TPC C GSL + H+ C+Q+W        CE+C+ +F
Sbjct: 47  PSSQDI--CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103

[Close]

BLAST of Lsi09G006550 vs. ExPASy Swiss-Prot
Match: Q28IK8 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.0e-07
Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 54  PSPKKIVECRICQDE-DEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQF 112
           PS + I  CRIC  E D++S + TPC C GSL + H+ C+Q+W        CE+C+ +F
Sbjct: 47  PSSQDI--CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103

[Close]

BLAST of Lsi09G006550 vs. ExPASy TrEMBL
Match: A0A5A7TTY1 (DUF3675 domain-containing protein/RINGv domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00260 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 2.1e-144
Identity = 262/281 (93.24%), Postives = 270/281 (96.09%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTESTLEAAIESRK STEATSSAMDGLKRDRSSP+M F+NIPSPKKIV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDRSSPDMGFENIPSPKKIV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQ++PGYTAPPP
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQYEPGYTAPPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRN+AD  YDEFSASAATSVLCCHSVA
Sbjct: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASAATSVLCCHSVA 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           IIFMVLLVLRHSLPLIFNESG YSFPLLL+ICLRTFGIFLP+YVMFKVV AVHRRRLLLA
Sbjct: 181 IIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVVFAVHRRRLLLA 240

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVRKFHGCSRVSF 282
           TS SS ISSSSIAR+S SQSPQPQPYIIRVRKFHGC  VSF
Sbjct: 241 TSHSSLISSSSIARSSTSQSPQPQPYIIRVRKFHGCILVSF 281

[Close]

BLAST of Lsi09G006550 vs. ExPASy TrEMBL
Match: A0A1S3CST5 (uncharacterized protein LOC103504564 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504564 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.6e-139
Identity = 254/271 (93.73%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTESTLEAAIESRK STEATSSAMDGLKRDRSSP+M F+NIPSPKKIV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDRSSPDMGFENIPSPKKIV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQ++PGYTAPPP
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQYEPGYTAPPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRN+AD  YDEFSASAATSVLCCHSVA
Sbjct: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASAATSVLCCHSVA 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           IIFMVLLVLRHSLPLIFNESG YSFPLLL+ICLRTFGIFLP+YVMFKVV AVHRRRLLLA
Sbjct: 181 IIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVVFAVHRRRLLLA 240

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
           TS SS ISSSSIAR+S SQSPQPQPYIIRVR
Sbjct: 241 TSHSSLISSSSIARSSTSQSPQPQPYIIRVR 271

[Close]

BLAST of Lsi09G006550 vs. ExPASy TrEMBL
Match: A0A1S3CST7 (uncharacterized protein LOC103504564 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504564 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.6e-139
Identity = 254/271 (93.73%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTESTLEAAIESRK STEATSSAMDGLKRDRSSP+M F+NIPSPKKIV
Sbjct: 46  MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDRSSPDMGFENIPSPKKIV 105

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQ++PGYTAPPP
Sbjct: 106 ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQYEPGYTAPPP 165

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRN+AD  YDEFSASAATSVLCCHSVA
Sbjct: 166 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASAATSVLCCHSVA 225

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           IIFMVLLVLRHSLPLIFNESG YSFPLLL+ICLRTFGIFLP+YVMFKVV AVHRRRLLLA
Sbjct: 226 IIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVVFAVHRRRLLLA 285

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
           TS SS ISSSSIAR+S SQSPQPQPYIIRVR
Sbjct: 286 TSHSSLISSSSIARSSTSQSPQPQPYIIRVR 316

[Close]

BLAST of Lsi09G006550 vs. ExPASy TrEMBL
Match: A0A6J1DFQ6 (uncharacterized protein LOC111020033 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020033 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.0e-127
Identity = 235/272 (86.40%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTES LEAAIESRK+STEATSSAMD L+RD+SSPEMEF+NIPSPKK+V
Sbjct: 1   MGDHFVLLVDRLLTESRLEAAIESRKRSTEATSSAMDCLRRDKSSPEMEFENIPSPKKMV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHR CIQKWCNEKGDTICEIC QQFKPGYTAPPP
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRSCIQKWCNEKGDTICEICHQQFKPGYTAPPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYI-AMVSSNRNIADSDYDEFSASAATSVLCCHSV 180
           LFEMGRIPMNFRGNWEISRR+L SPSYI AMVSSNRN+ADS+YDEFS SAA SVLCCHSV
Sbjct: 121 LFEMGRIPMNFRGNWEISRRDLGSPSYIAAMVSSNRNVADSEYDEFSTSAANSVLCCHSV 180

Query: 181 AIIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLL 240
           AIIFMVLLVLRH+LPLIFNESGDYSFP+LLSICLRTFGIFLPIYVMFKVV+ VHRRRLL+
Sbjct: 181 AIIFMVLLVLRHTLPLIFNESGDYSFPMLLSICLRTFGIFLPIYVMFKVVTTVHRRRLLM 240

Query: 241 ATSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
             S     S+S+I R+S S  PQ QPY+IRVR
Sbjct: 241 PVSP----STSNIIRSSSSLPPQAQPYVIRVR 268

[Close]

BLAST of Lsi09G006550 vs. ExPASy TrEMBL
Match: A0A6J1K1N8 (uncharacterized protein LOC111489819 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489819 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.3e-122
Identity = 233/272 (85.66%), Postives = 244/272 (89.71%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTE+TLEAAIES+K        AMDGLK D S PEMEFDNIP PKKIV
Sbjct: 1   MGDHFVLLVDRLLTETTLEAAIESQKH-------AMDGLKGDSSCPEMEFDNIPFPKKIV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTA PP
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTASPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPM+FRGNWEISRRNLDS SYIAMVSSNRN+ D++YDEFSASAATSVLC HS A
Sbjct: 121 LFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTEYDEFSASAATSVLCFHSFA 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           I+FMVLLVLRH+LPLIFNESG YSFPLLLSICLR+  I LPIYVM KVVSAVHRRRLLLA
Sbjct: 181 IVFMVLLVLRHTLPLIFNESGGYSFPLLLSICLRSLLIVLPIYVMLKVVSAVHRRRLLLA 240

Query: 241 TSSSSPI-SSSSIARTSISQSPQPQPYIIRVR 272
           TSSSS I S+SSI R+S S S QPQPYIIRVR
Sbjct: 241 TSSSSSIHSTSSIVRSSTSVSSQPQPYIIRVR 265

[Close]

BLAST of Lsi09G006550 vs. NCBI nr
Match: KAA0046318.1 (DUF3675 domain-containing protein/RINGv domain-containing protein [Cucumis melo var. makuwa] >TYK30483.1 DUF3675 domain-containing protein/RINGv domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 521.5 bits (1342), Expect = 4.4e-144
Identity = 262/281 (93.24%), Postives = 270/281 (96.09%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTESTLEAAIESRK STEATSSAMDGLKRDRSSP+M F+NIPSPKKIV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDRSSPDMGFENIPSPKKIV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQ++PGYTAPPP
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQYEPGYTAPPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRN+AD  YDEFSASAATSVLCCHSVA
Sbjct: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASAATSVLCCHSVA 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           IIFMVLLVLRHSLPLIFNESG YSFPLLL+ICLRTFGIFLP+YVMFKVV AVHRRRLLLA
Sbjct: 181 IIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVVFAVHRRRLLLA 240

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVRKFHGCSRVSF 282
           TS SS ISSSSIAR+S SQSPQPQPYIIRVRKFHGC  VSF
Sbjct: 241 TSHSSLISSSSIARSSTSQSPQPQPYIIRVRKFHGCILVSF 281

[Close]

BLAST of Lsi09G006550 vs. NCBI nr
Match: XP_008467135.1 (PREDICTED: uncharacterized protein LOC103504564 isoform X1 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 9.4e-139
Identity = 254/271 (93.73%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTESTLEAAIESRK STEATSSAMDGLKRDRSSP+M F+NIPSPKKIV
Sbjct: 46  MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDRSSPDMGFENIPSPKKIV 105

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQ++PGYTAPPP
Sbjct: 106 ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQYEPGYTAPPP 165

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRN+AD  YDEFSASAATSVLCCHSVA
Sbjct: 166 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASAATSVLCCHSVA 225

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           IIFMVLLVLRHSLPLIFNESG YSFPLLL+ICLRTFGIFLP+YVMFKVV AVHRRRLLLA
Sbjct: 226 IIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVVFAVHRRRLLLA 285

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
           TS SS ISSSSIAR+S SQSPQPQPYIIRVR
Sbjct: 286 TSHSSLISSSSIARSSTSQSPQPQPYIIRVR 316

[Close]

BLAST of Lsi09G006550 vs. NCBI nr
Match: XP_008467137.1 (PREDICTED: uncharacterized protein LOC103504564 isoform X2 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 9.4e-139
Identity = 254/271 (93.73%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTESTLEAAIESRK STEATSSAMDGLKRDRSSP+M F+NIPSPKKIV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDRSSPDMGFENIPSPKKIV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQ++PGYTAPPP
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQYEPGYTAPPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRN+AD  YDEFSASAATSVLCCHSVA
Sbjct: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASAATSVLCCHSVA 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           IIFMVLLVLRHSLPLIFNESG YSFPLLL+ICLRTFGIFLP+YVMFKVV AVHRRRLLLA
Sbjct: 181 IIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVVFAVHRRRLLLA 240

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
           TS SS ISSSSIAR+S SQSPQPQPYIIRVR
Sbjct: 241 TSHSSLISSSSIARSSTSQSPQPQPYIIRVR 271

[Close]

BLAST of Lsi09G006550 vs. NCBI nr
Match: XP_011655462.1 (uncharacterized protein LOC101213226 isoform X1 [Cucumis sativus] >XP_011655463.1 uncharacterized protein LOC101213226 isoform X1 [Cucumis sativus] >KAE8648609.1 hypothetical protein Csa_009008 [Cucumis sativus])

HSP 1 Score: 496.1 bits (1276), Expect = 2.0e-136
Identity = 250/271 (92.25%), Postives = 260/271 (95.94%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTESTLEAAIESRK STEATSSAMDGLKRD+SS +M FDN+ SPKKIV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDKSSTDMGFDNVQSPKKIV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQ+KPGYTAPPP
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQYKPGYTAPPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPMNFRGNWEISRRNLD+PSYIAMVSSNRN+ADS YDEFSASAATSVLCCHSVA
Sbjct: 121 LFEMGRIPMNFRGNWEISRRNLDNPSYIAMVSSNRNVADSGYDEFSASAATSVLCCHSVA 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           IIFMVLLVLRHSLPLIFNESG ++FPLLL+ICLRTFGIFLPIYVMFKVV AVHRRRL LA
Sbjct: 181 IIFMVLLVLRHSLPLIFNESGSHTFPLLLTICLRTFGIFLPIYVMFKVVFAVHRRRLFLA 240

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
           TS SS ISSSSIAR+S SQSPQPQPYIIRVR
Sbjct: 241 TSPSSLISSSSIARSSTSQSPQPQPYIIRVR 271

[Close]

BLAST of Lsi09G006550 vs. NCBI nr
Match: XP_038906751.1 (uncharacterized protein LOC120092674 isoform X2 [Benincasa hispida])

HSP 1 Score: 490.0 bits (1260), Expect = 1.4e-134
Identity = 250/271 (92.25%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRLLTESTLEAAIES+KQSTE TS AMDGLKRDRSSPEMEFDNIPSPKKIV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESQKQSTEPTSCAMDGLKRDRSSPEMEFDNIPSPKKIV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTA PP
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTA-PP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSN N+ADSDYDEFSASA TSVLCCHSVA
Sbjct: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNHNVADSDYDEFSASATTSVLCCHSVA 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           I+FMVLLVLRHSLPLIFNE+GDYSFPLLLSICLRTFGIFLPIYVMFKVVS VHRRRLLLA
Sbjct: 181 IVFMVLLVLRHSLPLIFNENGDYSFPLLLSICLRTFGIFLPIYVMFKVVSTVHRRRLLLA 240

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
           T+     SSSSIA++S SQ  QPQPYIIRVR
Sbjct: 241 TA-----SSSSIAQSSTSQLSQPQPYIIRVR 265

[Close]

BLAST of Lsi09G006550 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-68
Identity = 142/271 (52.40%), Postives = 175/271 (64.58%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRL+TEST+EAAI+SR Q  +A     +    D  + EM  +   S   + 
Sbjct: 1   MGDHFVLLVDRLITESTIEAAIQSRNQMLQANIPVEECTILDDKTLEMLRNGDLS---MA 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRIC DED DSNMETPCSC GS+KYAHRRC+Q+WCNEKGDT CEIC Q+FKP YTAPPP
Sbjct: 61  ECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           L E+G +P++FRGNW IS+R      +I +V ++    D  Y     S+ TS +CC S+ 
Sbjct: 121 LLELGHVPLHFRGNWGISQR---EHRFITVVPADSTFIDQPY---PLSSTTSFICCRSLV 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           +IFM LL+LRH+LPL+   S  + FPL   + LR  GI LPIYV+ K V+   R    L 
Sbjct: 181 LIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRTLD 240

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
           T   SP   SS   T   + PQ Q YII VR
Sbjct: 241 T---SPSDDSSDEETDSWRLPQTQSYIIGVR 259

[Close]

BLAST of Lsi09G006550 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-68
Identity = 142/271 (52.40%), Postives = 175/271 (64.58%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDHFVLLVDRL+TEST+EAAI+SR Q  +A     +    D  + EM  +   S   + 
Sbjct: 1   MGDHFVLLVDRLITESTIEAAIQSRNQMLQANIPVEECTILDDKTLEMLRNGDLS---MA 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           ECRIC DED DSNMETPCSC GS+KYAHRRC+Q+WCNEKGDT CEIC Q+FKP YTAPPP
Sbjct: 61  ECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPP 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           L E+G +P++FRGNW IS+R      +I +V ++    D  Y     S+ TS +CC S+ 
Sbjct: 121 LLELGHVPLHFRGNWGISQR---EHRFITVVPADSTFIDQPY---PLSSTTSFICCRSLV 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRRLLLA 240
           +IFM LL+LRH+LPL+   S  + FPL   + LR  GI LPIYV+ K V+   R    L 
Sbjct: 181 LIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRTLD 240

Query: 241 TSSSSPISSSSIARTSISQSPQPQPYIIRVR 272
           T   SP   SS   T   + PQ Q YII VR
Sbjct: 241 T---SPSDDSSDEETDSWRLPQTQSYIIGVR 259

[Close]

BLAST of Lsi09G006550 vs. TAIR 10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-52
Identity = 108/236 (45.76%), Postives = 147/236 (62.29%), Query Frame = 0


Query: 1   MGDHFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIV 60
           MGDH VL+VDRL ++S L       +   +A S   DG+    S+     ++     K V
Sbjct: 1   MGDHLVLVVDRLSSDSGLGTV---NRADPKADSVNEDGVSESISAGADLCES-----KFV 60

Query: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPP 120
           +CRIC DEDED+NM+TPCSC G+LK+AH  C+Q+WCNEKGDT+CEICRQQ+KPGYTAP  
Sbjct: 61  QCRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAPRQ 120

Query: 121 LFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVA 180
           LF    I MNF  +W I   +L +P ++         AD D+D +S  + TS++CC  +A
Sbjct: 121 LFHYTGISMNFGSDWGIEGLDLRNPYFLTW-----GDADDDHDLYSFHSPTSLICCRLIA 180

Query: 181 IIFMVLLVLRHSLPLIFNESGDYSFPLLLSICLRTFGIFLPIYVMFKVVSAVHRRR 237
           ++F++LL LRHSLP++     D+S  LL+   +RT GI L  YV FK    + R R
Sbjct: 181 LLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQRCR 223

[Close]

BLAST of Lsi09G006550 vs. TAIR 10
Match: AT1G14260.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 4.6e-43
Identity = 97/235 (41.28%), Postives = 140/235 (59.57%), Query Frame = 0


Query: 4   HFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIVECR 63
           H V+ V+ L+     EA    R +S     +A+D    D +  E E   I S     ECR
Sbjct: 5   HTVVYVNGLVRPVLAEAEYSMRTES--PADNAIDIYDGDTTENEEEDSLISS----AECR 64

Query: 64  ICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPPLFE 123
           ICQDE +  N+E+PC+C GSLKYAHR+C+Q+WCNEKG+TICEIC Q ++ GYT+PPP  +
Sbjct: 65  ICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGYTSPPPPPQ 124

Query: 124 MGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVAIIF 183
                ++  G W IS  +LD P  +A+  + R I +S+YD+++AS  +      S A+I 
Sbjct: 125 SEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAFFRSAALIL 184

Query: 184 MVLLVLRHSLPL-IFNESGDYSFPLLLSI-CLRTFGIFLPIYVMFKVVSAVHRRR 237
           M LL+LRH+L +  +++S D     +LS+  LR     LP Y+M   +S +HRRR
Sbjct: 185 MTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILHRRR 233

[Close]

BLAST of Lsi09G006550 vs. TAIR 10
Match: AT1G14260.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 4.6e-43
Identity = 97/235 (41.28%), Postives = 140/235 (59.57%), Query Frame = 0


Query: 4   HFVLLVDRLLTESTLEAAIESRKQSTEATSSAMDGLKRDRSSPEMEFDNIPSPKKIVECR 63
           H V+ V+ L+     EA    R +S     +A+D    D +  E E   I S     ECR
Sbjct: 5   HTVVYVNGLVRPVLAEAEYSMRTES--PADNAIDIYDGDTTENEEEDSLISS----AECR 64

Query: 64  ICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTAPPPLFE 123
           ICQDE +  N+E+PC+C GSLKYAHR+C+Q+WCNEKG+TICEIC Q ++ GYT+PPP  +
Sbjct: 65  ICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGYTSPPPPPQ 124

Query: 124 MGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNIADSDYDEFSASAATSVLCCHSVAIIF 183
                ++  G W IS  +LD P  +A+  + R I +S+YD+++AS  +      S A+I 
Sbjct: 125 SEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAFFRSAALIL 184

Query: 184 MVLLVLRHSLPL-IFNESGDYSFPLLLSI-CLRTFGIFLPIYVMFKVVSAVHRRR 237
           M LL+LRH+L +  +++S D     +LS+  LR     LP Y+M   +S +HRRR
Sbjct: 185 MTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILHRRR 233

The following BLAST results are available for this feature:

BLAST of Lsi09G006550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5T0T0	2.3e-07	42.37	E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 GN=MARCHF8 PE=1 SV=1	[more]
Q0VD59	3.1e-07	43.14	E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN=MARCHF8 PE=2 SV=1	[more]
Q9DBD2	3.1e-07	43.14	E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 GN=Marchf8 PE=2 SV=...	[more]
Q5XH39	4.0e-07	42.37	E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV...	[more]
Q28IK8	4.0e-07	42.37	E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=...	[more]

BLAST of Lsi09G006550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TTY1	2.1e-144	93.24	DUF3675 domain-containing protein/RINGv domain-containing protein OS=Cucumis mel...	[more]
A0A1S3CST5	4.6e-139	93.73	uncharacterized protein LOC103504564 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CST7	4.6e-139	93.73	uncharacterized protein LOC103504564 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DFQ6	4.0e-127	86.40	uncharacterized protein LOC111020033 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1K1N8	2.3e-122	85.66	uncharacterized protein LOC111489819 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lsi09G006550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046318.1	4.4e-144	93.24	DUF3675 domain-containing protein/RINGv domain-containing protein [Cucumis melo ...	[more]
XP_008467135.1	9.4e-139	93.73	PREDICTED: uncharacterized protein LOC103504564 isoform X1 [Cucumis melo]	[more]
XP_008467137.1	9.4e-139	93.73	PREDICTED: uncharacterized protein LOC103504564 isoform X2 [Cucumis melo]	[more]
XP_011655462.1	2.0e-136	92.25	uncharacterized protein LOC101213226 isoform X1 [Cucumis sativus] >XP_011655463....	[more]
XP_038906751.1	1.4e-134	92.25	uncharacterized protein LOC120092674 isoform X2 [Benincasa hispida]	[more]

BLAST of Lsi09G006550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01275.1	2.4e-68	52.40	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	2.4e-68	52.40	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G38070.1	1.4e-52	45.76	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G14260.1	4.6e-43	41.28	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G14260.2	4.6e-43	41.28	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 61..108 e-value: 2.8E-18 score: 76.7
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 62..107 e-value: 5.9E-12 score: 45.5
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 54..114 score: 20.967432
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 51..117 e-value: 5.7E-19 score: 69.5
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 113..228 e-value: 3.3E-41 score: 140.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..50
None	No IPR available	PANTHER	PTHR23012:SF93	OS01G0121200 PROTEIN	coord: 1..266
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 62..108 e-value: 9.06907E-17 score: 70.8192
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 60..112
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..266
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 62..108 score: 8.815781

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G006550.1	Lsi09G006550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding