Lsi09G006400 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G006400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	homeobox-leucine zipper protein HOX3-like
Location	chr09: 7091257 .. 7091523 (+)
RNA-Seq Expression	Lsi09G006400
Synteny	Lsi09G006400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGTGAGTATTTGAAGAGATGGTTTGGATCATTATCAGAGCAAAACCGTCGGTTGCGGCGGGAACTGGAGGAGCTGAGGGCCATCAAGGTTGCTCCGTCGGCCATCGTCTCACGCCACGACCGGCAACCACCCCTCTCGACGTCTACTACAACCATGTGTCCCCGGTGTGAGCATATAACCAAGAACGCAATTGCGGCCCCAAGGCCATCGAAGGTGGCTATGTCCACCCTCAAATTGCAGCAGCCGTCGCGAGCTTGTTGA

mRNA sequence

ATGGAATGTGAGTATTTGAAGAGATGGTTTGGATCATTATCAGAGCAAAACCGTCGGTTGCGGCGGGAACTGGAGGAGCTGAGGGCCATCAAGGTTGCTCCGTCGGCCATCGTCTCACGCCACGACCGGCAACCACCCCTCTCGACGTCTACTACAACCATGTGTCCCCGGTGTGAGCATATAACCAAGAACGCAATTGCGGCCCCAAGGCCATCGAAGGTGGCTATGTCCACCCTCAAATTGCAGCAGCCGTCGCGAGCTTGTTGA

Coding sequence (CDS)

ATGGAATGTGAGTATTTGAAGAGATGGTTTGGATCATTATCAGAGCAAAACCGTCGGTTGCGGCGGGAACTGGAGGAGCTGAGGGCCATCAAGGTTGCTCCGTCGGCCATCGTCTCACGCCACGACCGGCAACCACCCCTCTCGACGTCTACTACAACCATGTGTCCCCGGTGTGAGCATATAACCAAGAACGCAATTGCGGCCCCAAGGCCATCGAAGGTGGCTATGTCCACCCTCAAATTGCAGCAGCCGTCGCGAGCTTGTTGA

Protein sequence

MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEHITKNAIAAPRPSKVAMSTLKLQQPSRAC

Homology

[Close]

BLAST of Lsi09G006400 vs. ExPASy Swiss-Prot
Match: Q9XH38 (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica OX=39946 GN=HOX3 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-16
Identity = 49/89 (55.06%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           MECEYLKR FGSL+E+NRRL+RE+EELRA++VAP  ++S H RQ PL  S  TMCPRCE 
Sbjct: 137 MECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQ-PLPASALTMCPRCER 196

Query: 61  ITKNA---IAAPRPSKVAMSTLKLQQPSR 87
           IT         P PS  A +      P R
Sbjct: 197 ITAATGPPAVRPPPSSAAAAAPSPFHPRR 224

[Close]

BLAST of Lsi09G006400 vs. ExPASy Swiss-Prot
Match: Q0JKX1 (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX3 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-16
Identity = 49/89 (55.06%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           MECEYLKR FGSL+E+NRRL+RE+EELRA++VAP  ++S H RQ PL  S  TMCPRCE 
Sbjct: 137 MECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQ-PLPASALTMCPRCER 196

Query: 61  ITKNA---IAAPRPSKVAMSTLKLQQPSR 87
           IT         P PS  A +      P R
Sbjct: 197 ITAATGPPAVRPPPSSAAAAAPSPFHPRR 224

[Close]

BLAST of Lsi09G006400 vs. ExPASy Swiss-Prot
Match: Q8S9N6 (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana OX=3702 GN=ATHB-17 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-13
Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           MECEYLKRWFGSL+E+N RL RE+EELRA+KV P+ +          S S+ TMCPRCE 
Sbjct: 198 MECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTV---------NSASSLTMCPRCER 257

Query: 61  ITKNA----IAAPRPSK 74
           +T  A       P P+K
Sbjct: 258 VTPAASPSRAVVPVPAK 265

[Close]

BLAST of Lsi09G006400 vs. ExPASy Swiss-Prot
Match: Q8GXM7 (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana OX=3702 GN=ATHB-X PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-12
Identity = 38/62 (61.29%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           MECEYLKRWFGSL EQNRRL+ E+EELRA+K              P STS  TMCPRCE 
Sbjct: 128 MECEYLKRWFGSLKEQNRRLQIEVEELRALK--------------PSSTSALTMCPRCER 175

Query: 61  IT 63
           +T
Sbjct: 188 VT 175

[Close]

BLAST of Lsi09G006400 vs. ExPASy Swiss-Prot
Match: Q84U86 (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica OX=39946 GN=HOX2 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-08
Identity = 26/61 (42.62%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           ++CEYLKRW   L+++N+RL +EL +LRA+K APS   +   +    + +T TMCP C  
Sbjct: 174 VDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRR 233

Query: 61  I 62
           +
Sbjct: 234 V 234

[Close]

BLAST of Lsi09G006400 vs. ExPASy TrEMBL
Match: A0A5A7TTB8 (Homeobox-leucine zipper protein HOX3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00090 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDR-QPPLSTSTTTMCPRCE 60
           +ECEY+KR FGSL+EQNRRL+ ELEELRAIKVAP A+VSRH+R QPPLS ST T+CPRCE
Sbjct: 137 LECEYMKRCFGSLTEQNRRLQWELEELRAIKVAPPAVVSRHNRSQPPLSRSTITICPRCE 196

Query: 61  HITKN---------AIAAPRPSKVAMSTLKLQQPSRAC 89
            IT N           A    S+V +S LKL+QPSRAC
Sbjct: 197 RITSNKNTVAENATTTATAMQSEVVLSALKLRQPSRAC 234

[Close]

BLAST of Lsi09G006400 vs. ExPASy TrEMBL
Match: A0A1S3CSV7 (homeobox-leucine zipper protein HOX3-like OS=Cucumis melo OX=3656 GN=LOC103504579 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDR-QPPLSTSTTTMCPRCE 60
           +ECEY+KR FGSL+EQNRRL+ ELEELRAIKVAP A+VSRH+R QPPLS ST T+CPRCE
Sbjct: 137 LECEYMKRCFGSLTEQNRRLQWELEELRAIKVAPPAVVSRHNRSQPPLSRSTITICPRCE 196

Query: 61  HITKN---------AIAAPRPSKVAMSTLKLQQPSRAC 89
            IT N           A    S+V +S LKL+QPSRAC
Sbjct: 197 RITSNKNTVAENATTTATAMQSEVVLSALKLRQPSRAC 234

[Close]

BLAST of Lsi09G006400 vs. ExPASy TrEMBL
Match: A0A6J1FM68 (homeobox-leucine zipper protein HOX3-like OS=Cucurbita moschata OX=3662 GN=LOC111445474 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.2e-22
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           MEC+YL+RWFGSL+EQNRRLRRELEELRA KVA  A+VSRH RQPPL  ST TMCP+C+ 
Sbjct: 131 MECQYLRRWFGSLTEQNRRLRRELEELRATKVAVPAVVSRHSRQPPLPVSTITMCPQCKR 190

Query: 61  I------------TKNAIA-APRPSKVAMSTLKLQQPSRA 88
           +            T+ AIA    PSK   S LKLQQPS+A
Sbjct: 191 VTAATITSSPAAATQTAIATTATPSKAVRSALKLQQPSQA 230

[Close]

BLAST of Lsi09G006400 vs. ExPASy TrEMBL
Match: A0A6J1JLP7 (homeobox-leucine zipper protein HOX3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487015 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.2e-21
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 2   ECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEHI 61
           ECEYLKRWFGSL+EQNRRLR+ELEELRA+KVAP+A+VS H RQPPL  S  TMCPRCE +
Sbjct: 127 ECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPISAITMCPRCERV 186

Query: 62  TKNAI--------AAPRPSKVAMSTLKLQQPS 86
           + + I        A+  P +  +S LKL+QPS
Sbjct: 187 SASTITYGKGASSASTMPPEAFLSALKLRQPS 218

[Close]

BLAST of Lsi09G006400 vs. ExPASy TrEMBL
Match: A0A6J1JHC4 (homeobox-leucine zipper protein ATHB-17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487015 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.2e-21
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 2   ECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEHI 61
           ECEYLKRWFGSL+EQNRRLR+ELEELRA+KVAP+A+VS H RQPPL  S  TMCPRCE +
Sbjct: 122 ECEYLKRWFGSLTEQNRRLRQELEELRAMKVAPTAVVSGHGRQPPLPISAITMCPRCERV 181

Query: 62  TKNAI--------AAPRPSKVAMSTLKLQQPS 86
           + + I        A+  P +  +S LKL+QPS
Sbjct: 182 SASTITYGKGASSASTMPPEAFLSALKLRQPS 213

[Close]

BLAST of Lsi09G006400 vs. NCBI nr
Match: XP_008467159.1 (PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis melo] >KAA0046304.1 homeobox-leucine zipper protein HOX3-like [Cucumis melo var. makuwa] >TYK30469.1 homeobox-leucine zipper protein HOX3-like [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 3.8e-22
Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDR-QPPLSTSTTTMCPRCE 60
           +ECEY+KR FGSL+EQNRRL+ ELEELRAIKVAP A+VSRH+R QPPLS ST T+CPRCE
Sbjct: 137 LECEYMKRCFGSLTEQNRRLQWELEELRAIKVAPPAVVSRHNRSQPPLSRSTITICPRCE 196

Query: 61  HITKN---------AIAAPRPSKVAMSTLKLQQPSRAC 89
            IT N           A    S+V +S LKL+QPSRAC
Sbjct: 197 RITSNKNTVAENATTTATAMQSEVVLSALKLRQPSRAC 234

[Close]

BLAST of Lsi09G006400 vs. NCBI nr
Match: XP_038875532.1 (homeobox-leucine zipper protein ATHB-17-like isoform X2 [Benincasa hispida])

HSP 1 Score: 114.8 bits (286), Expect = 3.8e-22
Identity = 65/90 (72.22%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           +ECEYLKRWF SL+EQNR LRRELEELRAIKVAP AIVSR DRQPPLSTST TMCPRCE 
Sbjct: 122 IECEYLKRWFRSLTEQNRWLRRELEELRAIKVAPPAIVSRRDRQPPLSTSTITMCPRCER 181

Query: 61  I-------TKNAIAA-PRPSKVAMSTLKLQ 83
           I       T+ AIAA    SKV +S LKL+
Sbjct: 182 ITSTKAAVTETAIAATTMSSKVVLSALKLR 211

[Close]

BLAST of Lsi09G006400 vs. NCBI nr
Match: XP_038875533.1 (homeobox-leucine zipper protein ATHB-17-like isoform X3 [Benincasa hispida])

HSP 1 Score: 114.8 bits (286), Expect = 3.8e-22
Identity = 65/90 (72.22%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           +ECEYLKRWF SL+EQNR LRRELEELRAIKVAP AIVSR DRQPPLSTST TMCPRCE 
Sbjct: 121 IECEYLKRWFRSLTEQNRWLRRELEELRAIKVAPPAIVSRRDRQPPLSTSTITMCPRCER 180

Query: 61  I-------TKNAIAA-PRPSKVAMSTLKLQ 83
           I       T+ AIAA    SKV +S LKL+
Sbjct: 181 ITSTKAAVTETAIAATTMSSKVVLSALKLR 210

[Close]

BLAST of Lsi09G006400 vs. NCBI nr
Match: XP_038875531.1 (homeobox-leucine zipper protein HOX3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 114.8 bits (286), Expect = 3.8e-22
Identity = 65/90 (72.22%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           +ECEYLKRWF SL+EQNR LRRELEELRAIKVAP AIVSR DRQPPLSTST TMCPRCE 
Sbjct: 133 IECEYLKRWFRSLTEQNRWLRRELEELRAIKVAPPAIVSRRDRQPPLSTSTITMCPRCER 192

Query: 61  I-------TKNAIAA-PRPSKVAMSTLKLQ 83
           I       T+ AIAA    SKV +S LKL+
Sbjct: 193 ITSTKAAVTETAIAATTMSSKVVLSALKLR 222

[Close]

BLAST of Lsi09G006400 vs. NCBI nr
Match: XP_022939643.1 (homeobox-leucine zipper protein HOX3-like [Cucurbita moschata])

HSP 1 Score: 113.6 bits (283), Expect = 8.6e-22
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           MEC+YL+RWFGSL+EQNRRLRRELEELRA KVA  A+VSRH RQPPL  ST TMCP+C+ 
Sbjct: 131 MECQYLRRWFGSLTEQNRRLRRELEELRATKVAVPAVVSRHSRQPPLPVSTITMCPQCKR 190

Query: 61  I------------TKNAIA-APRPSKVAMSTLKLQQPSRA 88
           +            T+ AIA    PSK   S LKLQQPS+A
Sbjct: 191 VTAATITSSPAAATQTAIATTATPSKAVRSALKLQQPSQA 230

[Close]

BLAST of Lsi09G006400 vs. TAIR 10
Match: AT2G01430.1 (homeobox-leucine zipper protein 17 )

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-14
Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           MECEYLKRWFGSL+E+N RL RE+EELRA+KV P+ +          S S+ TMCPRCE 
Sbjct: 198 MECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTV---------NSASSLTMCPRCER 257

Query: 61  ITKNA----IAAPRPSK 74
           +T  A       P P+K
Sbjct: 258 VTPAASPSRAVVPVPAK 265

[Close]

BLAST of Lsi09G006400 vs. TAIR 10
Match: AT1G70920.1 (homeobox-leucine zipper protein 18 )

HSP 1 Score: 73.6 bits (179), Expect = 9.2e-14
Identity = 38/62 (61.29%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           MECEYLKRWFGSL EQNRRL+ E+EELRA+K              P STS  TMCPRCE 
Sbjct: 128 MECEYLKRWFGSLKEQNRRLQIEVEELRALK--------------PSSTSALTMCPRCER 175

Query: 61  IT 63
           +T
Sbjct: 188 VT 175

[Close]

BLAST of Lsi09G006400 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 )

HSP 1 Score: 57.0 bits (136), Expect = 8.9e-09
Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           ++CEYLKR   +L+E+NRRL++E+ ELRA+K++P   +      PP   +T TMCP CE 
Sbjct: 222 VDCEYLKRCCDNLTEENRRLQKEVSELRALKLSPHLYM---HMTPP---TTLTMCPSCER 281

Query: 61  ITKNAIAAPRPSKVAMSTLKLQQPS 86
           ++ +A           +   + +PS
Sbjct: 282 VSSSAATVTAAPSTTTTPTVVGRPS 300

[Close]

BLAST of Lsi09G006400 vs. TAIR 10
Match: AT4G16780.1 (homeobox protein 2 )

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-08
Identity = 29/71 (40.85%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           ++CE+L+R   +L+E+NRRL++E+ ELRA+K++P   +      PP   +T TMCP CEH
Sbjct: 188 VDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYM---HMSPP---TTLTMCPSCEH 247

Query: 61  ITKNAIAAPRP 72
           +   ++  P+P
Sbjct: 248 V---SVPPPQP 249

[Close]

BLAST of Lsi09G006400 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 54.7 bits (130), Expect = 4.4e-08
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 1   MECEYLKRWFGSLSEQNRRLRRELEELRAIKVAPSAIVSRHDRQPPLSTSTTTMCPRCEH 60
           ++CEYLKR   SL+E+NRRL++E++ELR +K +    +        L  +T TMCP CE 
Sbjct: 249 VDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQ-------LPATTLTMCPSCER 308

Query: 61  ITKNAIAAPRPSKVAMSTLKLQQPS 86
           +   A +A +PS  A   L L   S
Sbjct: 309 V---ATSAAQPSTSAAHNLCLSTSS 323

The following BLAST results are available for this feature:

BLAST of Lsi09G006400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XH38	1.1e-16	55.06	Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q0JKX1	1.1e-16	55.06	Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q8S9N6	2.0e-13	53.25	Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q8GXM7	1.3e-12	61.29	Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana OX=3702 GN=ATHB-X...	[more]
Q84U86	3.3e-08	42.62	Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]

BLAST of Lsi09G006400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TTB8	1.9e-22	64.29	Homeobox-leucine zipper protein HOX3-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CSV7	1.9e-22	64.29	homeobox-leucine zipper protein HOX3-like OS=Cucumis melo OX=3656 GN=LOC10350457...	[more]
A0A6J1FM68	4.2e-22	62.00	homeobox-leucine zipper protein HOX3-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JLP7	1.2e-21	61.96	homeobox-leucine zipper protein HOX3-like isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1JHC4	1.2e-21	61.96	homeobox-leucine zipper protein ATHB-17-like isoform X2 OS=Cucurbita maxima OX=3...	[more]

BLAST of Lsi09G006400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467159.1	3.8e-22	64.29	PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis melo] >KAA0046304....	[more]
XP_038875532.1	3.8e-22	72.22	homeobox-leucine zipper protein ATHB-17-like isoform X2 [Benincasa hispida]	[more]
XP_038875533.1	3.8e-22	72.22	homeobox-leucine zipper protein ATHB-17-like isoform X3 [Benincasa hispida]	[more]
XP_038875531.1	3.8e-22	72.22	homeobox-leucine zipper protein HOX3-like isoform X1 [Benincasa hispida]	[more]
XP_022939643.1	8.6e-22	62.00	homeobox-leucine zipper protein HOX3-like [Cucurbita moschata]	[more]

BLAST of Lsi09G006400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01430.1	1.4e-14	53.25	homeobox-leucine zipper protein 17	[more]
AT1G70920.1	9.2e-14	61.29	homeobox-leucine zipper protein 18	[more]
AT2G44910.1	8.9e-09	36.47	homeobox-leucine zipper protein 4	[more]
AT4G16780.1	2.0e-08	40.85	homeobox protein 2	[more]
AT5G06710.1	4.4e-08	40.00	homeobox from Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 10..33
None	No IPR available	PANTHER	PTHR45714:SF8	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17	coord: 1..77
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 1..77
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 1..40 e-value: 3.8E-12 score: 56.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G006400.1	Lsi09G006400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding