Lsi09G006230 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G006230
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1218)
Location	chr09: 6868209 .. 6870420 (-)
RNA-Seq Expression	Lsi09G006230
Synteny	Lsi09G006230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTGCAATACAAAATAAAATTATAATAAAATAAAATAAAACCAAAAAATAAAATAAAAAGTAAAAGTAGAATAAAGAAAATAAAACAAAAACAAAAAGCATCCCAAGCAAAGATATTATTTCTTGAAAAACCGACGACAAAAGAACGAAAAACGAAGAGAAAAAAAAGGACTGGCAGTGGCCGCCGCAGATCGGAGACTTCACCGGAGTTGAATCAGTTACAACAATGGCTACTTCTTTGTTTGTAATAGTCATAATCGCTTCTCTTCATCTAATCGCCTTCGTATTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGTATCTCTCTCCCTCTTTTCTGATTCCTCTGTAAATTGAGGCTTCTGAAACCTTCTGAGTTCTTGTTTCTTTGCATTTATGGACTGAAAAGGCAACGGTAGTGCCGGATGAGTACGACGAGACTACTCACTGCGTCTACGACTCCGATGCATCGACAACGTACGGTCTTGTAGCGTTTGGTTTGTTATTGATTAGCCACACAGTGCTTATGGTAGTCACAAGATGTCTCTGCTGTGGTAAAGGCTTGAGAAGTGGAGGATCTACTGTTTGTGCCATCATTCTCTTCGTCGTTTCTTGGTATTTTCCTATTTTCTCGATATCTTGAACTGAATAGAATATTCTCAAATTATAAACTAATCTACTGATGGATCCATTTATCTTGATTTTCTCTAATTACTGTTTCTTGTTATGTGAATCATTTGGCCTAGAAGTTTGAAGTGTTTTGAGTAAAGTTCTGCAGATTGGAGGGTTTGTATATATATCTCTATATTACTAAAAAGTAAAATTTTAGTGTGATTGATTTCCATTCAGAAGAACTTCACTTATTAAGCTCAGATCATATGGAAATGAAAAGTACCATTAATCCAAGTAAAATTTCTTTGTCCAAATTAATATTTGTTGCTGAATATCATTGGTTAAATATGTACCGAGGTGTTGAATTTCTGCTTAATTGCTATCACTCAAAATGTTTGTTTGAGGATATGATTGAGAGACTTTTATTCTTATACACTAGTTTGGAAGTATGAACTGATACTAAGACTCTACTAAGCATTAAATCACTATTAAAAACCCAAATCCAAAACTTGTTAAGCTTATAAATAAGTCTTCCACCTCTAAATTTGTTTTTAGCTTACGCTGATCCTACAACATTTGGAGTCAAGAAAACTCAATTCCTAAGTAGGTGGCCACCATGGATTGAACCCATGATCTCTTAATCATTTACCACTAAGCCAACCCATGATAGTTCTTCTTCCTCTAAATTTCTTGTTTTATTATCTTCCTTTTACTAATATTTTCAAAAATCAAGCTAAGTTTTGAAAACTTGTTTTTATTTTTGGAATTTGGTTAAGAATTCAACTGGTTTTACTTAAGAAAGATGCAGTCCATTTTAAGAAATTGAGAATAAATATGCTTAATTCTCAAAAACCAAAAACTAAAACCAAATAGTTATTAAGTTGATTCATTATGGTAAATCCGATCTCTTTTTTTATATGTTCTTTAGCGCTAACTTTTGAAAAATGAAACTAGGCATTTCTTCTTAGGAGCTGAGTCTCTGTTGCTGGCTGGGTCTGTAAGGAATGCCTACCACACCAAGTACAGATCCGCATTGCCTCTCAAGAACTTGTCGTGTGCCATGCTTCGCCGTGGGGTGTTCGCGGCTGCAGCAGCTATGACATTTCTGTCATTGGTGTTTTCAATCCTTTACTACTCGATGCACTCAAGAGCCGATACGGGAGGCTGGCAGAAGCATCAGAATGAAGGCGTCGGCATGGTGCCTTCGAATTTTCCCCAAGAAGAGCAGCACGATCGAAGAGCGGGGGAATTCGAGAAGGTTTAGCTATGGCAGGATTTGATCATTAGACTTTATGCTGGGAAAAACAGGTAGAACAAAATATCAAGTTGTTGCTAAACTACGAATATGTAAAGTGGTAGCTGGTATATCATATATGTTTTGGTTTTTAACTGTGGACTCCAAGATTCATTGCTTAGTGAATTTTGGACCATTCATTTAAACTTACACTCCTAATATATTACCCTTTTTTTTTCTTTCTTTTTTGGTATATGAGGTTTGGTGTATTTTCCAGTTTGGTTATGGAGCTTTCAAATATTCTCTCTTTAGGCATTGAAAAATCTCTTTCATTCTTTGTCCCTCTTTTTTAAATAACTTATTT

mRNA sequence

ACTCTGCAATACAAAATAAAATTATAATAAAATAAAATAAAACCAAAAAATAAAATAAAAAGTAAAAGTAGAATAAAGAAAATAAAACAAAAACAAAAAGCATCCCAAGCAAAGATATTATTTCTTGAAAAACCGACGACAAAAGAACGAAAAACGAAGAGAAAAAAAAGGACTGGCAGTGGCCGCCGCAGATCGGAGACTTCACCGGAGTTGAATCAGTTACAACAATGGCTACTTCTTTGTTTGTAATAGTCATAATCGCTTCTCTTCATCTAATCGCCTTCGTATTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGCAACGGTAGTGCCGGATGAGTACGACGAGACTACTCACTGCGTCTACGACTCCGATGCATCGACAACGTACGGTCTTGTAGCGTTTGGTTTGTTATTGATTAGCCACACAGTGCTTATGGTAGTCACAAGATGTCTCTGCTGTGGTAAAGGCTTGAGAAGTGGAGGATCTACTGTTTGTGCCATCATTCTCTTCGTCGTTTCTTGGCATTTCTTCTTAGGAGCTGAGTCTCTGTTGCTGGCTGGGTCTGTAAGGAATGCCTACCACACCAAGTACAGATCCGCATTGCCTCTCAAGAACTTGTCGTGTGCCATGCTTCGCCGTGGGGTGTTCGCGGCTGCAGCAGCTATGACATTTCTGTCATTGGTGTTTTCAATCCTTTACTACTCGATGCACTCAAGAGCCGATACGGGAGGCTGGCAGAAGCATCAGAATGAAGGCGTCGGCATGGTGCCTTCGAATTTTCCCCAAGAAGAGCAGCACGATCGAAGAGCGGGGGAATTCGAGAAGGTTTAGCTATGGCAGGATTTGATCATTAGACTTTATGCTGGGAAAAACAGGTAGAACAAAATATCAAGTTGTTGCTAAACTACGAATATGTAAAGTGGTAGCTGGTATATCATATATGTTTTGGTTTTTAACTGTGGACTCCAAGATTCATTGCTTAGTGAATTTTGGACCATTCATTTAAACTTACACTCCTAATATATTACCCTTTTTTTTTCTTTCTTTTTTGGTATATGAGGTTTGGTGTATTTTCCAGTTTGGTTATGGAGCTTTCAAATATTCTCTCTTTAGGCATTGAAAAATCTCTTTCATTCTTTGTCCCTCTTTTTTAAATAACTTATTT

Coding sequence (CDS)

ATGGCTACTTCTTTGTTTGTAATAGTCATAATCGCTTCTCTTCATCTAATCGCCTTCGTATTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGCAACGGTAGTGCCGGATGAGTACGACGAGACTACTCACTGCGTCTACGACTCCGATGCATCGACAACGTACGGTCTTGTAGCGTTTGGTTTGTTATTGATTAGCCACACAGTGCTTATGGTAGTCACAAGATGTCTCTGCTGTGGTAAAGGCTTGAGAAGTGGAGGATCTACTGTTTGTGCCATCATTCTCTTCGTCGTTTCTTGGCATTTCTTCTTAGGAGCTGAGTCTCTGTTGCTGGCTGGGTCTGTAAGGAATGCCTACCACACCAAGTACAGATCCGCATTGCCTCTCAAGAACTTGTCGTGTGCCATGCTTCGCCGTGGGGTGTTCGCGGCTGCAGCAGCTATGACATTTCTGTCATTGGTGTTTTCAATCCTTTACTACTCGATGCACTCAAGAGCCGATACGGGAGGCTGGCAGAAGCATCAGAATGAAGGCGTCGGCATGGTGCCTTCGAATTTTCCCCAAGAAGAGCAGCACGATCGAAGAGCGGGGGAATTCGAGAAGGTTTAG

Protein sequence

MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAFGLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYHTKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVGMVPSNFPQEEQHDRRAGEFEKV

Homology

[Close]

BLAST of Lsi09G006230 vs. ExPASy TrEMBL
Match: A0A0A0KV04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 182/202 (90.10%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MATSLFVIVIIASLHLIAFVFAIGAEMRRSTA VVPD+YDETT+CVYDSDAST YGLVAF
Sbjct: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLIS TVLMVVTRCLCCGKGLRSGGSTVCA+I F++SWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TKYRS LPL NLSCAMLRRGVFAAAAA+TFLSLVFSILYYSMHSRADTGGWQKHQNEG+G
Sbjct: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEKV 203
           M PSN PQ+EQH+RRA EF KV
Sbjct: 181 MGPSNLPQQEQHERRAEEFGKV 202

[Close]

BLAST of Lsi09G006230 vs. ExPASy TrEMBL
Match: A0A1S3CSX8 (uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 180/202 (89.11%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MAT+LFVIVIIASLHLIAFVFAIGAEMRRSTA VVPD+YDETT+CVYDSDAST YGLVAF
Sbjct: 1   MATNLFVIVIIASLHLIAFVFAIGAEMRRSTAEVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLIS TVLMVVTRCLCCGKGL+SGGSTVCA+I F++SWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLKSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TKYRS+LPL NLSCAMLRRGVFAAAAA+TFLSLVFSILYYSMHSRADTGGWQKHQNEG+G
Sbjct: 121 TKYRSSLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEKV 203
           M PSN PQ+E H+RRA EFEKV
Sbjct: 181 MGPSNLPQQELHERRAEEFEKV 202

[Close]

BLAST of Lsi09G006230 vs. ExPASy TrEMBL
Match: A0A6J1FLQ5 (uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC111445108 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.1e-92
Identity = 177/201 (88.06%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MATSL  + IIASLHLIAFVFAIGAEMRRSTATV PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLISHTVLMVVTRCLCCGKGL+SGGSTVCAIILF+VSWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TK+R ALP+KNLSC+MLRRGVFAAAAA+TFLSLVFSILYY  HSRADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEK 202
           MVP +F   EQHDR  G FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGRFEK 201

[Close]

BLAST of Lsi09G006230 vs. ExPASy TrEMBL
Match: A0A6J1JRH3 (uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.9e-91
Identity = 176/201 (87.56%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MATSL  + IIASLHLIAFVFAIGAEMRRSTATV PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLISHTVLMVVTRCLCCGKGL+SGGSTVCAIILF+VSWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TK+R ALP+KNLSC+MLRRGVFAAAAA+TFLSLVFSILYY  HSRADTGGW+KHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWEKHQNEGVG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEK 202
           MVP +F   EQHDR  G FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of Lsi09G006230 vs. ExPASy TrEMBL
Match: A0A6J1DHA0 (uncharacterized protein LOC111020044 OS=Momordica charantia OX=3673 GN=LOC111020044 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.8e-87
Identity = 174/203 (85.71%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MATSL VI IIASLHLIAFV AIGAEMRRSTATVVPDEYDETTHCVYDSDAST YGL AF
Sbjct: 1   MATSLSVIAIIASLHLIAFVLAIGAEMRRSTATVVPDEYDETTHCVYDSDASTAYGLSAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLISHT+LM VTRCLCCGKGL+SGGSTVCAI+LFVVSW  FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTLLMAVTRCLCCGKGLKSGGSTVCAIVLFVVSWSLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNE-GV 180
           TK+R ALP+KNLSC  LR GVFAAAAA+TFLSLVFSILYY  HSRADTGGWQKHQNE GV
Sbjct: 121 TKFRGALPIKNLSCTTLRCGVFAAAAAITFLSLVFSILYYLTHSRADTGGWQKHQNEGGV 180

Query: 181 GMVPSNFPQEEQHDRRAGEFEKV 203
           GMV S+  Q EQHDRR   FEKV
Sbjct: 181 GMVASDIAQHEQHDRRTAGFEKV 203

[Close]

BLAST of Lsi09G006230 vs. NCBI nr
Match: XP_038874260.1 (uncharacterized protein LOC120066990 [Benincasa hispida])

HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97
Identity = 188/202 (93.07%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MATSL VIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETT+CVYDSDASTTYGLVAF
Sbjct: 1   MATSLLVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTYCVYDSDASTTYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLISHTVLMVVTRCLCCGKGL+SGGSTVCAIILFVVSWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFVVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TK+RSAL LKNLSCAMLRRGVFAAAAA+TFLSLVFSILYY+ H+RADTGGWQKHQNEGVG
Sbjct: 121 TKFRSALSLKNLSCAMLRRGVFAAAAALTFLSLVFSILYYTTHARADTGGWQKHQNEGVG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEKV 203
           MVPSN P++EQHDRRA EFEKV
Sbjct: 181 MVPSNLPRQEQHDRRAEEFEKV 202

[Close]

BLAST of Lsi09G006230 vs. NCBI nr
Match: XP_004147116.1 (uncharacterized protein LOC101217379 [Cucumis sativus] >KGN51536.1 hypothetical protein Csa_008005 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 4.6e-95
Identity = 182/202 (90.10%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MATSLFVIVIIASLHLIAFVFAIGAEMRRSTA VVPD+YDETT+CVYDSDAST YGLVAF
Sbjct: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLIS TVLMVVTRCLCCGKGLRSGGSTVCA+I F++SWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TKYRS LPL NLSCAMLRRGVFAAAAA+TFLSLVFSILYYSMHSRADTGGWQKHQNEG+G
Sbjct: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEKV 203
           M PSN PQ+EQH+RRA EF KV
Sbjct: 181 MGPSNLPQQEQHERRAEEFGKV 202

[Close]

BLAST of Lsi09G006230 vs. NCBI nr
Match: XP_008467186.1 (PREDICTED: uncharacterized protein LOC103504596 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 2.3e-94
Identity = 180/202 (89.11%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MAT+LFVIVIIASLHLIAFVFAIGAEMRRSTA VVPD+YDETT+CVYDSDAST YGLVAF
Sbjct: 1   MATNLFVIVIIASLHLIAFVFAIGAEMRRSTAEVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLIS TVLMVVTRCLCCGKGL+SGGSTVCA+I F++SWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLKSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TKYRS+LPL NLSCAMLRRGVFAAAAA+TFLSLVFSILYYSMHSRADTGGWQKHQNEG+G
Sbjct: 121 TKYRSSLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEKV 203
           M PSN PQ+E H+RRA EFEKV
Sbjct: 181 MGPSNLPQQELHERRAEEFEKV 202

[Close]

BLAST of Lsi09G006230 vs. NCBI nr
Match: KAG6579221.1 (hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 177/201 (88.06%), Postives = 186/201 (92.54%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MATSL  + IIASLHLIAFVFAIGAEMRRSTATV PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLISHTVLMVVTRCLCCGKGL+SGGSTVCAIILF+VSWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TK+R ALP+KNLSC+MLRRGVFAAAAA+TFLSLVFSILYY +HSRADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIVHSRADTGGWQKHQNEGVG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEK 202
           MVP +F   EQHDR  G FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of Lsi09G006230 vs. NCBI nr
Match: KAG7016734.1 (hypothetical protein SDJN02_21844 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 177/201 (88.06%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MATSL  + IIASLHLIAFVFAIGAEMRRSTATV PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLATVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYH 120
           GLLLISHTVLMVVTRCLCCGKGL+SGGSTVCAIILF+VSWH FLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGVG 180
           TK+R ALP+KNLSC+MLRRGVFAAAAA+TFLSLVFSILYY  HSRADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPSNFPQEEQHDRRAGEFEK 202
           MVP +F   EQHDR  G FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of Lsi09G006230 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 212.6 bits (540), Expect = 2.9e-55
Identity = 117/206 (56.80%), Postives = 147/206 (71.36%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAF 60
           MA S+ ++ ++ +LHL+AFVFA GAE RRSTA  VPD+YDE T C Y ++AST YG+ AF
Sbjct: 1   MAVSVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAF 60

Query: 61  GLLLISHTVLMVVTRCLCCGKGLRSGGS-TVCAIILFVVSWHFFLGAESLLLAGSVRNAY 120
           GLLL+S  V+  VT+CLC GKGL +G S TV AI+ FVVSW  FLGAE+ LL GS RNAY
Sbjct: 61  GLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAY 120

Query: 121 HTKYRSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKHQNEGV 180
           HTK       K LSCA+L  GVFAA AA T +SL+ +ILYY  HS+ADTGGW+KHQN+G+
Sbjct: 121 HTKSEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKADTGGWEKHQNDGI 180

Query: 181 GM---VPSNFPQEEQHDRRAGEFEKV 203
            +    PS+ P+++       EF KV
Sbjct: 181 NIGMTTPSDAPKQQN-----TEFNKV 201

[Close]

BLAST of Lsi09G006230 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 154.5 bits (389), Expect = 9.4e-38
Identity = 87/172 (50.58%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 4   SLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAFGLL 63
           S  VI+I+  L LIA   AI AE RRS   VVPD   E  HC Y SD +T+YG  AF LL
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 64  LISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYHTKY 123
            IS  ++MV +RC CCGK L+ GGS  C I+LF++ W FFL AE  LLAGS+RNAYHT Y
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTY 122

Query: 124 RSALPLKN-LSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRADTGGWQKH 175
           R    ++N  SC ++R+GVFAA A+    + + S  YY  +SRA  G    H
Sbjct: 123 RRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQTPH 174

[Close]

BLAST of Lsi09G006230 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 144.8 bits (364), Expect = 7.4e-35
Identity = 80/164 (48.78%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 4   SLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAFGLL 63
           S  V++I+  L LIA   AI AE RRS   V  D   +  +CVY +D +T+YG  AF LL
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 64  LISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYHTKY 123
            +S  ++M  +RC CCGK L  GGS  CAIILF++ W FFL AE  LLA S+RNAYHT+Y
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQY 122

Query: 124 RSALPLKN-LSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRA 167
           R    +++  SC ++R+GVFAA AA T  + + S  YY  +SRA
Sbjct: 123 RKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

[Close]

BLAST of Lsi09G006230 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 144.4 bits (363), Expect = 9.7e-35
Identity = 82/163 (50.31%), Postives = 103/163 (63.19%), Query Frame = 0


Query: 4   SLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAFGLL 63
           S  V  I+   +LIAF  A+ AE RRSTA VV D   +  +CVYDSD +T YG+ AF   
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 64  LISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYHTKY 123
           + S  ++M+V+RC CCGK L+ GGS   A+ILF+VSW FFL AE  LLAGSV NAYHTKY
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKY 122

Query: 124 RSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRA 167
           R+        C  LR+GVFAA A+  F + + S  YY  +  A
Sbjct: 123 RTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

[Close]

BLAST of Lsi09G006230 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-30
Identity = 70/163 (42.94%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 4   SLFVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTHCVYDSDASTTYGLVAFGLL 63
           S  V +++ +L L+AF F+I AE RRS    + D    TT CVYDSD +T YG+ AF  L
Sbjct: 7   STLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFL 66

Query: 64  LISHTVLMVVTRCLCCGKGLRSGGSTVCAIILFVVSWHFFLGAESLLLAGSVRNAYHTKY 123
           L S ++LM VT+C+C G+ L  G     +II F+ SW  FL AE+ ++AG+ +NAYHTKY
Sbjct: 67  LSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKY 126

Query: 124 RSALPLKNLSCAMLRRGVFAAAAAMTFLSLVFSILYYSMHSRA 167
            S+   +  SCA LR+G+F A A     ++V ++ YY   +++
Sbjct: 127 LSS---QTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:

BLAST of Lsi09G006230 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi09G006230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV04	2.2e-95	90.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1	[more]
A0A1S3CSX8	1.1e-94	89.11	uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=...	[more]
A0A6J1FLQ5	5.1e-92	88.06	uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JRH3	1.9e-91	87.56	uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148...	[more]
A0A6J1DHA0	3.8e-87	85.71	uncharacterized protein LOC111020044 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Lsi09G006230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874260.1	2.2e-97	93.07	uncharacterized protein LOC120066990 [Benincasa hispida]	[more]
XP_004147116.1	4.6e-95	90.10	uncharacterized protein LOC101217379 [Cucumis sativus] >KGN51536.1 hypothetical ...	[more]
XP_008467186.1	2.3e-94	89.11	PREDICTED: uncharacterized protein LOC103504596 [Cucumis melo]	[more]
KAG6579221.1	1.1e-91	88.06	hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7016734.1	1.1e-91	88.06	hypothetical protein SDJN02_21844 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi09G006230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68220.1	2.9e-55	56.80	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	9.4e-38	50.58	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	7.4e-35	48.78	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	9.7e-35	50.31	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	2.5e-30	42.94	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 59..153 e-value: 4.8E-23 score: 81.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..202
None	No IPR available	PANTHER	PTHR31769:SF63	AEROBIC COPROPORPHYRINOGEN-III OXIDASE (DUF1218)	coord: 3..188
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G006230.1	Lsi09G006230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane