Lsi09G005950 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTCTTATGCATAAAATTAATTTTATTTATGTAATGATTGCAGTTAAGTTTATTTATATAGCAAGCTGCAAACAGCTAAGTTAGCTGCCCACTCTCCTTTTAAAATTATTTTCATTTCTCTCTCTACTCTCTCTCTCTCTCTTCAGGCAACAACAACAACAAAGAAAGAAAGAAAGAGAGAGAGCAGAGAAATTCTTTGTTGCTTTGAAATAATTATGGGTTGTCCTTTCCTTTCACATTGATTTTTCCATCATATTTTCTCGAGAAAATTCTACCCCTTCTGCTCTTATTTTCCCGGAAAATCTGAGATCTCTGTCTCCAGGTTTAAGCTCTGTTTTGGCGGTGGGGGATGAAAAAAAAAACAGAGGCCCCTGTTTTGTGTGTTGTGTAATGCTGGAATTAGTGGGCGGTGAAACAGGGTGTTGCAGCCCGTTGGTGACAGATCCGGCGGCCGGAGATCTAACATTTTTGGATTCAATTTGTAAATCCTGAAACCCAGAAGGAAGGAGAAGAAGGGGGAAGATGCTGAGAACAAAGACTAGTAAAGCCCCACCGGCGGCGCCGACAAATGGCGATTCGAGGGCGATGGAATGGGAAATGAGACCCGGTGGAATGTTGGTTCAGAAGCGAACCGACTCGGATAAAAACTCGGTTGCGCCTCCGATTGTACGAGTCCGAGTCAAGTACGGGTCGGTGTACCATGAAATCTCCATTAGCTCTCAAGCTACTTTCGGTAAATTTCCTACACTTGCGTTTTTTTTTCTTTATTTAGTTTTGCCTTTTTTTCTTCTTTTCTCTTTTTATAAAATTAGTTTGCTTATTACTTGTTGATTTAAAAAACTTTTTGTGTATGGTAATTATTTATGTCATAATTATTATTATTATTTTTTATAAAAAAAATTAAGTTTATATTCTCTCAATTTTCTACTTTGATTTTTATCTTTTTATATTTTATTTTTTAAAATTTAAGTAAAAGAGTTGAATTTTTAGCTCAAATTCTAAAAATAACAACATATTTTTTAAAACTTTTTTGTTTTTTTTTTTGTTTTTTTTTTTTTTTTAAATTTAAGTTTTCAAAATTTGGCTTGTGTTTTTAAAACCTTGGTAGAAAAGCAAGAAATTTATGGGCTTTTGGTCCCCAACTTACCTTGGGTGAGTGGATTATTATAGTCCACTCCATATTTGAGTTTTTTTTATTATAATAGTTGAAATTTCTAATTATTATTACTTACACTTAGATAGAGTAGAACTATTTGAAAAACCTCATTGTTTACTATTTTGTAACCATCTCCTCTTTTCATTTATAATCCAAACTAAAATAATTTGCACTCCAAACATAAATTATTATAACCTACAAGGTATAATAACTAACTTAATGCACCCTATAGCCCATAAGAGGTGAAAGGGATGTTTGAAAGTTTAATTTTCAAAAACTAATAACAAAAAATCAAGACCCCGTTTGGTAATCATTTGGTTTTTGGTTTTTGAAGATTAAGTCTATAATCACCTCTCCCACCTCAAATTTCTTGGATTGTTATCTATTTTTTACCAATGTTTTCAAAAATCAAATTAAATTTTGAAAACTAAAAAAAAGTAGTTTTTGTTTTTAAAATTTGGTTAAGAATATGACTCTTGTACTTAAAAAGATGCAAACCATAGTAAGAAAGTGAGAGGAAATAGGCTTAATTTTTAAAAATTAAAAACAAAAAACGAAATAATTACCAAACAGGACCTTGGTTTTTTAAATTTGTGCATGTTTTCTCCCAATTTCTTACTCACAGTTTTCATATTCCTCATGTAAACATTTGAATTCCTAACAAATTTTCAAAAACAAAAGCAAGTTTTTAAAAACTACTTTTTTTAGCTTTCAAAATATAACTTTCATTTTAAAAGCACTCTTAAAATGTAGACAACAAAACATATAAATCAATGAATGGAAGTGGTGTTTATAAACTTATTTTTCAAAAATAATTACCGAATAGTTATCAAACAGAGGCTTAATCTTTTACGTTTTCACTTAGTATCTTTTTTGTCCGTATATGTTAAAATTGAGGGATGATAAATTTATAATAATCTATATAAATTTAGATGGAAGATTAAGTTATAAAAAAAATCAAAATTTTAAAGATATCTGTGGAATCAGTTACTTTGAATTCAACCAACTCTGTTTGATTTAATTTTTCAATTGTTTGATTTTAAAAATAGGTTATTTTAATTTTTTTTTTGAAGTATTTGACAACCACTCAAAATAACTTTTGAAACACTTTCAAAGTGTATTTTAAACAGTTTTTATCAAAAGAGTTTAAATAAAAAATGACTTTTTTTCAAATAACATTTTTTCTTTAGTCAATCTAAACAGATCTTATATGAGGTGGAAAATCGAACCTCTAATCTACTTACATACTTATGTTAGTCGAGCTATGTTTCTATTGGGTTTGTGAGTTGGAAAATGGCAAAGGTTAAATGGGTAAATTTGCAGGAGAATTGAAGAAAATGTTGGTGGGGGCAACTGGGTTGCACCAAGAAGACCAGAAACTAATATACAAAGAGAAAGAGAGAGATTCAAAGGCATTTTTAGATGTGTGTGGTGTTAAGGATCGTTCCAAAATATTGCTTGTGGAGGACCCAATTAGCCAAGAGAAAAGACTTTTAGAGATGAGAAAAAATGCCAAATTGGAAAAAGCTTCTAAATCCATTTCTCAAATCAGCTTGGAGGTTGATAGACTCGCCGGTCAGGTAAATTATCAATATTACAATATTACAATATTACCCTTGACCGTTAACTTATGTTTTTAAAAACTATCATTATTGGAGTATAAATTTGTTAGAATGTTGGACAAAAATTAGGATTTACAATGGTATAATGATAATTTCCATCCGAAATTCTATTGAGTTTCTACTACAAGGGTAGGTCGTTTAAAACGAATTGAAAAAAATTTAAGGTTATTTTTATTTTTCATAACCGAGCCATTTTCAAATTGGTCTTATTTTTGTTATTCAACCGTAAAAAAAGTTGAACATTGCATTTTTCATTTGATTGTTTAAATAGATAGATAATGTTAAAAGAAAATATAGATAAGAAAAAAAAGAAACCCCATAATTTTTTTAAACATGTAATGACTTTGAATTTGTGTATTGATGTGTCTATATGTATGTATATTAGAGTTACATAAGTTAATTAAGACGAGTATTGGGGGATAGAATCGTAATAAAGATTTTAGTTGATTTCGTCTTAAAAGTTTAGAGATTATTATAGATAGACATATTGAAACTTTTAATAACATTAAAATGGTTGTCTTTTTCAAAAGTCTAAAAGCTAATTGATATCTTGTAAGTTTAGGGGTTAAAATAGAGAAAAACGAAGTTGAAAGACCAATATGCGATTTCAACATTTAACTAAACTCCTCAAAATCTCAATTAAATTTGACAAGGTTATATATAAACGCTTCCAAACTTATTGTTAATTAACGTTTTGTCAACTTAAAATCACTATTTCAATAGACATTTGAACGTATCTCTAATTATTTGTTCACGAATCACATAGGTTTCCGCGCTCGAATCAGTTATTGGCAAAGGTGGAAAAGTTGCTGAGAAAACCGTGTTGAATTTGATTGAATTGCTTATGGATCAATTGCTTAAATTGGATGGAATTATGGGAGATGGAGATGTGAAATTACAGAGGAAGATGCAGGTAAGACTTTGACTTTGACTTTCATTTTCTCAAGAAAAAGCAACAAACTAAACAATGGTTACCTAATAGCTTGATAATTCATGATTTTTAAGGTAAGAAGAGTGCAAAAGTATGTTGAAACTTTAGACATATTGAAGATCAAAAACGAAAACCAAACCCCAATGCAAGTTCAGCAGAGGAGTTCAAATGAGGCGAATCAAGCTCAACTCCAAGTCCAAGCTCAAGCTCAAACTCAAGCCCAAGTCCAAACCTACGATTATCATGGTCAGAAGCCCAATGGACATCGTCCGCAGCCCTCGATGGGGGATTCGTCGTTGGTGCCCGAAAGGAAATCGACATCAGAGACGGTTGTTACGACAAGATGGGAGATATTCGATGCGATGCCACCATTGGTGCCAACCTCATCTTCAACTGCAATCCCAGCAGCAGCAGCCAACAACAACAACAACAACCATGTTCAGCCCAAGTTCAATTGGGAATTTTTTGATTGAAAAATTTTCAAAAGAATTTTATTGTGTATTATTGTCTGATGTGTGATTGAGGTTTGTTACTTCTGTTGGTTTGATTTTTCTTTCTTTCTTTCTTTTTTTCCTCTTCTATTCTTTTGTGTACTTAATTTTGCTAATTAGGATAATACCCTTTGTCATTAAGTTCAATAAATGGGTTTCTTTTTATAGACATTTATCAATCCAACTTGTCTAGGAGTTTGCT ATTTTCTTATGCATAAAATTAATTTTATTTATGTAATGATTGCAGTTAAGTTTATTTATATAGCAAGCTGCAAACAGCTAAGTTAGCTGCCCACTCTCCTTTTAAAATTATTTTCATTTCTCTCTCTACTCTCTCTCTCTCTCTTCAGGCAACAACAACAACAAAGAAAGAAAGAAAGAGAGAGAGCAGAGAAATTCTTTGTTGCTTTGAAATAATTATGGGTTGTCCTTTCCTTTCACATTGATTTTTCCATCATATTTTCTCGAGAAAATTCTACCCCTTCTGCTCTTATTTTCCCGGAAAATCTGAGATCTCTGTCTCCAGGTTTAAGCTCTGTTTTGGCGGTGGGGGATGAAAAAAAAAACAGAGGCCCCTGTTTTGTGTGTTGTGTAATGCTGGAATTAGTGGGCGGTGAAACAGGGTGTTGCAGCCCGTTGGTGACAGATCCGGCGGCCGGAGATCTAACATTTTTGGATTCAATTTGTAAATCCTGAAACCCAGAAGGAAGGAGAAGAAGGGGGAAGATGCTGAGAACAAAGACTAGTAAAGCCCCACCGGCGGCGCCGACAAATGGCGATTCGAGGGCGATGGAATGGGAAATGAGACCCGGTGGAATGTTGGTTCAGAAGCGAACCGACTCGGATAAAAACTCGGTTGCGCCTCCGATTGTACGAGTCCGAGTCAAGTACGGGTCGGTGTACCATGAAATCTCCATTAGCTCTCAAGCTACTTTCGGAGAATTGAAGAAAATGTTGGTGGGGGCAACTGGGTTGCACCAAGAAGACCAGAAACTAATATACAAAGAGAAAGAGAGAGATTCAAAGGCATTTTTAGATGTTTCCGCGCTCGAATCAGTTATTGGCAAAGGTGGAAAAGTTGCTGAGAAAACCGTGTTGAATTTGATTGAATTGCTTATGGATCAATTGCTTAAATTGGATGGAATTATGGGAGATGGAGATGTGAAATTACAGAGGAAGATGCAGGTAAGAAGAGTGCAAAAGTATGTTGAAACTTTAGACATATTGAAGATCAAAAACGAAAACCAAACCCCAATGCAAGTTCAGCAGAGGAGTTCAAATGAGGCGAATCAAGCTCAACTCCAAGTCCAAGCTCAAGCTCAAACTCAAGCCCAAGTCCAAACCTACGATTATCATGGTCAGAAGCCCAATGGACATCGTCCGCAGCCCTCGATGGGGGATTCGTCGTTGGTGCCCGAAAGGAAATCGACATCAGAGACGGTTGTTACGACAAGATGGGAGATATTCGATGCGATGCCACCATTGGTGCCAACCTCATCTTCAACTGCAATCCCAGCAGCAGCAGCCAACAACAACAACAACAACCATGTTCAGCCCAAGTTCAATTGGGAATTTTTTGATTGAAAAATTTTCAAAAGAATTTTATTGTGTATTATTGTCTGATGTGTGATTGAGGTTTGTTACTTCTGTTGGTTTGATTTTTCTTTCTTTCTTTCTTTTTTTCCTCTTCTATTCTTTTGTGTACTTAATTTTGCTAATTAGGATAATACCCTTTGTCATTAAGTTCAATAAATGGGTTTCTTTTTATAGACATTTATCAATCCAACTTGTCTAGGAGTTTGCT ATGCTGAGAACAAAGACTAGTAAAGCCCCACCGGCGGCGCCGACAAATGGCGATTCGAGGGCGATGGAATGGGAAATGAGACCCGGTGGAATGTTGGTTCAGAAGCGAACCGACTCGGATAAAAACTCGGTTGCGCCTCCGATTGTACGAGTCCGAGTCAAGTACGGGTCGGTGTACCATGAAATCTCCATTAGCTCTCAAGCTACTTTCGGAGAATTGAAGAAAATGTTGGTGGGGGCAACTGGGTTGCACCAAGAAGACCAGAAACTAATATACAAAGAGAAAGAGAGAGATTCAAAGGCATTTTTAGATGTTTCCGCGCTCGAATCAGTTATTGGCAAAGGTGGAAAAGTTGCTGAGAAAACCGTGTTGAATTTGATTGAATTGCTTATGGATCAATTGCTTAAATTGGATGGAATTATGGGAGATGGAGATGTGAAATTACAGAGGAAGATGCAGGTAAGAAGAGTGCAAAAGTATGTTGAAACTTTAGACATATTGAAGATCAAAAACGAAAACCAAACCCCAATGCAAGTTCAGCAGAGGAGTTCAAATGAGGCGAATCAAGCTCAACTCCAAGTCCAAGCTCAAGCTCAAACTCAAGCCCAAGTCCAAACCTACGATTATCATGGTCAGAAGCCCAATGGACATCGTCCGCAGCCCTCGATGGGGGATTCGTCGTTGGTGCCCGAAAGGAAATCGACATCAGAGACGGTTGTTACGACAAGATGGGAGATATTCGATGCGATGCCACCATTGGTGCCAACCTCATCTTCAACTGCAATCCCAGCAGCAGCAGCCAACAACAACAACAACAACCATGTTCAGCCCAAGTTCAATTGGGAATTTTTTGATTGA MLRTKTSKAPPAAPTNGDSRAMEWEMRPGGMLVQKRTDSDKNSVAPPIVRVRVKYGSVYHEISISSQATFGELKKMLVGATGLHQEDQKLIYKEKERDSKAFLDVSALESVIGKGGKVAEKTVLNLIELLMDQLLKLDGIMGDGDVKLQRKMQVRRVQKYVETLDILKIKNENQTPMQVQQRSSNEANQAQLQVQAQAQTQAQVQTYDYHGQKPNGHRPQPSMGDSSLVPERKSTSETVVTTRWEIFDAMPPLVPTSSSTAIPAAAANNNNNNHVQPKFNWEFFD Homology
BLAST of Lsi09G005950 vs. ExPASy Swiss-Prot
Match: Q0WUQ1 (BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 3.2e-52 Identity = 143/358 (39.94%), Postives = 186/358 (51.96%), Query Frame = 0
BLAST of Lsi09G005950 vs. ExPASy Swiss-Prot
Match: Q9LYP4 (BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana OX=3702 GN=BAG3 PE=1 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 7.8e-51 Identity = 140/338 (41.42%), Postives = 181/338 (53.55%), Query Frame = 0
BLAST of Lsi09G005950 vs. ExPASy Swiss-Prot
Match: Q0WPX7 (BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana OX=3702 GN=BAG2 PE=1 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.8e-47 Identity = 130/323 (40.25%), Postives = 171/323 (52.94%), Query Frame = 0
BLAST of Lsi09G005950 vs. ExPASy Swiss-Prot
Match: Q8RX71 (BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana OX=3702 GN=BAG4 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20 Identity = 73/215 (33.95%), Postives = 99/215 (46.05%), Query Frame = 0
BLAST of Lsi09G005950 vs. ExPASy TrEMBL
Match: A0A5D3BQA9 (BAG family molecular chaperone regulator 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00310 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 1.3e-112 Identity = 243/344 (70.64%), Postives = 252/344 (73.26%), Query Frame = 0
BLAST of Lsi09G005950 vs. ExPASy TrEMBL
Match: A0A0A0KL80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174560 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.7e-112 Identity = 242/345 (70.14%), Postives = 252/345 (73.04%), Query Frame = 0
BLAST of Lsi09G005950 vs. ExPASy TrEMBL
Match: A0A6J1DNI6 (BAG family molecular chaperone regulator 3-like OS=Momordica charantia OX=3673 GN=LOC111022730 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.7e-101 Identity = 226/348 (64.94%), Postives = 241/348 (69.25%), Query Frame = 0
BLAST of Lsi09G005950 vs. ExPASy TrEMBL
Match: A0A6J1H5G6 (BAG family molecular chaperone regulator 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459760 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 4.4e-97 Identity = 218/344 (63.37%), Postives = 233/344 (67.73%), Query Frame = 0
BLAST of Lsi09G005950 vs. ExPASy TrEMBL
Match: A0A6J1ELL7 (BAG family molecular chaperone regulator 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435748 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 7.0e-95 Identity = 214/337 (63.50%), Postives = 233/337 (69.14%), Query Frame = 0
BLAST of Lsi09G005950 vs. NCBI nr
Match: XP_038874820.1 (BAG family molecular chaperone regulator 3-like [Benincasa hispida]) HSP 1 Score: 438.3 bits (1126), Expect = 4.9e-119 Identity = 248/338 (73.37%), Postives = 258/338 (76.33%), Query Frame = 0
BLAST of Lsi09G005950 vs. NCBI nr
Match: TYK00289.1 (BAG family molecular chaperone regulator 3 [Cucumis melo var. makuwa]) HSP 1 Score: 416.0 bits (1068), Expect = 2.6e-112 Identity = 243/344 (70.64%), Postives = 252/344 (73.26%), Query Frame = 0
BLAST of Lsi09G005950 vs. NCBI nr
Match: XP_004143625.2 (BAG family molecular chaperone regulator 2 [Cucumis sativus]) HSP 1 Score: 399.4 bits (1025), Expect = 2.5e-107 Identity = 229/317 (72.24%), Postives = 237/317 (74.76%), Query Frame = 0
BLAST of Lsi09G005950 vs. NCBI nr
Match: XP_022155653.1 (BAG family molecular chaperone regulator 3-like [Momordica charantia]) HSP 1 Score: 379.0 bits (972), Expect = 3.5e-101 Identity = 226/348 (64.94%), Postives = 241/348 (69.25%), Query Frame = 0
BLAST of Lsi09G005950 vs. NCBI nr
Match: XP_022958564.1 (BAG family molecular chaperone regulator 3-like [Cucurbita moschata]) HSP 1 Score: 364.4 bits (934), Expect = 9.0e-97 Identity = 218/344 (63.37%), Postives = 233/344 (67.73%), Query Frame = 0
BLAST of Lsi09G005950 vs. TAIR 10
Match: AT5G52060.1 (BCL-2-associated athanogene 1 ) HSP 1 Score: 206.8 bits (525), Expect = 2.2e-53 Identity = 143/358 (39.94%), Postives = 186/358 (51.96%), Query Frame = 0
BLAST of Lsi09G005950 vs. TAIR 10
Match: AT5G07220.1 (BCL-2-associated athanogene 3 ) HSP 1 Score: 202.2 bits (513), Expect = 5.5e-52 Identity = 140/338 (41.42%), Postives = 181/338 (53.55%), Query Frame = 0
BLAST of Lsi09G005950 vs. TAIR 10
Match: AT5G62100.2 (BCL-2-associated athanogene 2 ) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-48 Identity = 130/323 (40.25%), Postives = 171/323 (52.94%), Query Frame = 0
BLAST of Lsi09G005950 vs. TAIR 10
Match: AT5G62100.1 (BCL-2-associated athanogene 2 ) HSP 1 Score: 182.6 bits (462), Expect = 4.5e-46 Identity = 130/334 (38.92%), Postives = 171/334 (51.20%), Query Frame = 0
BLAST of Lsi09G005950 vs. TAIR 10
Match: AT5G62100.3 (BCL-2-associated athanogene 2 ) HSP 1 Score: 159.5 bits (402), Expect = 4.1e-39 Identity = 94/195 (48.21%), Postives = 120/195 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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