Lsi09G004240 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G004240
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pectinesterase
Location	chr09: 4495920 .. 4501836 (+)
RNA-Seq Expression	Lsi09G004240
Synteny	Lsi09G004240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGCCCTTATTTATAGATTCGCAAAACATTCCCAAATTCCCCCAAAGAAAAAACCCTCTCTCTCTCTAAAATGGCATTCTATTTTCCCTCATTTTTCTTCTTCACTTTCTTTCTTCTATGCTTTTCCGCCGCCGCCAAGCACCGCCACCACTGGGTCGGACCCAACGGGCACCGCCTGATCAAAGTGAACGTTAACGGCGGCTCCGATGAGTTTCTCTCCGTACAAGCCGCCGTGGATGCAGTTCCTGATTACAATACCGTCAACACCGTCATCCGAATTAGCCCTGGATATTACGTGTAATGCTCTCTTTTTCTTCTTAATTATAAACATTCATCATTTCAATAATAATAATAATAATAATAATTCACATTTTATCTTTTTTTTTTTTCTTTTAATAACTTTTGCTTTACGTATAAATCTTTCCCTCTTTTTTTAGAAACTTTCCCCAAACGCCTTGTTCGAAATTTTTTCTCCCCTTTCAATTTTTGTTTTTATAATTTTGTTTTTATTTTAAAATTATGGAATATAATATTATTCCTTCTTCTATTCTCTTTCTTTTCACTCTTCTTCGCCTATAAGCTTCCGAATTAGCTCGTGCTCTTAAAATAATACTTACTTTATCCTATTCACTGAGGGGTCGCCATTAGATTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAAATTTTAAATTCTAATCCATAAAATTTTAAATTAAAATTTAATTCCTATAGTTTAATAAAACTTTAGATACTTGAATTATAATTATAAGACTATTTAGGAGTATTTTATCAAATCATAAAAATTAAATTCTAGATCGAATTTGTAATTTAATTTTTTATTATTATAAGATTCTTGAATTTTATAATTAAAAGAAAAATAGAAGCCAAATATTTTCTTCTTCCGTTGCATTCCTCACTTAAGAAAAAAAAATAGTGTAATCTAGGCAACACTCATTTATCGTGCAGTCCAGACAACACTCAATAAAAATCTGTCATGTATAAAAAATATTTAATTTTTGTTCTATCATGTATAAAAAATGGGATAATGAGATTAAACGTAGTCTATGTTGCACCTAATCATTGTCCTTCCTAACAACGAAATAAAATTAACAAAGCAAGTGTTAGTATTTGTTTAATTAAAAGAAAAAATATATATATTTGTATGTCTTTGGCTACACTCATTTTTTACCGTCTAACATAGTGGTCCAACTACCGTTTTAAAAACTATTTTAATTTTTTTTCTTCATTATGTAATTAGAATAGGTGGTAAAAGAAAAAAGACATAGGCAATTCAAATATTACTCTTAAAAATGTATTCTTTTGGAGATATAATAAATTCTTTATATTTATTAAAATATGCTTAAATTTGTGGAAAATTTTCATAAATAAAAAAAATGTCAAACTATTTACATAAAATAGCAAAAAAAATACTGATAGACATTAATAGACTTCTATCAGCATCTATCAATGATAGACTTCTATCATTTCTATCATTGATAGATCCTGATAGACTTCTATCAGTGTCTATCACAACTATTTAAAAATTTTGCTATTTTGTATAAATAGTTTGCCTTATTTTTCTATTTTTAAAACTTTCCCTAAATTTGTGTTAAACCTCTAGAATAATTTATATAATAAACACAAAAGATAATAATGTAAGAGGGATTATTATAGTAAAATGAATGGTTTAATTATATTAATTAATGCAGGGAGAAGGTGGTGGTGCCGGCGACGAAGCCGTACATAACATTTGAAGGTGGAGGAAAAGAGACGACGGTGATAGAATGGCACGACCGGGCAGGTGACCGTGGTCCCAGCGGGCAGCAGCTCCGTACTTACAGAACAGCCTCCGTTACCGTTTTTGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAAGGTAAATCAATTACCCCACCATAATCTTTCCAACTTTCCTGCACGTGAACTTCCCCTATAATATTCCAAAATAATAATAATAATAATAATAATAATAATAATAATAATACTTTATCCAATTTTAACTTCTCTATTTTTAATGTGTTTTTCTTTATACTCTCAATTTTTCTTTTTAATTTAGTTAGGTATATCATTTATTTTTTTATTATTGGTTAACATTTTCACTATAAATTTTGAAAACATATTTACATATTATAATTTCTCACAAAATTGTATCTTAAATTATTATTAAGATTTATTGAATATAATACATAGACTAAAATTAGACATTTGAAAGTATAGAGACTAAAATTAAACAAACTCTAAAGTATAGGGGCAAAATGCTATGTTAAAAAAAAAAAAAAGAGTTTATTTCTTTGTATTTCAATTTTGAAAATTAAAATATGCAATAAACTAACTATAGGACTAATTTTAAGATTATTGAAAGTATACAAATTAAAATTCGACATTTGAAAATATAAGGACTACCTGAATATATTTTCACATTTATAGAGACTACTTTTTTTATAAAAAAAAATCTATAATAAAAATAGACCAAAATAGAATGAAGTATAGAGAGCAAAATGATATTTTATTAAGAAAAATTTTTAAACATAGAAAAAATGTCAAACTATTTACAGAAAATAAAAAAAAAACACCCATAGATATTGATGGACTTCTATCAGCATCTTTCAGTGATCGACTTCTATTATATCTATCACTGATAGATCCTAATAGGCTTCTATCAGCGTTTATCACAACTATCTAAAAATTTTATAAATAATTTCTTTTATTTTTTTATTTTTAAAAATTCTCCATTTATTGTTTCTCCTTTTTTCTATAGTGTTGGGGTTTGCTATAATATAATCGTTAAAGGTTTTGGTTTTTCTTTTTTTTGTTTTCAATTCAATCTTTATCATTTAAAAAGTTTAAGTTTAGTTCTCAATATTTTAACATTTTAAATTATGAAATTCTTGTTGATAAATGTTTAAAGTGCTTATGGCAGGACATTTGCCGAGTTTGTATAAGTTAAAAAAAATTAAAGAAAATTAAGGGAGTATAATTACATTTCTAAATAAATAATTGAAAAACGCTCAAATATTATTTGGGGTCAAAGATAGATGCTTTTTAGCTATGAATTTATTTGATCAATTTATAGTTGGGAAAGAAAATAGTTTTGATTTTAACACATAGAAACAACAAAAAAATAATTATTAATTAATGACCTGACTTGTTTCTCTGATTTTGTTCTGAATTTTTTTTAGCCTTTTCCAAGATGTTTCATTTAACTTATTAAAAGAATATAAACAAAAAAGTACTTTCTTCTTGAAATAAGATAATGATTATGATAATAAAATGCACTTAACAAATTAAGAGGTTCTTATGAATTAGAAATCTTAGTCATAAGATAAGACAACTAACCAGCTTCTTTTACCAGTACAAAGTGCTTTTACTTAATTTATTCATACTATATTTGATAATTAAGTGGACTCTTTTGGATTTGTTTAATGATAATAATAATTTTCATAATATGTGAATATATTTATTAAGTTTATAGAAAAAATGTTAATAGATAATTAAGAAAAAATCAATAATAAAACTAAAGGTATGATTTATTAAAAATACAAATATTAAAATTAAACATTTAAAGTACTAAGACCAAAATTGAACAAGTTTCAAATCAGGGAGACCAAAATGATCTTTTAACATATTAACTACTTTCTTTTAAAAAGTCAGCTAAATTAAAAGCTAAGCCCTAAACTTTGATGTTTATATATTTTTTTCATCTCTAAACTTTCGAAAATATCTAATAAACTTATAAATTTTTAATTTAGTGTCTAAAAAATCTGTAAACTTTCGATTTTAATAGGTCTTTCAAATAGATCTAGAAAGGAAGAAAAGATGTTATTGTAGATTTAACACGTCTAATATTAATTAATTGTATATTAAGAAATCAAGACTTCCTTTCCTAAATTTTCAAAATTAAATGATTAGGAACATTTTGTGATCCCTACTTTAATATTTAAAAAAAAATCAAGAAAATGATGAAGAAATATAAACATAAAATGTAGTGATTTTGTAAATGATATTTGGTTTTCACGTGACGGCAGAATACGGCACCGGCGCCGCTGCCCGGAATGCAAGGGTGGCAGGCGGCGGCGTTTCGAATCTCCGGCGATAAAGCCTACTTTTCCGGCTGCGGATTCTACGGCGCACAAGATACGCTCTGCGACGACGCCGGCCGCCATTACTTCAAAGAATGCTACATCGAAGGCTCCATAGACTTCATCTTTGGAAATGGCCGTTCCATGTATAAGGTATTCTAATTTTAATTCTCCCTTATTCTTTTTTTATTTCAATAAAAATTGTATTCTGTTTAATTAGTTCTAATTTCTATTTTAATTAGGACAAAAACATAACTCAACTCACATAAAATTTGTATTATTGACCTCGAGGTCCAATGTTTGATTCTCCCACCCCACGTATTGTAGAAAAAATCGGTAATTTAAAAAAAAAATTGTATAAAAATAGTTTAATTACAAAATTGGTCCTTATAGTCTTGATAATGTTAGAATTTAGTTCTTATAGTTTAAAAATCATAATTCATGTATCTATATGACAGTAGAAACTATTTTTTAAGATTTTATCAAATTGGAGGCTACATTTGTAATTTTAGTCCAAATATAGGGATTAAATTCACATGTTAATTGAATATATCTATGCAGACATAAATTTGAGCCCTATGTATTGTCTCAGTCAAGTGGTAAATATTATAGGGGTTAACCTTTTTAAAAGTTTTTTCGAGAAAAAAAAACTTCTAAAAAGTAATATTTATAATAGAGTTGTTTTTTAAAGTAATGATTGAAAATAGGTTAATTTAACTAAATTTTGTGATCAAACTCATTAACCTATCGTTAAAATAGGCCACTTTCCCATAATGACTATTTTTGCCTTTAGACGTGTAAAAAATAATAACTTTATTTCAAAAATTATTTTTGAATTAAATTATTCCCAATCGTGGCAATATAATAGCATATATCAAAATATTTAGGGTTTTGGTTTTTCTAAATGAAAATACTAAAATTTTTATTTATAAATATTTTGAAAATTTGATGGAATCAAATTATATTTAAACCTTTAAATTAAAATGAATAACAAAGTCCTTAAACGGCAACATTTCCTGTCTTCTCCTTCGTGATGTAGGATTGTGTGCTGCACTCGATCGCCACCCGGTTCGGTTCCATAGCAGCCCAAGATAGAAACTCGCCGTACGAGAAGACCGGGTTCGCGTTTGTCCGGTGCAAGGTGACCGGTTCAGGACCCGTGTACGTGGGACGAGCCATGGGCCAGTACTCCAGAATCGTCTATGCGTATACTTACTTTGATGACGTGGTGGCCCACGGTGGGTGGGATGACTGGGACCACGTCAGCAACAAAAACAAGTAAGAAAAAACAAATGGGCTGGACTTACACATTGGCCTGTGATCTTGGGCCCAGAGCCCATGATGCTAACTAGGTTTTTTTATTTATTTAAAAGAAGGAAAAATGTATTTTTATGGGTTTTTTCAATTGGTTAATTTTAAATTTTTTGAGTGGTGCAGGACAGTATTTTTTGGAGTATACAAGTGCTGGGGGCCAGGGGCAAGTAAAGTAAAGGGAGTATCATGGGCCAGGGAGTTGGAGTTTGAAGAGGCCCATCCATTTCTTGCCCAGAGCTTTGTCAATGGCAGACACTGGATTGCACCCTCTGATGCTTAGATACCTCTCCAATGCAATTCTTCATACTATATATATATATATATATATTTATTCATTTCTAAATATTTATTACATTCATTCCATTTGTACTCCAGAATAATACTCTTTTTT

mRNA sequence

ATCGCCCTTATTTATAGATTCGCAAAACATTCCCAAATTCCCCCAAAGAAAAAACCCTCTCTCTCTCTAAAATGGCATTCTATTTTCCCTCATTTTTCTTCTTCACTTTCTTTCTTCTATGCTTTTCCGCCGCCGCCAAGCACCGCCACCACTGGGTCGGACCCAACGGGCACCGCCTGATCAAAGTGAACGTTAACGGCGGCTCCGATGAGTTTCTCTCCGTACAAGCCGCCGTGGATGCAGTTCCTGATTACAATACCGTCAACACCGTCATCCGAATTAGCCCTGGATATTACCCGTACATAACATTTGAAGGTGGAGGAAAAGAGACGACGGTGATAGAATGGCACGACCGGGCAGGTGACCGTGGTCCCAGCGGGCAGCAGCTCCGTACTTACAGAACAGCCTCCGTTACCGTTTTTGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAAGAATACGGCACCGGCGCCGCTGCCCGGAATGCAAGGGTGGCAGGCGGCGGCGTTTCGAATCTCCGGCGATAAAGCCTACTTTTCCGGCTGCGGATTCTACGGCGCACAAGATACGCTCTGCGACGACGCCGGCCGCCATTACTTCAAAGAATGCTACATCGAAGGCTCCATAGACTTCATCTTTGGAAATGGCCGTTCCATGTATAAGGATTGTGTGCTGCACTCGATCGCCACCCGGTTCGGTTCCATAGCAGCCCAAGATAGAAACTCGCCGTACGAGAAGACCGGGTTCGCGTTTGTCCGGTGCAAGGTGACCGGTTCAGGACCCGTGTACGTGGGACGAGCCATGGGCCAGTACTCCAGAATCGTCTATGCGTATACTTACTTTGATGACGTGGTGGCCCACGGTGGGTGGGATGACTGGGACCACGTCAGCAACAAAAACAAGACAGTATTTTTTGGAGTATACAAGTGCTGGGGGCCAGGGGCAAGTAAAGTAAAGGGAGTATCATGGGCCAGGGAGTTGGAGTTTGAAGAGGCCCATCCATTTCTTGCCCAGAGCTTTGTCAATGGCAGACACTGGATTGCACCCTCTGATGCTTAGATACCTCTCCAATGCAATTCTTCATACTATATATATATATATATATATTTATTCATTTCTAAATATTTATTACATTCATTCCATTTGTACTCCAGAATAATACTCTTTTTT

Coding sequence (CDS)

ATGGCATTCTATTTTCCCTCATTTTTCTTCTTCACTTTCTTTCTTCTATGCTTTTCCGCCGCCGCCAAGCACCGCCACCACTGGGTCGGACCCAACGGGCACCGCCTGATCAAAGTGAACGTTAACGGCGGCTCCGATGAGTTTCTCTCCGTACAAGCCGCCGTGGATGCAGTTCCTGATTACAATACCGTCAACACCGTCATCCGAATTAGCCCTGGATATTACCCGTACATAACATTTGAAGGTGGAGGAAAAGAGACGACGGTGATAGAATGGCACGACCGGGCAGGTGACCGTGGTCCCAGCGGGCAGCAGCTCCGTACTTACAGAACAGCCTCCGTTACCGTTTTTGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAAGAATACGGCACCGGCGCCGCTGCCCGGAATGCAAGGGTGGCAGGCGGCGGCGTTTCGAATCTCCGGCGATAAAGCCTACTTTTCCGGCTGCGGATTCTACGGCGCACAAGATACGCTCTGCGACGACGCCGGCCGCCATTACTTCAAAGAATGCTACATCGAAGGCTCCATAGACTTCATCTTTGGAAATGGCCGTTCCATGTATAAGGATTGTGTGCTGCACTCGATCGCCACCCGGTTCGGTTCCATAGCAGCCCAAGATAGAAACTCGCCGTACGAGAAGACCGGGTTCGCGTTTGTCCGGTGCAAGGTGACCGGTTCAGGACCCGTGTACGTGGGACGAGCCATGGGCCAGTACTCCAGAATCGTCTATGCGTATACTTACTTTGATGACGTGGTGGCCCACGGTGGGTGGGATGACTGGGACCACGTCAGCAACAAAAACAAGACAGTATTTTTTGGAGTATACAAGTGCTGGGGGCCAGGGGCAAGTAAAGTAAAGGGAGTATCATGGGCCAGGGAGTTGGAGTTTGAAGAGGCCCATCCATTTCTTGCCCAGAGCTTTGTCAATGGCAGACACTGGATTGCACCCTCTGATGCTTAG

Protein sequence

MAFYFPSFFFFTFFLLCFSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYYPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA

Homology

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BLAST of Lsi09G004240 vs. ExPASy Swiss-Prot
Match: Q8LPF3 (Probable pectinesterase 68 OS=Arabidopsis thaliana OX=3702 GN=PME68 PE=2 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 6.9e-144
Identity = 241/345 (69.86%), Postives = 277/345 (80.29%), Query Frame = 0


Query: 10  FFTFFLLCF-------------SAAAKHRHH--WVGPNGHRLIKVNVNGGSDEFLSVQAA 69
           F +F  LCF                 +H HH  WVGP+GH++I V++NG + +F SVQ A
Sbjct: 19  FVSFHCLCFRFSLVAACSNSTDDQQIQHHHHRKWVGPSGHKVITVSLNGHA-QFRSVQDA 78

Query: 70  VDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQ 129
           VD++P  N  +  I+I+PG+Y          PYITF+G G++ T IEWHDRA D G +GQ
Sbjct: 79  VDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQ 138

Query: 130 QLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGA 189
           QLRTY+TASVTV+ANYF+ARNISF NTAPAPLPGMQGWQA AFRISGDKA+FSGCGFYGA
Sbjct: 139 QLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGA 198

Query: 190 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKT 249
           QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC LHSIA+RFGSIAA  R  P EKT
Sbjct: 199 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRTCPEEKT 258

Query: 250 GFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGV 309
           GFAFV C+VTG+GP+YVGRAMGQYSRIVYAYTYFD +VAHGGWDDWDH SNK+KT FFGV
Sbjct: 259 GFAFVGCRVTGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGV 318

Query: 310 YKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           Y C+GPGA+  +GVSWAR L++E AHPF+A+SFVNGRHWIAP DA
Sbjct: 319 YNCYGPGAAATRGVSWARALDYESAHPFIAKSFVNGRHWIAPRDA 362

[Close]

BLAST of Lsi09G004240 vs. ExPASy Swiss-Prot
Match: Q8VYZ3 (Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.5e-79
Identity = 142/298 (47.65%), Postives = 192/298 (64.43%), Query Frame = 0


Query: 37  IKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKE 96
           + V+      +F  +Q A+D++P  N V  VI++  G Y           +IT EG G E
Sbjct: 85  LTVHKKSNKGDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAE 144

Query: 97  TTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAA 156
            T +EW D A      G  + TY +AS  V + +F A+NI+F+NT P PLPG  G QA A
Sbjct: 145 KTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVA 204

Query: 157 FRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIA 216
            R+S D A F GC   GAQDTL D  GRHY+K+CYIEGS+DFIFGN  S+Y+ C +H+IA
Sbjct: 205 LRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIA 264

Query: 217 TRFGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGG 276
            + G++ AQ R+S  E TGF+FV+CKVTG+G +Y+GRA G +SR+V+AYTY D+++   G
Sbjct: 265 DKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRG 324

Query: 277 WDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWI 325
           W +W   S +  TVF+G YKC G GA+    V+WAREL  EEA PFL+ +F++G  WI
Sbjct: 325 WYNWGDPS-REMTVFYGQYKCTGAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWI 381

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BLAST of Lsi09G004240 vs. ExPASy Swiss-Prot
Match: Q9FM79 (Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 9.9e-74
Identity = 147/327 (44.95%), Postives = 196/327 (59.94%), Query Frame = 0


Query: 19  SAAAKHRHHWVGPNGH---------RLIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIR 78
           S + K   +WV  N +         R+I V+ NGG D  ++VQ AVD VPD N+    I 
Sbjct: 55  SFSIKENSNWVTTNANANANATNVRRVIVVDKNGGGDS-VTVQGAVDMVPDSNSQRVKIF 114

Query: 79  ISPGYY----------PYITFEGGGKET--TVIEWHDRAGDRGPSGQQLRTYRTASVTVF 138
           I PG Y          PYI+F G       TVI W D+A D G  G++L TYRTASV++ 
Sbjct: 115 ILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIE 174

Query: 139 ANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYF 198
           +++F A  I+F+NT  A   G QG QA A RI GDKA F      G+QDTL DD G HYF
Sbjct: 175 SDFFCATAITFENTVVAE-AGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYF 234

Query: 199 KECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAFVRCKVTGSG 258
            +CYI+G++DFIFGN +S+Y+DC +HS A R+G+IAA  R+S  E TGF+FV C ++G+G
Sbjct: 235 YQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYGAIAAHHRDSETEDTGFSFVNCDISGTG 294

Query: 259 PVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKG 318
            +Y+GRA G YSR VY+  +  D++   GW DW H   + K V FG Y C G GA +   
Sbjct: 295 QIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRK-VMFGEYNCRGRGAERGGR 354

Query: 319 VSWARELEFEEAHPFLAQSFVNGRHWI 325
           V W++ L  +E  PFL + F+ G  W+
Sbjct: 355 VPWSKTLTRDEVKPFLGREFIYGDQWL 378

[Close]

BLAST of Lsi09G004240 vs. ExPASy Swiss-Prot
Match: Q9ZQA3 (Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.3e-70
Identity = 138/296 (46.62%), Postives = 184/296 (62.16%), Query Frame = 0


Query: 44  GSDEFLSVQAAVDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWH 103
           G   F +VQ+A+D VPD ++  T+I ++ G Y            +  +G G + T IEW+
Sbjct: 97  GCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWN 156

Query: 104 DRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDK 163
           D A   G       T  + S  VFA  F+A NISFKN AP P PG    QA A RI GD+
Sbjct: 157 DTAKSAG------NTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQ 216

Query: 164 AYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATR----- 223
           A F GCGFYGAQDTL DD GRH+FKEC+I+GSIDFIFGNGRS+Y+DC ++SIA       
Sbjct: 217 AAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGV 276

Query: 224 FGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWD 283
            GSI AQ R S  E++GF+FV CK+ GSG + +GRA G Y+ +V++ TY   ++   GW+
Sbjct: 277 TGSITAQGRQSEDEQSGFSFVNCKIDGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWN 336

Query: 284 DWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWI 325
           +W   S K KTV FG +KC+GPGA   + V + ++L   EA  F+  SF++G  W+
Sbjct: 337 NWGD-STKEKTVTFGEHKCYGPGADYKERVLFGKQLTDSEASSFIDVSFIDGDEWL 385

[Close]

BLAST of Lsi09G004240 vs. ExPASy Swiss-Prot
Match: Q9ZQA4 (Putative pectinesterase 14 OS=Arabidopsis thaliana OX=3702 GN=PME14 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-65
Identity = 134/301 (44.52%), Postives = 183/301 (60.80%), Query Frame = 0


Query: 36  LIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYY----------PYITFEGGGK 95
           ++KV++N G   F  VQ A+DA    +   T+I I  G Y            +  +G G 
Sbjct: 41  VLKVSLN-GCGRFKRVQDAIDASIGSSQSKTLILIDFGIYRERFIVHENKNNLVVQGMGY 100

Query: 96  ETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAA 155
             T IEW++             T+ + SV VF   F+A NISFKNTAPAP PG    QA 
Sbjct: 101 SRTSIEWNNTTASSN------GTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAV 160

Query: 156 AFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSI 215
           A ++ GDKA F GCGFYG QDTL D  GRH+FK C+IEGSIDFIFGNGRS+Y+DC LHSI
Sbjct: 161 ALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSI 220

Query: 216 A--TRFGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVA 275
           A     G I A  +++  ++TGF FV CK+TGS  V++GRA   Y+R++++ TY   VV+
Sbjct: 221 AKENTIGCITANGKDTLKDRTGFVFVNCKITGSARVWLGRAWRPYARVIFSKTYMSRVVS 280

Query: 276 HGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHW 325
             GW+D      + +TV++G ++C+GPGA+  K V++A+ L   EA PF   SF++G  W
Sbjct: 281 LDGWNDMGDPKTQ-RTVYYGEHRCYGPGANHSKRVTYAKLLSDVEAAPFTNISFIDGEEW 333

[Close]

BLAST of Lsi09G004240 vs. ExPASy TrEMBL
Match: A0A5A7T9Y3 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00500 PE=4 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 3.2e-184
Identity = 312/341 (91.50%), Postives = 322/341 (94.43%), Query Frame = 0


Query: 1   MAFYF-PSFFFFTFFLLC-FSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAAVDAV 60
           MAF F  SFFFFTFFLLC FSAAA H HHWVGP GHRLIKVNVNGGSD FLSVQAAVD++
Sbjct: 1   MAFLFVHSFFFFTFFLLCFFSAAANHLHHWVGPTGHRLIKVNVNGGSDVFLSVQAAVDSI 60

Query: 61  PDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRT 120
           PDYNTVNT+IRISPGYY          PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRT
Sbjct: 61  PDYNTVNTIIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRT 120

Query: 121 YRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTL 180
           YRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTL
Sbjct: 121 YRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTL 180

Query: 181 CDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAF 240
           CDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP+EKTGFAF
Sbjct: 181 CDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPHEKTGFAF 240

Query: 241 VRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCW 300
           +RCKVTGSGP+YVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCW
Sbjct: 241 LRCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCW 300

Query: 301 GPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           GPGASKVKGVSWA+ELE++EAHPFLA+SFVNGRHWIAPSDA
Sbjct: 301 GPGASKVKGVSWAKELEYKEAHPFLAKSFVNGRHWIAPSDA 341

[Close]

BLAST of Lsi09G004240 vs. ExPASy TrEMBL
Match: A0A0A0KP96 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G162010 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.3e-181
Identity = 306/336 (91.07%), Postives = 315/336 (93.75%), Query Frame = 0


Query: 4   YFPSFFFFTFFLLCFSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAAVDAVPDYNT 63
           +  SFFF TFFLLCFSAAA   HHW+GP GHRLIKVNV GGSD FLSVQAAVD+VPDYNT
Sbjct: 5   FLHSFFFSTFFLLCFSAAA--NHHWIGPTGHRLIKVNVKGGSDVFLSVQAAVDSVPDYNT 64

Query: 64  VNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTAS 123
           VNT+IRISPGYY          PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTAS
Sbjct: 65  VNTIIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTAS 124

Query: 124 VTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAG 183
           VTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAG
Sbjct: 125 VTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAG 184

Query: 184 RHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAFVRCKV 243
           RHYFKECYIEGSIDFIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP EKTGFAF+RCKV
Sbjct: 185 RHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPIEKTGFAFLRCKV 244

Query: 244 TGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGAS 303
           TGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGAS
Sbjct: 245 TGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGAS 304

Query: 304 KVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           KVKGVSWA+ELE++EAHPFLA+SFVNGRHWIAPSDA
Sbjct: 305 KVKGVSWAKELEYKEAHPFLAKSFVNGRHWIAPSDA 338

[Close]

BLAST of Lsi09G004240 vs. ExPASy TrEMBL
Match: A0A1S3AUB3 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103483059 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 4.0e-179
Identity = 296/322 (91.93%), Postives = 306/322 (95.03%), Query Frame = 0


Query: 18  FSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYY-- 77
           FSAA  H HHWVGP GHRLIKVNVNGGSD FLSVQAAVD++PDYNTVNT+IRISPGYY  
Sbjct: 32  FSAATNHLHHWVGPTGHRLIKVNVNGGSDVFLSVQAAVDSIPDYNTVNTIIRISPGYYVE 91

Query: 78  --------PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNIS 137
                   PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNIS
Sbjct: 92  KVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNIS 151

Query: 138 FKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSID 197
           FKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSID
Sbjct: 152 FKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSID 211

Query: 198 FIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQ 257
           FIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP+EKTGFAF+RCKVTGSGP+YVGRAMGQ
Sbjct: 212 FIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPHEKTGFAFLRCKVTGSGPIYVGRAMGQ 271

Query: 258 YSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFE 317
           YSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWA+ELE++
Sbjct: 272 YSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWAKELEYK 331

Query: 318 EAHPFLAQSFVNGRHWIAPSDA 330
           EAHPFLA+SFVNGRHWIAPSDA
Sbjct: 332 EAHPFLAKSFVNGRHWIAPSDA 353

[Close]

BLAST of Lsi09G004240 vs. ExPASy TrEMBL
Match: A0A6J1E808 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111430254 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 7.6e-178
Identity = 306/345 (88.70%), Postives = 313/345 (90.72%), Query Frame = 0


Query: 1   MAFYFPSFFFF------TFFLLCFSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAA 60
           M F   SFFFF       FFLL  +AA  HRHHWVGP GHRLIKV+VNG S EFLSVQAA
Sbjct: 1   MTFSLNSFFFFFFISVPAFFLL--AAAKHHRHHWVGPTGHRLIKVDVNGISGEFLSVQAA 60

Query: 61  VDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQ 120
           VDAVPDYNTVNT+IRISPGYY          PYITFEGGGKETTVIEWHDRAGDRGPSGQ
Sbjct: 61  VDAVPDYNTVNTLIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQ 120

Query: 121 QLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGA 180
           QLRTYRTASVTVFANYFSARNISFKNTAPAP+PGMQGWQAAAFRISGDKAYFSGCGFYGA
Sbjct: 121 QLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGA 180

Query: 181 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKT 240
           QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP EKT
Sbjct: 181 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPNEKT 240

Query: 241 GFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGV 300
           GFAFVRCKVTGSGP+YVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDH SNKNKTVFFGV
Sbjct: 241 GFAFVRCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHTSNKNKTVFFGV 300

Query: 301 YKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           YKCWGPGASKVKGVSWA+ELEFEEAHPFL +SFVNGRHWIAPSDA
Sbjct: 301 YKCWGPGASKVKGVSWAKELEFEEAHPFLVKSFVNGRHWIAPSDA 343

[Close]

BLAST of Lsi09G004240 vs. ExPASy TrEMBL
Match: A0A6J1I193 (Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111468960 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.4e-176
Identity = 304/344 (88.37%), Postives = 312/344 (90.70%), Query Frame = 0


Query: 1   MAFYFPSFFFF-----TFFLLCFSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAAV 60
           MAF   SFFFF      FFLL  +AA  HRHHWVG  GHRLIKV+V G S EF+SVQAAV
Sbjct: 1   MAFSLTSFFFFFISVPAFFLL--AAAKHHRHHWVGHTGHRLIKVDVKGISGEFVSVQAAV 60

Query: 61  DAVPDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQQ 120
           DAVPDYNTVNT+IRISPGYY          PYITFEGGGKETTVIEWHDRAGDRGPSGQQ
Sbjct: 61  DAVPDYNTVNTLIRISPGYYVEKVVVPAKKPYITFEGGGKETTVIEWHDRAGDRGPSGQQ 120

Query: 121 LRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQ 180
           LRTYRTASVTVFANYFSARNISFKNTAPAP+PGMQGWQAAAFRISGDKAYFSGCGFYGAQ
Sbjct: 121 LRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQ 180

Query: 181 DTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTG 240
           DTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP EKTG
Sbjct: 181 DTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPNEKTG 240

Query: 241 FAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVY 300
           FAFVRCKVTGSGP+YVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDH SNKN+TVFFGVY
Sbjct: 241 FAFVRCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHTSNKNQTVFFGVY 300

Query: 301 KCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           KCWGPGASKVKGVSWARELEFEEAHPFL +SFVNGRHWIAPSDA
Sbjct: 301 KCWGPGASKVKGVSWARELEFEEAHPFLVKSFVNGRHWIAPSDA 342

[Close]

BLAST of Lsi09G004240 vs. NCBI nr
Match: KAA0039718.1 (putative pectinesterase 68 [Cucumis melo var. makuwa])

HSP 1 Score: 654.1 bits (1686), Expect = 6.6e-184
Identity = 312/341 (91.50%), Postives = 322/341 (94.43%), Query Frame = 0


Query: 1   MAFYF-PSFFFFTFFLLC-FSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAAVDAV 60
           MAF F  SFFFFTFFLLC FSAAA H HHWVGP GHRLIKVNVNGGSD FLSVQAAVD++
Sbjct: 1   MAFLFVHSFFFFTFFLLCFFSAAANHLHHWVGPTGHRLIKVNVNGGSDVFLSVQAAVDSI 60

Query: 61  PDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRT 120
           PDYNTVNT+IRISPGYY          PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRT
Sbjct: 61  PDYNTVNTIIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRT 120

Query: 121 YRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTL 180
           YRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTL
Sbjct: 121 YRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTL 180

Query: 181 CDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAF 240
           CDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP+EKTGFAF
Sbjct: 181 CDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPHEKTGFAF 240

Query: 241 VRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCW 300
           +RCKVTGSGP+YVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCW
Sbjct: 241 LRCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCW 300

Query: 301 GPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           GPGASKVKGVSWA+ELE++EAHPFLA+SFVNGRHWIAPSDA
Sbjct: 301 GPGASKVKGVSWAKELEYKEAHPFLAKSFVNGRHWIAPSDA 341

[Close]

BLAST of Lsi09G004240 vs. NCBI nr
Match: XP_004152402.1 (probable pectinesterase 68 [Cucumis sativus] >KGN50252.1 hypothetical protein Csa_000032 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 6.8e-181
Identity = 306/336 (91.07%), Postives = 315/336 (93.75%), Query Frame = 0


Query: 4   YFPSFFFFTFFLLCFSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAAVDAVPDYNT 63
           +  SFFF TFFLLCFSAAA   HHW+GP GHRLIKVNV GGSD FLSVQAAVD+VPDYNT
Sbjct: 5   FLHSFFFSTFFLLCFSAAA--NHHWIGPTGHRLIKVNVKGGSDVFLSVQAAVDSVPDYNT 64

Query: 64  VNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTAS 123
           VNT+IRISPGYY          PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTAS
Sbjct: 65  VNTIIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTAS 124

Query: 124 VTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAG 183
           VTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAG
Sbjct: 125 VTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAG 184

Query: 184 RHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAFVRCKV 243
           RHYFKECYIEGSIDFIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP EKTGFAF+RCKV
Sbjct: 185 RHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPIEKTGFAFLRCKV 244

Query: 244 TGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGAS 303
           TGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGAS
Sbjct: 245 TGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGAS 304

Query: 304 KVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           KVKGVSWA+ELE++EAHPFLA+SFVNGRHWIAPSDA
Sbjct: 305 KVKGVSWAKELEYKEAHPFLAKSFVNGRHWIAPSDA 338

[Close]

BLAST of Lsi09G004240 vs. NCBI nr
Match: XP_008437714.2 (PREDICTED: probable pectinesterase 68, partial [Cucumis melo])

HSP 1 Score: 637.1 bits (1642), Expect = 8.3e-179
Identity = 296/322 (91.93%), Postives = 306/322 (95.03%), Query Frame = 0


Query: 18  FSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYY-- 77
           FSAA  H HHWVGP GHRLIKVNVNGGSD FLSVQAAVD++PDYNTVNT+IRISPGYY  
Sbjct: 32  FSAATNHLHHWVGPTGHRLIKVNVNGGSDVFLSVQAAVDSIPDYNTVNTIIRISPGYYVE 91

Query: 78  --------PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNIS 137
                   PYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNIS
Sbjct: 92  KVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNIS 151

Query: 138 FKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSID 197
           FKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSID
Sbjct: 152 FKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSID 211

Query: 198 FIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQ 257
           FIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP+EKTGFAF+RCKVTGSGP+YVGRAMGQ
Sbjct: 212 FIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPHEKTGFAFLRCKVTGSGPIYVGRAMGQ 271

Query: 258 YSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFE 317
           YSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWA+ELE++
Sbjct: 272 YSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWAKELEYK 331

Query: 318 EAHPFLAQSFVNGRHWIAPSDA 330
           EAHPFLA+SFVNGRHWIAPSDA
Sbjct: 332 EAHPFLAKSFVNGRHWIAPSDA 353

[Close]

BLAST of Lsi09G004240 vs. NCBI nr
Match: KAG6579412.1 (putative pectinesterase 68, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 634.0 bits (1634), Expect = 7.1e-178
Identity = 306/345 (88.70%), Postives = 314/345 (91.01%), Query Frame = 0


Query: 1   MAFYFPSFFFF------TFFLLCFSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAA 60
           MAF   SFFFF       FFLL  +AA  HRHHWVGP GHRLIKV+VNG S EFLSVQAA
Sbjct: 1   MAFSLNSFFFFFFISVPAFFLL--AAAKHHRHHWVGPTGHRLIKVDVNGISGEFLSVQAA 60

Query: 61  VDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQ 120
           VDA+PDYNTVNT+IRISPGYY          PYITFEGGGKETTVIEWHDRAGDRGPSGQ
Sbjct: 61  VDAIPDYNTVNTLIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQ 120

Query: 121 QLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGA 180
           QLRTYRTASVTVFANYFSARNISFKNTAPAP+PGMQGWQAAAFRISGDKAYFSGCGFYGA
Sbjct: 121 QLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGA 180

Query: 181 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKT 240
           QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP EKT
Sbjct: 181 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPNEKT 240

Query: 241 GFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGV 300
           GFAFVRCKVTGSGP+YVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDH SNKNKTVFFGV
Sbjct: 241 GFAFVRCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHTSNKNKTVFFGV 300

Query: 301 YKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           YKCWGPGASKVKGVSWA+ELEFEEAHPFL +SFVNGRHWIAPSDA
Sbjct: 301 YKCWGPGASKVKGVSWAKELEFEEAHPFLVKSFVNGRHWIAPSDA 343

[Close]

BLAST of Lsi09G004240 vs. NCBI nr
Match: XP_022922190.1 (probable pectinesterase 68 [Cucurbita moschata])

HSP 1 Score: 632.9 bits (1631), Expect = 1.6e-177
Identity = 306/345 (88.70%), Postives = 313/345 (90.72%), Query Frame = 0


Query: 1   MAFYFPSFFFF------TFFLLCFSAAAKHRHHWVGPNGHRLIKVNVNGGSDEFLSVQAA 60
           M F   SFFFF       FFLL  +AA  HRHHWVGP GHRLIKV+VNG S EFLSVQAA
Sbjct: 1   MTFSLNSFFFFFFISVPAFFLL--AAAKHHRHHWVGPTGHRLIKVDVNGISGEFLSVQAA 60

Query: 61  VDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQ 120
           VDAVPDYNTVNT+IRISPGYY          PYITFEGGGKETTVIEWHDRAGDRGPSGQ
Sbjct: 61  VDAVPDYNTVNTLIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQ 120

Query: 121 QLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGA 180
           QLRTYRTASVTVFANYFSARNISFKNTAPAP+PGMQGWQAAAFRISGDKAYFSGCGFYGA
Sbjct: 121 QLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGA 180

Query: 181 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKT 240
           QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC LHSIATRFGSIAAQDRNSP EKT
Sbjct: 181 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPNEKT 240

Query: 241 GFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGV 300
           GFAFVRCKVTGSGP+YVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDH SNKNKTVFFGV
Sbjct: 241 GFAFVRCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHTSNKNKTVFFGV 300

Query: 301 YKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           YKCWGPGASKVKGVSWA+ELEFEEAHPFL +SFVNGRHWIAPSDA
Sbjct: 301 YKCWGPGASKVKGVSWAKELEFEEAHPFLVKSFVNGRHWIAPSDA 343

[Close]

BLAST of Lsi09G004240 vs. TAIR 10
Match: AT5G47500.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 511.5 bits (1316), Expect = 4.9e-145
Identity = 241/345 (69.86%), Postives = 277/345 (80.29%), Query Frame = 0


Query: 10  FFTFFLLCF-------------SAAAKHRHH--WVGPNGHRLIKVNVNGGSDEFLSVQAA 69
           F +F  LCF                 +H HH  WVGP+GH++I V++NG + +F SVQ A
Sbjct: 19  FVSFHCLCFRFSLVAACSNSTDDQQIQHHHHRKWVGPSGHKVITVSLNGHA-QFRSVQDA 78

Query: 70  VDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWHDRAGDRGPSGQ 129
           VD++P  N  +  I+I+PG+Y          PYITF+G G++ T IEWHDRA D G +GQ
Sbjct: 79  VDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQ 138

Query: 130 QLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGA 189
           QLRTY+TASVTV+ANYF+ARNISF NTAPAPLPGMQGWQA AFRISGDKA+FSGCGFYGA
Sbjct: 139 QLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGA 198

Query: 190 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKT 249
           QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC LHSIA+RFGSIAA  R  P EKT
Sbjct: 199 QDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRTCPEEKT 258

Query: 250 GFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGV 309
           GFAFV C+VTG+GP+YVGRAMGQYSRIVYAYTYFD +VAHGGWDDWDH SNK+KT FFGV
Sbjct: 259 GFAFVGCRVTGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGV 318

Query: 310 YKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWIAPSDA 330
           Y C+GPGA+  +GVSWAR L++E AHPF+A+SFVNGRHWIAP DA
Sbjct: 319 YNCYGPGAAATRGVSWARALDYESAHPFIAKSFVNGRHWIAPRDA 362

[Close]

BLAST of Lsi09G004240 vs. TAIR 10
Match: AT5G19730.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 296.6 bits (758), Expect = 2.5e-80
Identity = 142/298 (47.65%), Postives = 192/298 (64.43%), Query Frame = 0


Query: 37  IKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKE 96
           + V+      +F  +Q A+D++P  N V  VI++  G Y           +IT EG G E
Sbjct: 85  LTVHKKSNKGDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAE 144

Query: 97  TTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAA 156
            T +EW D A      G  + TY +AS  V + +F A+NI+F+NT P PLPG  G QA A
Sbjct: 145 KTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVA 204

Query: 157 FRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIA 216
            R+S D A F GC   GAQDTL D  GRHY+K+CYIEGS+DFIFGN  S+Y+ C +H+IA
Sbjct: 205 LRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIA 264

Query: 217 TRFGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGG 276
            + G++ AQ R+S  E TGF+FV+CKVTG+G +Y+GRA G +SR+V+AYTY D+++   G
Sbjct: 265 DKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRG 324

Query: 277 WDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWI 325
           W +W   S +  TVF+G YKC G GA+    V+WAREL  EEA PFL+ +F++G  WI
Sbjct: 325 WYNWGDPS-REMTVFYGQYKCTGAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWI 381

[Close]

BLAST of Lsi09G004240 vs. TAIR 10
Match: AT5G55590.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 278.5 bits (711), Expect = 7.0e-75
Identity = 147/327 (44.95%), Postives = 196/327 (59.94%), Query Frame = 0


Query: 19  SAAAKHRHHWVGPNGH---------RLIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIR 78
           S + K   +WV  N +         R+I V+ NGG D  ++VQ AVD VPD N+    I 
Sbjct: 55  SFSIKENSNWVTTNANANANATNVRRVIVVDKNGGGDS-VTVQGAVDMVPDSNSQRVKIF 114

Query: 79  ISPGYY----------PYITFEGGGKET--TVIEWHDRAGDRGPSGQQLRTYRTASVTVF 138
           I PG Y          PYI+F G       TVI W D+A D G  G++L TYRTASV++ 
Sbjct: 115 ILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIE 174

Query: 139 ANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYF 198
           +++F A  I+F+NT  A   G QG QA A RI GDKA F      G+QDTL DD G HYF
Sbjct: 175 SDFFCATAITFENTVVAE-AGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYF 234

Query: 199 KECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAQDRNSPYEKTGFAFVRCKVTGSG 258
            +CYI+G++DFIFGN +S+Y+DC +HS A R+G+IAA  R+S  E TGF+FV C ++G+G
Sbjct: 235 YQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYGAIAAHHRDSETEDTGFSFVNCDISGTG 294

Query: 259 PVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKG 318
            +Y+GRA G YSR VY+  +  D++   GW DW H   + K V FG Y C G GA +   
Sbjct: 295 QIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRK-VMFGEYNCRGRGAERGGR 354

Query: 319 VSWARELEFEEAHPFLAQSFVNGRHWI 325
           V W++ L  +E  PFL + F+ G  W+
Sbjct: 355 VPWSKTLTRDEVKPFLGREFIYGDQWL 378

[Close]

BLAST of Lsi09G004240 vs. TAIR 10
Match: AT2G36710.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 268.1 bits (684), Expect = 9.5e-72
Identity = 138/296 (46.62%), Postives = 184/296 (62.16%), Query Frame = 0


Query: 44  GSDEFLSVQAAVDAVPDYNTVNTVIRISPGYY----------PYITFEGGGKETTVIEWH 103
           G   F +VQ+A+D VPD ++  T+I ++ G Y            +  +G G + T IEW+
Sbjct: 97  GCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWN 156

Query: 104 DRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDK 163
           D A   G       T  + S  VFA  F+A NISFKN AP P PG    QA A RI GD+
Sbjct: 157 DTAKSAG------NTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQ 216

Query: 164 AYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATR----- 223
           A F GCGFYGAQDTL DD GRH+FKEC+I+GSIDFIFGNGRS+Y+DC ++SIA       
Sbjct: 217 AAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGV 276

Query: 224 FGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWD 283
            GSI AQ R S  E++GF+FV CK+ GSG + +GRA G Y+ +V++ TY   ++   GW+
Sbjct: 277 TGSITAQGRQSEDEQSGFSFVNCKIDGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWN 336

Query: 284 DWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHWI 325
           +W   S K KTV FG +KC+GPGA   + V + ++L   EA  F+  SF++G  W+
Sbjct: 337 NWGD-STKEKTVTFGEHKCYGPGADYKERVLFGKQLTDSEASSFIDVSFIDGDEWL 385

[Close]

BLAST of Lsi09G004240 vs. TAIR 10
Match: AT2G36700.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 251.5 bits (641), Expect = 9.2e-67
Identity = 134/301 (44.52%), Postives = 183/301 (60.80%), Query Frame = 0


Query: 36  LIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYY----------PYITFEGGGK 95
           ++KV++N G   F  VQ A+DA    +   T+I I  G Y            +  +G G 
Sbjct: 41  VLKVSLN-GCGRFKRVQDAIDASIGSSQSKTLILIDFGIYRERFIVHENKNNLVVQGMGY 100

Query: 96  ETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAA 155
             T IEW++             T+ + SV VF   F+A NISFKNTAPAP PG    QA 
Sbjct: 101 SRTSIEWNNTTASSN------GTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAV 160

Query: 156 AFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSI 215
           A ++ GDKA F GCGFYG QDTL D  GRH+FK C+IEGSIDFIFGNGRS+Y+DC LHSI
Sbjct: 161 ALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSI 220

Query: 216 A--TRFGSIAAQDRNSPYEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVA 275
           A     G I A  +++  ++TGF FV CK+TGS  V++GRA   Y+R++++ TY   VV+
Sbjct: 221 AKENTIGCITANGKDTLKDRTGFVFVNCKITGSARVWLGRAWRPYARVIFSKTYMSRVVS 280

Query: 276 HGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEFEEAHPFLAQSFVNGRHW 325
             GW+D      + +TV++G ++C+GPGA+  K V++A+ L   EA PF   SF++G  W
Sbjct: 281 LDGWNDMGDPKTQ-RTVYYGEHRCYGPGANHSKRVTYAKLLSDVEAAPFTNISFIDGEEW 333

The following BLAST results are available for this feature:

BLAST of Lsi09G004240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPF3	6.9e-144	69.86	Probable pectinesterase 68 OS=Arabidopsis thaliana OX=3702 GN=PME68 PE=2 SV=1	[more]
Q8VYZ3	3.5e-79	47.65	Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1	[more]
Q9FM79	9.9e-74	44.95	Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=2 SV=1	[more]
Q9ZQA3	1.3e-70	46.62	Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1	[more]
Q9ZQA4	1.3e-65	44.52	Putative pectinesterase 14 OS=Arabidopsis thaliana OX=3702 GN=PME14 PE=2 SV=1	[more]

BLAST of Lsi09G004240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9Y3	3.2e-184	91.50	Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00500...	[more]
A0A0A0KP96	3.3e-181	91.07	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G162010 PE=4 SV=1	[more]
A0A1S3AUB3	4.0e-179	91.93	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103483059 PE=4 SV=1	[more]
A0A6J1E808	7.6e-178	88.70	Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111430254 PE=4 SV=1	[more]
A0A6J1I193	2.4e-176	88.37	Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111468960 PE=4 SV=1	[more]

BLAST of Lsi09G004240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039718.1	6.6e-184	91.50	putative pectinesterase 68 [Cucumis melo var. makuwa]	[more]
XP_004152402.1	6.8e-181	91.07	probable pectinesterase 68 [Cucumis sativus] >KGN50252.1 hypothetical protein Cs...	[more]
XP_008437714.2	8.3e-179	91.93	PREDICTED: probable pectinesterase 68, partial [Cucumis melo]	[more]
KAG6579412.1	7.1e-178	88.70	putative pectinesterase 68, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022922190.1	1.6e-177	88.70	probable pectinesterase 68 [Cucurbita moschata]	[more]

BLAST of Lsi09G004240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47500.1	4.9e-145	69.86	Pectin lyase-like superfamily protein	[more]
AT5G19730.1	2.5e-80	47.65	Pectin lyase-like superfamily protein	[more]
AT5G55590.1	7.0e-75	44.95	Pectin lyase-like superfamily protein	[more]
AT2G36710.1	9.5e-72	46.62	Pectin lyase-like superfamily protein	[more]
AT2G36700.1	9.2e-67	44.52	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 35..328 e-value: 2.1E-85 score: 288.9
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 42..320 e-value: 8.0E-51 score: 172.5
None	No IPR available	PANTHER	PTHR31321	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	coord: 20..328
None	No IPR available	PANTHER	PTHR31321:SF19	PECTINESTERASE 68-RELATED	coord: 20..328
IPR033131	Pectinesterase, Asp active site	PROSITE	PS00503	PECTINESTERASE_2	coord: 182..191
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 38..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G004240.1	Lsi09G004240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity