Lsi09G003870 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G003870
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribosomal L22e protein family
Location	chr09: 4085462 .. 4088009 (+)
RNA-Seq Expression	Lsi09G003870
Synteny	Lsi09G003870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGATTCCCGCCAGGGCGAGCGAACGGATAATGCTGCAGAGTACAGAACCGAGGACCAAAATACCAGTGGCTGAGAATTCCGACCTTTTCATTTTTCACAGCGCCCATCAATGGCCGCTCTTAGCTTCGGCTTTACTGCCACCACCATCCACCTTCCATCAAGTTCTATTCTCACCCGCTCTCGCCCCAATCCCCAGACCATAACCTGCGTCGGATGGGTATCTTTCTAATGTTTCCCTTTTCTTCTTACACTTCCATTTTCTTTCTTCTTATCGGAAATTCGTTCGATTCAGGACCCAGAAGGTCTCTTCGGACGGCCTCAGACCGGCCACATCGCTCGAAATGAGTTCAAGAGGCGGCTGGAGAAGGACGCCGAAGCTCGCGAGGCTTTCGAGCGCCACGTCCGGGAAGAGAAGGAGCGCCGCAAAGCGCTTCGAGAGGTAATTCTAGCAATTTGGTTTTTGAATTCGATGGGTTTTTTTTCAATTGGGTTGTTTTCATTTCAAAATTTTAGTGTTGGCCTGGCTGTGAATGATTGAATGTGTTTTTCATCTCTTTTTATGGATAGTCTCGTGTGACTCCGGACAATGTGACTGGCCTTGTCGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGCTGAGACCCAGGTTAGTGATCGAAACAGGATTCTGATTTTTTTTTTCCGGTTCTGTGATCTCGAATCTGCTCAGAACTCGACAATTGTCTCGTTATTTGAATTTAGTTGCACCCTTAATTTTAGTTAATTAAATTTTTAATTAGTAGTTAGGATTTACTTGGGAAGGCTATATTATAGGAATGGTATTATGGTGAAAATAGAATATTAAGGGTATGTTAGTACTTAACCTCCATAGCACATCATCGGCTTAAGCTTTTTGGTTGAGTAGTGATTTAACATGGTATCAATGTGTTCGATCTCCTGCAATGTCATAATTATAATCCATCAATTTAAACTTTTGGATTTTGTAGATTTAACATGGTATCAAAGCAAGTCTCTTGTTTGAACCAATGCCATCAACTTAAGCTTTTGGATTTAGTAGATTTAACATGGTATCAAAGCAAGTCTTGGGTTTGAACCAATTTCATTAATTACCATAATCCAATGGCTTAAGTTTTTGGATATTTAACAGAATTGAATATTGTTTTTCAGTCCTGATGCAAAATTGATATAAACTTTGAATATGAATCAAGCCTTCTGATATTTTTATGGAATAGAAGTATTCCTTTCATTTTTCTTGTCTGTAACATGCATTAAATGGCAGGCTGAACGAGGAGTTTTTTTCACATGTTAAACTTGAGCTGGGTGAGCTTAGATTTGCTGTTACAAAAACTGAGGTTGATTCTTGGGACATGTTTTTCAATTTCCTTAGATAACAATTGATGCTATCACAGCAACTAAACAAGCACTTCCCATGATTGTTTTATAGGCCATGGAAGATAGAGTGATTGAGTTGGAAGCATTACAGAAAGCACTTGAAGAAGGAATAGGTTTGTCTAAAACCATATATTTTGTATCCTAGAATGCTTCCCCCTTATATATTTCATTTCATTTTCTGTATGTTACAGAAGCCTATGATAAAATGCAAGGGGAACTGGTAAAGGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACTGTATGTGTTTTGTTTCTCATTTCACTCTGCTGAGACTATCAGATTCTGCAACCAAAATGTTAATGCCATTGTTTTCCTTGTGCAGTTGCTAGACATGGTAGAGCGAAACGAGCTCAATAGATCGTTACTCGCCCTTCTCGACGAAAACATAGCCAATGCACAAATGGGTAACCAGGTAATGGCCTTTGAAGAATCTTTAAACTCCATTTTTTTAGTCTGTTTTCTGAGTTAGTATGTCAGCATCTACAACATCTTGTAGGGAATATGATCAATTTCTGCCAATATAGTTAGGGATGACTACATGAGGATTGAAACAGAATTGGTAAAAATTGGAAGGAAAAAAGTTGATAAGTTGAAGAAAATCAAAGCTTTTTATCTTCATTTTTCTTCTGATAGTTTTTTTGAATGAACTCTTTTACCAGAAACAAGCTGCTGCTTTCATGGAAAAGGTTCGAGGGGCAGTTCTCAAGTACATGACTGCGTAGTATTCTTGAGGAACAGATTTTGAATTCTTTCAGTTTTCTTCTCCTCAATCAAATTTAGGGTAACACGTTTATTAGAATCATATTGAAAATGGATGATGATGATGATGATGTAAGTTTTGTGTCTGAAATGTGAAATTTTTTTATGTTCTTAAGTAATCTTTGGTGTTGGTTGTGGTGGTGTATTTGAGGGGACTTTTATAAAGTTTATTTAAATAAGTTAAGAAGGGGAAATTTTTTATTTTTTATTCAAAATCTGTCTGAGTTGTATGCCCTCTAAACTTAGTAGGTGTTGTAATATTGATTTAAACTTAAAAAAGTGTTGCAACTTCTACCTTTCGATAAGTTTTCGTATATATATATATATGTGTATGTA

mRNA sequence

TACGATTCCCGCCAGGGCGAGCGAACGGATAATGCTGCAGAGTACAGAACCGAGGACCAAAATACCAGTGGCTGAGAATTCCGACCTTTTCATTTTTCACAGCGCCCATCAATGGCCGCTCTTAGCTTCGGCTTTACTGCCACCACCATCCACCTTCCATCAAGTTCTATTCTCACCCGCTCTCGCCCCAATCCCCAGACCATAACCTGCGTCGGATGGGACCCAGAAGGTCTCTTCGGACGGCCTCAGACCGGCCACATCGCTCGAAATGAGTTCAAGAGGCGGCTGGAGAAGGACGCCGAAGCTCGCGAGGCTTTCGAGCGCCACGTCCGGGAAGAGAAGGAGCGCCGCAAAGCGCTTCGAGAGTCTCGTGTGACTCCGGACAATGTGACTGGCCTTGTCGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGCTGAGACCCAGGCTGAACGAGGAGTTTTTTTCACATGTTAAACTTGAGCTGGGTGAGCTTAGATTTGCTGTTACAAAAACTGAGGCCATGGAAGATAGAGTGATTGAGTTGGAAGCATTACAGAAAGCACTTGAAGAAGGAATAGAAGCCTATGATAAAATGCAAGGGGAACTGGTAAAGGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACTTTGCTAGACATGGTAGAGCGAAACGAGCTCAATAGATCGTTACTCGCCCTTCTCGACGAAAACATAGCCAATGCACAAATGGGTAACCAGAAACAAGCTGCTGCTTTCATGGAAAAGGTTCGAGGGGCAGTTCTCAAGTACATGACTGCGTAGTATTCTTGAGGAACAGATTTTGAATTCTTTCAGTTTTCTTCTCCTCAATCAAATTTAGGGTAACACGTTTATTAGAATCATATTGAAAATGGATGATGATGATGATGATGTAAGTTTTGTGTCTGAAATGTGAAATTTTTTTATGTTCTTAAGTAATCTTTGGTGTTGGTTGTGGTGGTGTATTTGAGGGGACTTTTATAAAGTTTATTTAAATAAGTTAAGAAGGGGAAATTTTTTATTTTTTATTCAAAATCTGTCTGAGTTGTATGCCCTCTAAACTTAGTAGGTGTTGTAATATTGATTTAAACTTAAAAAAGTGTTGCAACTTCTACCTTTCGATAAGTTTTCGTATATATATATATATGTGTATGTA

Coding sequence (CDS)

ATGGCCGCTCTTAGCTTCGGCTTTACTGCCACCACCATCCACCTTCCATCAAGTTCTATTCTCACCCGCTCTCGCCCCAATCCCCAGACCATAACCTGCGTCGGATGGGACCCAGAAGGTCTCTTCGGACGGCCTCAGACCGGCCACATCGCTCGAAATGAGTTCAAGAGGCGGCTGGAGAAGGACGCCGAAGCTCGCGAGGCTTTCGAGCGCCACGTCCGGGAAGAGAAGGAGCGCCGCAAAGCGCTTCGAGAGTCTCGTGTGACTCCGGACAATGTGACTGGCCTTGTCGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGCTGAGACCCAGGCTGAACGAGGAGTTTTTTTCACATGTTAAACTTGAGCTGGGTGAGCTTAGATTTGCTGTTACAAAAACTGAGGCCATGGAAGATAGAGTGATTGAGTTGGAAGCATTACAGAAAGCACTTGAAGAAGGAATAGAAGCCTATGATAAAATGCAAGGGGAACTGGTAAAGGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACTTTGCTAGACATGGTAGAGCGAAACGAGCTCAATAGATCGTTACTCGCCCTTCTCGACGAAAACATAGCCAATGCACAAATGGGTAACCAGAAACAAGCTGCTGCTTTCATGGAAAAGGTTCGAGGGGCAGTTCTCAAGTACATGACTGCGTAG

Protein sequence

MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLEKDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLNEEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMTA

Homology

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BLAST of Lsi09G003870 vs. ExPASy TrEMBL
Match: A0A5A7TDT6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00080 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.8e-118
Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAALSFGFTATTIHLPS+SI  RSRP PQTITC+GWDPEGLFG+PQTGHIARNEFKRRLE
Sbjct: 1   MAALSFGFTATTIHLPSTSI--RSRPIPQTITCIGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           KDAEAREAFERHVREEKERRKALRESRVTPDNVTGL+EYFLDTEAQDIEFEIARLRPRLN
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFSHVKLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKY+T
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYIT 239

Query: 241 A 242
           A
Sbjct: 241 A 239

[Close]

BLAST of Lsi09G003870 vs. ExPASy TrEMBL
Match: A0A1S3AT96 (uncharacterized protein LOC103482648 OS=Cucumis melo OX=3656 GN=LOC103482648 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.9e-117
Identity = 230/241 (95.44%), Postives = 235/241 (97.51%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAALSFGFTATTIHLPS+SI  RSRP PQTITC+GWDPEGLFG+PQTGHIARNEFKRRLE
Sbjct: 1   MAALSFGFTATTIHLPSTSI--RSRPIPQTITCIGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           KDAEAREAFERHVREEKERRKALRESRV PDNVTGL+EYFLDTEAQDIEFEIARLRPRLN
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVIPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFSHVKLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKY+T
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYIT 239

Query: 241 A 242
           A
Sbjct: 241 A 239

[Close]

BLAST of Lsi09G003870 vs. ExPASy TrEMBL
Match: A0A0A0KKI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160130 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.4e-114
Identity = 226/241 (93.78%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAALSFGFT TTIHLPS+SI  RSR  PQTITCVGWDPEGLFG+PQTGHIARNEFKRRLE
Sbjct: 1   MAALSFGFTPTTIHLPSTSI--RSRRIPQTITCVGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           KDAEAREAFERHVREEKERRK LRESRV P NVTGL+EYFLDTEAQDIEFEIARLRPRLN
Sbjct: 61  KDAEAREAFERHVREEKERRKTLRESRVIPGNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFS VKLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSRVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDM+ERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT
Sbjct: 181 KILTSKDVKATLLDMLERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 239

Query: 241 A 242
           A
Sbjct: 241 A 239

[Close]

BLAST of Lsi09G003870 vs. ExPASy TrEMBL
Match: A0A6J1H2V9 (uncharacterized protein LOC111459862 OS=Cucurbita moschata OX=3662 GN=LOC111459862 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.9e-112
Identity = 218/241 (90.46%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAAL FGFTATTIH+ S+SILTR+RPNP+TITCVGWDPEG+FG PQTGHIAR EFKRRLE
Sbjct: 1   MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           +DAEAREAFER VREEKERR+ LR SRV P+NVTGL+EYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  RDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFS +KLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQ GNQK AAAFMEKVRGAVLKYMT
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMT 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of Lsi09G003870 vs. ExPASy TrEMBL
Match: A0A6J1KA41 (uncharacterized protein LOC111491485 OS=Cucurbita maxima OX=3661 GN=LOC111491485 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.8e-110
Identity = 216/241 (89.63%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAAL FGFTATTIH+ S+SILTR+RP P+TITCVGWDPEG+FG PQTGHIAR EFKRRLE
Sbjct: 1   MAALRFGFTATTIHVSSTSILTRTRPIPKTITCVGWDPEGIFGPPQTGHIARKEFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           +DAEAREAFE  VREEKERR+ LR SRV P+NVTGL+EYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  RDAEAREAFESQVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFS +KLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQ GNQK AAAFMEKVRGAVLKYMT
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMT 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of Lsi09G003870 vs. NCBI nr
Match: XP_038874696.1 (uncharacterized protein LOC120067243 [Benincasa hispida])

HSP 1 Score: 446.0 bits (1146), Expect = 2.0e-121
Identity = 235/241 (97.51%), Postives = 238/241 (98.76%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAALSFGFTATTIH PSSSILTRSRP+PQTITC+GWDPEGLFGRPQTGHIARNEFKRRLE
Sbjct: 1   MAALSFGFTATTIHPPSSSILTRSRPSPQTITCIGWDPEGLFGRPQTGHIARNEFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           KDAEAREAFERHVREEKERRKALRESRV PDNVTGL+EYFLDTEAQDIEFEIARLRPRLN
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVIPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFSHVKLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of Lsi09G003870 vs. NCBI nr
Match: KAA0039677.1 (uncharacterized protein E6C27_scaffold558G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 434.1 bits (1115), Expect = 7.8e-118
Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAALSFGFTATTIHLPS+SI  RSRP PQTITC+GWDPEGLFG+PQTGHIARNEFKRRLE
Sbjct: 1   MAALSFGFTATTIHLPSTSI--RSRPIPQTITCIGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           KDAEAREAFERHVREEKERRKALRESRVTPDNVTGL+EYFLDTEAQDIEFEIARLRPRLN
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFSHVKLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKY+T
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYIT 239

Query: 241 A 242
           A
Sbjct: 241 A 239

[Close]

BLAST of Lsi09G003870 vs. NCBI nr
Match: XP_008437135.1 (PREDICTED: uncharacterized protein LOC103482648 [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 3.9e-117
Identity = 230/241 (95.44%), Postives = 235/241 (97.51%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAALSFGFTATTIHLPS+SI  RSRP PQTITC+GWDPEGLFG+PQTGHIARNEFKRRLE
Sbjct: 1   MAALSFGFTATTIHLPSTSI--RSRPIPQTITCIGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           KDAEAREAFERHVREEKERRKALRESRV PDNVTGL+EYFLDTEAQDIEFEIARLRPRLN
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVIPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFSHVKLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKY+T
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYIT 239

Query: 241 A 242
           A
Sbjct: 241 A 239

[Close]

BLAST of Lsi09G003870 vs. NCBI nr
Match: XP_004147583.2 (uncharacterized protein LOC101214026 [Cucumis sativus] >KGN50210.1 hypothetical protein Csa_000382 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113
Identity = 226/241 (93.78%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAALSFGFT TTIHLPS+SI  RSR  PQTITCVGWDPEGLFG+PQTGHIARNEFKRRLE
Sbjct: 1   MAALSFGFTPTTIHLPSTSI--RSRRIPQTITCVGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           KDAEAREAFERHVREEKERRK LRESRV P NVTGL+EYFLDTEAQDIEFEIARLRPRLN
Sbjct: 61  KDAEAREAFERHVREEKERRKTLRESRVIPGNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFS VKLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSRVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDM+ERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT
Sbjct: 181 KILTSKDVKATLLDMLERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 239

Query: 241 A 242
           A
Sbjct: 241 A 239

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BLAST of Lsi09G003870 vs. NCBI nr
Match: XP_022958721.1 (uncharacterized protein LOC111459862 [Cucurbita moschata] >KAG6606162.1 hypothetical protein SDJN03_03479, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036106.1 hypothetical protein SDJN02_02906, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111
Identity = 218/241 (90.46%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MAALSFGFTATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRRLE 60
           MAAL FGFTATTIH+ S+SILTR+RPNP+TITCVGWDPEG+FG PQTGHIAR EFKRRLE
Sbjct: 1   MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLE 60

Query: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPRLN 120
           +DAEAREAFER VREEKERR+ LR SRV P+NVTGL+EYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  RDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 120

Query: 121 EEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180
           EEFFS +KLELGELRFAV KTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKYMT 240
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQ GNQK AAAFMEKVRGAVLKYMT
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMT 240

Query: 241 A 242
           A
Sbjct: 241 A 241

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BLAST of Lsi09G003870 vs. TAIR 10
Match: AT1G62780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 295.4 bits (755), Expect = 4.1e-80
Identity = 159/242 (65.70%), Postives = 193/242 (79.75%), Query Frame = 0


Query: 1   MAALSFGF--TATTIHLPSSSILTRSRPNPQTITCVGWDPEGLFGRPQTGHIARNEFKRR 60
           MA LSFG    ATT+       + R       ITC  WDP+G+ G  QTGHIAR EFKRR
Sbjct: 1   MATLSFGIAAAATTVR-----TIPRFNSRRSKITC-EWDPKGVLGPAQTGHIARLEFKRR 60

Query: 61  LEKDAEAREAFERHVREEKERRKALRESRVTPDNVTGLVEYFLDTEAQDIEFEIARLRPR 120
           LE+D+EAREAF++ +REEKERR+ALR+SRV PD    L+EYFLDTEAQ+IE+EIARLR R
Sbjct: 61  LERDSEAREAFQKQLREEKERRQALRQSRVVPDTAAELIEYFLDTEAQEIEYEIARLRGR 120

Query: 121 LNEEFFSHVKLELGELRFAVTKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREG 180
           LN+EFF+ ++LE+G++RFAVTKT  +EDR+IELE LQKALEEGIEAYDKMQ EL+ A   
Sbjct: 121 LNDEFFAQIRLEIGQIRFAVTKTADIEDRLIELETLQKALEEGIEAYDKMQNELMTATNS 180

Query: 181 LTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQKQAAAFMEKVRGAVLKY 240
           LTK+LTS D+K TLLDMVE+N++NRSLLALLDENIANA  GNQK+A  +MEK+R +VLKY
Sbjct: 181 LTKLLTSTDIKTTLLDMVEKNQINRSLLALLDENIANAYKGNQKEAGDYMEKIRSSVLKY 236

The following BLAST results are available for this feature:

BLAST of Lsi09G003870 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi09G003870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDT6	3.8e-118	95.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3AT96	1.9e-117	95.44	uncharacterized protein LOC103482648 OS=Cucumis melo OX=3656 GN=LOC103482648 PE=...	[more]
A0A0A0KKI9	7.4e-114	93.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160130 PE=4 SV=1	[more]
A0A6J1H2V9	6.9e-112	90.46	uncharacterized protein LOC111459862 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A6J1KA41	3.8e-110	89.63	uncharacterized protein LOC111491485 OS=Cucurbita maxima OX=3661 GN=LOC111491485...	[more]

BLAST of Lsi09G003870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874696.1	2.0e-121	97.51	uncharacterized protein LOC120067243 [Benincasa hispida]	[more]
KAA0039677.1	7.8e-118	95.85	uncharacterized protein E6C27_scaffold558G00080 [Cucumis melo var. makuwa]	[more]
XP_008437135.1	3.9e-117	95.44	PREDICTED: uncharacterized protein LOC103482648 [Cucumis melo]	[more]
XP_004147583.2	1.5e-113	93.78	uncharacterized protein LOC101214026 [Cucumis sativus] >KGN50210.1 hypothetical ...	[more]
XP_022958721.1	1.4e-111	90.46	uncharacterized protein LOC111459862 [Cucurbita moschata] >KAG6606162.1 hypothet...	[more]

BLAST of Lsi09G003870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62780.1	4.1e-80	65.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..171
None	No IPR available	COILS	Coil	Coil	coord: 66..86
None	No IPR available	PANTHER	PTHR36333	DIMETHYLALLYL, ADENOSINE TRNA METHYLTHIOTRANSFERASE	coord: 1..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G003870.1	Lsi09G003870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding