Lsi09G003360 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G003360
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBHLH transcription factor
Locationchr09: 3490469 .. 3492254 (-)
RNA-Seq ExpressionLsi09G003360
SyntenyLsi09G003360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAGTTTTGTTCCTCAATTGCCCTTCGAGATTCATAGTAACACTGTCTCTCAAAACCTCAAAAATGGCCGCCGGAAAAAGCCACCGCCGAATACGTTCGATGATAAAGGTGATGGGAGCTCCAATGAACACAAAAAGAAGAAGATTATTCACAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCCACTCTTTACTCCACTCTTCGCTCACTTCTTCCTATCGAATATCTCAAGGTAAGATAACATCATTTAAAAAGTGACAAATAATTAGATGTTGAAAGTTTAGATGCTTATCAGATCTACGCATATTATACACTACTTTTTTTTCTCTATTAAATTTGCTTTCATCCATCGATTTATGATCAATTGGTGATTTAAGATGGTATCAAATATCAACACAAATTTTGAGTTGGCCTAGTAGTAGTGGAAACATAAAAAAAAACCCAAAGGGCTAAGGAGTCGTGGATTCAATCCACGGTGACCACCTATCTAAGATTTAATATCCCGCAAGTTTCCTCAGGTTGTCCTATGAGATTAGTTGAGGTGTGGGTAAGCTGGCCTAAACACTCACGGATATGAAAAAAAAATTAATTTAAAATCCAATTTTGTAAATTAACTAATTTTCTTTTATGTGTATACTCTTTAACACTCTTTTTCGTTTGTGAGTTAAAAAATTACACCACACTTAATAAAATATTTTTATATAAAAGGAAAAATATTTAAAAACTTGACGGATAAGTTTTTGTTAAATAGAGAAAATGAAAGGAAGGAAGAGGAGAGAAGATATTTTTTAAGGTTAAAATATATTTGGGTCTCTATATTGATTAGTCACTATACTTTTAAATGTCTAAGTTTAGTTCTTGTACTTTTAATAAATTTTAAATTTAATCTTCAAAAGTTAATTTTTCTCAAAATTAGATAAATAATAATAAAAAAAATGCAAGAAAACACATTACTTGAATGTGTTTCCAAAATCTATAGTGAAAATGCTCATGGATTATAAAAGGTTTTTAGAAAAAATCAATAATGAACTAATATAGAGTCAAGATTTATCGAAAATATGTGAACTAAAATTGAACAAGTATAAAGACCAAAATGGTATTTTAGTTTTTTTTTATTTTTTACAAAATAAATAGCTGTCAAACTCTTAGTGAGGTCGTACGAGAAATTTCTAATATTATTATTATTCCATCAATTATTGACATAAATATAACCACATAACCACCTTTTTTTATTGAGAAAAGACCTTACACATTTCGTTTATAAGATACTTGGATTACTCTTTTCATTTGATTTATTTCTCATCCCATGAATTGACATTTATAGTAGCATATGGTGATTCATATAGGGAAAACGGTCGATATGTGATCACATGCAAGAGACAGTTAAGTACATTCGATATATGCAAAGCAAGATCCAAGAACTATGTGATAAAAGAGAGGAGTTAAAAAAACAATCAAATAACCAAAATCCAGACATGGTAGAAACAGAAACATTAAATTCCTCAAAAAGAGACAAAGTTTTAGTAAGAGCAAGAAATGGATCAGGAGGAGTTCAAGTTATTTTAGACACTGCCACCCAACAAAGGCTCCCTCTTTCCAACATTCTTGAAGCTTTAATTGACGAAGGTTTTGAAATCCTTAGCTGCAATTCCAACAAAATAAACGACAGGTTCCTTCACACCATCGAATCTCAACCTGTCTTTACTTCTGCTCAATGTCCAATCATCGACATCTCCGACCTTCAATATAAGTTGACAAATTTAGAGTATTTTCCTTTGGAT

mRNA sequence

AATAGTTTTGTTCCTCAATTGCCCTTCGAGATTCATAGTAACACTGTCTCTCAAAACCTCAAAAATGGCCGCCGGAAAAAGCCACCGCCGAATACGTTCGATGATAAAGGTGATGGGAGCTCCAATGAACACAAAAAGAAGAAGATTATTCACAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCCACTCTTTACTCCACTCTTCGCTCACTTCTTCCTATCGAATATCTCAAGGGAAAACGGTCGATATGTGATCACATGCAAGAGACAGTTAAGTACATTCGATATATGCAAAGCAAGATCCAAGAACTATGTGATAAAAGAGAGGAGTTAAAAAAACAATCAAATAACCAAAATCCAGACATGGTAGAAACAGAAACATTAAATTCCTCAAAAAGAGACAAAGTTTTAGTAAGAGCAAGAAATGGATCAGGAGGAGTTCAAGTTATTTTAGACACTGCCACCCAACAAAGGCTCCCTCTTTCCAACATTCTTGAAGCTTTAATTGACGAAGGTTTTGAAATCCTTAGCTGCAATTCCAACAAAATAAACGACAGGTTCCTTCACACCATCGAATCTCAACCTGTCTTTACTTCTGCTCAATGTCCAATCATCGACATCTCCGACCTTCAATATAAGTTGACAAATTTAGAGTATTTTCCTTTGGAT

Coding sequence (CDS)

AATAGTTTTGTTCCTCAATTGCCCTTCGAGATTCATAGTAACACTGTCTCTCAAAACCTCAAAAATGGCCGCCGGAAAAAGCCACCGCCGAATACGTTCGATGATAAAGGTGATGGGAGCTCCAATGAACACAAAAAGAAGAAGATTATTCACAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCCACTCTTTACTCCACTCTTCGCTCACTTCTTCCTATCGAATATCTCAAGGGAAAACGGTCGATATGTGATCACATGCAAGAGACAGTTAAGTACATTCGATATATGCAAAGCAAGATCCAAGAACTATGTGATAAAAGAGAGGAGTTAAAAAAACAATCAAATAACCAAAATCCAGACATGGTAGAAACAGAAACATTAAATTCCTCAAAAAGAGACAAAGTTTTAGTAAGAGCAAGAAATGGATCAGGAGGAGTTCAAGTTATTTTAGACACTGCCACCCAACAAAGGCTCCCTCTTTCCAACATTCTTGAAGCTTTAATTGACGAAGGTTTTGAAATCCTTAGCTGCAATTCCAACAAAATAAACGACAGGTTCCTTCACACCATCGAATCTCAACCTGTCTTTACTTCTGCTCAATGTCCAATCATCGACATCTCCGACCTTCAATATAAGTTGACAAATTTAGAGTATTTTCCTTTGGAT

Protein sequence

NSFVPQLPFEIHSNTVSQNLKNGRRKKPPPNTFDDKGDGSSNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKKQSNNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEGFEILSCNSNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLEYFPLD
Homology
BLAST of Lsi09G003360 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 76/209 (36.36%), Postives = 130/209 (62.20%), Query Frame = 0

Query: 19  NLKNGRRKKPPPNTFDDKGDGSS-------NEHKKKKIIHRDVERQRRQEMSTLYSTLRS 78
           N K  +R++P  +  +  G G S       +  KKKK++HRD+ERQRRQEM+TL++TLR+
Sbjct: 8   NPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRT 67

Query: 79  LLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKK---QSNNQNPDMVETET 138
            LP++Y+KGKR++ DH+   V +I+  +++I+EL  +R+EL +   Q    NPD  +T +
Sbjct: 68  HLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGS 127

Query: 139 LNSSKRDKVLVRARNGSGGVQVIL--DTATQQRLPLSNILEALIDEGFEILSCNSNKIND 198
            +  K +   V  +    G++V++  +++  + LPLS +LE + ++G E++S  + ++ND
Sbjct: 128 -DVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVND 187

Query: 199 RFLHTIESQPVFTSAQCPIIDISDLQYKL 216
           R +HTI+ +    S  C  ID+  LQ KL
Sbjct: 188 RLMHTIQVE--VNSFGC--IDLLWLQQKL 211

BLAST of Lsi09G003360 vs. ExPASy Swiss-Prot
Match: Q9FLI0 (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-21
Identity = 66/201 (32.84%), Postives = 116/201 (57.71%), Query Frame = 0

Query: 17  SQNLKNGRRKKPPPNTFDDKGDGSSNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPIE 76
           S N K  R +   P   D+         K+KK++HR++ERQRRQEM+ L+++LRS LP++
Sbjct: 4   SNNPKKTRHQSHMPQERDE-------TKKEKKLLHRNIERQRRQEMAILFASLRSQLPLK 63

Query: 77  YLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKKQSNNQNPDMVETETLNSSKRDK 136
           Y+KGKR++ DH+   V +I+  Q++I++L  +R+ELK++  +            SS+ + 
Sbjct: 64  YIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEP 123

Query: 137 VLVRARNGSGGVQVILDTATQ--QRLPLSNILEALIDEGFEILSCNSNKINDRFLHTIES 196
             V  +    G +V++ +     +  PLS +LE L  +G E++S  + ++N+R ++TI+ 
Sbjct: 124 ASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQV 183

Query: 197 QPVFTSAQCPIIDISDLQYKL 216
           +    S  C   D++ LQ KL
Sbjct: 184 E--VNSFDC--FDLAWLQQKL 193

BLAST of Lsi09G003360 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-20
Identity = 63/179 (35.20%), Postives = 111/179 (62.01%), Query Frame = 0

Query: 47  KKIIHRDVERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELC 106
           +K++HR+ ERQRRQEM++LY++LRSLLP+ ++KGKRS  D + E V YI+Y+Q KI+EL 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 107 DKREELKKQS-----NNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLP 166
            +R++L   S      + N D  E   + S K   V+   R    GV+++L +      P
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVV---RQCLVGVEIMLSSRCCGGQP 121

Query: 167 -LSNILEALIDEGFEILSCNSNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLE 220
             S++L+ L + G  +L+  S+ ++DR ++TI+++    +    +ID+++L+ +L  ++
Sbjct: 122 RFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAE---VNDMALMIDLAELEKRLIRMK 174

BLAST of Lsi09G003360 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.2e-19
Identity = 56/170 (32.94%), Postives = 101/170 (59.41%), Query Frame = 0

Query: 47  KKIIHRDVERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELC 106
           +K++H+++E++RRQEM++LY++LRSLLP+E+++GKRS  D ++  V YI Y+Q  I+++ 
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 107 DKREELKKQSNNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNIL 166
            KR++L   S        E E    S      V  R    G++++L      + P S++L
Sbjct: 62  SKRDDLVLLSGRSFRSSNEQEWNEISNH----VVIRPCLVGIEIVLSIL---QTPFSSVL 121

Query: 167 EALIDEGFEILSCNSNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLT 217
           + L + G  +L    + +NDR +HT++++         +ID++DL+  LT
Sbjct: 122 QVLREHGLYVLGYICSSVNDRLIHTLQAE----VNDLALIDLADLKDTLT 160

BLAST of Lsi09G003360 vs. ExPASy Swiss-Prot
Match: Q9LQ08 (Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 69/194 (35.57%), Postives = 112/194 (57.73%), Query Frame = 0

Query: 35  DKGDGSSNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKY 94
           ++ + + ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKRS  DH+ + V Y
Sbjct: 62  NEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNY 121

Query: 95  IRYMQSKIQELCDKREELKK--QSNNQNPDMVE--TETLNSSKR-----------DK-VL 154
           I+ +Q KI+EL +KR  +KK   +       +E  T +L+SS             DK + 
Sbjct: 122 IKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHIT 181

Query: 155 VRARNGSGGVQVILDTAT-QQRLPLSNILEALIDE-GFEILSCNSNKINDRFLHTIESQP 211
           V       GV++I+     + +  LS++L+ L  E  F ++SC S +   RF+HTI SQ 
Sbjct: 182 VVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQ- 241

BLAST of Lsi09G003360 vs. ExPASy TrEMBL
Match: A0A5A7TLF7 (Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003210 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.8e-93
Identity = 185/231 (80.09%), Postives = 200/231 (86.58%), Query Frame = 0

Query: 1   NSFVPQLPFEIHSN-----TVSQNLKNGRRKKPPPNTFDDKGD-GSSNEHKKKKIIHRDV 60
           N FVPQ P  + +N     TVS   KNGRRKKPP NT DDK D  +SNEHKKKKI+HRDV
Sbjct: 29  NCFVPQFPSILENNNNNSITVSPRPKNGRRKKPPANTSDDKDDENNSNEHKKKKIMHRDV 88

Query: 61  ERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKK 120
           ERQRRQEMS+LYSTLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQELCDKR+ELKK
Sbjct: 89  ERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKK 148

Query: 121 -QSNNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEG 180
            QSNNQNPDMVETETL S+KRDKV+VRAR+GSGG+QVILDTAT+ RLPLSNIL AL D+G
Sbjct: 149 LQSNNQNPDMVETETLKSTKRDKVVVRARDGSGGIQVILDTATRHRLPLSNILVALTDQG 208

Query: 181 FEILSCNSNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLEYFPLD 225
            EILSC+SNK+NDRFLHTIESQPVFTS   PIID+S LQY LTNLEY PLD
Sbjct: 209 LEILSCSSNKLNDRFLHTIESQPVFTSTNSPIIDVSGLQYTLTNLEYCPLD 259

BLAST of Lsi09G003360 vs. ExPASy TrEMBL
Match: A0A1S3ATY1 (transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103482687 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.8e-93
Identity = 185/231 (80.09%), Postives = 200/231 (86.58%), Query Frame = 0

Query: 1   NSFVPQLPFEIHSN-----TVSQNLKNGRRKKPPPNTFDDKGD-GSSNEHKKKKIIHRDV 60
           N FVPQ P  + +N     TVS   KNGRRKKPP NT DDK D  +SNEHKKKKI+HRDV
Sbjct: 29  NCFVPQFPSILENNNNNSITVSPRPKNGRRKKPPANTSDDKDDENNSNEHKKKKIMHRDV 88

Query: 61  ERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKK 120
           ERQRRQEMS+LYSTLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQELCDKR+ELKK
Sbjct: 89  ERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKK 148

Query: 121 -QSNNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEG 180
            QSNNQNPDMVETETL S+KRDKV+VRAR+GSGG+QVILDTAT+ RLPLSNIL AL D+G
Sbjct: 149 LQSNNQNPDMVETETLKSTKRDKVVVRARDGSGGIQVILDTATRHRLPLSNILVALTDQG 208

Query: 181 FEILSCNSNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLEYFPLD 225
            EILSC+SNK+NDRFLHTIESQPVFTS   PIID+S LQY LTNLEY PLD
Sbjct: 209 LEILSCSSNKLNDRFLHTIESQPVFTSTNSPIIDVSGLQYTLTNLEYCPLD 259

BLAST of Lsi09G003360 vs. ExPASy TrEMBL
Match: A0A0A0KKN9 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 3.1e-90
Identity = 185/231 (80.09%), Postives = 199/231 (86.15%), Query Frame = 0

Query: 1   NSFVPQLPFEIHSN---TVSQNLKNGRRKKP-PPNTFDDKGD-GSSNEHKKKKIIHRDVE 60
           N FVPQ P  + +N   TVS  LKN RRKKP P NT DDK D  +SNEHKKKKI+HRDVE
Sbjct: 30  NCFVPQFPSILENNNNSTVSPTLKNSRRKKPVPANTSDDKDDENNSNEHKKKKIMHRDVE 89

Query: 61  RQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKK- 120
           RQRRQEMS+LYSTLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQELCDKR+ELKK 
Sbjct: 90  RQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKKL 149

Query: 121 QSNNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEGF 180
           QSNNQNP MVETETL S+KRDKV+VRAR+GSGG+QVILDT TQ RL LSNILEALID+GF
Sbjct: 150 QSNNQNPGMVETETLQSTKRDKVVVRARDGSGGIQVILDTPTQHRLTLSNILEALIDQGF 209

Query: 181 EILSCNSNKINDRFLHTIESQP-VFTSAQCPIIDISDLQYKLTNLEYFPLD 225
           EILSC+SNK+NDRFLHTIESQP VFT    P+IDISDLQY L NLEY PLD
Sbjct: 210 EILSCSSNKLNDRFLHTIESQPAVFTDTNSPLIDISDLQYMLANLEYCPLD 260

BLAST of Lsi09G003360 vs. ExPASy TrEMBL
Match: A0A6J1H558 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111459679 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67
Identity = 145/224 (64.73%), Postives = 174/224 (77.68%), Query Frame = 0

Query: 4   VPQLPFEI---HSNTVSQNLKNGRRKKPPPNTFDDKGDGSSNEHKKKKIIHRDVERQRRQ 63
           VPQ P      ++ + +Q  KNGRRKKPP N+ DD GD + NEHKKKKI+HRDVERQRRQ
Sbjct: 30  VPQFPSISPLDNNKSGTQKPKNGRRKKPPANSSDDIGDMNPNEHKKKKIMHRDVERQRRQ 89

Query: 64  EMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKKQSNNQN 123
           +M++LY+TLRSLLP EYLKGKRSICDHM E VKYIR+MQS+IQ LC+KR+ELK+ S ++N
Sbjct: 90  DMASLYATLRSLLPHEYLKGKRSICDHMLEAVKYIRHMQSRIQVLCNKRDELKRVS-DKN 149

Query: 124 PDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEGFEILSCN 183
           P     ETL+SSKRD VLVRARN SGGVQV+L+TATQ  LP+SNIL  L  EG EILS  
Sbjct: 150 PVATMVETLDSSKRDSVLVRARNESGGVQVVLNTATQHNLPVSNILRDLATEGLEILSYI 209

Query: 184 SNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLEYFPLD 225
           S K+ND F+HTIE Q +  S   P ID+S+LQ+KL NLEYF L+
Sbjct: 210 STKVNDSFIHTIECQTLVDSNHTPSIDVSELQHKLMNLEYFLLN 252

BLAST of Lsi09G003360 vs. ExPASy TrEMBL
Match: A0A6J1K9B6 (transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111491282 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.6e-65
Identity = 144/224 (64.29%), Postives = 173/224 (77.23%), Query Frame = 0

Query: 4   VPQLP--FEIHSN-TVSQNLKNGRRKKPPPNTFDDKGDGSSNEHKKKKIIHRDVERQRRQ 63
           VPQ P    + SN + SQ  KNGRRK PP N+ DD GD + NEHKKKKI+HRDVERQRRQ
Sbjct: 30  VPQFPSISPLDSNKSGSQKPKNGRRKNPPANSSDDIGDMNPNEHKKKKIMHRDVERQRRQ 89

Query: 64  EMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKKQSNNQN 123
           +M++LY+TLRSLLP EYLKGKRSICDHM E VKYIR+MQS+IQ+L +KR+ELK+ S ++N
Sbjct: 90  DMASLYATLRSLLPHEYLKGKRSICDHMLEAVKYIRHMQSRIQDLSNKRDELKRVS-DKN 149

Query: 124 PDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEGFEILSCN 183
           P     ETL+SSKR+ VLVRARN SG VQV+L+TATQ  LP+SNIL  L  EG EILS  
Sbjct: 150 PVATMVETLDSSKRESVLVRARNESGEVQVVLNTATQHNLPVSNILRDLATEGLEILSYI 209

Query: 184 SNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLEYFPLD 225
           S K+ND F+HTIE Q +  S   P ID+S+LQ+KL NLEYF L+
Sbjct: 210 STKVNDSFIHTIECQTLVDSNHTPSIDVSELQHKLINLEYFLLN 252

BLAST of Lsi09G003360 vs. NCBI nr
Match: XP_008437182.1 (PREDICTED: transcription factor bHLH36-like [Cucumis melo] >KAA0042816.1 transcription factor bHLH36-like [Cucumis melo var. makuwa])

HSP 1 Score: 349.7 bits (896), Expect = 1.8e-92
Identity = 185/231 (80.09%), Postives = 200/231 (86.58%), Query Frame = 0

Query: 1   NSFVPQLPFEIHSN-----TVSQNLKNGRRKKPPPNTFDDKGD-GSSNEHKKKKIIHRDV 60
           N FVPQ P  + +N     TVS   KNGRRKKPP NT DDK D  +SNEHKKKKI+HRDV
Sbjct: 29  NCFVPQFPSILENNNNNSITVSPRPKNGRRKKPPANTSDDKDDENNSNEHKKKKIMHRDV 88

Query: 61  ERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKK 120
           ERQRRQEMS+LYSTLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQELCDKR+ELKK
Sbjct: 89  ERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKK 148

Query: 121 -QSNNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEG 180
            QSNNQNPDMVETETL S+KRDKV+VRAR+GSGG+QVILDTAT+ RLPLSNIL AL D+G
Sbjct: 149 LQSNNQNPDMVETETLKSTKRDKVVVRARDGSGGIQVILDTATRHRLPLSNILVALTDQG 208

Query: 181 FEILSCNSNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLEYFPLD 225
            EILSC+SNK+NDRFLHTIESQPVFTS   PIID+S LQY LTNLEY PLD
Sbjct: 209 LEILSCSSNKLNDRFLHTIESQPVFTSTNSPIIDVSGLQYTLTNLEYCPLD 259

BLAST of Lsi09G003360 vs. NCBI nr
Match: XP_004147594.1 (transcription factor bHLH36 [Cucumis sativus] >KGN50163.1 hypothetical protein Csa_000444 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 6.4e-90
Identity = 185/231 (80.09%), Postives = 199/231 (86.15%), Query Frame = 0

Query: 1   NSFVPQLPFEIHSN---TVSQNLKNGRRKKP-PPNTFDDKGD-GSSNEHKKKKIIHRDVE 60
           N FVPQ P  + +N   TVS  LKN RRKKP P NT DDK D  +SNEHKKKKI+HRDVE
Sbjct: 30  NCFVPQFPSILENNNNSTVSPTLKNSRRKKPVPANTSDDKDDENNSNEHKKKKIMHRDVE 89

Query: 61  RQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKK- 120
           RQRRQEMS+LYSTLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQELCDKR+ELKK 
Sbjct: 90  RQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKKL 149

Query: 121 QSNNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEGF 180
           QSNNQNP MVETETL S+KRDKV+VRAR+GSGG+QVILDT TQ RL LSNILEALID+GF
Sbjct: 150 QSNNQNPGMVETETLQSTKRDKVVVRARDGSGGIQVILDTPTQHRLTLSNILEALIDQGF 209

Query: 181 EILSCNSNKINDRFLHTIESQP-VFTSAQCPIIDISDLQYKLTNLEYFPLD 225
           EILSC+SNK+NDRFLHTIESQP VFT    P+IDISDLQY L NLEY PLD
Sbjct: 210 EILSCSSNKLNDRFLHTIESQPAVFTDTNSPLIDISDLQYMLANLEYCPLD 260

BLAST of Lsi09G003360 vs. NCBI nr
Match: XP_022958459.1 (transcription factor bHLH118-like [Cucurbita moschata] >KAG6606137.1 Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.2 bits (679), Expect = 2.6e-67
Identity = 145/224 (64.73%), Postives = 174/224 (77.68%), Query Frame = 0

Query: 4   VPQLPFEI---HSNTVSQNLKNGRRKKPPPNTFDDKGDGSSNEHKKKKIIHRDVERQRRQ 63
           VPQ P      ++ + +Q  KNGRRKKPP N+ DD GD + NEHKKKKI+HRDVERQRRQ
Sbjct: 30  VPQFPSISPLDNNKSGTQKPKNGRRKKPPANSSDDIGDMNPNEHKKKKIMHRDVERQRRQ 89

Query: 64  EMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKKQSNNQN 123
           +M++LY+TLRSLLP EYLKGKRSICDHM E VKYIR+MQS+IQ LC+KR+ELK+ S ++N
Sbjct: 90  DMASLYATLRSLLPHEYLKGKRSICDHMLEAVKYIRHMQSRIQVLCNKRDELKRVS-DKN 149

Query: 124 PDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEGFEILSCN 183
           P     ETL+SSKRD VLVRARN SGGVQV+L+TATQ  LP+SNIL  L  EG EILS  
Sbjct: 150 PVATMVETLDSSKRDSVLVRARNESGGVQVVLNTATQHNLPVSNILRDLATEGLEILSYI 209

Query: 184 SNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLEYFPLD 225
           S K+ND F+HTIE Q +  S   P ID+S+LQ+KL NLEYF L+
Sbjct: 210 STKVNDSFIHTIECQTLVDSNHTPSIDVSELQHKLMNLEYFLLN 252

BLAST of Lsi09G003360 vs. NCBI nr
Match: XP_038875626.1 (transcription factor bHLH118-like [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 1.3e-66
Identity = 137/219 (62.56%), Postives = 172/219 (78.54%), Query Frame = 0

Query: 7   LPFEIHSNTVSQNLKNGRRKKPPPNTFDDKGDGSSNEHKKKKIIHRDVERQRRQEMSTLY 66
           +P +   N VSQN KNGRRKKP PNT +D G+ S NE +KKKIIHRDVERQRRQEMS+LY
Sbjct: 31  MPVDNRRNGVSQNQKNGRRKKPLPNTCNDNGNESPNEERKKKIIHRDVERQRRQEMSSLY 90

Query: 67  STLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKKQSNNQNPDMVET 126
           +TLRSLLP+EYLKGKRSI DH+ ETV YI++MQ +IQ+L DKR+EL+K SN     +   
Sbjct: 91  TTLRSLLPLEYLKGKRSISDHIHETVNYIQHMQERIQQLSDKRDELRKLSNGTTATVDTA 150

Query: 127 ETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEGFEILSCNSNKIND 186
           +TLNSS+RD V+VR ++G  G+QV++DTAT+ R PLSN L+AL  EG EILSC SN++N+
Sbjct: 151 KTLNSSERDSVVVRPKDGI-GIQVVIDTATKHRFPLSNFLQALAAEGLEILSCISNRLNE 210

Query: 187 RFLHTIESQPVFTS-AQCPIIDISDLQYKLTNLEYFPLD 225
           RF+HTIE QP+  +    P ID+ +L +KLTNLEYFPLD
Sbjct: 211 RFIHTIECQPILNNDGVYPNIDVFELHHKLTNLEYFPLD 248

BLAST of Lsi09G003360 vs. NCBI nr
Match: XP_023522249.1 (transcription factor bHLH118-like [Cucurbita pepo subsp. pepo] >XP_023534748.1 transcription factor bHLH118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259.6 bits (662), Expect = 2.5e-65
Identity = 141/221 (63.80%), Postives = 171/221 (77.38%), Query Frame = 0

Query: 4   VPQLPFEI---HSNTVSQNLKNGRRKKPPPNTFDDKGDGSSNEHKKKKIIHRDVERQRRQ 63
           VPQ P      ++ + +Q  KNGRRK PP N+ DD GD + NEHKKKKI+HRDVERQRRQ
Sbjct: 30  VPQFPSISPLDNNKSGTQKPKNGRRKNPPANSSDDIGDMNPNEHKKKKIMHRDVERQRRQ 89

Query: 64  EMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKKQSNNQN 123
           +M++LY+TLRSLLP EYLKGKRSICDHM E VKYIR+MQS+IQ+L +KR+ELK+ S ++N
Sbjct: 90  DMASLYATLRSLLPHEYLKGKRSICDHMLEAVKYIRHMQSRIQDLSNKRDELKRVS-DKN 149

Query: 124 PDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNILEALIDEGFEILSCN 183
           P     ETL+SSKR+ VLVRARN SGGVQV+L+TATQ  LP+SNIL  L  EG EILS  
Sbjct: 150 PVATMVETLDSSKRESVLVRARNESGGVQVVLNTATQHNLPVSNILRDLATEGLEILSYI 209

Query: 184 SNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLEYF 222
           S K+ND F+HTIE Q +  S   P ID+S+LQ+KL NLEYF
Sbjct: 210 STKVNDSFIHTIECQTLVDSNHTPSIDVSELQHKLMNLEYF 249

BLAST of Lsi09G003360 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 9.8e-28
Identity = 76/209 (36.36%), Postives = 130/209 (62.20%), Query Frame = 0

Query: 19  NLKNGRRKKPPPNTFDDKGDGSS-------NEHKKKKIIHRDVERQRRQEMSTLYSTLRS 78
           N K  +R++P  +  +  G G S       +  KKKK++HRD+ERQRRQEM+TL++TLR+
Sbjct: 8   NPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRT 67

Query: 79  LLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKK---QSNNQNPDMVETET 138
            LP++Y+KGKR++ DH+   V +I+  +++I+EL  +R+EL +   Q    NPD  +T +
Sbjct: 68  HLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGS 127

Query: 139 LNSSKRDKVLVRARNGSGGVQVIL--DTATQQRLPLSNILEALIDEGFEILSCNSNKIND 198
            +  K +   V  +    G++V++  +++  + LPLS +LE + ++G E++S  + ++ND
Sbjct: 128 -DVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVND 187

Query: 199 RFLHTIESQPVFTSAQCPIIDISDLQYKL 216
           R +HTI+ +    S  C  ID+  LQ KL
Sbjct: 188 RLMHTIQVE--VNSFGC--IDLLWLQQKL 211

BLAST of Lsi09G003360 vs. TAIR 10
Match: AT5G51790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 66/201 (32.84%), Postives = 116/201 (57.71%), Query Frame = 0

Query: 17  SQNLKNGRRKKPPPNTFDDKGDGSSNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPIE 76
           S N K  R +   P   D+         K+KK++HR++ERQRRQEM+ L+++LRS LP++
Sbjct: 4   SNNPKKTRHQSHMPQERDE-------TKKEKKLLHRNIERQRRQEMAILFASLRSQLPLK 63

Query: 77  YLKGKRSICDHMQETVKYIRYMQSKIQELCDKREELKKQSNNQNPDMVETETLNSSKRDK 136
           Y+KGKR++ DH+   V +I+  Q++I++L  +R+ELK++  +            SS+ + 
Sbjct: 64  YIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEP 123

Query: 137 VLVRARNGSGGVQVILDTATQ--QRLPLSNILEALIDEGFEILSCNSNKINDRFLHTIES 196
             V  +    G +V++ +     +  PLS +LE L  +G E++S  + ++N+R ++TI+ 
Sbjct: 124 ASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQV 183

Query: 197 QPVFTSAQCPIIDISDLQYKL 216
           +    S  C   D++ LQ KL
Sbjct: 184 E--VNSFDC--FDLAWLQQKL 193

BLAST of Lsi09G003360 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 63/179 (35.20%), Postives = 111/179 (62.01%), Query Frame = 0

Query: 47  KKIIHRDVERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELC 106
           +K++HR+ ERQRRQEM++LY++LRSLLP+ ++KGKRS  D + E V YI+Y+Q KI+EL 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 107 DKREELKKQS-----NNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLP 166
            +R++L   S      + N D  E   + S K   V+   R    GV+++L +      P
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVV---RQCLVGVEIMLSSRCCGGQP 121

Query: 167 -LSNILEALIDEGFEILSCNSNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLTNLE 220
             S++L+ L + G  +L+  S+ ++DR ++TI+++    +    +ID+++L+ +L  ++
Sbjct: 122 RFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAE---VNDMALMIDLAELEKRLIRMK 174

BLAST of Lsi09G003360 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 4.4e-20
Identity = 56/170 (32.94%), Postives = 101/170 (59.41%), Query Frame = 0

Query: 47  KKIIHRDVERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELC 106
           +K++H+++E++RRQEM++LY++LRSLLP+E+++GKRS  D ++  V YI Y+Q  I+++ 
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 107 DKREELKKQSNNQNPDMVETETLNSSKRDKVLVRARNGSGGVQVILDTATQQRLPLSNIL 166
            KR++L   S        E E    S      V  R    G++++L      + P S++L
Sbjct: 62  SKRDDLVLLSGRSFRSSNEQEWNEISNH----VVIRPCLVGIEIVLSIL---QTPFSSVL 121

Query: 167 EALIDEGFEILSCNSNKINDRFLHTIESQPVFTSAQCPIIDISDLQYKLT 217
           + L + G  +L    + +NDR +HT++++         +ID++DL+  LT
Sbjct: 122 QVLREHGLYVLGYICSSVNDRLIHTLQAE----VNDLALIDLADLKDTLT 160

BLAST of Lsi09G003360 vs. TAIR 10
Match: AT1G62975.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 9.8e-20
Identity = 69/194 (35.57%), Postives = 112/194 (57.73%), Query Frame = 0

Query: 35  DKGDGSSNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPIEYLKGKRSICDHMQETVKY 94
           ++ + + ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKRS  DH+ + V Y
Sbjct: 62  NEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNY 121

Query: 95  IRYMQSKIQELCDKREELKK--QSNNQNPDMVE--TETLNSSKR-----------DK-VL 154
           I+ +Q KI+EL +KR  +KK   +       +E  T +L+SS             DK + 
Sbjct: 122 IKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHIT 181

Query: 155 VRARNGSGGVQVILDTAT-QQRLPLSNILEALIDE-GFEILSCNSNKINDRFLHTIESQP 211
           V       GV++I+     + +  LS++L+ L  E  F ++SC S +   RF+HTI SQ 
Sbjct: 182 VVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQ- 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9STJ61.4e-2636.36Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=... [more]
Q9FLI01.7e-2132.84Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=... [more]
Q9FLI11.5e-2035.20Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1[more]
Q9STJ76.2e-1932.94Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=... [more]
Q9LQ081.4e-1835.57Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
A0A5A7TLF78.8e-9380.09Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3ATY18.8e-9380.09transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103482687 PE=4 SV... [more]
A0A0A0KKN93.1e-9080.09BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G157220 PE=4 S... [more]
A0A6J1H5581.3e-6764.73transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111459679 ... [more]
A0A6J1K9B61.6e-6564.29transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111491282 PE... [more]
Match NameE-valueIdentityDescription
XP_008437182.11.8e-9280.09PREDICTED: transcription factor bHLH36-like [Cucumis melo] >KAA0042816.1 transcr... [more]
XP_004147594.16.4e-9080.09transcription factor bHLH36 [Cucumis sativus] >KGN50163.1 hypothetical protein C... [more]
XP_022958459.12.6e-6764.73transcription factor bHLH118-like [Cucurbita moschata] >KAG6606137.1 Transcripti... [more]
XP_038875626.11.3e-6662.56transcription factor bHLH118-like [Benincasa hispida][more]
XP_023522249.12.5e-6563.80transcription factor bHLH118-like [Cucurbita pepo subsp. pepo] >XP_023534748.1 t... [more]
Match NameE-valueIdentityDescription
AT4G25410.19.8e-2836.36basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT5G51790.11.2e-2232.84basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT5G51780.11.0e-2135.20basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT4G25400.14.4e-2032.94basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT1G62975.19.8e-2035.57basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..49
NoneNo IPR availablePANTHERPTHR13935:SF110HELIX-LOOP-HELIX DNA-BINDING SUPERFAMILY PROTEIN, PUTATIVE-RELATEDcoord: 19..218
NoneNo IPR availableCDDcd18914bHLH_AtORG2_likecoord: 47..120
e-value: 6.9247E-28
score: 99.2999
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 52..104
e-value: 2.6E-5
score: 33.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 48..99
e-value: 3.8E-9
score: 36.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 46..98
score: 13.166611
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 38..128
e-value: 4.0E-13
score: 51.0
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 38..113
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 19..218

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G003360.1Lsi09G003360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:2000112 regulation of cellular macromolecule biosynthetic process
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0090575 RNA polymerase II transcription regulator complex
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity