Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGACCCCACCCTTTTCTCTTTCTGCAGTGAATTAAAATAATAATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGTAACAATGAGCTACTAGATATTTAAGTATTTCTGTTCTCATTCATACTGTTATGAACGTACAACACAAATCTGTTTTTACAAGTCCATGGAACCTACCTGCAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGGTAATTCTATCTAGATCATCCCTCCAATTCATATTCTATCGTTCTAAAACATTGAGAAACCTAATTATCATTTGACAGAGTGGAAGAACATGGAGATTCCCTTATCCAAGGGTTGCACCTTCATTGACATCAGAAATGAAGAAAGAAAAACAATACAGTTAAGCATAAATAAACTCAGTACCTGATACTTTCAATTGTATTGAAAAGAAAAAAATAGATCTTAATCATATCAAATGCAACTCTTTTACAGGAAGGCACAAATTATAATTGAACCACAAATAAAAGCAGGACATCTAATCTTGGTAAGTATACAAGCCATCATTTCCAACAATGTCAAAGCATTCAACACTTAAAATTGAGTAAAATCATTCAATGCCCATTCAATTGAAATCAAAGTAAATTGTGTGTATTAACAAATGTTCAATTTGTTGGTCTGATGGGGCTTTTTCTGTAACTAATATCAGGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGTAAGTTAAATTTAATACCTTATGCCATAGATCTCCGTGAGCAAAAGCTTCTTACTAAACATTAAAGATACATGAACTATGTCTCCTGTAGGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAATGTACTCAAATTTTTACATCAAGTTATAAAGTCTTTCAAGTAAAGGATACATCATATACACACACAAAGCTTTATTCTATTCGTGGACATGGAAAAGATAGTACCCATACAAAACATCCCCTTCTAGTCATCATTTCCATCACGACTCAAATACGTTTCTAACAATGAGAAAACAGCCAATGGACCAAGAAGGGGAGGGAGTGGTGGAGGCTTACTGAACGCTGCAATTGGGTCTGCATCCTCTTTGATAACCACCGACTCTCCCTCAGAATCATTCTTCATTCCTTGCTTTTGTATTGATGAAGCCAGACTACCTAATTGTCATGAAATTGCAATGTAA
mRNA sequence
AAAGGACCCCACCCTTTTCTCTTTCTGCAGTGAATTAAAATAATAATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGAGTGGAAGAACATGGAGATTCCCTTATCCAAGGGTTGCACCTTCATTGACATCAGAAATGAAGAAAGAAAAACAATACAGAAGGCACAAATTATAATTGAACCACAAATAAAAGCAGGACATCTAATCTTGGTAAGTATACAAGCCATCATTTCCAACAATGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAATTCATCATTTCCATCACGACTCAAATACGTTTCTAACAATGAGAAAACAGCCAATGGACCAAGAAGGGGAGGGAGTGGTGGAGGCTTACTGAACGCTGCAATTGGGTCTGCATCCTCTTTGATAACCACCGACTCTCCCTCAGAATCATTCTTCATTCCTTGCTTTTGTATTGATGAAGCCAGACTACCTAATTGTCATGAAATTGCAATGTAA
Coding sequence (CDS)
ATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGAGTGGAAGAACATGGAGATTCCCTTATCCAAGGGTTGCACCTTCATTGACATCAGAAATGAAGAAAGAAAAACAATACAGAAGGCACAAATTATAATTGAACCACAAATAAAAGCAGGACATCTAATCTTGGTAAGTATACAAGCCATCATTTCCAACAATGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAATTCATCATTTCCATCACGACTCAAATACGTTTCTAACAATGAGAAAACAGCCAATGGACCAAGAAGGGGAGGGAGTGGTGGAGGCTTACTGAACGCTGCAATTGGGTCTGCATCCTCTTTGATAACCACCGACTCTCCCTCAGAATCATTCTTCATTCCTTGCTTTTGTATTGATGAAGCCAGACTACCTAATTGTCATGAAATTGCAATGTAA
Protein sequence
MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFIDIRNEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKVSQQRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLYINSSFPSRLKYVSNNEKTANGPRRGGSGGGLLNAAIGSASSLITTDSPSESFFIPCFCIDEARLPNCHEIAM
Homology
BLAST of Lsi09G002290 vs. ExPASy TrEMBL
Match:
A0A0A0KMI4 (SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 PE=4 SV=1)
HSP 1 Score: 399.1 bits (1024), Expect = 2.0e-107
Identity = 226/316 (71.52%), Postives = 243/316 (76.90%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSC-TSLTKRTSCILQQ-KNYGNCKLRKTNNRLSTDVK 60
MSL T+ PQAVN GSQS RRFS T L KRTSCI QQ KNYGN RKTNN L
Sbjct: 1 MSLITS--PQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTL----- 60
Query: 61 LHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEP 120
V SCL DDSFS SSSNSP E+IERFYKCINEKNLKE+S YISEDCLIEDS FIE
Sbjct: 61 ---VLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEK 120
Query: 121 FIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFID 180
F GKKAA+SF E+LT+SMGPDVK ++ +YE S A AIW+LEW+NMEIPL+KGCTFID
Sbjct: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFID 180
Query: 181 IRNEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKV 240
IR+EERKTIQK QII EPQ KAGHLIL IMK+VTLLLA AI EWLIK
Sbjct: 181 IRDEERKTIQKIQIINEPQFKAGHLIL----------DIMKLVTLLLAKNSAILEWLIKA 240
Query: 241 SQQRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLYINSSFPSRLKYVSNNEKTANG 300
SQQRWV WMSKIC+ LF LLDSF KSYLTFIHF AQLY SSFPSR+KY+SN EKTANG
Sbjct: 241 SQQRWVKWMSKICVTLFNLLLDSFSKSYLTFIHFGAQLYSCSSFPSRVKYISNEEKTANG 296
Query: 301 PRRGGSGGGLLNAAIG 315
PR GGSGGGLLNA IG
Sbjct: 301 PRMGGSGGGLLNATIG 296
BLAST of Lsi09G002290 vs. ExPASy TrEMBL
Match:
A0A1S3ATV9 (uncharacterized protein LOC103482777 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482777 PE=4 SV=1)
HSP 1 Score: 330.9 bits (847), Expect = 6.6e-87
Identity = 190/279 (68.10%), Postives = 210/279 (75.27%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSCT-SLTKRTSCILQQ-KNYGNCKLRKTNNRLSTDVK 60
MSL T+ PQAVN GS S RRFS T L KRTSCI QQ KNYGN RKTN RL
Sbjct: 1 MSLITS--PQAVNFGGSPSFRRFSYTLFLNKRTSCIFQQKKNYGNYNKRKTNVRL----- 60
Query: 61 LHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEP 120
VSSCL DDSFS SSSNSP E+IE FYKCINEKNLK+++ YISEDCLIEDS FIE
Sbjct: 61 ---VSSCLMDDSFSYSSSSSNSPGEMIEMFYKCINEKNLKKMNTYISEDCLIEDSLFIEK 120
Query: 121 FIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFID 180
F GKKAA+SF E+LT+SMGPDVK ++ +YE S A AIW+LEW+NMEIPL+KGCTFID
Sbjct: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRTVYERRPSMAGAIWHLEWRNMEIPLTKGCTFID 180
Query: 181 IRNEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKV 240
IR+EERKTIQ QII E Q+KAGHL L AIMK+VTLLLA +PAI EWL KV
Sbjct: 181 IRDEERKTIQMVQIITESQLKAGHLFL----------AIMKLVTLLLAKHPAILEWLTKV 240
Query: 241 SQQRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLY 278
SQQRWV +SKICI LFK LLD+FLKSYLTFIH QLY
Sbjct: 241 SQQRWVKRISKICIFLFKHLLDNFLKSYLTFIHLGTQLY 259
BLAST of Lsi09G002290 vs. ExPASy TrEMBL
Match:
A0A6J1I4H1 (uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081 PE=4 SV=1)
HSP 1 Score: 317.0 bits (811), Expect = 9.8e-83
Identity = 171/278 (61.51%), Postives = 212/278 (76.26%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLH 60
M+L T+ PPQA+ L GSQ R F+ TS+ K+ S + QQK KLRKT+ L TDVK
Sbjct: 1 MALITSPPPQALTL-GSQPFRTFAYTSIPKKPSSLFQQK-----KLRKTSYTLVTDVKPR 60
Query: 61 FVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFI 120
FV SCLKD S SLDS SNSPSE++++FY+CINEK LKELS+YISEDCLIEDS F E FI
Sbjct: 61 FVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFI 120
Query: 121 GKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFIDIR 180
GK+AAL FF+ELTQSMGPDVK + ++YE G SRA A W+L WKN +IP +KGCTFIDI
Sbjct: 121 GKEAALKFFKELTQSMGPDVKFRFRNVYESGTSRAGATWHLVWKNTKIPFTKGCTFIDIN 180
Query: 181 NEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKVSQ 240
NEER TIQKAQII+EPQ+KAGHLIL +MK+VT LLA YPAI +W++K+SQ
Sbjct: 181 NEER-TIQKAQIIMEPQVKAGHLIL----------GMMKLVTSLLAQYPAIHKWVMKLSQ 240
Query: 241 QRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLYI 279
QRWV W++KIC++L+K L S ++SYLTFIH + +++
Sbjct: 241 QRWVRWLAKICVVLYKFFLHSLMRSYLTFIHCGSLMFV 261
BLAST of Lsi09G002290 vs. ExPASy TrEMBL
Match:
A0A6J1ELY0 (uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC111435747 PE=4 SV=1)
HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 170/278 (61.15%), Postives = 211/278 (75.90%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLH 60
M+L T+ PPQA+ L GSQ R F+ TS+ KR S + QQK KLRKT+ L+TDVK
Sbjct: 1 MALITSPPPQALTL-GSQPFRTFAYTSIPKRPSYLFQQK-----KLRKTSYTLATDVKPR 60
Query: 61 FVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFI 120
FVSSCLKD S SLDS SNSPSE++++ Y+CINEK LKELS+Y+SEDCLIEDS F E FI
Sbjct: 61 FVSSCLKDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFI 120
Query: 121 GKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFIDIR 180
GK+AAL FF+ELTQSMGPDVK + ++YE GASRA W+L WKN +IP +KGCTFI I
Sbjct: 121 GKEAALKFFKELTQSMGPDVKFRFRNVYESGASRAGVTWHLVWKNTKIPFTKGCTFIHIN 180
Query: 181 NEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKVSQ 240
NE+R TIQKAQIIIEPQ+KAGHLIL +MK+VT LLA YPAI +W++K+SQ
Sbjct: 181 NEQR-TIQKAQIIIEPQVKAGHLIL----------GMMKLVTSLLAQYPAIHKWVMKLSQ 240
Query: 241 QRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLYI 279
QRWV W++KIC++L+ L S L+SYLTFIH + +++
Sbjct: 241 QRWVRWVAKICVLLYNFFLHSLLRSYLTFIHCASLMFV 261
BLAST of Lsi09G002290 vs. ExPASy TrEMBL
Match:
A0A6J1DVV2 (uncharacterized protein LOC111023569 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 4.7e-77
Identity = 165/278 (59.35%), Postives = 203/278 (73.02%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQK-----NYGNCKLRKTNNRLST 60
M+L + PP ++ GSQS R T+L K +SC+ QQK YG+ +RKTN R ST
Sbjct: 1 MALIRSPPPISL---GSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDW-MRKTNKRSST 60
Query: 61 DVKLHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSF 120
DVKL FV SCL DDS S LDS+SN SE+IE FY+CINEKNL+EL +YISEDC+IEDS F
Sbjct: 61 DVKLRFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLF 120
Query: 121 IEPFIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCT 180
IEPF G+K AL FFEELTQSMG VK ++ ++YE G S A AIW L WK++EIP SKGCT
Sbjct: 121 IEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCT 180
Query: 181 FIDIRNEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWL 240
FI+IRNE+R+ IQKAQII+EPQ+KAGH IL A++K+VT LL T+PAIPEWL
Sbjct: 181 FINIRNEKRRAIQKAQIIVEPQVKAGHFIL----------ALLKLVTSLLDTFPAIPEWL 240
Query: 241 IKVSQQRWVMWMSKICIILFKRLLDSFLKSYLTFIHFW 274
+K+ Q WV W+SKICI LF L +SFL+S L F + +
Sbjct: 241 LKLFQLPWVKWLSKICIKLFTLLWESFLESLLAFKYLY 264
BLAST of Lsi09G002290 vs. NCBI nr
Match:
XP_038906943.1 (uncharacterized protein LOC120092809 [Benincasa hispida])
HSP 1 Score: 433.7 bits (1114), Expect = 1.5e-117
Identity = 227/273 (83.15%), Postives = 239/273 (87.55%), Query Frame = 0
Query: 8 PPQAVNLRGSQSSRRFSCTSLTKRTSCILQQ-KNYGNCKLRKTNNRLSTDVKLHFVSSCL 67
PPQAVNL GSQS RRFSCT LTKR+SCILQQ KNYGNCK +KTNNRLSTDVKLHFVSSCL
Sbjct: 9 PPQAVNLGGSQSLRRFSCTFLTKRSSCILQQKKNYGNCKKKKTNNRLSTDVKLHFVSSCL 68
Query: 68 KDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAAL 127
KDDSFS LDS SNSPSE+IERFYKCINEKNLKELS+YISEDC IEDS F+EPFIGKKAAL
Sbjct: 69 KDDSFSRLDSRSNSPSEMIERFYKCINEKNLKELSSYISEDCHIEDSLFVEPFIGKKAAL 128
Query: 128 SFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFIDIRNEERKT 187
FFEELT SMGPDVK ++H+IYE S AIW+LEWKNMEIP +KGCTFIDIRNEERKT
Sbjct: 129 RFFEELTHSMGPDVKFRIHNIYERRVSSVGAIWHLEWKNMEIPFTKGCTFIDIRNEERKT 188
Query: 188 IQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKVSQQRWVMW 247
IQKAQIIIEPQIKAGHLIL AIMK+VTLLLA YPAIPEWLIKVSQQRWV W
Sbjct: 189 IQKAQIIIEPQIKAGHLIL----------AIMKLVTLLLAKYPAIPEWLIKVSQQRWVKW 248
Query: 248 MSKICIILFKRLLDSFLKSYLTFIHFWAQLYIN 280
MSKICIILFK LLDSFLKSYLTFIHF A+LY N
Sbjct: 249 MSKICIILFKLLLDSFLKSYLTFIHFGAELYSN 271
BLAST of Lsi09G002290 vs. NCBI nr
Match:
XP_011654728.2 (uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetical protein Csa_000137 [Cucumis sativus])
HSP 1 Score: 342.0 bits (876), Expect = 5.9e-90
Identity = 196/279 (70.25%), Postives = 211/279 (75.63%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSC-TSLTKRTSCILQQ-KNYGNCKLRKTNNRLSTDVK 60
MSL T+ PQAVN GSQS RRFS T L KRTSCI QQ KNYGN RKTNN L
Sbjct: 1 MSLITS--PQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTL----- 60
Query: 61 LHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEP 120
V SCL DDSFS SSSNSP E+IERFYKCINEKNLKE+S YISEDCLIEDS FIE
Sbjct: 61 ---VLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEK 120
Query: 121 FIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFID 180
F GKKAA+SF E+LT+SMGPDVK ++ +YE S A AIW+LEW+NMEIPL+KGCTFID
Sbjct: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFID 180
Query: 181 IRNEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKV 240
IR+EERKTIQK QII EPQ KAGHLIL IMK+VTLLLA AI EWLIK
Sbjct: 181 IRDEERKTIQKIQIINEPQFKAGHLIL----------DIMKLVTLLLAKNSAILEWLIKA 240
Query: 241 SQQRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLY 278
SQQRWV WMSKIC+ LF LLDSF KSYLTFIHF AQLY
Sbjct: 241 SQQRWVKWMSKICVTLFNLLLDSFSKSYLTFIHFGAQLY 259
BLAST of Lsi09G002290 vs. NCBI nr
Match:
XP_008437322.1 (PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo])
HSP 1 Score: 330.9 bits (847), Expect = 1.4e-86
Identity = 190/279 (68.10%), Postives = 210/279 (75.27%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSCT-SLTKRTSCILQQ-KNYGNCKLRKTNNRLSTDVK 60
MSL T+ PQAVN GS S RRFS T L KRTSCI QQ KNYGN RKTN RL
Sbjct: 1 MSLITS--PQAVNFGGSPSFRRFSYTLFLNKRTSCIFQQKKNYGNYNKRKTNVRL----- 60
Query: 61 LHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEP 120
VSSCL DDSFS SSSNSP E+IE FYKCINEKNLK+++ YISEDCLIEDS FIE
Sbjct: 61 ---VSSCLMDDSFSYSSSSSNSPGEMIEMFYKCINEKNLKKMNTYISEDCLIEDSLFIEK 120
Query: 121 FIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFID 180
F GKKAA+SF E+LT+SMGPDVK ++ +YE S A AIW+LEW+NMEIPL+KGCTFID
Sbjct: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRTVYERRPSMAGAIWHLEWRNMEIPLTKGCTFID 180
Query: 181 IRNEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKV 240
IR+EERKTIQ QII E Q+KAGHL L AIMK+VTLLLA +PAI EWL KV
Sbjct: 181 IRDEERKTIQMVQIITESQLKAGHLFL----------AIMKLVTLLLAKHPAILEWLTKV 240
Query: 241 SQQRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLY 278
SQQRWV +SKICI LFK LLD+FLKSYLTFIH QLY
Sbjct: 241 SQQRWVKRISKICIFLFKHLLDNFLKSYLTFIHLGTQLY 259
BLAST of Lsi09G002290 vs. NCBI nr
Match:
XP_022970084.1 (uncharacterized protein LOC111469081 [Cucurbita maxima])
HSP 1 Score: 317.0 bits (811), Expect = 2.0e-82
Identity = 171/278 (61.51%), Postives = 212/278 (76.26%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLH 60
M+L T+ PPQA+ L GSQ R F+ TS+ K+ S + QQK KLRKT+ L TDVK
Sbjct: 1 MALITSPPPQALTL-GSQPFRTFAYTSIPKKPSSLFQQK-----KLRKTSYTLVTDVKPR 60
Query: 61 FVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFI 120
FV SCLKD S SLDS SNSPSE++++FY+CINEK LKELS+YISEDCLIEDS F E FI
Sbjct: 61 FVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFI 120
Query: 121 GKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFIDIR 180
GK+AAL FF+ELTQSMGPDVK + ++YE G SRA A W+L WKN +IP +KGCTFIDI
Sbjct: 121 GKEAALKFFKELTQSMGPDVKFRFRNVYESGTSRAGATWHLVWKNTKIPFTKGCTFIDIN 180
Query: 181 NEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKVSQ 240
NEER TIQKAQII+EPQ+KAGHLIL +MK+VT LLA YPAI +W++K+SQ
Sbjct: 181 NEER-TIQKAQIIMEPQVKAGHLIL----------GMMKLVTSLLAQYPAIHKWVMKLSQ 240
Query: 241 QRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLYI 279
QRWV W++KIC++L+K L S ++SYLTFIH + +++
Sbjct: 241 QRWVRWLAKICVVLYKFFLHSLMRSYLTFIHCGSLMFV 261
BLAST of Lsi09G002290 vs. NCBI nr
Match:
XP_022929026.1 (uncharacterized protein LOC111435747 [Cucurbita moschata])
HSP 1 Score: 312.8 bits (800), Expect = 3.8e-81
Identity = 170/278 (61.15%), Postives = 211/278 (75.90%), Query Frame = 0
Query: 1 MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLH 60
M+L T+ PPQA+ L GSQ R F+ TS+ KR S + QQK KLRKT+ L+TDVK
Sbjct: 1 MALITSPPPQALTL-GSQPFRTFAYTSIPKRPSYLFQQK-----KLRKTSYTLATDVKPR 60
Query: 61 FVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFI 120
FVSSCLKD S SLDS SNSPSE++++ Y+CINEK LKELS+Y+SEDCLIEDS F E FI
Sbjct: 61 FVSSCLKDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFI 120
Query: 121 GKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFIDIR 180
GK+AAL FF+ELTQSMGPDVK + ++YE GASRA W+L WKN +IP +KGCTFI I
Sbjct: 121 GKEAALKFFKELTQSMGPDVKFRFRNVYESGASRAGVTWHLVWKNTKIPFTKGCTFIHIN 180
Query: 181 NEERKTIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKVSQ 240
NE+R TIQKAQIIIEPQ+KAGHLIL +MK+VT LLA YPAI +W++K+SQ
Sbjct: 181 NEQR-TIQKAQIIIEPQVKAGHLIL----------GMMKLVTSLLAQYPAIHKWVMKLSQ 240
Query: 241 QRWVMWMSKICIILFKRLLDSFLKSYLTFIHFWAQLYI 279
QRWV W++KIC++L+ L S L+SYLTFIH + +++
Sbjct: 241 QRWVRWVAKICVLLYNFFLHSLLRSYLTFIHCASLMFV 261
BLAST of Lsi09G002290 vs. TAIR 10
Match:
AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein )
HSP 1 Score: 110.5 bits (275), Expect = 2.7e-24
Identity = 72/213 (33.80%), Postives = 116/213 (54.46%), Query Frame = 0
Query: 72 SSLDSSSNSPSEI-----IERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAAL 131
S LD ++ P++I + +FY INEKN +LS+ IS DC I+D SF +PF GK+ A+
Sbjct: 61 SCLDRPNSRPNQISGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEAM 120
Query: 132 SFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFIDIRNE-ERK 191
FFEEL +SMG +VK V ++ E A W+LEWK +IP ++GC+F + +E R
Sbjct: 121 EFFEELVKSMGQNVKFCVENVCEGDGHSAAVNWHLEWKGRKIPFTRGCSFYEFIDEGGRL 180
Query: 192 TIQKAQIIIEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPEWLIKVSQQRWVM 251
I+ A+I+IE IK G + L +++K +T L +P E ++ +
Sbjct: 181 VIRNARILIESPIKPGGITL----------SLLKNITFLFDEFPKGAELFLE-KPYAIIQ 240
Query: 252 WMSKICIILFKRLLDSFLKSYLTFIHFWAQLYI 279
+I + L++ + SYL + A+ ++
Sbjct: 241 AAIRIYGLFLAPLINHVMASYLKLLSNMAEFFL 262
BLAST of Lsi09G002290 vs. TAIR 10
Match:
AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein )
HSP 1 Score: 91.7 bits (226), Expect = 1.3e-18
Identity = 50/160 (31.25%), Postives = 84/160 (52.50%), Query Frame = 0
Query: 75 DSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAALSFFEELTQ 134
+++ S SE++ FY +N +L +++ I++DC+ ED F PF+G+KA L FF + +
Sbjct: 65 ETAPTSASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIE 124
Query: 135 SMGPDVKIKVHHIYEIGASRAIAIWNLEWKNMEIPLSKGCTFIDIR-NEERKTIQKAQII 194
S D++ + I +S W+LEWK P SKGC+F + + ++ I +
Sbjct: 125 STSTDLQFVIDDISTEDSSAVGVSWHLEWKGKNFPFSKGCSFYRLEVIDGKRQIVYGRDC 184
Query: 195 IEPQIKAGHLILVSIQAIISNNAIMKVVTLLLATYPAIPE 234
+EP IK G +L +I K VT LL +P + +
Sbjct: 185 VEPAIKPGETVLAAI----------KGVTWLLQKFPQLAD 214
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KMI4 | 2.0e-107 | 71.52 | SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 ... | [more] |
A0A1S3ATV9 | 6.6e-87 | 68.10 | uncharacterized protein LOC103482777 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1I4H1 | 9.8e-83 | 61.51 | uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081... | [more] |
A0A6J1ELY0 | 1.8e-81 | 61.15 | uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC1114357... | [more] |
A0A6J1DVV2 | 4.7e-77 | 59.35 | uncharacterized protein LOC111023569 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
XP_038906943.1 | 1.5e-117 | 83.15 | uncharacterized protein LOC120092809 [Benincasa hispida] | [more] |
XP_011654728.2 | 5.9e-90 | 70.25 | uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetica... | [more] |
XP_008437322.1 | 1.4e-86 | 68.10 | PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo] | [more] |
XP_022970084.1 | 2.0e-82 | 61.51 | uncharacterized protein LOC111469081 [Cucurbita maxima] | [more] |
XP_022929026.1 | 3.8e-81 | 61.15 | uncharacterized protein LOC111435747 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT5G41470.1 | 2.7e-24 | 33.80 | Nuclear transport factor 2 (NTF2) family protein | [more] |
AT1G71480.1 | 1.3e-18 | 31.25 | Nuclear transport factor 2 (NTF2) family protein | [more] |