Lsi09G001810 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAACATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTACAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGACCACAGCAGTGATAGTGAAAATGAATGTCACAAACCCCATCACAACAAGAAGGTAAGTTTAATTTTCTTGCTTCGATTCTCTTATTTTGATTTCTTCGATATATAATTTCATGTCGGGTTTTACTATCATTGTAAAATAGAATTCGCCAAGTGTTTGATTGTTTACCTACGAAAACGTGAGTTGCTGGGTTTAGTTTTAGCATGTTGACAACCGTGTCATATGATAGTAATAACCGCTGATTTGCACAATTGATCATAGACATGGGTTGAAACGTATTGACATAAAGTCTATGACTTTCACGAGTTATGCTATGGCGTTCGTAATATACACTACTAGTTTGGGCAAGCACGCTCAACTGCAAAGTTTTGATAGGATCTTGTGCATTAGAGTTAGTATCTTTTTATAAATTTTTTTTTTTATTTGTATTTTCTCTTTGCTTTTATTATGTAATTATTTTGCCTGGATTTGCAGAACTGAATTGAGGGAGGAAGGTGAATGAAATGAAGGAACCAGTGGATGCCTCTAAACTACTACTGCTACTAAGTATTTGATACTACTGCTACTAAGAATTTGAGCGAAACAAAAATAAAGATCTAGATGGTAATTTATGCCTCCTACTGTACTTACTTATTTTTCCTCGTTTGAAATAAAACTTATGGATATATGAATCTAAAAATAGTTCAATAGATATGACATCAATTACTATTTTAAAAAGTCAATAGTTCGATTCTCCACTCACTCAAATAATATCCACTCTGTGCTTTTCAACCTCAAATGTACCTTGTACATAAAAAGAAAATGAAATTTCATTATTGATATTTGGAAACTAATATGTTCATGTAAAATGAATATGCAATTCACAAAAAAGTTGAATGAGAGGCATCTGAAATTCTGAATAAGGACTAAACAAAACAGTAAAACGGAAAAATGAGTTCCCAACTGTGCTCTATTGAACAAAACTAAAGGCGAGAAAAAGGAGAGGCATTAAAACTACTAGCAAACTTATGTAACCATGACAGCAAAACAACTTCCTTACACATTACAAAGAAAAGCAGCTATAACAACTTCCTTTACCAACCAAAAAAGTCCTCAGTAACCATGACAGCAAAACAAGAAAAATCAGGACACCTTCCGAGTTCGATTTCCTTCTCTTGAACTGTTTCCGTGGCTGTTTCGCATTCTTCTTAGCTTCGGTTTCCATTGCCACAGAATGAAACTCTTTTGGTGTTTCTGTTTCTCTGAAGATTTGTTGCTTATTTATTTGTTGAAGATTGGTTGTTTCTTTTTCCCTTAGCTGTAGCTAGCTCTCTGAACTCAACTGGAACGACAAGTGCAACCAAACAAAGCAAACAACTGATCAGCCATTGACTTGTAGTTATCAAGCTTCAACTATTTTACCCAAATGACCCTTCTCTCCTCTTTTACTTTTTTCATATATTATTAGAGCTTCTACCACTGTGAAAAAGAGAATATTACCTTCTGATTAAGGGTCAAAATCAAAATTTGAATATGTGGTGGGTACGATTAAATTTTGACCAAAAATCAAACCAAACCAATCTACGTTTGATCATAGAATCAGTTTGATTGTGCTTGTCTTTTGATATTAGGTCTGAAAGGTTGATGAGGACAAGGCCTACCATGTTGGGTATCTTGTTCTTTGGTCGGGTCCGGGTCGGGTTGGACTCTTTTATTGTTGAGTCGTGGAGCTAA ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAACATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTACAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGAAAGGTTGATGAGGACAAGGCCTACCATGTTGGGTATCTTGTTCTTTGGTCGGGTCCGGGTCGGGTTGGACTCTTTTATTGTTGAGTCGTGGAGCTAA ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAACATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTACAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGAAAGGTTGATGAGGACAAGGCCTACCATGTTGGGTATCTTGTTCTTTGGTCGGGTCCGGGTCGGGTTGGACTCTTTTATTGTTGAGTCGTGGAGCTAA MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGYWNPAYHHGQAPLISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHGQAPPASTSACTCKPAHHHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQINDVWSERLMRTRPTMLGILFFGRVRVGLDSFIVESWS Homology
BLAST of Lsi09G001810 vs. ExPASy TrEMBL
Match: A0A5A7TMV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001930 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 4.3e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Lsi09G001810 vs. ExPASy TrEMBL
Match: A0A1S3AUH3 (uncharacterized protein LOC103482815 OS=Cucumis melo OX=3656 GN=LOC103482815 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 4.3e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Lsi09G001810 vs. ExPASy TrEMBL
Match: A0A446RZ56 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_4Bv1G056060 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.4e-08 Identity = 65/176 (36.93%), Postives = 79/176 (44.89%), Query Frame = 0
BLAST of Lsi09G001810 vs. ExPASy TrEMBL
Match: A0A6J1CWW2 (uncharacterized protein LOC111015315 OS=Momordica charantia OX=3673 GN=LOC111015315 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06 Identity = 46/88 (52.27%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of Lsi09G001810 vs. ExPASy TrEMBL
Match: A0A080YUY5 (Uncharacterized protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF092800020CFD_c1 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.7e-04 Identity = 62/180 (34.44%), Postives = 74/180 (41.11%), Query Frame = 0
BLAST of Lsi09G001810 vs. NCBI nr
Match: XP_038875375.1 (uncharacterized protein LOC120067846 [Benincasa hispida]) HSP 1 Score: 109.4 bits (272), Expect = 6.0e-20 Identity = 55/69 (79.71%), Postives = 57/69 (82.61%), Query Frame = 0
BLAST of Lsi09G001810 vs. NCBI nr
Match: KAA0042689.1 (uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa] >TYK06092.1 uncharacterized protein E5676_scaffold376G001930 [Cucumis melo var. makuwa]) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Lsi09G001810 vs. NCBI nr
Match: XP_008437383.1 (PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Lsi09G001810 vs. NCBI nr
Match: VAI04104.1 (unnamed protein product [Triticum turgidum subsp. durum]) HSP 1 Score: 68.2 bits (165), Expect = 1.5e-07 Identity = 65/176 (36.93%), Postives = 79/176 (44.89%), Query Frame = 0
BLAST of Lsi09G001810 vs. NCBI nr
Match: XP_040256393.1 (histidine-rich glycoprotein-like [Aegilops tauschii subsp. strangulata]) HSP 1 Score: 64.7 bits (156), Expect = 1.7e-06 Identity = 54/138 (39.13%), Postives = 63/138 (45.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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