Lsi09G001500 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGGTATGACTTACGAAGATTTGAACTTCCGATTTTAAGAGAAAAAAAAATAGATTTGAACCTCCGATTTTAAAAAAAAAAAAAAAAAAATTTGTCAATTACGGTCAAAATACATTCACATTGACATATAAACTTTAGATTTATTGTTATGAAACATTAATGACACATATTCAATAGGTAAATTTTAGACAATCTAGCATGATGTGACAAATGGTTGAATAAATTACTAGATTTTTATCGCCAGTATGTCATTAATCATTTGTCCAAATAAATGCTATCAAATGCTATAAATATAGACTTACATCTAAATTGAAATAGATATTTATTTATTTAATAATTATTAATTTTATTAAACTCGAAAGTAATAATTGTATTAGATTAATTTAGATTTTTAACTTTAAAATAGAAAATTTCACACATGTATATGTCTTTTTTAAATGCATGAATAACTGTAATACTAGAGAAAAATGTTAGAATCAAATTAATAGATAATAGCAATTTTTCATAGTTTTTCATATTCTCTATTTTCCTTTATTTATTTTAGGATTAATTATATGATCATTTTCTTTTTACTTTGGTAGGAAGATTAAACCCTAAACAAATTTAACCTCTAAACTTAATTATAGGTGTGTCTAATAGGTCATTGAACTTTATAATATTAAATAGGCCCTTCAACTTTCAAATTGTGTCTAATAGATCTTTGATATATTCAACATTTAAAAAAGAAAAAAATTATGAATCTATTAGACATGATATTAAATTTTGTGTTTCGTAAGACATAAAAATTTTAGTTTTGTGTTTGATAAATTCATAATTTTTAAAAAATATTTTGTTTGATAGATTCGTGATTTTTTTTTAAATATTGAATTAATTGATAACTATTAGACTAAAAATAAAACCATTGACTTAATTATACACCAAATCAAAATTTTAGAGATTCAATAGACTTTTTTTTTTCTTCTTTGTTATTTTTTTTATAAAAAATATTGGATATATTTAAAATCTATTAATTACCAATTTGAAAGTTTGCAATCTTATTTAACATTTTTAAAATTCTCTAACCTATAAGATATAAAAGTTTTAAAGTATTAGTTACTCTTCAAAGTTTCAACCTCCTAAACAAGATAAAGTTATATAATTATCATGCAGTCATTTTGAACAAATTGTAAAAACCATTCATAAAGTAGACTGGTAATTGCAAATTTACAATTATACCCTCAAACTTTCAATTATAAAAATTGAACCATTAAACTTATACTAATATTAAAATTGAACCCTCAAACTTATACAACTTACCCTAGTCATTATTTGATGAAAGATCAAACTTATATTGATTACTATTTTTATTATTTTTTAGCTAAAGAAAATTAGGAGAAAATGAAATTATATAAATAAAGGGGTTATTTTTAAATATAGAAAAATAAATTAAACTATTTACATATATAGAATTTTTTTAATAGACAACGATAATAAAATTAAACTGATCTGAATTTTTCTTTTATATTTATAAATAGTTTTGATATTTTTTATATAGTAATTTCACTTAATAAAGTGAGTTGATAAATAGAAATCTGTCTCTACAATGAGGGCACAGGCAGTTCTTATTCTGTTCTTTGCAGAATGTTAATCCACAGCAATCCATAGACGCAAATTCTTGACTTCAATTCGATTTCTTCTCTTCCTTCATCTAAAGTTCGAAGGAAATTTTGCAGAAATGGAAGAGTATTAGAACGGTACTCACCTTTATATTTGATCCTCATACACTCTTTAGCTCATATTTTTCTACTCGTTCTTCCTTTGAGTTCGATGAATGATTTTTCATGTCTCTGTTGCTGATTTACTCTGATTTTGTTCCAATCTTCCAAGCCGAAGGTTCCATGGCTGTTATTCAAGTGAAAACTTAAATGCCCAAATTTTGTATGGTTTTTCTCGACATAATTTCATGAACTTTGCACTTCCATTAGTTGTTTTTGTAACTATTCTACCGTATTTATTCAATTTGTCTGTGGAATGAGAGCTTTTAAGTGGCTTGTTTTGTTTTATGTAATTTCTATTGCTTTATGGGTAATTTTGCTAGGTGTTGCTGCTTATTGGTGATCATTAAAATGCTATACAAATTCACCTTAGCTTTTTGTTGGAAATTTTTGCAAAGTATACTGTTGGATACATTGCTTAAATGAAGTGAAATTCATGATATTGAGTTAGTACCTTTTGTTACTGCAATTACCATACCTTTGCTTTTTCTTGGAAATTGTTGCCATGTACACTGTTTGGATACATTGCTTCAATGAAGTAAAATTCATAGTATTAAATCAGTACCTTTTGTTACTGCTACTGGGGTTGGTTTTTAATTTCCAATGGCTGTAAACTACACTGCTATTCTATATAGATAAGCATAATTGCTTTTACATTCATCAAAATGGGAGGCTCATCCCAATCCAACTCAATTTTATAAGGTTGGGTTGGTTGGATTTATAAAGCAGCTAAAATTGATTTCGGTCTATTCTTAACTCCAATTGAACCGTGCAATCTGTGAATAGCTCCATACACATGCACACACACGCGCGTATAACAAGTTTCTTAAGTTTTTGATGCTTAGAAGTTGTCTTCAATCTTATTAAATCTTGATATTACTAAGTTTCTAGTTCAAACAAGGTGGTGGAAATTCGAACGTGACCTTTAGGAGAGGTTGATAATGCAACCAATTTAAGTTTCTAGTTTGAATTGCTAATACATTCCCTGTATGCAATAAGTTCCCCAATCTTAAAAATAAATTTTTGCAAACCATTTTCCTCTTTGAAATGAATGACTGTTTATTTCTGGTAACAACTCTAAACTTAGTTCTTCTAGATCCTGTATTTTTATTTTATTATAAATGAAGGTTGTTAGTTGTTTTATGTGATCTTGTTGCTATTGGTCTGATTGATATTTATCAGAAGCTACTGATTTATGAAGTATCCTTTACCAAATGTAACATGGTTGTTCAAATTAAATCTTGATGGTTATGCTCATTGTTTGTAACTCAAAGATTTTCGATTGTTGGTTTGCATAGACAAGGAAACTGACGTATAAAATCCTGCTTTCTACACATTTTCAGTTTTTGTGGTTGATATAAGCCACTTTCTTGTAGCTGAAAGGTGTTTTGAAGTTTCATAAATTCAACTGCGCAAAACATGGATATTGCCCTGCCCCTTAAAGAGGGCAGAGCTGAAACATATTCCAGCTACAGTAAACTTGACATGGCCATAGTTTGTGCAACAAATGAGTGGAGTGGAAATAGCAACTCAATATTCTTTAATCTATAAGATTGAAGTAAATTTCCTATCGGGGAGCTTGCTCAGAATTGTCTGCGGTTGGCCCCTGCTTGGATTGCTGTTCTGAAAATGTTCAACTGAGGTTTCATCTCTCTGCAAAATGAATTTTTGACACATTTGGGCTCTGCTTGATATCCTATTCATGTACTTTAGTCCCATCTTAATTTGAAACTATCTTTGAAGTACATGGAGAGAGCTAATAGGTGTTGAATGCAGATTCAGAAAAAGGGTTGTTTACATCCGAAGCAATGTCCATACTGCCCAGTGTCAAATTTGCAGATTTAAGCCCCACAAAAGATGTTTTTGTTTCAGCCCTCCGCTTTGCTTTGTCAATTAACAGCCCATGTGCCCCATTTGGAGATGAGCTTCAAAAATCTGCTCAGGAACAAGTTGACTACATGTTAAGGGTAGATGCGGACACGTCGCTGGTAATAACCGACGATGAAGTAAAATCCGTGTTAAAAACGGGCCTTTTTAGAACTTGTGCATCATTTGAGATGGAGCTATCTTCCCTACTTTTGGAGTCTGACCTTGCATCTCAAGTCAACGAAGACAAAATATTGAGGACATTATCGGATCTTGAATGGATATGTACTTTACTTCCAAAGATGAACTTAATGAAAGACTTTGTTTCCAACTGGATTGAGATATCTGGGAACGTTCTGAAGATAATCGAGGACGAAAAGTTGAATTCCTTAATGTGGGGTTTGAAAGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACCGTGATTCTTCCTGCACCGTACCGGTTGTCGCTGCTTAAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTGGATTCGAAGTGCATCGGAGAGACAGATTTTCATTACAGGATGGACGAAGAACTGTGCATGAACATCGAGGGGGCAATTGTTTCTATGGTATTGGCATTGCCTTCAAATGATCAAGCAGGTATCTTGGCAGACTGGATGAAAGCTGAGGAAATACAATATCCTGATTTAACAGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCTCTGACAATGGCGATGATGCTACAATCAACTTTTAA ATGTGTGATTCAGAAAAAGGGTTGTTTACATCCGAAGCAATGTCCATACTGCCCAGTGTCAAATTTGCAGATTTAAGCCCCACAAAAGATGTTTTTGTTTCAGCCCTCCGCTTTGCTTTGTCAATTAACAGCCCATGTGCCCCATTTGGAGATGAGCTTCAAAAATCTGCTCAGGAACAAGTTGACTACATGTTAAGGGTAGATGCGGACACGTCGCTGGTAATAACCGACGATGAAGTAAAATCCGTGTTAAAAACGGGCCTTTTTAGAACTTGTGCATCATTTGAGATGGAGCTATCTTCCCTACTTTTGGAGTCTGACCTTGCATCTCAAGTCAACGAAGACAAAATATTGAGGACATTATCGGATCTTGAATGGATATGTACTTTACTTCCAAAGATGAACTTAATGAAAGACTTTGTTTCCAACTGGATTGAGATATCTGGGAACGTTCTGAAGATAATCGAGGACGAAAAGTTGAATTCCTTAATGTGGGGTTTGAAAGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACCGTGATTCTTCCTGCACCGTACCGGTTGTCGCTGCTTAAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTGGATTCGAAGTGCATCGGAGAGACAGATTTTCATTACAGGATGGACGAAGAACTGTGCATGAACATCGAGGGGGCAATTGTTTCTATGGTATTGGCATTGCCTTCAAATGATCAAGCAGGTATCTTGGCAGACTGGATGAAAGCTGAGGAAATACAATATCCTGATTTAACAGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCTCTGACAATGGCGATGATGCTACAATCAACTTTTAA ATGTGTGATTCAGAAAAAGGGTTGTTTACATCCGAAGCAATGTCCATACTGCCCAGTGTCAAATTTGCAGATTTAAGCCCCACAAAAGATGTTTTTGTTTCAGCCCTCCGCTTTGCTTTGTCAATTAACAGCCCATGTGCCCCATTTGGAGATGAGCTTCAAAAATCTGCTCAGGAACAAGTTGACTACATGTTAAGGGTAGATGCGGACACGTCGCTGGTAATAACCGACGATGAAGTAAAATCCGTGTTAAAAACGGGCCTTTTTAGAACTTGTGCATCATTTGAGATGGAGCTATCTTCCCTACTTTTGGAGTCTGACCTTGCATCTCAAGTCAACGAAGACAAAATATTGAGGACATTATCGGATCTTGAATGGATATGTACTTTACTTCCAAAGATGAACTTAATGAAAGACTTTGTTTCCAACTGGATTGAGATATCTGGGAACGTTCTGAAGATAATCGAGGACGAAAAGTTGAATTCCTTAATGTGGGGTTTGAAAGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACCGTGATTCTTCCTGCACCGTACCGGTTGTCGCTGCTTAAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTGGATTCGAAGTGCATCGGAGAGACAGATTTTCATTACAGGATGGACGAAGAACTGTGCATGAACATCGAGGGGGCAATTGTTTCTATGGTATTGGCATTGCCTTCAAATGATCAAGCAGGTATCTTGGCAGACTGGATGAAAGCTGAGGAAATACAATATCCTGATTTAACAGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCTCTGACAATGGCGATGATGCTACAATCAACTTTTAA MCDSEKGLFTSEAMSILPSVKFADLSPTKDVFVSALRFALSINSPCAPFGDELQKSAQEQVDYMLRVDADTSLVITDDEVKSVLKTGLFRTCASFEMELSSLLLESDLASQVNEDKILRTLSDLEWICTLLPKMNLMKDFVSNWIEISGNVLKIIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYRLSLLKFWLPYIRKMKPLLDSKCIGETDFHYRMDEELCMNIEGAIVSMVLALPSNDQAGILADWMKAEEIQYPDLTDAFELWCYRTKSAKRRLVEGIDGACSDNGDDATINF Homology
BLAST of Lsi09G001500 vs. ExPASy Swiss-Prot
Match: Q8RX01 (BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=At3g05675 PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.6e-52 Identity = 122/293 (41.64%), Postives = 181/293 (61.77%), Query Frame = 0
BLAST of Lsi09G001500 vs. ExPASy TrEMBL
Match: A0A0A0KMC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148650 PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150 Identity = 269/292 (92.12%), Postives = 277/292 (94.86%), Query Frame = 0
BLAST of Lsi09G001500 vs. ExPASy TrEMBL
Match: A0A1S3ATN5 (BTB/POZ domain-containing protein At3g05675 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482849 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 8.1e-150 Identity = 268/292 (91.78%), Postives = 280/292 (95.89%), Query Frame = 0
BLAST of Lsi09G001500 vs. ExPASy TrEMBL
Match: A0A5A7TMS3 (BTB/POZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001620 PE=4 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 1.1e-149 Identity = 267/292 (91.44%), Postives = 280/292 (95.89%), Query Frame = 0
BLAST of Lsi09G001500 vs. ExPASy TrEMBL
Match: A0A6J1EMX8 (BTB/POZ domain-containing protein At3g05675 OS=Cucurbita moschata OX=3662 GN=LOC111435816 PE=4 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 6.9e-149 Identity = 266/295 (90.17%), Postives = 282/295 (95.59%), Query Frame = 0
BLAST of Lsi09G001500 vs. ExPASy TrEMBL
Match: A0A6J1I2T6 (BTB/POZ domain-containing protein At3g05675 OS=Cucurbita maxima OX=3661 GN=LOC111469077 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 6.0e-145 Identity = 260/292 (89.04%), Postives = 275/292 (94.18%), Query Frame = 0
BLAST of Lsi09G001500 vs. NCBI nr
Match: XP_038875912.1 (BTB/POZ domain-containing protein At3g05675 [Benincasa hispida]) HSP 1 Score: 547.4 bits (1409), Expect = 8.1e-152 Identity = 274/292 (93.84%), Postives = 281/292 (96.23%), Query Frame = 0
BLAST of Lsi09G001500 vs. NCBI nr
Match: XP_011654681.1 (BTB/POZ domain-containing protein At3g05675 [Cucumis sativus] >KGN49994.1 hypothetical protein Csa_000492 [Cucumis sativus]) HSP 1 Score: 542.0 bits (1395), Expect = 3.4e-150 Identity = 269/292 (92.12%), Postives = 277/292 (94.86%), Query Frame = 0
BLAST of Lsi09G001500 vs. NCBI nr
Match: XP_008437433.1 (PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo] >XP_008437434.1 PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo]) HSP 1 Score: 539.7 bits (1389), Expect = 1.7e-149 Identity = 268/292 (91.78%), Postives = 280/292 (95.89%), Query Frame = 0
BLAST of Lsi09G001500 vs. NCBI nr
Match: KAA0042659.1 (BTB/POZ domain-containing protein [Cucumis melo var. makuwa] >TYK06061.1 BTB/POZ domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 539.3 bits (1388), Expect = 2.2e-149 Identity = 267/292 (91.44%), Postives = 280/292 (95.89%), Query Frame = 0
BLAST of Lsi09G001500 vs. NCBI nr
Match: XP_022929149.1 (BTB/POZ domain-containing protein At3g05675 [Cucurbita moschata]) HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148 Identity = 266/295 (90.17%), Postives = 282/295 (95.59%), Query Frame = 0
BLAST of Lsi09G001500 vs. TAIR 10
Match: AT4G10800.1 (BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT3G05675.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 255.4 bits (651), Expect = 5.9e-68 Identity = 135/271 (49.82%), Postives = 192/271 (70.85%), Query Frame = 0
BLAST of Lsi09G001500 vs. TAIR 10
Match: AT3G05675.2 (BTB/POZ domain-containing protein ) HSP 1 Score: 207.2 bits (526), Expect = 1.8e-53 Identity = 122/293 (41.64%), Postives = 181/293 (61.77%), Query Frame = 0
BLAST of Lsi09G001500 vs. TAIR 10
Match: AT3G05675.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 207.2 bits (526), Expect = 1.8e-53 Identity = 122/293 (41.64%), Postives = 181/293 (61.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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