Lsi09G000980 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G000980
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	PLAT domain-containing protein
Location	chr09: 856946 .. 858569 (+)
RNA-Seq Expression	Lsi09G000980
Synteny	Lsi09G000980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAATCAGAAGCGTTAATCTCTGTCCTAAACAGAGAGTGGCTAACCACCTTCGCGCCACGTCCAAATCACGTGATAATAATGTTATCCTCCCTTTCCCTTTCCCGGCCAACCGGAGCAATATATACCAACCATCGCCATCTCCTTCTGCCCTGAATCTCTAAACCATCACCGGAAAGTAAGAAGATGGCGTCTCGTTGTCTCTGTTACTCCATTATCTTCATCGCTCTCTTCTTCTCTGCAATGGCTGATAACCCTATCGTAAGTTTCTTCTCTTTTAACACATTTATTTGAAATTTGTTGTACATCATCATTGGATCTATCACTGAAGCTACGTGAGATCTTCATTCACTCTGATCTCTGTGTTTTTGTGTTTTGATTTGATTGATCGCCTTTAGCAATCGAGTTATGGCAACATTTCAGATTGATTTTGAGTTGTGATCAGTTACGGCAAGCGAACTGATTGTAGAAATGTAGTTTAGAAAATGCAGGATGATGATCCGATTTCTGCGTTGGTGATTTTGTCGATTATATGTGTAATAATGAATTGAATGATTGATTGACATTTCAGATCGATTAAGAGTTATGAGATGCTAACTAATTATAAAAATGTTATTTGGAAAATGAAGATAATGTTCCGATTTCTGCGTTGATGATACCCGATTATCGATTCTAAGTTGAATAGTGAACTGAATGAATGATTCACGTTTCAGATTGATTAGGAGTTAGGATAGGGAAACTAATTACAGAAATGCTGTTTCGAAAATGCAAAATCATGCTCCGATTTGATTATATGTGGAATATAACGAACTGAATATGAATGATTCGATGCAAGTTAAATTTAATTGATCTAAATCGCCGTAATTTCTGAACGGATTGTGTTCCGTGAAAAGTGATGAAAATATTTTTGTGCAGGACAAATGCGTGTACATATTCTACGTGAAGACAGGTTCGATAATGAAGGGGGGAACGGACTCCAAAATCAGCGTGACAATCGGCGATTCAAGGGGCGGATCGGTGGAGATTTCGGATCTAGCATCGTGGGGGCTGATGGAACAAGAGCACGACTATTTCGAACGGAACAACGTAGACATATTCAGCGGACGGGGCGCGTGCGTGGAAGCGCCGGTATGTCGACTGAACCTGACCTCTGACGGATCGGGCCCCCACCACGGGTGGTACTGCGACTATCTGGAGGTGACGTCGACGGGGCCGCATAGAGCATGCTCCCAGACGGCGTTTTACGTGGACCAGTGGCTGGCGACCGACGCGCCGCCGTTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGGTCAGTGGACATGGAGCGTCGAGGCATATGAATAACGGAAGGCTGGTGGTCTCCAGTTCCAAAAAATCTGCCTCCTTCTAGTGAAAATTTGATCGAAAGGGCGGTGAAGAAGGCTTGTGAGTTCTTTTTTTTTTTTTAATTAAAATTTTAGGGGTGGCTTTTAAGTGAGTTGTGGGAGTGATTTTGCTGCTTAATTATTAATTAAATAAGGAGCATTTTCTTATGTCATTTTTCGAATTTGGATGCGAGGTGTAAAATTTCGGGAAAATTGAAATAATCGGTTAATTTTAATTTTAAAACTATTTATC

mRNA sequence

GTCAATCAGAAGCGTTAATCTCTGTCCTAAACAGAGAGTGGCTAACCACCTTCGCGCCACGTCCAAATCACGTGATAATAATGTTATCCTCCCTTTCCCTTTCCCGGCCAACCGGAGCAATATATACCAACCATCGCCATCTCCTTCTGCCCTGAATCTCTAAACCATCACCGGAAAGTAAGAAGATGGCGTCTCGTTGTCTCTGTTACTCCATTATCTTCATCGCTCTCTTCTTCTCTGCAATGGCTGATAACCCTATCGACAAATGCGTGTACATATTCTACGTGAAGACAGGTTCGATAATGAAGGGGGGAACGGACTCCAAAATCAGCGTGACAATCGGCGATTCAAGGGGCGGATCGGTGGAGATTTCGGATCTAGCATCGTGGGGGCTGATGGAACAAGAGCACGACTATTTCGAACGGAACAACGTAGACATATTCAGCGGACGGGGCGCGTGCGTGGAAGCGCCGGTATGTCGACTGAACCTGACCTCTGACGGATCGGGCCCCCACCACGGGTGGTACTGCGACTATCTGGAGGTGACGTCGACGGGGCCGCATAGAGCATGCTCCCAGACGGCGTTTTACGTGGACCAGTGGCTGGCGACCGACGCGCCGCCGTTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGGTCAGTGGACATGGAGCGTCGAGGCATATGAATAACGGAAGGCTGGTGGTCTCCAGTTCCAAAAAATCTGCCTCCTTCTAGTGAAAATTTGATCGAAAGGGCGGTGAAGAAGGCTTGTGAGTTCTTTTTTTTTTTTTAATTAAAATTTTAGGGGTGGCTTTTAAGTGAGTTGTGGGAGTGATTTTGCTGCTTAATTATTAATTAAATAAGGAGCATTTTCTTATGTCATTTTTCGAATTTGGATGCGAGGTGTAAAATTTCGGGAAAATTGAAATAATCGGTTAATTTTAATTTTAAAACTATTTATC

Coding sequence (CDS)

ATGGCGTCTCGTTGTCTCTGTTACTCCATTATCTTCATCGCTCTCTTCTTCTCTGCAATGGCTGATAACCCTATCGACAAATGCGTGTACATATTCTACGTGAAGACAGGTTCGATAATGAAGGGGGGAACGGACTCCAAAATCAGCGTGACAATCGGCGATTCAAGGGGCGGATCGGTGGAGATTTCGGATCTAGCATCGTGGGGGCTGATGGAACAAGAGCACGACTATTTCGAACGGAACAACGTAGACATATTCAGCGGACGGGGCGCGTGCGTGGAAGCGCCGGTATGTCGACTGAACCTGACCTCTGACGGATCGGGCCCCCACCACGGGTGGTACTGCGACTATCTGGAGGTGACGTCGACGGGGCCGCATAGAGCATGCTCCCAGACGGCGTTTTACGTGGACCAGTGGCTGGCGACCGACGCGCCGCCGTTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGGTCAGTGGACATGGAGCGTCGAGGCATATGAATAACGGAAGGCTGGTGGTCTCCAGTTCCAAAAAATCTGCCTCCTTCTAG

Protein sequence

MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSVEISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEVTSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSKKSASF

Homology

[Close]

BLAST of Lsi09G000980 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39
Identity = 79/160 (49.38%), Postives = 106/160 (66.25%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMA---DNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRG 60
           MA R +    + +    SA+A   D+P   CVY FY++TGSI K GTDS IS  I D  G
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDP--DCVYTFYLRTGSIWKAGTDSIISARIYDKDG 60

Query: 61  GSVEISDLASW-GLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCD 120
             + I +L +W GLM  +++YFER N+DIFSGR  C+ +P+C LNLTSDGSG HHGWY +
Sbjct: 61  DYIGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVN 120

Query: 121 YLEVTSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGC 157
           Y+E+T+ G H  CS   F ++QWLATD  P++LT + + C
Sbjct: 121 YVEITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of Lsi09G000980 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37
Identity = 71/139 (51.08%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 19  AMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSVEISDLASW-GLMEQEHDY 78
           A+AD+  D CVY F+++TGS  K GTDS IS  + D  G  + I +L +W GLM   ++Y
Sbjct: 23  ALADDEAD-CVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNY 82

Query: 79  FERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEVTSTGPHRACSQTAFYVD 138
           +ER N+DIFSG+  C+ +PVC LNLTSDGSG HHGWY +Y+EVT+ G H  CS  +F V+
Sbjct: 83  YERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVE 142

Query: 139 QWLATDAPPFQLTTILDGC 157
           QWLA+D  P++L+ + + C
Sbjct: 143 QWLASDTSPYELSAVRNNC 160

[Close]

BLAST of Lsi09G000980 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.9e-31
Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 48  ISVTIGDSRGGSVEISDLASW-GLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDG 107
           +S+ + DS G    ISDL SW GLM   HDYFER N+DIFSG G+C+  PVC +NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGPHHGWYCDYLEVT-STGPHRACSQTAFYVDQWLATDAPPFQL 150
           SG HHGWYC+Y+EVT S    R+CSQ  F V+QWLA DA P++L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

[Close]

BLAST of Lsi09G000980 vs. ExPASy Swiss-Prot
Match: C8YR32 (Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.7e-04
Identity = 36/125 (28.80%), Postives = 56/125 (44.80%), Query Frame = 0


Query: 19   AMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSVEISDLASWGLMEQEHDYF 78
            AM  N   K +Y   V TG ++ GGTDS I +T+    G + E+        ++++   F
Sbjct: 1544 AMVVNIGKKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQ-------LDKKKARF 1603

Query: 79   ERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCD--YLEVTSTGPHRACSQTAFYV 138
            ER   D F      + AP  ++ +  DG G    W+ +   L+  +TG       T FY 
Sbjct: 1604 EREQNDTFIMEILDI-APFTKMRIRIDGMGSRPEWFLERILLKNMNTG-----DLTMFYY 1655

Query: 139  DQWLA 142
              WL+
Sbjct: 1664 GDWLS 1655

[Close]

BLAST of Lsi09G000980 vs. ExPASy TrEMBL
Match: A0A0A0KNI5 (PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141160 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.7e-86
Identity = 152/184 (82.61%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MAS  LC+SIIFIALFFS+MA N  +KCVY  YVKTGSI+KGGTDSKISVT+GDSRG SV
Sbjct: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
           EISDL SWGLM+Q HDYFER+N+DIFSGRG C+E+PVCRLNLTSDGSG HHGW+CDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TS GPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDW+SGHGASRHM++G+L+VSSSK
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHGASRHMHSGKLMVSSSK 180

Query: 181 KSAS 185
           KS +
Sbjct: 181 KSVA 184

[Close]

BLAST of Lsi09G000980 vs. ExPASy TrEMBL
Match: A0A1S3AUB5 (uncharacterized protein LOC103482902 OS=Cucumis melo OX=3656 GN=LOC103482902 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.9e-86
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MAS  LC+SIIFIALFFSAMAD   +KCVY  YVKTGSI+KGGTDSKISV +GDSRG SV
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
           EISDL SWGLM+Q HDYFER+N+DIFSGRG C+E+PVCRLNLTSDGSG HHGWYCDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TS GPHRACSQTAFYVDQWLATDAPPFQLTT LDGCDDW+SGHG SRHMN GRLVVS S+
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGCDDWLSGHGPSRHMNRGRLVVSGSR 180

Query: 181 KSAS 185
           KS +
Sbjct: 181 KSVA 184

[Close]

BLAST of Lsi09G000980 vs. ExPASy TrEMBL
Match: A0A5A7TGT6 (Lipoxygenase, LH2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001120 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.6e-86
Identity = 151/184 (82.07%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MAS  LC+SIIFIALFFSAMAD   +KCVY  YVKTGSI+KGGTDSKISV +GDSRG SV
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
           EISDL SWGLM+Q HDYFER+N+DIFSGRG C+E+PVCRLNLTSDGSG HHGWYCDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TS GPHRACSQTAFYVDQWLATDAPPFQLTT LDGCDDW+SGHG SRHMN G+LVVS S+
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGCDDWLSGHGPSRHMNRGKLVVSGSR 180

Query: 181 KSAS 185
           KS +
Sbjct: 181 KSVA 184

[Close]

BLAST of Lsi09G000980 vs. ExPASy TrEMBL
Match: A0A6J1DZ35 (PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC111025926 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.1e-84
Identity = 148/184 (80.43%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MA   LC+SI+FIALF SAMA +  DKCVY FYV+TGSI+KGGTDSKIS+T+GDS G SV
Sbjct: 1   MAPPSLCFSIVFIALFLSAMAGDSHDKCVYTFYVRTGSILKGGTDSKISITLGDSFGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
            ISDL SWGLM   HDYFER++VD+FSGRGAC++APVCRLNLTSDGSGPHHGWYCDY+EV
Sbjct: 61  SISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TSTGPHRACSQTAFYVDQWLATD PPFQLTTILDGC+DWV GHG S+HMN+ RLVVSSSK
Sbjct: 121 TSTGPHRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSK 180

Query: 181 KSAS 185
           K+AS
Sbjct: 181 KAAS 184

[Close]

BLAST of Lsi09G000980 vs. ExPASy TrEMBL
Match: A0A6J1H1X8 (PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459298 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.8e-83
Identity = 145/184 (78.80%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MA RCL +S+IFIALF SA+A N  +KCVY FYVKTGS++KGGTD+ ISVTI D+ G SV
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
           EI+DL SWGLME+ HDYFER+NVDIFSGRG C+EAP+CRLNLTSDGSG HHGW+CDYLEV
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TSTGPHR+CSQTAFYVDQWLATDAPPFQLTTILDGCDDW+ GHG SRH ++G+LVVS SK
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180

Query: 181 KSAS 185
            SAS
Sbjct: 181 GSAS 184

[Close]

BLAST of Lsi09G000980 vs. NCBI nr
Match: XP_004145970.2 (PLAT domain-containing protein 3 [Cucumis sativus] >KGN49942.1 hypothetical protein Csa_000620 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 3.6e-86
Identity = 152/184 (82.61%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MAS  LC+SIIFIALFFS+MA N  +KCVY  YVKTGSI+KGGTDSKISVT+GDSRG SV
Sbjct: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
           EISDL SWGLM+Q HDYFER+N+DIFSGRG C+E+PVCRLNLTSDGSG HHGW+CDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TS GPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDW+SGHGASRHM++G+L+VSSSK
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHGASRHMHSGKLMVSSSK 180

Query: 181 KSAS 185
           KS +
Sbjct: 181 KSVA 184

[Close]

BLAST of Lsi09G000980 vs. NCBI nr
Match: XP_008437507.1 (PREDICTED: uncharacterized protein LOC103482902 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 6.1e-86
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MAS  LC+SIIFIALFFSAMAD   +KCVY  YVKTGSI+KGGTDSKISV +GDSRG SV
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
           EISDL SWGLM+Q HDYFER+N+DIFSGRG C+E+PVCRLNLTSDGSG HHGWYCDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TS GPHRACSQTAFYVDQWLATDAPPFQLTT LDGCDDW+SGHG SRHMN GRLVVS S+
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGCDDWLSGHGPSRHMNRGRLVVSGSR 180

Query: 181 KSAS 185
           KS +
Sbjct: 181 KSVA 184

[Close]

BLAST of Lsi09G000980 vs. NCBI nr
Match: KAA0042612.1 (Lipoxygenase, LH2 [Cucumis melo var. makuwa] >TYK06014.1 Lipoxygenase, LH2 [Cucumis melo var. makuwa])

HSP 1 Score: 326.6 bits (836), Expect = 1.4e-85
Identity = 151/184 (82.07%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MAS  LC+SIIFIALFFSAMAD   +KCVY  YVKTGSI+KGGTDSKISV +GDSRG SV
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
           EISDL SWGLM+Q HDYFER+N+DIFSGRG C+E+PVCRLNLTSDGSG HHGWYCDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TS GPHRACSQTAFYVDQWLATDAPPFQLTT LDGCDDW+SGHG SRHMN G+LVVS S+
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGCDDWLSGHGPSRHMNRGKLVVSGSR 180

Query: 181 KSAS 185
           KS +
Sbjct: 181 KSVA 184

[Close]

BLAST of Lsi09G000980 vs. NCBI nr
Match: XP_022159540.1 (PLAT domain-containing protein 3-like [Momordica charantia] >XP_022159543.1 PLAT domain-containing protein 3-like [Momordica charantia])

HSP 1 Score: 320.1 bits (819), Expect = 1.3e-83
Identity = 148/184 (80.43%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MA   LC+SI+FIALF SAMA +  DKCVY FYV+TGSI+KGGTDSKIS+T+GDS G SV
Sbjct: 1   MAPPSLCFSIVFIALFLSAMAGDSHDKCVYTFYVRTGSILKGGTDSKISITLGDSFGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
            ISDL SWGLM   HDYFER++VD+FSGRGAC++APVCRLNLTSDGSGPHHGWYCDY+EV
Sbjct: 61  SISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TSTGPHRACSQTAFYVDQWLATD PPFQLTTILDGC+DWV GHG S+HMN+ RLVVSSSK
Sbjct: 121 TSTGPHRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSK 180

Query: 181 KSAS 185
           K+AS
Sbjct: 181 KAAS 184

[Close]

BLAST of Lsi09G000980 vs. NCBI nr
Match: XP_022957900.1 (PLAT domain-containing protein 3-like [Cucurbita moschata] >KAG6605634.1 PLAT domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035544.1 PLAT domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82
Identity = 145/184 (78.80%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSV 60
           MA RCL +S+IFIALF SA+A N  +KCVY FYVKTGS++KGGTD+ ISVTI D+ G SV
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60

Query: 61  EISDLASWGLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEV 120
           EI+DL SWGLME+ HDYFER+NVDIFSGRG C+EAP+CRLNLTSDGSG HHGW+CDYLEV
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWVSGHGASRHMNNGRLVVSSSK 180
           TSTGPHR+CSQTAFYVDQWLATDAPPFQLTTILDGCDDW+ GHG SRH ++G+LVVS SK
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180

Query: 181 KSAS 185
            SAS
Sbjct: 181 GSAS 184

[Close]

BLAST of Lsi09G000980 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.4e-40
Identity = 79/160 (49.38%), Postives = 106/160 (66.25%), Query Frame = 0


Query: 1   MASRCLCYSIIFIALFFSAMA---DNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRG 60
           MA R +    + +    SA+A   D+P   CVY FY++TGSI K GTDS IS  I D  G
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDP--DCVYTFYLRTGSIWKAGTDSIISARIYDKDG 60

Query: 61  GSVEISDLASW-GLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCD 120
             + I +L +W GLM  +++YFER N+DIFSGR  C+ +P+C LNLTSDGSG HHGWY +
Sbjct: 61  DYIGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVN 120

Query: 121 YLEVTSTGPHRACSQTAFYVDQWLATDAPPFQLTTILDGC 157
           Y+E+T+ G H  CS   F ++QWLATD  P++LT + + C
Sbjct: 121 YVEITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of Lsi09G000980 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 157.9 bits (398), Expect = 7.8e-39
Identity = 71/139 (51.08%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 19  AMADNPIDKCVYIFYVKTGSIMKGGTDSKISVTIGDSRGGSVEISDLASW-GLMEQEHDY 78
           A+AD+  D CVY F+++TGS  K GTDS IS  + D  G  + I +L +W GLM   ++Y
Sbjct: 23  ALADDEAD-CVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNY 82

Query: 79  FERNNVDIFSGRGACVEAPVCRLNLTSDGSGPHHGWYCDYLEVTSTGPHRACSQTAFYVD 138
           +ER N+DIFSG+  C+ +PVC LNLTSDGSG HHGWY +Y+EVT+ G H  CS  +F V+
Sbjct: 83  YERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVE 142

Query: 139 QWLATDAPPFQLTTILDGC 157
           QWLA+D  P++L+ + + C
Sbjct: 143 QWLASDTSPYELSAVRNNC 160

[Close]

BLAST of Lsi09G000980 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 134.8 bits (338), Expect = 7.0e-32
Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 48  ISVTIGDSRGGSVEISDLASW-GLMEQEHDYFERNNVDIFSGRGACVEAPVCRLNLTSDG 107
           +S+ + DS G    ISDL SW GLM   HDYFER N+DIFSG G+C+  PVC +NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGPHHGWYCDYLEVT-STGPHRACSQTAFYVDQWLATDAPPFQL 150
           SG HHGWYC+Y+EVT S    R+CSQ  F V+QWLA DA P++L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

The following BLAST results are available for this feature:

BLAST of Lsi09G000980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65660	3.4e-39	49.38	PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 S...	[more]
Q9SIE7	1.1e-37	51.08	PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 S...	[more]
Q2V2V3	9.9e-31	60.58	PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 S...	[more]
C8YR32	2.7e-04	28.80	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lo...	[more]

BLAST of Lsi09G000980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNI5	1.7e-86	82.61	PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141160 PE=4 S...	[more]
A0A1S3AUB5	2.9e-86	82.61	uncharacterized protein LOC103482902 OS=Cucumis melo OX=3656 GN=LOC103482902 PE=...	[more]
A0A5A7TGT6	6.6e-86	82.07	Lipoxygenase, LH2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00...	[more]
A0A6J1DZ35	6.1e-84	80.43	PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A6J1H1X8	6.8e-83	78.80	PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459...	[more]

BLAST of Lsi09G000980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145970.2	3.6e-86	82.61	PLAT domain-containing protein 3 [Cucumis sativus] >KGN49942.1 hypothetical prot...	[more]
XP_008437507.1	6.1e-86	82.61	PREDICTED: uncharacterized protein LOC103482902 [Cucumis melo]	[more]
KAA0042612.1	1.4e-85	82.07	Lipoxygenase, LH2 [Cucumis melo var. makuwa] >TYK06014.1 Lipoxygenase, LH2 [Cucu...	[more]
XP_022159540.1	1.3e-83	80.43	PLAT domain-containing protein 3-like [Momordica charantia] >XP_022159543.1 PLAT...	[more]
XP_022957900.1	1.4e-82	78.80	PLAT domain-containing protein 3-like [Cucurbita moschata] >KAG6605634.1 PLAT do...	[more]

BLAST of Lsi09G000980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39730.1	2.4e-40	49.38	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	7.8e-39	51.08	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	7.0e-32	60.58	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 17..145 e-value: 2.0E-18 score: 68.3
None	No IPR available	PANTHER	PTHR31718:SF47	PLAT DOMAIN-CONTAINING PROTEIN 3-LIKE	coord: 10..184
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 10..184
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 30..144 e-value: 3.8E-10 score: 40.3
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 28..154 score: 19.441536
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 29..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G000980.1	Lsi09G000980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding