Lsi09G000690 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G000690
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr09: 589207 .. 590409 (+)
RNA-Seq ExpressionLsi09G000690
SyntenyLsi09G000690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAATGAATGAATTCTTAGGCCAATGTTCAAACCGTTTACCTCGTATCATTGAAAAAATTTAATTACGATGTTTTCGAGTACAAGGGGATGGGAATGCATAATGTATTATGAAAATGTGGAGCAGATAGTCAGATTTGTTTGATATGTTTTGGACCATGGGGAACATACCATAGGATTTGTACATCATTTATGTGTAATTTTTATGCATTCAATCTATAAAGGTTGTAGAGTTTGTATCATAAATTACTTGAACTGCTTAGAGATATTCTTTATTATTTGACAGATACTATATATGGTTGAACTTAAAGCAGAATTGTTCTTAGGTCCAAGATTTTGATTTTTTTTTTAAAGAACATAAATGAGCGATTGATCAAATTCCCTAAAGAATAGATTAACTTGTATTAGGCTAGAGCTTTTGAATATTAAGAACATGTTTAGCCCAAAAAATAAAAAGTGATGAAGTAAAGACTCCACTCCTTGATTGGTCCCAGACGTTCTTGAACCGATTGTGGATCTCACAATTAAATAACATCAATATCATGATTTAATAACTTCTTACACCGGAGCTAACTATCCAAACATTTTCACGCCTCCTAAATATCCATCTCATCTTTTTTCAAAGAGAATAAAAAGGACATTGATTCCATATGAAGCATTTCAATAGAATTTTACAACTGATAACCTAATACCTTGGCTTTTATAAAGAAATATTTCATAAATGTGAGAAATTTTGATAGCAGATATCGAAGTTACTTCAGTCAGCATACCAATCTAAATGTCAATCACATTATACCCATTTAAGTGAAGATGAATTGATTTATAATTGGTATCTAGGACAAAACTTTAATGCACAAGCATTTCAATAAAGTTGCACTCTTCCTCGAATAACAAGTATGCAAAAATCATAAGAGATCAAAACCTTTCTGCCAATCTGGCTGTAACTGCTCTTAGTTTTGAATAAACTTTTCCAGCTGGAGAACCTAAAATGAGGCTGCAAAGAGAATCTCTAGCAATCTTGATGTTGGCGAAGGATCCTAATATGTGGATCTTGGTGTCTGCAATAACTATCCTTGTCTTTGTAGCATTTTCAATGGCGAACTTCGTTTTACCAGCTTTACCAGACAATCTGCCTATAGCACGGGACAAATGCTCGCCTCGAAGCGTCTTAACATCTTTGATCTCAAAGGATTCTACATAG

mRNA sequence

ATGGCTGGAGAACCTAAAATGAGGCTGCAAAGAGAATCTCTAGCAATCTTGATGTTGGCGAAGGATCCTAATATGTGGATCTTGGTGTCTGCAATAACTATCCTTGTCTTTGTAGCATTTTCAATGGCGAACTTCGTTTTACCAGCTTTACCAGACAATCTGCCTATAGCACGGGACAAATGCTCGCCTCGAAGCGTCTTAACATCTTTGATCTCAAAGGATTCTACATAG

Coding sequence (CDS)

ATGGCTGGAGAACCTAAAATGAGGCTGCAAAGAGAATCTCTAGCAATCTTGATGTTGGCGAAGGATCCTAATATGTGGATCTTGGTGTCTGCAATAACTATCCTTGTCTTTGTAGCATTTTCAATGGCGAACTTCGTTTTACCAGCTTTACCAGACAATCTGCCTATAGCACGGGACAAATGCTCGCCTCGAAGCGTCTTAACATCTTTGATCTCAAAGGATTCTACATAG

Protein sequence

MAGEPKMRLQRESLAILMLAKDPNMWILVSAITILVFVAFSMANFVLPALPDNLPIARDKCSPRSVLTSLISKDST
Homology
[Close]
BLAST of Lsi09G000690 vs. NCBI nr
Match: KAG6545705.1 (hypothetical protein Mapa_012890 [Marchantia paleacea])

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 42 MANFVLPALPDNLPIARDKCSPRSVLTSLISKDST 77
          MAN V P  PD+ PIARD+CSPR VLTSLISKDST
Sbjct: 1  MANLVFPPFPDSRPIARDRCSPRRVLTSLISKDST 35

The following BLAST results are available for this feature:
BLAST of Lsi09G000690 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi09G000690 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi09G000690 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6545705.11.1e-0477.14hypothetical protein Mapa_012890 [Marchantia paleacea][more]
BLAST of Lsi09G000690 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G000690.1Lsi09G000690.1mRNA