Lsi09G000390 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACAAATTGTCTTACAAAAGGATTTGAGTTTTGCAAGAAGTTAGCTCTTTCTTCGCCTTCCTTTGTCTTTGTCTTGTTCTCAAGACAAGACCCAAAAAGAAATATCATGGGATCTCTCTATACCATTCGCATGGTTGTTGGAGTCATTGGTATTTTTTAATTTTTAATTTTTCGATTTTCATGTTCAAATTATTAATATGAAGAATTTTAAAAAATGGGTTTTTTTTTTTTTCTCTCTAAAAGCACTTTTTTTTCCCCTGTTTTTTGTGTCTTTCTATGCAGGAAATGGTGCTTCTTTGCTGCTTTATGCTGTTCCCATGTAATAAAATTTGCCAACTTTTTGCTTTGTTATGAATTTATCATCTATCAAAGTTTTGAGGTTCTTTGGAAATTAAATTGTGTTCTAAAATGTTTTTATTTATTTATTTTTATTTTTTGGCTGTAAGCTTCAAACTATTTTAGAGATTGTTTTCATTAATTTTACCTAAATTGTTTAACAAAATCTTGAAGTAAAAAATATTTTATTCGTTTAGAGTAGATGTCTACTCACACAAATATTTGAAGTCTTTGCTCACGTTTAATATCATATGGTTATCAAACCATTCATGTTTTTTTTAATGATCAATAAAAATTTTACATAAAATTCGTTTAGGAATTAAAATAACAAATTTAAAAGTTTAAGAGTAAAAGTGAAGGTAAAAAATGAGTGATTATTTCTTTTTTAAATATATATATATATATATATATATATATATATATATATATATATATAATTTGTTGAACAGTCATTTTGACGTACACAATAACGTTATCGCTTTTACAAGTCATTCCTTCCCTCACAATTTTGGAAACAAAAACAGATAGAATTTTCAAAAATAAATTTTTTAGGGTTTTTTTTATAAAAAAAAAAAAAGATTATTGAAATTATTTTGTTTATATGGCAGATTGACATTTTGGAGGGTTATAAAGAAGAAGAGCACAGAAGAATTTTCATGTGTTCCATACATTGTTGCCCTAATGAATTGTCTTCTTTACACTTGGTATGGTTTACCAATTGTAAGCAAAGGATGGGAAAATTTCCCTGTTGTCACCATTAATGGCCTTGGAATTCTTCTTGAGTTTTTCTTCATTTTCATCTACTTATGCTTTGCTTCATCTCAAGGAAAGGTAAGTTTTTCCCAACTATATAACTCGGTTTCTACGATCCCGTTTGATAAATATTTTGTGTTTTATATTTTACAGTTTGCTCATAAAGTTTTTTGTTTAATTTGTTTTGTAATTTATGTATATGGCGAAGTAAATATTTTAGTGCCTATATTAGTCCTTCATATATTTTAATAATTTTCAATTTAGTCACTCATTGCTGGTAAATGTTTAAAATTACTCGTTAATCCTGAACTAATTAAGGGTGAAAATTTACCAAGGAAGAAAATTTAGTTGACTTAAGATAGGAAATTAAAGTCTTTATTGTACAAAGTTTCTATTGAATTTGGTAAAGATACCAAAAGTCTTACTTTAGATTACCTTTTCTCTTTATCTTCTTTAATTTTTCATATCATGTTAAGTTAGTTTATCATGGTCAATTTTAACAAATATTTTAATATGCAAATATTTAGTTTTTTTTTTCCCTTAATTAAATGTGGAAGATTCAAGCCTTTTGATTGGTTCGTTGCCCCAATAACTATAAGTCGTTGTCGACTAAGATTCTATTTGTAGGATTCGTCGCTTTTTCACGTTTCTATCATATCTTGTCAAATCACTATCGAATTCAAAACTTTTCATATGTTTTAAATACCTAACTTAAATGGAATAATAAATATCTTGTTAGATCACCAATCAACTGAAAAAATTGTTAGGTTTAAATAAGCTTTGATTCATTTTAGTTTTTATATTTTCAACTTTTGTTGGTTTTGGTTAATTAATATGTGCAGAAGAAAGTGGTTTTGAGATTGGTGGGAGTTGTTACAATATTCTGTTGTGTGGGAATGATCTCTGCTTTTGTTCTAAAAACTCATCATCTTCGGAAGCTTTTTGTGGGATGCATTGGCCTTGTTGCTTCCATTGCTATGTATGCCTCTCCATTGGTAGCCATGGTAAGCTCAAAAAATCAACCCACCAAAATTTAATTACGGTTTCTTTGGTAACCGCGTTCTCGTTTATTTTGTTTCTTTCTTTCCTCTTTAATTTTTCATTATATAGAGAGACAAACGATATCACGTCAATAGTTATTTCTTGTTTTTTTTTTTTTTTTGTTCTTGTATAACATAGATGTGTTTGGTAATAGTTTCTTGTTCTTTAAAAGTTTATATTTAAATTTAAAAAAAAATTAAAAAGTTTAATGTTATATTTATGGGTTGTTTTCAAATATAGAAAAATGAACCAAACTATTTACAAATGTAGAAAAGTTTTATTGTCTATCAGCGATAGACCATAATAGAATTTTATCGCTTCAGTAATAGACAGTGTCTATCACAGTCTATTGCTGATAGAACAGTGAAATTTTTCTATATTTGTAAATAGTTTGATATTCTTTCTGTTTATAGTAATTTTCTTATATTTTTATTGTGAATTTTATAAATCTAGAATGATATTAGGGAAATTACTATAAACAGAAAAAATATCAAACTATTTACAAATATAGAAAAATTTCACTGTTTATCAGTGATAGACCGCGATAGAATTCTATCATTGTCTAGTACTGAAGCGATAAAATTCTATCATGGTCTATCACTAATATACTGTAAAAATTTTCTATATTTGTAAATAGTTTGACTTATGTTTTTATATTGGAAAAGAACCCTTGATACTATAACATTTGGAAATTAATTTTGGACCCTCTTTGTGTCTCATGCAGAAGCAAGTGATAAAGACAAAGAGTGTTGAATTTATGCCATTTTATTTGTCATTCTTTTCATTCTCTGCAAGTTCCTTGTGGTTGGCTTATGGACTCCTTAGCCATGATCTCTTCCTTGCGGTTTGTATTTACTAACACTCGTTCGATAATAGTTTGATTTTTTATTTTTGAAAATTTAGTTTATAAACTCTACTGTCATGTACGATTTTTTTTAGATTTGTTATTCACTCAATACCAATGTTTTTTAAAATTAAGCCAAGTAATTTTCAAAACTTAAAAAAAAATGTGAAAGTTATAGTAAGAAAATAAAAAAAAAAATAAAAGAAAAGCAAATTCCCAAATTAACATGTGAAAGTTTGAATGAATTTATTTGCAGTCTCCAAATCTAGTGGGAAGCCCATTGGGATTGCTTCAACTTGCGCTGTATTGCATCTATAGGAACAAAGAACATGAACAAGAAGTTTTGAAGGAGGAAAATGGAGGTGTTGTTATAGAGACTCTGCCCAATTGGGACTTGGAAAAGAATAATAATAATCAAGATCATATTCCACACCAAAATACCTCCTAAACAATTTAATCTATCCCTCTCTAAATTGAGGGAATCCTCGGTGAGCCAAAGGTACTTCAAGTGACCTAAAATTTAAAGATGCTCGTTATGATCGAGTTTAAATATCATTTTGGTCATTGAACTTTATGTGTAATATTGTGTACGGCAATGAAAAAGTTATTAGTGGTTGTGATTGAAGTGTCGAGACAAAATTTACCCAGTCAACTGAATTGTCTAAGTTTCATTAATATCCATGAGCTTTTAAAAGTTTCATTTCTTTTAAGTTTATTTCAAAATAACCTTTCCATCAAAATGAAGATGGAAAATGATGTGGCAACGACCAATATAAAATAGCGATACATGTGGCATAAGTGATAGATTTCATTTATACCCCTAAGTTTGAGGATTTGTTTCAATTAT AACAAATTGTCTTACAAAAGGATTTGAGTTTTGCAAGAAGTTAGCTCTTTCTTCGCCTTCCTTTGTCTTTGTCTTGTTCTCAAGACAAGACCCAAAAAGAAATATCATGGGATCTCTCTATACCATTCGCATGGTTGTTGGAGTCATTGGAAATGGTGCTTCTTTGCTGCTTTATGCTGTTCCCATATTGACATTTTGGAGGGTTATAAAGAAGAAGAGCACAGAAGAATTTTCATGTGTTCCATACATTGTTGCCCTAATGAATTGTCTTCTTTACACTTGGTATGGTTTACCAATTGTAAGCAAAGGATGGGAAAATTTCCCTGTTGTCACCATTAATGGCCTTGGAATTCTTCTTGAGTTTTTCTTCATTTTCATCTACTTATGCTTTGCTTCATCTCAAGGAAAGAAGAAAGTGGTTTTGAGATTGGTGGGAGTTGTTACAATATTCTGTTGTGTGGGAATGATCTCTGCTTTTGTTCTAAAAACTCATCATCTTCGGAAGCTTTTTGTGGGATGCATTGGCCTTGTTGCTTCCATTGCTATGTATGCCTCTCCATTGGTAGCCATGTCTCCAAATCTAGTGGGAAGCCCATTGGGATTGCTTCAACTTGCGCTGTATTGCATCTATAGGAACAAAGAACATGAACAAGAAGTTTTGAAGGAGGAAAATGGAGGTGTTGTTATAGAGACTCTGCCCAATTGGGACTTGGAAAAGAATAATAATAATCAAGATCATATTCCACACCAAAATACCTCCTAAACAATTTAATCTATCCCTCTCTAAATTGAGGGAATCCTCGGTGAGCCAAAGGTACTTCAAGTGACCTAAAATTTAAAGATGCTCGTTATGATCGAGTTTAAATATCATTTTGGTCATTGAACTTTATGTGTAATATTGTGTACGGCAATGAAAAAGTTATTAGTGGTTGTGATTGAAGTGTCGAGACAAAATTTACCCAGTCAACTGAATTGTCTAAGTTTCATTAATATCCATGAGCTTTTAAAAGTTTCATTTCTTTTAAGTTTATTTCAAAATAACCTTTCCATCAAAATGAAGATGGAAAATGATGTGGCAACGACCAATATAAAATAGCGATACATGTGGCATAAGTGATAGATTTCATTTATACCCCTAAGTTTGAGGATTTGTTTCAATTAT ATGGGATCTCTCTATACCATTCGCATGGTTGTTGGAGTCATTGGAAATGGTGCTTCTTTGCTGCTTTATGCTGTTCCCATATTGACATTTTGGAGGGTTATAAAGAAGAAGAGCACAGAAGAATTTTCATGTGTTCCATACATTGTTGCCCTAATGAATTGTCTTCTTTACACTTGGTATGGTTTACCAATTGTAAGCAAAGGATGGGAAAATTTCCCTGTTGTCACCATTAATGGCCTTGGAATTCTTCTTGAGTTTTTCTTCATTTTCATCTACTTATGCTTTGCTTCATCTCAAGGAAAGAAGAAAGTGGTTTTGAGATTGGTGGGAGTTGTTACAATATTCTGTTGTGTGGGAATGATCTCTGCTTTTGTTCTAAAAACTCATCATCTTCGGAAGCTTTTTGTGGGATGCATTGGCCTTGTTGCTTCCATTGCTATGTATGCCTCTCCATTGGTAGCCATGTCTCCAAATCTAGTGGGAAGCCCATTGGGATTGCTTCAACTTGCGCTGTATTGCATCTATAGGAACAAAGAACATGAACAAGAAGTTTTGAAGGAGGAAAATGGAGGTGTTGTTATAGAGACTCTGCCCAATTGGGACTTGGAAAAGAATAATAATAATCAAGATCATATTCCACACCAAAATACCTCCTAA MGSLYTIRMVVGVIGNGASLLLYAVPILTFWRVIKKKSTEEFSCVPYIVALMNCLLYTWYGLPIVSKGWENFPVVTINGLGILLEFFFIFIYLCFASSQGKKKVVLRLVGVVTIFCCVGMISAFVLKTHHLRKLFVGCIGLVASIAMYASPLVAMSPNLVGSPLGLLQLALYCIYRNKEHEQEVLKEENGGVVIETLPNWDLEKNNNNQDHIPHQNTS Homology
BLAST of Lsi09G000390 vs. ExPASy Swiss-Prot
Match: Q5NAZ9 (Bidirectional sugar transporter SWEET3b OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET3B PE=3 SV=2) HSP 1 Score: 210.3 bits (534), Expect = 2.2e-53 Identity = 119/234 (50.85%), Postives = 143/234 (61.11%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy Swiss-Prot
Match: Q6NQN5 (Bidirectional sugar transporter SWEET3 OS=Arabidopsis thaliana OX=3702 GN=SWEET3 PE=1 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48 Identity = 108/213 (50.70%), Postives = 130/213 (61.03%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy Swiss-Prot
Match: Q0DJY3 (Bidirectional sugar transporter SWEET3a OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET3A PE=3 SV=2) HSP 1 Score: 181.4 bits (459), Expect = 1.1e-44 Identity = 101/242 (41.74%), Postives = 141/242 (58.26%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy Swiss-Prot
Match: Q8RZQ8 (Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET1A PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.9e-28 Identity = 84/210 (40.00%), Postives = 107/210 (50.95%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy Swiss-Prot
Match: B8AYH1 (Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica OX=39946 GN=SWEET1B PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.5e-27 Identity = 81/213 (38.03%), Postives = 106/213 (49.77%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy TrEMBL
Match: A0A0A0KNA4 (Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_5G139600 PE=3 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 9.7e-97 Identity = 191/258 (74.03%), Postives = 201/258 (77.91%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy TrEMBL
Match: A0A6J1I683 (Bidirectional sugar transporter SWEET OS=Cucurbita maxima OX=3661 GN=LOC111471487 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 7.5e-89 Identity = 181/258 (70.16%), Postives = 194/258 (75.19%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy TrEMBL
Match: A0A6J1E3F0 (Bidirectional sugar transporter SWEET OS=Cucurbita moschata OX=3662 GN=LOC111430243 PE=3 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88 Identity = 179/258 (69.38%), Postives = 195/258 (75.58%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy TrEMBL
Match: A0A1S3AUD4 (Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103483082 PE=3 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84 Identity = 168/232 (72.41%), Postives = 178/232 (76.72%), Query Frame = 0
BLAST of Lsi09G000390 vs. ExPASy TrEMBL
Match: A0A6J1H294 (Bidirectional sugar transporter SWEET OS=Cucurbita moschata OX=3662 GN=LOC111459719 PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.4e-81 Identity = 167/258 (64.73%), Postives = 184/258 (71.32%), Query Frame = 0
BLAST of Lsi09G000390 vs. NCBI nr
Match: XP_038874562.1 (bidirectional sugar transporter SWEET3b isoform X1 [Benincasa hispida]) HSP 1 Score: 370.9 bits (951), Expect = 7.4e-99 Identity = 200/258 (77.52%), Postives = 204/258 (79.07%), Query Frame = 0
BLAST of Lsi09G000390 vs. NCBI nr
Match: XP_011654626.1 (bidirectional sugar transporter SWEET3b [Cucumis sativus] >KGN49882.1 hypothetical protein Csa_000598 [Cucumis sativus]) HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96 Identity = 191/258 (74.03%), Postives = 201/258 (77.91%), Query Frame = 0
BLAST of Lsi09G000390 vs. NCBI nr
Match: XP_022972962.1 (bidirectional sugar transporter SWEET3b-like [Cucurbita maxima]) HSP 1 Score: 336.7 bits (862), Expect = 1.5e-88 Identity = 181/258 (70.16%), Postives = 194/258 (75.19%), Query Frame = 0
BLAST of Lsi09G000390 vs. NCBI nr
Match: XP_022922176.1 (bidirectional sugar transporter SWEET3b-like [Cucurbita moschata]) HSP 1 Score: 335.9 bits (860), Expect = 2.6e-88 Identity = 179/258 (69.38%), Postives = 195/258 (75.58%), Query Frame = 0
BLAST of Lsi09G000390 vs. NCBI nr
Match: XP_023550598.1 (bidirectional sugar transporter SWEET3b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.3 bits (856), Expect = 7.7e-88 Identity = 182/259 (70.27%), Postives = 196/259 (75.68%), Query Frame = 0
BLAST of Lsi09G000390 vs. TAIR 10
Match: AT5G53190.1 (Nodulin MtN3 family protein ) HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49 Identity = 108/213 (50.70%), Postives = 130/213 (61.03%), Query Frame = 0
BLAST of Lsi09G000390 vs. TAIR 10
Match: AT1G21460.1 (Nodulin MtN3 family protein ) HSP 1 Score: 119.8 bits (299), Expect = 2.8e-27 Identity = 80/213 (37.56%), Postives = 106/213 (49.77%), Query Frame = 0
BLAST of Lsi09G000390 vs. TAIR 10
Match: AT5G40260.1 (Nodulin MtN3 family protein ) HSP 1 Score: 118.2 bits (295), Expect = 8.0e-27 Identity = 63/151 (41.72%), Postives = 98/151 (64.90%), Query Frame = 0
BLAST of Lsi09G000390 vs. TAIR 10
Match: AT5G40260.2 (Nodulin MtN3 family protein ) HSP 1 Score: 118.2 bits (295), Expect = 8.0e-27 Identity = 63/151 (41.72%), Postives = 98/151 (64.90%), Query Frame = 0
BLAST of Lsi09G000390 vs. TAIR 10
Match: AT4G10850.1 (Nodulin MtN3 family protein ) HSP 1 Score: 105.1 bits (261), Expect = 7.0e-23 Identity = 59/155 (38.06%), Postives = 93/155 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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