Lsi08G016220 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G016220
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RING-type domain-containing protein
Location	chr08: 24161059 .. 24163454 (-)
RNA-Seq Expression	Lsi08G016220
Synteny	Lsi08G016220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGATGGCTTTTCATTATCTTTTGAACAAGAGAAAAGAAACCAACCGCTGAAAGTTGTTGATTGTAGTGGTGGAAGGATTAAGCAACAAAAAATTTGAAATTTTTTACAGATAAATTAGGAAAAGAAGAAGAAAGCATCTTCCCACTCTCAGACGGCGTTGCCCCTTCCTTATCGGTAATCGCCGGAGGCATAAAACGCCCTTTCTTTTTAGTTGTACAATGCTTTTTCCCCAATCACAAAAGAGTCGCTACCAAAAAGCGCTTTGATTAAAGGAAGCCCCAAAATAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGAAAGCTGAAGAACCCATTCTTTGTAGGTTGCTTTCTTTGGTCCTTTTGGTGAAAACAACTTCGTGGGGGATTCAAAGAAACTCGAACCACCAAATTTCTCTTCTGGGTTTCCTTTTGTAAGCACGTTCTGGAAGAAAAGAATTTTGTGGGTATTATATTTTGGGGTTTCCGATTGAAAAAAGAGACAGACAATTTGTTGGAATTATGTATTATCAGCTAGCGAGGTCTTCTTGCAAGGATTCTCTGAAGGTCCTGGAAGAAGATGTACAGCGCGCCAATGCTTTGTAAGTATCCCTTTCCCCTTCATTATTTATCTTCTCTGTTCATAGAAAATTTGATATGTTTACTGGTTTTTTTGGTGCATTTAGGTTTATGAATATGGTTGATTTTGATGAGCTGTGGGTGGAGATGTTTATTTGATCTGTTTGTTTGTCTGATTTTCCCAATTTTGGGTTCTGGGTTTGCAGGGCTGCTACAATTCCAAGAGCCAAACATGGTTCCTATCTCCAAATGAAGTTGGTTTACAATCAATTGGCTCCTTTCTTTCTGTTTTTGATGCAATGGCTGGATTGTTCATGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGCTGGTCTCTCTTTTCTTGACTTGTTTAATGTTGGGTGATTTCTTGGATATGTGGCTTTGTTTTTCTGTTTATATGTCTGAGTTTTTATTCTGTCATTTGCTTTGTTTAGGTTTACACTGATGGAAGACTTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAGGATTTTTATGGTACATTTTTGGCTACCAAGAGTCTGTTTTGTAGTCTGTTTTGTCAAATGAGTTCTCTAATGGCATATGCAAAAGCTGTTGTGGTTTTAGTGCAGTTAAAACTTAAAACTCCGTACATATATCCATGATTATAGGAAGAACATGAGTTGTGCTATAAACACAACTGACAACAATAGGGAGTTGAATTTATGATATGGTTATTTGAAGAAGTTTTCACTGAAACTTTGTTCTGAAAACAGATTTTTTTTGAATTCCAACTTATTCCTATGCCTCTTGTTTGAAATCATTACCCTTTTGGTCTGTTGTGGTATTTGTTAAAGTATAGATATAATTAAATTTTCGGTTATTCATTTAACTTAATAGTATCAGAGCTGGAGGTTCTATGTTCAAACTTCTTAAATGTCATTTACTTCCCAATTAATATTGATTTTCACTTGATAGAACATTTTACCACACGTGAGGGGAGTGTTAAAATATAGATATAATTAAATTTATTGTATCTCATCCATTTAAGTTTTTTTGTTGATCAATAATTTAATAGTATTGTGTATTGCATGATTTGAGCTTATGAGCTTGTTTTATTTGCAACATCTTCCTACTTTAGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCTGAGGAGTTCGACAATGCTAAAGAGAAGCGTGTCAAGTCCGGTAATTCTAGTGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATTGTGATTTGGAAAGAGAAGATGAGTGTGGGATTTGCTTAGAACCTTCAACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGTAACTAGCAAACCTTCTTAGATCATCTCTTTCTCCTTTATGAATTCGATTGCTCCAATGTCTTTGCTTGTGAATGATTTGTAGGAACACGAGATCGGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAAGACTTGTGGGTGCTAACTTGCAATGAAGATGTGGTTGATGCTGAAAAGGTTTCAAAGGAAGATCTTTCACGGTTCTATCTCTATATAAGCAGTCTACCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGAAGCAAAATATGCCTATTTCTGTACAGATGACTTGAAAGCCGACCGTCAAATGTAAACAGAGTTCGGTGAGAAAAACCTACTTCTTCTATGAAAAATGAATGCTCCATCCTTTTTCACATCCCAAA

mRNA sequence

AAAATGATGGCTTTTCATTATCTTTTGAACAAGAGAAAAGAAACCAACCGCTGAAAGTTGTTGATTGTAGTGGTGGAAGGATTAAGCAACAAAAAATTTGAAATTTTTTACAGATAAATTAGGAAAAGAAGAAGAAAGCATCTTCCCACTCTCAGACGGCGTTGCCCCTTCCTTATCGGTAATCGCCGGAGGCATAAAACGCCCTTTCTTTTTAGTTGTACAATGCTTTTTCCCCAATCACAAAAGAGTCGCTACCAAAAAGCGCTTTGATTAAAGGAAGCCCCAAAATAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATGAAAGCTGAAGAACCCATTCTTTGTAGGTTGCTTTCTTTGGTCCTTTTGGTGAAAACAACTTCGTGGGGGATTCAAAGAAACTCGAACCACCAAATTTCTCTTCTGGGTTTCCTTTTGTAAGCACGTTCTGGAAGAAAAGAATTTTGTGGGTATTATATTTTGGGGTTTCCGATTGAAAAAAGAGACAGACAATTTGTTGGAATTATGTATTATCAGCTAGCGAGGTCTTCTTGCAAGGATTCTCTGAAGGTCCTGGAAGAAGATGTACAGCGCGCCAATGCTTTGGCTGCTACAATTCCAAGAGCCAAACATGGTTCCTATCTCCAAATGAAGTTGGTTTACAATCAATTGGCTCCTTTCTTTCTGTTTTTGATGCAATGGCTGGATTGTTCATGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGCTGGTCTCTCTTTTCTTGACTTGTTTAATGTTTACACTGATGGAAGACTTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAGGATTTTTATGGTACATTTTTGGCTACCAAGACTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCTGAGGAGTTCGACAATGCTAAAGAGAAGCGTGTCAAGTCCGGTAATTCTAGTGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATTGTGATTTGGAAAGAGAAGATGAGTGTGGGATTTGCTTAGAACCTTCAACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCGGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAAGACTTGTGGGTGCTAACTTGCAATGAAGATGTGGTTGATGCTGAAAAGGTTTCAAAGGAAGATCTTTCACGGTTCTATCTCTATATAAGCAGTCTACCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGAAGCAAAATATGCCTATTTCTGTACAGATGACTTGAAAGCCGACCGTCAAATGTAAACAGAGTTCGGTGAGAAAAACCTACTTCTTCTATGAAAAATGAATGCTCCATCCTTTTTCACATCCCAAA

Coding sequence (CDS)

ATGTATTATCAGCTAGCGAGGTCTTCTTGCAAGGATTCTCTGAAGGTCCTGGAAGAAGATGTACAGCGCGCCAATGCTTTGGCTGCTACAATTCCAAGAGCCAAACATGGTTCCTATCTCCAAATGAAGTTGGTTTACAATCAATTGGCTCCTTTCTTTCTGTTTTTGATGCAATGGCTGGATTGTTCATGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGCTGGTCTCTCTTTTCTTGACTTGTTTAATGTTTACACTGATGGAAGACTTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAGGATTTTTATGGTACATTTTTGGCTACCAAGACTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCTGAGGAGTTCGACAATGCTAAAGAGAAGCGTGTCAAGTCCGGTAATTCTAGTGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATTGTGATTTGGAAAGAGAAGATGAGTGTGGGATTTGCTTAGAACCTTCAACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCGGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAAGACTTGTGGGTGCTAACTTGCAATGAAGATGTGGTTGATGCTGAAAAGGTTTCAAAGGAAGATCTTTCACGGTTCTATCTCTATATAAGCAGTCTACCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGA

Protein sequence

MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATKTVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI

Homology

[Close]

BLAST of Lsi08G016220 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-54
Identity = 112/257 (43.58%), Postives = 146/257 (56.81%), Query Frame = 0


Query: 7   RSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTC 66
           R S KDSLK LE D+Q AN LA+  P    G Y+QM+L Y+  A  FLFL+QW DC    
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH--- 61

Query: 67  ILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATKTVILPS 126
                L    IL+YKA          Y DG+  +S H RK ++++FY        V+ PS
Sbjct: 62  -FAGALGLLRILIYKA----------YVDGKTTMSLHERKTSIREFY-------DVLFPS 121

Query: 127 LQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPSTKMVLPN 186
           L +L     + +  K+K +      ++     GK+S  DLERE+ECGICLE   K+VLP 
Sbjct: 122 LLQLHGGITDVEERKQKEICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPT 181

Query: 187 CCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYL 246
           C HSMCI CY NW  RS+SCPFCRGSLKR+ S DLW+ TC+ ++ D   + KE+L R  +
Sbjct: 182 CNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLI 237

Query: 247 YISSLPKEYPDALFLVY 264
           YI  LP    D   + Y
Sbjct: 242 YIDKLPLVTSDPNLVPY 237

[Close]

BLAST of Lsi08G016220 vs. ExPASy TrEMBL
Match: A0A5A7V5Q1 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001750 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.1e-132
Identity = 241/268 (89.93%), Postives = 244/268 (91.04%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LA SSC DSLKVLEEDV+RANALAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPRYLNFFHILVYKAGLS      VYTDGR NISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRYLNFFHILVYKAGLS------VYTDGRPNISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQAN EEFDNAKEK  KS NSSERR+QGDGKLSN DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQANVEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 255

[Close]

BLAST of Lsi08G016220 vs. ExPASy TrEMBL
Match: A0A1S3BB06 (uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.4e-129
Identity = 237/268 (88.43%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LA SSC DSLKVLEEDV+RANALAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPRYLNFFHILVYK          VYTDGR NISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRYLNFFHILVYK----------VYTDGRPNISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQAN EEFDNAKEK  KS NSSERR+QGDGKLSN DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQANVEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Lsi08G016220 vs. ExPASy TrEMBL
Match: A0A0A0LMV8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.9e-127
Identity = 233/268 (86.94%), Postives = 239/268 (89.18%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LA SSC DSLKVLEEDV+RAN LAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPRYLNFFHILVYK          VYTDGR NISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRYLNFFHILVYK----------VYTDGRPNISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQA+ EEFD+AK+K  KS NSSERR+QGDGKLSN DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQADIEEFDSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Lsi08G016220 vs. ExPASy TrEMBL
Match: B7SHK9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 8.5e-127
Identity = 232/268 (86.57%), Postives = 238/268 (88.81%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LA SSC DSLKVLEEDV+RAN LAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPRYLNFFHILVYK          VYTDGR NISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRYLNFFHILVYK----------VYTDGRPNISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQA+ EEFD+AK+K  KS NSSERR+QGDGKLSN DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQADIEEFDSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KM LPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMALPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Lsi08G016220 vs. ExPASy TrEMBL
Match: A0A6J1BQ55 (RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.7e-123
Identity = 224/270 (82.96%), Postives = 239/270 (88.52%), Query Frame = 0


Query: 1   MYYQLAR--SSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60
           MYY+L R  SSCKDS+KVLEEDVQRANALAA IPRAKHGSYLQMKLVYN LAP FLFLMQ
Sbjct: 1   MYYRLTRSSSSCKDSMKVLEEDVQRANALAAAIPRAKHGSYLQMKLVYNHLAPLFLFLMQ 60

Query: 61  WLDCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLA 120
           W+DCSCTCILPRYLNFFHIL+YK          VYTDGR NISAHGRKAT+KDFY     
Sbjct: 61  WVDCSCTCILPRYLNFFHILIYK----------VYTDGRPNISAHGRKATIKDFY----- 120

Query: 121 TKTVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEP 180
              VILPSLQRLQAN +E D+A ++RVK+ NS+++R QGDGKLSN DLEREDECGICLEP
Sbjct: 121 --AVILPSLQRLQANVDELDSAIDRRVKADNSNDKRAQGDGKLSNGDLEREDECGICLEP 180

Query: 181 STKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSK 240
           STKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSL+RIKSEDLWVLTC+EDVVDAEKVSK
Sbjct: 181 STKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLRRIKSEDLWVLTCSEDVVDAEKVSK 240

Query: 241 EDLSRFYLYISSLPKEYPDALFLVYYEYLI 269
           EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 EDLSRFYLYISSLPKEYPDALFLVYYEYLI 253

[Close]

BLAST of Lsi08G016220 vs. NCBI nr
Match: KAA0061039.1 (hypothetical protein E6C27_scaffold501G001750 [Cucumis melo var. makuwa])

HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-131
Identity = 241/268 (89.93%), Postives = 244/268 (91.04%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LA SSC DSLKVLEEDV+RANALAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPRYLNFFHILVYKAGLS      VYTDGR NISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRYLNFFHILVYKAGLS------VYTDGRPNISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQAN EEFDNAKEK  KS NSSERR+QGDGKLSN DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQANVEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 255

[Close]

BLAST of Lsi08G016220 vs. NCBI nr
Match: XP_038885383.1 (E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida])

HSP 1 Score: 477.2 bits (1227), Expect = 9.0e-131
Identity = 241/268 (89.93%), Postives = 244/268 (91.04%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LARSSCKDSLKVLEEDVQ ANALAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLARSSCKDSLKVLEEDVQHANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPR LNFFHILVYK          VYTDGR +ISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRNLNFFHILVYK----------VYTDGRPSISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQANAEEFDNAKEKRVKSGNSSE+RVQGDGKLS  DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQANAEEFDNAKEKRVKSGNSSEKRVQGDGKLSKGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Lsi08G016220 vs. NCBI nr
Match: XP_008444404.1 (PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo])

HSP 1 Score: 471.5 bits (1212), Expect = 4.9e-129
Identity = 237/268 (88.43%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LA SSC DSLKVLEEDV+RANALAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPRYLNFFHILVYK          VYTDGR NISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRYLNFFHILVYK----------VYTDGRPNISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQAN EEFDNAKEK  KS NSSERR+QGDGKLSN DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQANVEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Lsi08G016220 vs. NCBI nr
Match: XP_004142955.1 (E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN62344.1 hypothetical protein Csa_018738 [Cucumis sativus])

HSP 1 Score: 464.5 bits (1194), Expect = 6.0e-127
Identity = 233/268 (86.94%), Postives = 239/268 (89.18%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LA SSC DSLKVLEEDV+RAN LAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPRYLNFFHILVYK          VYTDGR NISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRYLNFFHILVYK----------VYTDGRPNISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQA+ EEFD+AK+K  KS NSSERR+QGDGKLSN DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQADIEEFDSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Lsi08G016220 vs. NCBI nr
Match: ACA50446.1 (putative protein-binding/zinc ion-binding protein [Cucumis sativus])

HSP 1 Score: 463.0 bits (1190), Expect = 1.8e-126
Identity = 232/268 (86.57%), Postives = 238/268 (88.81%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYY+LA SSC DSLKVLEEDV+RAN LAA IPRAKHGSYLQMKLVYNQLAPFFLFLMQWL
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           DCSCTCILPRYLNFFHILVYK          VYTDGR NISAHGRKATVKDFY       
Sbjct: 61  DCSCTCILPRYLNFFHILVYK----------VYTDGRPNISAHGRKATVKDFY------- 120

Query: 121 TVILPSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPST 180
            VILPSLQRLQA+ EEFD+AK+K  KS NSSERR+QGDGKLSN DLEREDECGICLEPST
Sbjct: 121 AVILPSLQRLQADIEEFDSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPST 180

Query: 181 KMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240
           KM LPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED
Sbjct: 181 KMALPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKED 240

Query: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 269
           LSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 241 LSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Lsi08G016220 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 321.6 bits (823), Expect = 5.9e-88
Identity = 163/270 (60.37%), Postives = 200/270 (74.07%), Query Frame = 0


Query: 1   MYYQLARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60
           MYYQL +SS +DSLK+LE D++ AN LAA IP  K G  LQMKLV + LAPFF+FL+QW+
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  DCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATK 120
           D S  C+LPRY +FFHIL+YK          V  DGR N S +GRKAT+++FYG      
Sbjct: 61  DFS--CLLPRYFDFFHILIYK----------VRADGRWNRSRYGRKATIREFYG------ 120

Query: 121 TVILPSLQRLQANAEEF--DNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEP 180
            VILPSL+RL  N  +   ++      K+    +  ++G   +++ DLEREDECGICLEP
Sbjct: 121 -VILPSLERLHINFADLPDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEP 180

Query: 181 STKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSK 240
            TKMVLPNCCH+MCIKCY NWNT+SESCPFCRGS+KR+ SEDLWVLTC+EDVVD E V+K
Sbjct: 181 CTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTK 240

Query: 241 EDLSRFYLYISSLPKEYPDALFLVYYEYLI 269
           EDL RFYL+I+SLPK+YP+A FLVY EYLI
Sbjct: 241 EDLLRFYLHINSLPKDYPEAAFLVYNEYLI 251

[Close]

BLAST of Lsi08G016220 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 291.6 bits (745), Expect = 6.5e-79
Identity = 153/276 (55.43%), Postives = 188/276 (68.12%), Query Frame = 0


Query: 1   MYYQLARSSCK------DSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFL 60
           MY QLA SS        +SLKVLE DVQ AN+LA  IP  K+   LQMKLV++  A   L
Sbjct: 1   MYNQLAISSSSSSSSYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLL 60

Query: 61  FLMQWLDCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYG 120
           FL++W+D S +C++PRYLN FH+LVYK          V +DG+  ++ HGRKAT+ +FYG
Sbjct: 61  FLLRWIDLSSSCLIPRYLNLFHVLVYK----------VQSDGQPKLTTHGRKATISEFYG 120

Query: 121 TFLATKTVILPSLQRLQANAEEFDNA----KEKRVKSGNSSERRVQGDGKLSNCDLERED 180
                  VILPSLQ L +N +E +        KR+    + E R     + SN  LERE+
Sbjct: 121 -------VILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEAR---SSRFSNAGLEREE 180

Query: 181 ECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDV 240
           ECGICLE  TKMVLPNCCHSMCIKCY NWN +S+SCPFCRGS+KR+ SEDLWVL  + DV
Sbjct: 181 ECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDV 240

Query: 241 VDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEY 267
           VD    S+EDL RFYLYI+SLPK+YP+ALF+VYYEY
Sbjct: 241 VDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 256

[Close]

BLAST of Lsi08G016220 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 261.2 bits (666), Expect = 9.4e-70
Identity = 131/236 (55.51%), Postives = 164/236 (69.49%), Query Frame = 0


Query: 35  KHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKAGLSFLDLFNVYT 94
           K+   LQMKLV++  A   LFL++W+D S +C++PRYLN FH+LVYK          V +
Sbjct: 3   KNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYK----------VQS 62

Query: 95  DGRLNISAHGRKATVKDFYGTFLATKTVILPSLQRLQANAEEFDNA----KEKRVKSGNS 154
           DG+  ++ HGRKAT+ +FYG       VILPSLQ L +N +E +        KR+    +
Sbjct: 63  DGQPKLTTHGRKATISEFYG-------VILPSLQLLHSNLDELETTDIGFDLKRLSKKIT 122

Query: 155 SERRVQGDGKLSNCDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCR 214
            E R     + SN  LERE+ECGICLE  TKMVLPNCCHSMCIKCY NWN +S+SCPFCR
Sbjct: 123 KEAR---SSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCR 182

Query: 215 GSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEY 267
           GS+KR+ SEDLWVL  + DVVD    S+EDL RFYLYI+SLPK+YP+ALF+VYYEY
Sbjct: 183 GSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of Lsi08G016220 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-55
Identity = 112/257 (43.58%), Postives = 146/257 (56.81%), Query Frame = 0


Query: 7   RSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTC 66
           R S KDSLK LE D+Q AN LA+  P    G Y+QM+L Y+  A  FLFL+QW DC    
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH--- 61

Query: 67  ILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATKTVILPS 126
                L    IL+YKA          Y DG+  +S H RK ++++FY        V+ PS
Sbjct: 62  -FAGALGLLRILIYKA----------YVDGKTTMSLHERKTSIREFY-------DVLFPS 121

Query: 127 LQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPSTKMVLPN 186
           L +L     + +  K+K +      ++     GK+S  DLERE+ECGICLE   K+VLP 
Sbjct: 122 LLQLHGGITDVEERKQKEICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPT 181

Query: 187 CCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYL 246
           C HSMCI CY NW  RS+SCPFCRGSLKR+ S DLW+ TC+ ++ D   + KE+L R  +
Sbjct: 182 CNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLI 237

Query: 247 YISSLPKEYPDALFLVY 264
           YI  LP    D   + Y
Sbjct: 242 YIDKLPLVTSDPNLVPY 237

[Close]

BLAST of Lsi08G016220 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 213.0 bits (541), Expect = 2.9e-55
Identity = 108/256 (42.19%), Postives = 157/256 (61.33%), Query Frame = 0


Query: 5   LARSSCKDSLKVLEEDVQRANALAATIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSC 64
           +A+ S KDSLK LE D+Q AN LA   PR K G+ +QM+L Y+  A FFLFL+QW DC  
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCK- 60

Query: 65  TCILPRYLNFFHILVYKAGLSFLDLFNVYTDGRLNISAHGRKATVKDFYGTFLATKTVIL 124
              L  +L    +L+Y            Y DG+  +S + RKA++++F       + VIL
Sbjct: 61  ---LAGFLGLLRVLIYM----------TYADGKTTMSVYERKASIREF-------QAVIL 120

Query: 125 PSLQRLQANAEEFDNAKEKRVKSGNSSERRVQGDGKLSNCDLEREDECGICLEPSTKMVL 184
           PSL +LQ    + D++K+K V        R + + ++S  ++ERE+ECGIC+E ++K+VL
Sbjct: 121 PSLSQLQRGVTDIDDSKQKEV---CKMRYRKKDESEMSEIEIEREEECGICMEMNSKVVL 180

Query: 185 PNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRF 244
           PNC HS+CIKCY +W  RS+SCPFCR SLKR+ S DLW+     D V+   +++E+  R 
Sbjct: 181 PNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRL 232

Query: 245 YLYISSLPKEYPDALF 261
           ++YI  LP   PD ++
Sbjct: 241 FMYIEKLPLVVPDQVY 232

The following BLAST results are available for this feature:

BLAST of Lsi08G016220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	2.4e-54	43.58	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]

BLAST of Lsi08G016220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5Q1	5.1e-132	89.93	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BB06	2.4e-129	88.43	uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=...	[more]
A0A0A0LMV8	2.9e-127	86.94	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 P...	[more]
B7SHK9	8.5e-127	86.57	RING-type domain-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A6J1BQ55	5.7e-123	82.96	RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624...	[more]

BLAST of Lsi08G016220 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061039.1	1.1e-131	89.93	hypothetical protein E6C27_scaffold501G001750 [Cucumis melo var. makuwa]	[more]
XP_038885383.1	9.0e-131	89.93	E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida]	[more]
XP_008444404.1	4.9e-129	88.43	PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo]	[more]
XP_004142955.1	6.0e-127	86.94	E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN62344.1 hypothetical pro...	[more]
ACA50446.1	1.8e-126	86.57	putative protein-binding/zinc ion-binding protein [Cucumis sativus]	[more]

BLAST of Lsi08G016220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	5.9e-88	60.37	RING/U-box superfamily protein	[more]
AT1G13195.1	6.5e-79	55.43	RING/U-box superfamily protein	[more]
AT1G13195.2	9.4e-70	55.51	RING/U-box superfamily protein	[more]
AT5G01520.1	1.7e-55	43.58	RING/U-box superfamily protein	[more]
AT5G58787.1	2.9e-55	42.19	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 172..209 e-value: 9.9E-5 score: 31.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 170..210 e-value: 8.3E-8 score: 32.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 172..210 score: 11.751628
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 137..221 e-value: 1.8E-12 score: 48.5
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 5..268
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 5..268
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 164..216
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 187..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G016220.1	Lsi08G016220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity