Lsi08G016040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G016040
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA helicase family protein
Locationchr08: 23992699 .. 24005074 (+)
RNA-Seq ExpressionLsi08G016040
SyntenyLsi08G016040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAGACCAATGGGTCAGAGATTCAACTAGTTAGTATTGTGATCCAAGAATAGAGGTAGCAGAAACTCGAATCTGTAATCTGGTGCCGCTCTTGCGAGTTTACAAGTTCATACAAAGTTGAGGAGAGTACCGGAGTAGACTCATCAATGGCGCAGCTCCCAATTCTCCAATTCGAGGAGAAAATCATCGAAACAGTGGAGCAGAACCAAGTGGTAGTCATAATTGGAGAGACAGGTTCAGGGAAGAGCACTCAGCTCTCTCAAATGCTCCACCGGAGAGGATACACAAAGTCCGGTATTATCGGCGTCACTCAGCCTCGCCGAGTTGCCGCCGTTTCTGTTGCTCGGTACACTCCTAATTTGTTTACTTTATTGCAAACTGCGTCGCCTTTTTTTGTAGAACTCGGAATCGTGTTGCTGTGAATGATGTAACTAATTGTGTTTTGTGAGGAAGTAATGGAGGACATGTGTATGAAAATCCTGAATATAAGTGATCAAATAGTTAATTTATGGACTGTTTAAACTGGCAGTCGAGTTGCAGAGGAGCTAGGCGTTCATCTTGGTGAGGAAGTAGGATATGCAATTCGTTTTGAGGACAGAACCTCAGAAAGAACTCGAATCAAGTAACTGAAATATATTTTTGTGCGTTGAAGTTAGCGAAGTACTTTGTTGTTTTGTTTGATTCCAAGTTTTCTTGCAACTGACTGTAGGATTGTAAACTGCTCAGATACCTCACTGATGGAGTCCTCCTTCGCGAAAGTCTTTCTGATCCCGAGCTTGGTCAATATTCAGTTATTATATTGGACGAGGCTCATGAGAGAAGCTTAAATACGTGAGTTGCATCTCGTGAATACCAGTGCCCAGTCCCATCTAACACCTCGTTATTTGGCATTTCCTTCTTGTTGGTCCAACAAAGTTGTTTTGTTGTTGTTTTGCTGTTTGTGGCACTCGCTCATTTGTTCTCTCACACTTGCACCTAAACAATGATTTCAACTTCTTTATGATTTTTTCAGAGACACATTGATGGGGCTGATGAAACGTTTAATTAGAATGCGTAATTCCAACTTGAAGGTTCTTATCACTTCAGCGACCCTTGACGGGGACAAAGTATCAAAGTTCTTTTTCGATTGCCCTGTGCTGACAGTTCCTGGAAAGTTGCATCCTGTTGAGATATTGTATAGCAATGAACGTCCAAAGAGCTATATTGAATCATGTCTAAAAACGGCTATTGGTATGATTACAATTTTCATCTAATTTATATCGTGATTTTAAATCTTATCTACAAAAGGGGTCGGTTTCTTACAACAATCATCCAGGCTTATTGTGGGCCTAATTATTGTTTACATCCCTCGTAGAGTCTTTTTTTTCCTCAATGTAATCGCTTCCTTAATAAAAAGCTGTAGAAGGGCTGTAGGTTTAATATTCCCATATATCAATCCTTTCTATCCACTTCTAGACTTTCTTAGTTAAATACTGAAGAAGTTGCATTGACTATTTGCTAGATATACACACCAAAGAACCAGAAGGGGATGTTCTCATTTTCATGACTGGACAGGTACTTTTGTTTCACAATTTGTTTTTTTTTTTTTATAAATAACCAAGTTTTCATTGAGGGAAAAAAAAACGAAAGAATAAAGGGCATACAAGAAAGAGGGTCCACAAAAGATAGAGGCAACCTAAAGGAAAGGCCTCCAGTCGAGCAAGATGAAACTAATTTGTATTCTTGACACTCTATTGGGCATTTATTTTCAGCTAATTGTTTCTTTCATTAAAACAATTTAATTTTGAAGGATGATATAGAGAAGTTAGTATCAAAGTTGGAGGAAAAAGTTTATAATCTGGAAGAAGGATCTTGCATGGATGCTATAATTCTTCCCCTTCATGGTTCACTGCCACCAGAACTGCAGGCAAGTAAACTATTTTATTTCACTTAGAAAACTGGTTGGGGCAAGGTTGAATTCTTTATTTATTATTGGTCTAAAAACATATAATATTTTGGGCTACTGTAGAGTTGTTCTCAAAACTTATACTTTTAATTTTTTTTAAAAAAATAAAACTTCAGAACAAACATTTTTCTTTAGTTATTTATTAAAAGTTACAATTACATTCGTTTGATGATTATTAGTGATTGGAAGACCCTCCTTGTATTAGCTCTCTTTGGGGGTTGCCTCAACCTCGCCCCTAGGCTATTGTTTCTTATATATATGTGTGTGTATATATATTAATTAATTAAAAGTTGTTATTGAATTGCTTTTTCTTGTTCTTTTATTTCAATTATCATGAACTTTTAAATAGTAATTTCAAGTGCATGGTAGGATTAGTTTCCAAAAAGGAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAAAAAGAAAAAGGAAAAAATAGTGCTAGGTAGGATGTTTACAAGCCTACCTATTCAACCTTCTTTAAAATGTTCTTAAATAAAAATGTAAAATAATTGAAGAAAATCTCCCAAACATGCACAAATTTTGGTACTTTGTTTTGGGCAGTTACTGTGTAATTTTAATTTTCATGGAGGATTTCACTTTCTCTTGCATTGTTGTGAATATCTATTAATTGATTAATACTTTATTTTATATCCTTAACCTTGCTTTAGGGACAAGAGTAGGAGATTAATAAGCCCACGCGCCTTCATTTTTCTTGACCTTAGTTTATCACGTATGATTGTGCCTCAACTGATAGCATTTACCTCCAATCATTCTTGGATTTCTAATTATTCTCCTCCCTGGGGTTTACTTGATAGTTGATCCTATAACATTTTGATATCACATCATGCTTTTTTTTATCAAGTTCAGGCTTAAATTTCAAAAACAGAAAACTAAAAACAAAATTGTTACCAAATGGGGCTTAAGAAGAAATGATGTAGATGTTACATGTAGGAGCCATTCAGTTTTCATGGTACTTTATGTCTGACACATCGTCTTTACCACTTAGGTGCGTGTATTTAGTCGCCCACCTCCAAATTGTAGGAGATTTATTGCAGCAACCAATATTGCTGAAACTTCTTTGACTGTTGATGGTGTTGTGTAAGTAAATTAGGTAAATCTCTTTGGAAGTTCTTTATTTTTAATTCATATTGAACTGCATCCCAACGGTAAGCATGTATACATAGGTATGTCATTGATTCTGGTTATGTCAAGCAACGGCAATACAACCCATCAACTGGCATGTACTCCCTCGATGTTGTACAAATTAGCAAGTATGTACTCTACTTCACTGACTATTAAGCTATCTCGTTGGAATGTTTTAAAGTTAGCTCTTAATGAAAGTTATGTTTCTTATTAAAAAACAAAGATGGTTGTCATTGTCTTTTACCTTTCTATACTCTTTGCTGAATGTTTTTGATGCTAGAATTTGGCTGAATATATGATCATCCTGGAATTATCCTTTTAAAATTCCCTCTTATTGATTTGTTTATATATTATAAAACTGTTGGCAAAGTTTGGTGCCTCTTTGGGCAATTGGTTTCCAAAGGCTTCTGGAAAATCTCTTGTAACTGTGAGCAGGTTTTGCCATCTAGTGTCAAGATCACGATGGGGAATGGTGAAAGTACCAAATTATGAATCCCTTTCTTCTGCTTTCCCTGATCTCAATGCAATATCCAACAGCAAAGGTCTAAAGATCAGCCAAGTGTGAAGACCCTCCAATTCTTCCTCAACTAAACTATTCTCTTATGGCCACTTTTGGATTTCTCCAAAGGCCTCTCTTGCGGGTTGATGCCTGTGGAAAACAAATGAAGTTGGAATTCTGACACCTTTAGTTCCTTATGTTTCAAGTTTATTTTTGAAGAGATCAAGGACAATGAAATATCTTTGCAAATGGGTGTGAAAGGACAAACATCCCATTGCATTTCTACACACTTCTGATATATGTGCAAGCGTAAACTTGATCTTATCTATTTTTAGCTGCCCATGGCCCTCAACTTCGACAATTCCCTTCTGGATGAAGGTTGTTTTGCTTCTGTTCCGAACAACATTCCAACCTAGCTGGCCTCTCTCTTAAGAGGACATACATTCTTTCTCGATTGAGCTAAGTTACTTTATATATATATATTAACAACAAAGCTTTTCCTTATGAGGAAAACTCCTCTGTCTCTGTTTCTTTGGCAGTAGTAACTGGTTTTGTAGCTGCTACTTGGTGTAGGCTCAACAATTCTTTTTGGAACTATCTATCTTATATTCACTTTGCTCTGATTGGAACCTTTTTTGTATTTTCCCTAACTTGAAAGGAGGGTTGCCAGTGGTAACTTTGTACAATTTGTATTTGCTGAATTCATGTACATGATCATGTACTGGTTTTCTCATCTTAAGTTTTATGTCTTGGGCATAGAGTGCAAGCAAATCAACGTGCTGGGCGAGCTGGAAGAACACGTCCAGGGAAGTGCTATAGGATGTACACTTCCATGGATTATCAAGAGGAGTTATTGGATGTAACAGTTCCTGAAATACAACGATCTTCTCTTGCTGGCAGTGTTCTTTATTTGAAATCATTGGACCTTCCAGATATTGATATTCTCAGATTTGATTTTCTTGATCCACCTACCTGTAAGTATCGATATTAAGCTCTACAATCTTTCTTGGTTGCAGCTGAATATGATAACTAAATCTAACTGGTTTTGGCAGCCGAATCTTTAGAAGATGCATTGAAGCAACTATATCTTATTGATGCTATTGATGAAAATGGATCTATTACCAGAATTGGGCAAACAATGGCTGGTACTACTCTCAATAACTACCACTATCTAATTACTTCATTTTGTGCTTATGGAGTTCATAAACGATACATTCTTATTCATGATTATGATTGCAGCAGAATCACAATCCTGTGATTTAGGTGTGGGTGTTTTGTCAAAATGGATGACATTTTACTCACATTGTATCTATTTCTATCATTGTTGGATTAAGATTCCGTGCAAGCTTCAATGCTTTATGTTGGATTTTTGGTGTACAAGTTCTTTTTGTTTGATAACTGATAGACGTACAGGATAAAAGAAAAATGATAGTTGTACTGCAATTATTTCTCTTTCTTATTAACTCTATTTGCATATCTAAATGTAGGTCAAACAATTAATCAGTTTTGGTGCTACTTTTTATGATCTCTTGTGCAGAGCTTCCATTAGAACCTTCACTCTCACGAACCTTGATAGAGGCAAATGAGTATGGCTGTATTACCCAGGCTTTGACTGTTGCTGCAATGTTATCTGCAGAGACAACCTTGATTCCTGGTCACAGGTATATTGTCAGTAAGTCTGTAGACTTATACCATAGGCTATGTACCGCCTGTTGATCTGATTTGCTTTGAAGTCCCTAACTTCTATACGTAATTCATATGTATCCTGCATATTTTTTATTTTTTCATTCCACCTAATTTTAACATCTTTTTGTTCTCAATTTGATGAAATCTAGTGAGCCATTTTTATACAAATTAGTTTGTAGTGTCAATGAAATGATTGTACAACCTCAGAATTTATCTCACGGCCAGTGCATCACAACTTAGGAAATTAACTATCATTGTATAGAACTACATATGTTGATGTACACCGCTCAGTTTCTGATTGTACCGTTTGGCCATTAAAATCTGAACCGTCTCGCTGTTTATGGATGCTCCAGCGTTGTTTTCAAGTGTCATTATTTGAGAATTTCCTCTCATACAATTATGTAAGACTATTAACTTTTCAATTTTCTTGAAGTATCACTCTTAATATTAAGGGCATGTTTGATAGTGATTCTAAAATAGTTCAAATCAATTTTATCATTTGCAAAATCACTATAAAACATGTTTTTAATCATTCAAAACTAATTTTGATGATATGAAAATAGCACCTCAAAGTGAAATTTAATATTAAATTAATTTTGAATGATTAAAAATGTATTTTAGAGTGATTTTAAAAATGATAAAAATGATTTTGACGATTTTAAAATCACTCTCAAACATGTACTAAGATAGTTGCTGATCCCTACATCTTTTATGATTTATCCATTGAATATATAGAATAGAACCTACACATTGACAATAGAATGTGTGAGCTTATATTCAGCTTCATATCATATTCTTATGATCGTTGGTTACACGGCATTAATGAAGTGAGCATGTCTGGTCGATCCTCTCAGTGATGATATACCTGCTTTTTCCTGTAGAAAGAATGCTGAAAAGAAGAGGAAGCACAGGTCCTTGGACCTTCCTGATGGCTCAGGCTGGGGTGACCACATCCAATTGCTACAGATCTTTGAGCTCTGGGATCAAAAGAATTATGATGTTAACTGGTGCAAAGACCATGATTTGCAGGCAAGTTCAAGTATACTGATTCTGAAATCATATTCATGCTTGGTGTTAACTGTAAGATAGAAATTAGTAACCAAACTATATGGCTTATACATGCTATGGGAGAAATTTTTGAGGAATATACAATTGGGTGAAATTTTTGAATAAGATCGTGCTATTTTGAAATCTGATGGGGTTTTCCGTAGTAGTCCAAAAGGGGCTGGTTTAGTTTTCAGCATGCTTTGCTTGCCTGTAAAGATAGGATAGATAAAACTTATTCCATTTTTATAATTTGATGGTTGGCTGTTTCCTCACTTTCCTGTGGTCATCTAATAGAAAAGAAAAGGAAAAAAAAAAGAGAATTCAAAATTTTGTCAATGAGCTTCGTAGGCACTTTTTTGAAAAGTTTGGTCGATGAGCTTCATTGCCCTTTTGTAAATTTCATACATCAATGAAATTTGTCTCTCGTAACAGGAAAAAAAAAGGTTTGGTCATAAAGAAATAGGATAAATTTTGACTGAAGAGAAGAATTTTTATGATTTTTCTGTTAAAAGAAAAGAATTCGCCACAGAAATTCGTTAGGATAAAAAGGCTACTTTTTTCCCCCTTTAAGGGTGTTTGTTTCAAGGGTTGGGATTGGATGGGTTAGGCATCTTAAGCCCAACCCTTGTTTGGGACAAGGATATAGGAAGTCTTGGTTTCTTACATCTTTTCCCATGGGTTTGAATAGGCATCATAATGCTCAAGATCCGTCTATTGAATTTTATGGATAAGCTAGTAATTCCTGTAACTTATGAAGCCCAGATGTGGACTCAGATATGACCATATGCTAATTTCTGTAAAACTAGGACGCAACATGTCGAGTAGACATTTTTTTTAGTATATGTGTGTACCTTTTTATTTTTTTTGGTTGAAAAAGTGTATATTCATCATTTTAGTACTTCCCAATCATAATATATAAAAGATATAAAGTTAACCTAATAAAAAAATGCAGTTAAAAAAGAAACATAAAACATAAAATGTTAAGTCAATTGACAAAAGTACAAAACCCATAATCCCACGTTTAGCAAAAGAAAGCACCGACACAAACTAGAGTAGAGTCGAGAGACTTTTAGATTAGAGAATAAATTGAGGGAGGCTGGAAATTTGCGAACTACGGTGAAGTGTCTTTTGGCGACGTGGCATGTGACAATGAGGGGAAGTGGAGATGGGAGAGCGAATGTACTGATGCATGTTTGACTTTTCTACTTCGTCCTATTTTCTTTGAACGTTCTATATTCTAATCTTAGAATTTTTCATTTAACTTGATTGGGTTGGGCAATTTGGTTTTTTTTTTGGGCTCCATATTCTGGATTTTATCCTTTATATGTCCCAACTTGTGTCCTAGCACGTTGGAATTTAAAATAATAATAATTAAAAAAGATTCAGATTTTTGCATGTCCAACACGTTTAGGACTAGCTCATGTCTGACACGTTTTTGACATAGACATTATCCCTAGTGTTTGTGCTTTATTGGCCATAGTAGTCGTGGGTTCTTTAATGTACCTTGTAAAACTGCCCATCACACTATGGAGTTGCTGAAAATGGCGCTAGATTTAAGTCACTACAAGGTAGCTAATGTCTCTAAACGAAAAACCTTTTGTGAATGCTCACCATAGCCCATAGGACATATGAGCATCTTACAATAATCAGAACACAAAGAAATTTTATTTTTGGCTATTCTAAAAGTTTTCTTATTACACGAGAATTCATAGAAAAAAAATGAGAAGGAAAAAGAACCAATTAATTTATTAAGGAGAGTAAAGCAAATGATGGAATTGCTCCAGCCTCCAACTCCAAACACCCTTTATTTTTCATGTACTACCTCAGGGAGGGAGTCTATTTGTAGAGGGAACAGGGAGGCTTCTCTTCTTAATTGTCCTATGTGCTTCCATATCAAAACCTAAGAACCATGAGTGGAATTCACATGGGTTTGATTCAAATCCAAGATTGATGAGTGGACAACAAAATGCCCACATGGATTTGGCAATTAACTAGGACTTTTTATTTGGAGTGCATTCCTTCCTTCTATTTGGAAACTAAGAAACATGAGTGCTTACCTTTCTTCTTGTAATTTCTTCTCTTACTAATGATTTTCATGTTCCTTAAGGATAAAACAAAACAAAACAAAGCAGAATGAAAGTAAATAAATAATTAGGAATCAACCACTTTTCTTTTGAAACTAAATAAATAATTAATGGTGGGAAATTAACTGTCAGAGCCTACTATTGCAGGTAAGAGGGATGTTATTTGTCAAAGACGTACGAAAACAGCTGTGTCAAATAATGCAGAAAATAGCCAAAGGTTGGTATTATTTCTGGTTTCATGTTTAAAAAATTAATGTGAAAATATTGGCTCCTTGTTTCTGGTTTAGGAAAGATGACACAAAGGATGGTATGAAATGTGACGCCTTATAGTTCCCAGTTTGGTTACAAAATGAATTTTTTTTTATTTTTAATAATTGGAAACCTCTAGTTTTGAGTTCAGCAATCATAGTGATGGATGTCCCGGTTGGCTACTTGAAATATTAAATTTAATGTAGTACTAATTACGGAGTTTAATCAAGAAATCCTTTGGTAATGACTGTAAAGACGACCATGAAGGCTGCAGATCATGTTTTTATGTGTTCTGTAGCTATCTAACTGTTGAAGAAGATCCTCAACTTTTTATTTGAAATGTGACGCCTTATAGTTCCCAGTTTGGTTACAAAATGAATTTTTTATTTTTATTTTTAATAATTGGAAACCTCTAGTTTTGAGTTCAGCAATCATAGTGATGGATGTCCCGGTTGGCTACTTGAAATATTAAATTTAATGTAGTACTAATTACGGAGTTTAATCAAGAAATCCTTTGGTAATGACTGTAAAGACGACCATGAAGGCTGCAGATCATGTTTTTATGTGTTCTGTAGCTATCTAACTGTTGAAGAAGATCCTCAACTTTTTCAAGCTACAGATTATCTTCCTGGGGACTTGGGAGTAAGAAGGACTGTTTTTATGCTAATGCTAACAGCTAAGAGGCAATCTTTTAAGGAAGAGCCAAGATCTTATGGCTGAATAGGTTAGAGGGGAATTATTGAGCTTTTCACGATGCAGAAACAGAAAACTTCAATTAGTAAACTGTGTTTGCGTTTTTTGATTTATTTAAAGAACAAAGAAAAAAAACTCCTTCATGAAATAAAAAATTACAAATAAGTAACAAGAGCTTGCATGGAAAAAGGACCAATAAACAACATGAAACGAACAGTAAACCAAGAAGATCCCAAAGCAACTAAACAGACCATTTACCCAAACAACTAGATTTAAAGACCCTCCTAAGTCCTATGTACTTAGCAAAACAATCCAAAACAGCAATTATATTATCTAACAATTCGTGAAGTGTGTTTGTAACTCCTTTTTCTTGGGGCTTTTAGTGACACATTTTGTTTCCTATATATATATCTGACAAACGTTTATACAATCTATTAGTCTTTGTCCTTTTGTTTTCCTCCAATATTCTAAGAACCCCACCACCTTTCCAAGTTCACGAAGCTTGAAATGAGGTATTACTATACATCACTCAAGAAACTTGTAGCCTTTGCCTTGGCTATTAGCTTAGAAAAGTTGGATTTTTTAATGTCTCAAGTAGTTGGTTCAACCTAATTGTCTCTGAACTGAATATTGTTACCTTCAATTCTGGGGTGCCTACCTCAATTTCCAATGCATGGGAACCAGCCAAACCTGAGCCTTAGTTTAACGTATTGAAATTCTCTTTAGTCCCCCCAGGATTTTGGTAGCTGTTTAAGGATATCCAAAATTGCCATGATACCTGGTTTATTATTTTGTTTAGTTATTCTTTTCTTTTCTTCCAGAGGTATAATTAAAGATTATTCCCTCTTGTTTCCTAATTTTTCTAGTGAAACACAGGATCATTGGACGTATGGTCATTCAGAAACCAAAAGGAGAGTCGAGCAGAGTACTGGAATTTGAGGAAGGCTTTATGTGTAGGTTATGCCAATCAACTTGCAGAGAGAATGGTTCATCACAATGGCTATCGAACTCTTAGTTTTAAGCCCCAAGTCGTTCAGGTACAATGTTGGAGTGTACTTTTGTAATACAGTATATGTTTTCTTAACTAGGCTAGGCACCGAGAGTTAACTTCTTTATGTGGTTCAAGTATTCTTTTTTGCTGAATGCTCAACCAATTCCTGCTTCATTGTTTGAAAGCTATCTAAACTGAAAGTCTCTATTGTAGGTGCATCCCTCGTCCGTTATGAAGCCAGATGAAGAGGGGAAATTTGCCGACTATGTTGTGTACCATGAGCTCATTACAACATCTCGACCCTATATGCGCAATGTCTGTGCAGTACAGGTTGATTGGGTTATGCCCATTTTAAACAAGGTTAAGAATCTAAATGTAAACAAATTAAGGTAAGCCAGTTTCACTTGATACCATCTTTTGTCAAGCAATTGACTTTTTTTAACAAATTGAAGTTTACTCATGGACGAGCTCAGTAGTTTTCTTCCCTTCACAGTGGTGGCAGTGCTGATCTTACGAGTGGGACAATAGAGGGCAACATTAAAAACTCTACGAAGAAAGAGGACGCTAGCACTGCATCAACTCTTGATGGCCATGATAACAAAATTCAGGCTGCTAGAGAACGGTTTCTTGCACGGAAAGGGAAGAAGTGACACTATGTGATCAAACAGGAGGATTGATACATGCTGATGCTGGTGAGTTATTTGTCTAACATTGTGGAGCCTGGGAAACATGAGCAAATTGACCACACTTTTTTTTTCTTTTTTTGGTAAGTTCTTGCTAATGTTTCCCTGCTCTGCAAAGCCTTTAGCTGCAATCAACGTCAATAGACATCTTGCACAGATTGGAAGTGTTTTGCCTCTGGATTGCGGTCAATGACTACAAAATTGAATGGAAATGAGATTTGGTCATAATGCTGAGTACTATAAAAAGCTACGCTTTCTTAGACTTCAATTTTGTTAGTTTGCCAGCAGCTTTATCGGCTGAAAATTCTCAATTTGCAGCACTGCAATGTGGTAGATACGAATCTTGAAGCCTTACTAGACTAGAGAGGTAAAACTATTTATGGATCGATATTAACTTTTAACATCACAGAAGTAGCTGTTGCATCTTGGAGAATAGCTTGCTATATATATATATATATATATATTTGGGTTCAACGACAGTGGGGTGGAGAATAATAACCTCAAACATCTTAGCGACTAATTGAAGTATATTCACGTCGGCAACCATTCTAAAAAGTTCAATAACAATAGTTTAATGTATTGTATGAACCTGATTGCTTGTTCTTGTAAGAGAGTTGAAAGAAAGCTATAAATACTCAAGAAATTACTAAATATAACATTTTCTC

mRNA sequence

TGGAAGACCAATGGGTCAGAGATTCAACTAGTTAGTATTGTGATCCAAGAATAGAGGTAGCAGAAACTCGAATCTGTAATCTGGTGCCGCTCTTGCGAGTTTACAAGTTCATACAAAGTTGAGGAGAGTACCGGAGTAGACTCATCAATGGCGCAGCTCCCAATTCTCCAATTCGAGGAGAAAATCATCGAAACAGTGGAGCAGAACCAAGTGGTAGTCATAATTGGAGAGACAGGTTCAGGGAAGAGCACTCAGCTCTCTCAAATGCTCCACCGGAGAGGATACACAAAGTCCGGTATTATCGGCGTCACTCAGCCTCGCCGAGTTGCCGCCGTTTCTGTTGCTCGTCGAGTTGCAGAGGAGCTAGGCGTTCATCTTGGTGAGGAAGTAGGATATGCAATTCGTTTTGAGGACAGAACCTCAGAAAGAACTCGAATCAAATACCTCACTGATGGAGTCCTCCTTCGCGAAAGTCTTTCTGATCCCGAGCTTGGTCAATATTCAGTTATTATATTGGACGAGGCTCATGAGAGAAGCTTAAATACAGACACATTGATGGGGCTGATGAAACGTTTAATTAGAATGCGTAATTCCAACTTGAAGGTTCTTATCACTTCAGCGACCCTTGACGGGGACAAAGTATCAAAGTTCTTTTTCGATTGCCCTGTGCTGACAGTTCCTGGAAAGTTGCATCCTGTTGAGATATTGTATAGCAATGAACGTCCAAAGAGCTATATTGAATCATGTCTAAAAACGGCTATTGCAACCAATATTGCTGAAACTTCTTTGACTGTTGATGGTGTTGTGTATGTCATTGATTCTGGTTATGTCAAGCAACGGCAATACAACCCATCAACTGGCATGTACTCCCTCGATGTTGTACAAATTAGCAAAGTGCAAGCAAATCAACGTGCTGGGCGAGCTGGAAGAACACGTCCAGGGAAGTGCTATAGGATGTACACTTCCATGGATTATCAAGAGGAGTTATTGGATGTAACAGTTCCTGAAATACAACGATCTTCTCTTGCTGGCAGTGTTCTTTATTTGAAATCATTGGACCTTCCAGATATTGATATTCTCAGATTTGATTTTCTTGATCCACCTACCTCCGAATCTTTAGAAGATGCATTGAAGCAACTATATCTTATTGATGCTATTGATGAAAATGGATCTATTACCAGAATTGGGCAAACAATGGCTGCAGAATCACAATCCTGTGATTTAGAGCTTCCATTAGAACCTTCACTCTCACGAACCTTGATAGAGGCAAATGAGTATGGCTGTATTACCCAGGCTTTGACTGTTGCTGCAATGTTATCTGCAGAGACAACCTTGATTCCTGGTCACAGAAAGAATGCTGAAAAGAAGAGGAAGCACAGGTCCTTGGACCTTCCTGATGGCTCAGGCTGGGGTGACCACATCCAATTGCTACAGATCTTTGAGCTCTGGGATCAAAAGAATTATGATGTTAACTGGTGCAAAGACCATGATTTGCAGGCAAGTTCAAGTATACTGATTCTGAAATCATATTCATGCTTGGTGTTAACTGTAAGAGGGATGTTATTTGTCAAAGACGTACGAAAACAGCTGTGTCAAATAATGCAGAAAATAGCCAAAGGATCATTGGACGTATGGTCATTCAGAAACCAAAAGGAGAGTCGAGCAGAGTACTGGAATTTGAGGAAGGCTTTATGTGTAGGTTATGCCAATCAACTTGCAGAGAGAATGGTTCATCACAATGGCTATCGAACTCTTAGTTTTAAGCCCCAAGTCGTTCAGGTGCATCCCTCGTCCGTTATGAAGCCAGATGAAGAGGGGAAATTTGCCGACTATGTTGTGTACCATGAGCTCATTACAACATCTCGACCCTATATGCGCAATGTCTGTGCAGTACAGGTTGATTGGGTTATGCCCATTTTAAACAAGGTTAAGAATCTAAATGTAAACAAATTAAGTGGTGGCAGTGCTGATCTTACGAGTGGGACAATAGAGGGCAACATTAAAAACTCTACGAAGAAAGAGGACGCTAGCACTGCATCAACTCTTGATGGCCATGATAACAAAATTCAGGCTGCTAGAGAACGGTTTCTTGCACGGAAAGGGAAGAAGTGACACTATGTGATCAAACAGGAGGATTGATACATGCTGATGCTGGTGAGTTATTTGTCTAACATTGTGGAGCCTGGGAAACATGAGCAAATTGACCACACTTTTTTTTTCTTTTTTTGGTAAGTTCTTGCTAATGTTTCCCTGCTCTGCAAAGCCTTTAGCTGCAATCAACGTCAATAGACATCTTGCACAGATTGGAAGTGTTTTGCCTCTGGATTGCGGTCAATGACTACAAAATTGAATGGAAATGAGATTTGGTCATAATGCTGAGTACTATAAAAAGCTACGCTTTCTTAGACTTCAATTTTGTTAGTTTGCCAGCAGCTTTATCGGCTGAAAATTCTCAATTTGCAGCACTGCAATGTGGTAGATACGAATCTTGAAGCCTTACTAGACTAGAGAGGTAAAACTATTTATGGATCGATATTAACTTTTAACATCACAGAAGTAGCTGTTGCATCTTGGAGAATAGCTTGCTATATATATATATATATATATATTTGGGTTCAACGACAGTGGGGTGGAGAATAATAACCTCAAACATCTTAGCGACTAATTGAAGTATATTCACGTCGGCAACCATTCTAAAAAGTTCAATAACAATAGTTTAATGTATTGTATGAACCTGATTGCTTGTTCTTGTAAGAGAGTTGAAAGAAAGCTATAAATACTCAAGAAATTACTAAATATAACATTTTCTC

Coding sequence (CDS)

ATGGCGCAGCTCCCAATTCTCCAATTCGAGGAGAAAATCATCGAAACAGTGGAGCAGAACCAAGTGGTAGTCATAATTGGAGAGACAGGTTCAGGGAAGAGCACTCAGCTCTCTCAAATGCTCCACCGGAGAGGATACACAAAGTCCGGTATTATCGGCGTCACTCAGCCTCGCCGAGTTGCCGCCGTTTCTGTTGCTCGTCGAGTTGCAGAGGAGCTAGGCGTTCATCTTGGTGAGGAAGTAGGATATGCAATTCGTTTTGAGGACAGAACCTCAGAAAGAACTCGAATCAAATACCTCACTGATGGAGTCCTCCTTCGCGAAAGTCTTTCTGATCCCGAGCTTGGTCAATATTCAGTTATTATATTGGACGAGGCTCATGAGAGAAGCTTAAATACAGACACATTGATGGGGCTGATGAAACGTTTAATTAGAATGCGTAATTCCAACTTGAAGGTTCTTATCACTTCAGCGACCCTTGACGGGGACAAAGTATCAAAGTTCTTTTTCGATTGCCCTGTGCTGACAGTTCCTGGAAAGTTGCATCCTGTTGAGATATTGTATAGCAATGAACGTCCAAAGAGCTATATTGAATCATGTCTAAAAACGGCTATTGCAACCAATATTGCTGAAACTTCTTTGACTGTTGATGGTGTTGTGTATGTCATTGATTCTGGTTATGTCAAGCAACGGCAATACAACCCATCAACTGGCATGTACTCCCTCGATGTTGTACAAATTAGCAAAGTGCAAGCAAATCAACGTGCTGGGCGAGCTGGAAGAACACGTCCAGGGAAGTGCTATAGGATGTACACTTCCATGGATTATCAAGAGGAGTTATTGGATGTAACAGTTCCTGAAATACAACGATCTTCTCTTGCTGGCAGTGTTCTTTATTTGAAATCATTGGACCTTCCAGATATTGATATTCTCAGATTTGATTTTCTTGATCCACCTACCTCCGAATCTTTAGAAGATGCATTGAAGCAACTATATCTTATTGATGCTATTGATGAAAATGGATCTATTACCAGAATTGGGCAAACAATGGCTGCAGAATCACAATCCTGTGATTTAGAGCTTCCATTAGAACCTTCACTCTCACGAACCTTGATAGAGGCAAATGAGTATGGCTGTATTACCCAGGCTTTGACTGTTGCTGCAATGTTATCTGCAGAGACAACCTTGATTCCTGGTCACAGAAAGAATGCTGAAAAGAAGAGGAAGCACAGGTCCTTGGACCTTCCTGATGGCTCAGGCTGGGGTGACCACATCCAATTGCTACAGATCTTTGAGCTCTGGGATCAAAAGAATTATGATGTTAACTGGTGCAAAGACCATGATTTGCAGGCAAGTTCAAGTATACTGATTCTGAAATCATATTCATGCTTGGTGTTAACTGTAAGAGGGATGTTATTTGTCAAAGACGTACGAAAACAGCTGTGTCAAATAATGCAGAAAATAGCCAAAGGATCATTGGACGTATGGTCATTCAGAAACCAAAAGGAGAGTCGAGCAGAGTACTGGAATTTGAGGAAGGCTTTATGTGTAGGTTATGCCAATCAACTTGCAGAGAGAATGGTTCATCACAATGGCTATCGAACTCTTAGTTTTAAGCCCCAAGTCGTTCAGGTGCATCCCTCGTCCGTTATGAAGCCAGATGAAGAGGGGAAATTTGCCGACTATGTTGTGTACCATGAGCTCATTACAACATCTCGACCCTATATGCGCAATGTCTGTGCAGTACAGGTTGATTGGGTTATGCCCATTTTAAACAAGGTTAAGAATCTAAATGTAAACAAATTAAGTGGTGGCAGTGCTGATCTTACGAGTGGGACAATAGAGGGCAACATTAAAAACTCTACGAAGAAAGAGGACGCTAGCACTGCATCAACTCTTGATGGCCATGATAACAAAATTCAGGCTGCTAGAGAACGGTTTCTTGCACGGAAAGGGAAGAAGTGA

Protein sequence

MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHPVEILYSNERPKSYIESCLKTAIATNIAETSLTVDGVVYVIDSGYVKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKKRKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTVRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERMVHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWVMPILNKVKNLNVNKLSGGSADLTSGTIEGNIKNSTKKEDASTASTLDGHDNKIQAARERFLARKGKK
Homology
BLAST of Lsi08G016040 vs. ExPASy Swiss-Prot
Match: Q93Y16 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 OS=Arabidopsis thaliana OX=3702 GN=At1g27900 PE=1 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 1.6e-248
Identity = 466/728 (64.01%), Postives = 538/728 (73.90%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MA LPILQFEEKI+ETVE+N VVVIIGETGSGKSTQLSQ+LHR GYTKSG+I +TQPRRV
Sbjct: 1   MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVA+EL V LGE+VGYAIRFEDRT+ +TRIKYLTDGVLLRESLS+P L  YSV
Sbjct: 61  AAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTD L+GL+KRL+R+R SN KVLITSATLDG+KVS+FF  CPVL VPGK
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYS ERP SYIES LK AI                                   
Sbjct: 181 LYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 +TNIAETSLTVDGVVYVIDSGY
Sbjct: 241 AEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPS+GM+SLDV+QISKVQANQRAGRAGRTRPGKCYR+Y    Y+++ LD T+PE
Sbjct: 301 VKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQR+SLAGSVLYLKSLDLPDIDIL+FDFLD P+SESLEDALKQLY IDAIDENG+ITRIG
Sbjct: 361 IQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           +TM+        +LPLEPSLSRTLIEANE GC++QALTV AMLSAETTL+P   K +EKK
Sbjct: 421 RTMS--------DLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKK 480

Query: 481 RKH-RSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVL 540
           RKH    +LP+GSG+GDHIQLLQIFE WD+ NYD  WCK++ +Q                
Sbjct: 481 RKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQ---------------- 540

Query: 541 TVRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAER 600
            VRGM+FVKDVR+QLCQIMQKI+K  L+V +   +  SR +Y  LRKALCVG ANQ+AER
Sbjct: 541 -VRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAER 600

Query: 601 MVHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDW 655
           M+ HNGYRTLSF+ Q+VQVHPSSV+  D +G   +YVVYHELI+T+RP+MRNVCAV + W
Sbjct: 601 MLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAW 660

BLAST of Lsi08G016040 vs. ExPASy Swiss-Prot
Match: O42643 (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp22 PE=1 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.2e-126
Identity = 265/671 (39.49%), Postives = 377/671 (56.18%), Query Frame = 0

Query: 4    LPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTK-SGIIGVTQPRRVAA 63
            LP+ +  ++ +E V +NQ++V++GETGSGK+TQ++Q L   GYT  S +IG TQPRRVAA
Sbjct: 510  LPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAA 569

Query: 64   VSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVII 123
            +SVA+RVAEE+G  +GEEVGY IRFED+TS  T+IKY+TDG+L RE L DP L +YSVII
Sbjct: 570  MSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVII 629

Query: 124  LDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLH 183
            LDEAHER++ TD L GL+K  + ++  +LK+++TSATLD ++ S +F+ CP+ T+PG+ +
Sbjct: 630  LDEAHERTVATDVLFGLLKGTV-LKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSY 689

Query: 184  PVEILYSNERPKSYIESCL----------------------------------------- 243
            PVEI+Y+ +    Y+++ L                                         
Sbjct: 690  PVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGD 749

Query: 244  -------------------------------KTAIATNIAETSLTVDGVVYVIDSGYVKQ 303
                                           K  IATNIAETSLT+DG+ YV+D G+VKQ
Sbjct: 750  SIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQ 809

Query: 304  RQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQR 363
              ++P  GM SL V  IS+ QA QR+GRAGRT PGKCYR+YT   Y+ E+L   +PEIQR
Sbjct: 810  SCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQR 869

Query: 364  SSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTM 423
             +L+ ++L LK++ +   D+L FDF+DPP ++++  AL+ LY + A+D+ G +T +G+ M
Sbjct: 870  QNLSHTILMLKAMGIN--DLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKM 929

Query: 424  AAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKKRKH 483
            A        + P+EP LS+ LI + E GC  + L++ AMLS          K  E  R+ 
Sbjct: 930  A--------DFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQR 989

Query: 484  RSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTVRG 543
                 P+     DH+ LL ++  W       NWC +H +QA                 RG
Sbjct: 990  AQFANPE----SDHLTLLNVYTTWKMNRCSDNWCYEHYIQA-----------------RG 1049

Query: 544  MLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERMVHH 599
            M   +DVRKQL ++M +       V S   ++E       + +ALC GY   +A+R  H 
Sbjct: 1050 MRRAEDVRKQLIRLMDRYRH---PVVSCGRKREL------ILRALCSGYFTNVAKRDSHE 1109

BLAST of Lsi08G016040 vs. ExPASy Swiss-Prot
Match: Q14562 (ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 9.9e-126
Identity = 263/660 (39.85%), Postives = 375/660 (56.82%), Query Frame = 0

Query: 4    LPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAV 63
            LPI + +E++++ V  NQ++++IGETGSGK+TQ++Q L   GYT  G IG TQPRRVAA+
Sbjct: 565  LPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAM 624

Query: 64   SVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIIL 123
            SVA+RV+EE G  LG+EVGY IRFED TS  T IKY+TDG+LLRE L DP+L QY++I+L
Sbjct: 625  SVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIML 684

Query: 124  DEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHP 183
            DEAHER+++TD L GL+K+ ++ R  ++K+++TSATLD  K S++F++ P+ T+PG+ +P
Sbjct: 685  DEAHERTIHTDVLFGLLKKTVQKR-QDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 744

Query: 184  VEILYSNERPKSYIESCL------------------------------------------ 243
            VEILY+ E    Y+++ L                                          
Sbjct: 745  VEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPD 804

Query: 244  ------------------------------KTAIATNIAETSLTVDGVVYVIDSGYVKQR 303
                                          K  IATNIAETSLT+DG+ YV+D G+VKQ+
Sbjct: 805  VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 864

Query: 304  QYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQRS 363
             YN  TG+  L V  IS+ QA QRAGRAGRT PGKCYR+YT   Y++E+L   VPEIQR+
Sbjct: 865  VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 924

Query: 364  SLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTMA 423
            +LA +VL LK++ +   D+L FDF+D P  E+L  A++QLY + A+D+ G +TR+G+ MA
Sbjct: 925  NLASTVLSLKAMGIN--DLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMA 984

Query: 424  AESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNA---EKKR 483
                    E PLEP L + LI +   GC  + LT+ +MLS +        K A   +KK 
Sbjct: 985  --------EFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1044

Query: 484  KHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTV 543
            K    +       GDH+ LL ++  W    +   WC ++ +QA                 
Sbjct: 1045 KFHQTE-------GDHLTLLAVYNSWKNNKFSNPWCYENFIQA----------------- 1104

Query: 544  RGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERMV 589
            R +   +D+RKQ+  IM    +  LDV S             ++KA+C G+    A++  
Sbjct: 1105 RSLRRAQDIRKQMLGIMD---RHKLDVVSCGKSTV------RVQKAICSGFFRNAAKK-D 1164

BLAST of Lsi08G016040 vs. ExPASy Swiss-Prot
Match: A2A4P0 (ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 9.9e-126
Identity = 263/660 (39.85%), Postives = 375/660 (56.82%), Query Frame = 0

Query: 4    LPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAV 63
            LPI + +E++++ V  NQ++++IGETGSGK+TQ++Q L   GYT  G IG TQPRRVAA+
Sbjct: 589  LPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAM 648

Query: 64   SVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIIL 123
            SVA+RV+EE G  LG+EVGY IRFED TS  T IKY+TDG+LLRE L DP+L QY++I+L
Sbjct: 649  SVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIML 708

Query: 124  DEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHP 183
            DEAHER+++TD L GL+K+ ++ R  ++K+++TSATLD  K S++F++ P+ T+PG+ +P
Sbjct: 709  DEAHERTIHTDVLFGLLKKTVQKR-QDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYP 768

Query: 184  VEILYSNERPKSYIESCL------------------------------------------ 243
            VEILY+ E    Y+++ L                                          
Sbjct: 769  VEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPD 828

Query: 244  ------------------------------KTAIATNIAETSLTVDGVVYVIDSGYVKQR 303
                                          K  IATNIAETSLT+DG+ YV+D G+VKQ+
Sbjct: 829  VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 888

Query: 304  QYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQRS 363
             YN  TG+  L V  IS+ QA QRAGRAGRT PGKCYR+YT   Y++E+L   VPEIQR+
Sbjct: 889  VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 948

Query: 364  SLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTMA 423
            +LA +VL LK++ +   D+L FDF+D P  E+L  A++QLY + A+D+ G +TR+G+ MA
Sbjct: 949  NLASTVLSLKAMGIN--DLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMA 1008

Query: 424  AESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNA---EKKR 483
                    E PLEP L + LI +   GC  + LT+ +MLS +        K A   +KK 
Sbjct: 1009 --------EFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1068

Query: 484  KHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTV 543
            K    +       GDH+ LL ++  W    +   WC ++ +QA                 
Sbjct: 1069 KFHQTE-------GDHLTLLAVYNSWKNNKFSNPWCYENFIQA----------------- 1128

Query: 544  RGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERMV 589
            R +   +D+RKQ+  IM    +  LDV S             ++KA+C G+    A++  
Sbjct: 1129 RSLRRAQDIRKQMLGIMD---RHKLDVVSCGKSTV------RVQKAICSGFFRNAAKK-D 1188

BLAST of Lsi08G016040 vs. ExPASy Swiss-Prot
Match: Q54F05 (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 3.8e-125
Identity = 269/674 (39.91%), Postives = 379/674 (56.23%), Query Frame = 0

Query: 4    LPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAV 63
            LPI    E  ++ V ++Q++V+IGETGSGK+TQ++Q L   GY   G IG TQPRRVAA+
Sbjct: 508  LPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAM 567

Query: 64   SVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIIL 123
            SV++RVAEE G  LG+EVGYAIRFED TS  T IK++TDG+LLRE L DP L  YSVIIL
Sbjct: 568  SVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIIL 627

Query: 124  DEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHP 183
            DEAHER+++TD L GL+K+ ++ R   LKVLITSATL+ +K SK+F +  +  +PG+  P
Sbjct: 628  DEAHERTISTDVLFGLLKQALQ-RRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFP 687

Query: 184  VEILYSNERPKSYIESCL------------------------------------------ 243
            V+I Y+ +    Y+++ L                                          
Sbjct: 688  VDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSN 747

Query: 244  ------------------------------KTAIATNIAETSLTVDGVVYVIDSGYVKQR 303
                                          K  IATNIAETSLT+DG+ YVID G+ KQ+
Sbjct: 748  VPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQK 807

Query: 304  QYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQRS 363
             +NP  GM SL V  IS+  A QR+GRAGRT PGKCYR+YT   ++ E+L  ++PEIQR+
Sbjct: 808  CFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRT 867

Query: 364  SLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTMA 423
            +L  +VL +K++ +   D+L FDF+DPP  ++L  A++QLY + A+DE G +TR+G+ MA
Sbjct: 868  NLGNTVLTMKAMGIN--DLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMA 927

Query: 424  AESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKKRKHR 483
                    E PL+P LS+ LI + + GC  + LTV AMLS +        K A   +K  
Sbjct: 928  --------EFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKA 987

Query: 484  SLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTVRGM 543
                P+    GDH+ LL ++E W    +   WC ++ +QA                 R +
Sbjct: 988  KFFQPE----GDHLTLLNVYESWKNSKFSNPWCFENFVQA-----------------RSL 1047

Query: 544  LFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVG-YANQLAERMVHH 603
               +DVRKQL  IM +     LD+ S      +   Y  ++KA+C G +AN  A +   +
Sbjct: 1048 RRAQDVRKQLITIMDRY---KLDIIS------AGRNYTKIQKAICSGFFAN--ASKKDPN 1107

BLAST of Lsi08G016040 vs. ExPASy TrEMBL
Match: A0A5A7V0E0 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001530 PE=4 SV=1)

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 609/727 (83.77%), Postives = 624/727 (85.83%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEELGV LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTDTLMGLMKRLIRMRNS+LKVLITSATLDGDKVSKFFFDCPVLTVPGK
Sbjct: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSHLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYSNERPKSYIESCLKTAI                                   
Sbjct: 181 LYPVEILYSNERPKSYIESCLKTAIDIHTKEPEGDVLIFLTGQDDIEKLVSKLEEKVYSL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAIILPLHGSLPPELQVRVFSCPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDIL+FDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           QTMA        ELPLEPSLSRTLIEANEYGCI+QALTV AMLSAETTL+PGHRKNA+KK
Sbjct: 421 QTMA--------ELPLEPSLSRTLIEANEYGCISQALTVVAMLSAETTLLPGHRKNADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RKHRSL+LPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASS              
Sbjct: 481 RKHRSLNLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASS-------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
             GMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKES+AEYWNLRKALCVGYAN+LAERM
Sbjct: 541 --GMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESQAEYWNLRKALCVGYANRLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDE+GKFADYVVYHELITTSRPYMRNVCAVQVDWV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEDGKFADYVVYHELITTSRPYMRNVCAVQVDWV 660

BLAST of Lsi08G016040 vs. ExPASy TrEMBL
Match: A0A0A0LNH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G350990 PE=4 SV=1)

HSP 1 Score: 1151.0 bits (2976), Expect = 0.0e+00
Identity = 605/727 (83.22%), Postives = 622/727 (85.56%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTDTLMGLMKRLIRMRNS+LKVLITSATLDGDKVSKFFFDCPVLTVPGK
Sbjct: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSHLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           LHPVEILYSNERPKSYIESCLKTAI                                   
Sbjct: 181 LHPVEILYSNERPKSYIESCLKTAIDIHTKEPEGDVLIFLTGQDDIEKLVSKLEEKVYSL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAIILPLHGSLPPELQVRVFSRPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           +TMA        ELPLEPSLSRTLIEANE+GCI+QALTV AMLSAETTL+PGHRK+A+KK
Sbjct: 421 KTMA--------ELPLEPSLSRTLIEANEFGCISQALTVVAMLSAETTLLPGHRKSADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RK+RSL+LPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQ                 
Sbjct: 481 RKNRSLNLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQ----------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
           VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQ+ES+AEYWNLRKALCVGYANQLAERM
Sbjct: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQRESQAEYWNLRKALCVGYANQLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRN+CAVQVDWV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNICAVQVDWV 660

BLAST of Lsi08G016040 vs. ExPASy TrEMBL
Match: A0A1S3BAD9 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487762 PE=4 SV=1)

HSP 1 Score: 1146.3 bits (2964), Expect = 0.0e+00
Identity = 607/727 (83.49%), Postives = 622/727 (85.56%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVE+NQVVVIIGETGSGKSTQLSQML+RRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVERNQVVVIIGETGSGKSTQLSQMLYRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEELGV LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTDTLMGLMKRLIRMRNS+LKVLITSATLDGDKVSKFFFDCPVLTVPGK
Sbjct: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSHLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYSNERPKSYIESCLKTAI                                   
Sbjct: 181 LYPVEILYSNERPKSYIESCLKTAIDIHTKEPEGDVLIFLTGQDDIEKLVSKLEEKVYSL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAIILPLHGSLPPELQVRVFSCPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDIL+FDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           QTMA        ELPLEPSLSRTLIEANEYGCI+QALTV AMLSAETTL+PGHRKNA+KK
Sbjct: 421 QTMA--------ELPLEPSLSRTLIEANEYGCISQALTVVAMLSAETTLLPGHRKNADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RKHRSL+LPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQ                 
Sbjct: 481 RKHRSLNLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQ----------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
           VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKES+AEYWNLRKALCVGYANQLAERM
Sbjct: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESQAEYWNLRKALCVGYANQLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDE+GKFADYVVYHELITTSRPYMRNVCAVQVDWV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEDGKFADYVVYHELITTSRPYMRNVCAVQVDWV 660

BLAST of Lsi08G016040 vs. ExPASy TrEMBL
Match: A0A6J1HH01 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462858 PE=4 SV=1)

HSP 1 Score: 1127.9 bits (2916), Expect = 0.0e+00
Identity = 594/727 (81.71%), Postives = 615/727 (84.59%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVE+NQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVEKNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEEL V LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELDVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTD LMGLMKRLIRMR+SNLKVLITSATLDGDKVSKFFFDCP+LTVPGK
Sbjct: 121 IILDEAHERSLNTDILMGLMKRLIRMRSSNLKVLITSATLDGDKVSKFFFDCPLLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYSNERPKSY+ESCLKTAI                                   
Sbjct: 181 LYPVEILYSNERPKSYLESCLKTAIDIHTKEPEGDVLIFMTGQDDIEKLVSKLEEKVYNL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAVVLPLHGSLPPELQVRVFSRPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYR+YTSMDYQE+LLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYTSMDYQEDLLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSIT+IG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITKIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           QTMA        ELPLEPSLSRTLIEANEYGCI+ ALTVAAMLSAETTL+PG RKNA+KK
Sbjct: 421 QTMA--------ELPLEPSLSRTLIEANEYGCISHALTVAAMLSAETTLLPGRRKNADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RKHRSLDLPDGSGWGDHIQLLQIFELWDQ+NYDVNWCKD +LQ                 
Sbjct: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQENYDVNWCKDRELQ----------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
           VRGMLFVKDVRKQLCQIMQKIAKGSLDVW+ RNQKESRAEYWNLRKALCVGYANQLAERM
Sbjct: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWTSRNQKESRAEYWNLRKALCVGYANQLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDE+GKFADYVVYHELITTSRP+MRNVCAVQV+WV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEDGKFADYVVYHELITTSRPFMRNVCAVQVEWV 660

BLAST of Lsi08G016040 vs. ExPASy TrEMBL
Match: A0A6J1K9J4 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491888 PE=4 SV=1)

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 593/727 (81.57%), Postives = 614/727 (84.46%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVE+NQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVEKNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEELGV LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTD LMGLMKRLIRMR+SNLKVLITSATLDGDKVSKFFFDCP+LTVPGK
Sbjct: 121 IILDEAHERSLNTDILMGLMKRLIRMRSSNLKVLITSATLDGDKVSKFFFDCPLLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYSNERPKSY+ESCLKTAI                                   
Sbjct: 181 LYPVEILYSNERPKSYLESCLKTAIDIHTKEPEGDVLIFMTGQDDIEKLVSKLEEKVYNL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAVVLPLHGSLPPELQVRVFSRPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYR+YTSMDYQE+LLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYTSMDYQEDLLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSIT+IG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITKIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           QTMA        ELPLEPSLSRTLIEANEYGCI+ ALTVAAMLSAETTL+PG RKNA+KK
Sbjct: 421 QTMA--------ELPLEPSLSRTLIEANEYGCISHALTVAAMLSAETTLLPGRRKNADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RKHR +D PDGSGWGDHIQLLQIFELWDQ+NYDVNWCKD DLQ                 
Sbjct: 481 RKHRPVDPPDGSGWGDHIQLLQIFELWDQENYDVNWCKDRDLQ----------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
           VRGMLFVKDVRKQLCQIMQKIAKGSLDVW+ RNQKESRAEYWNLRKALCVGYANQLAERM
Sbjct: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWTSRNQKESRAEYWNLRKALCVGYANQLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDE+GKFADYVVYHELITTSRP+MRNVCAVQV+WV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEDGKFADYVVYHELITTSRPFMRNVCAVQVEWV 660

BLAST of Lsi08G016040 vs. NCBI nr
Match: XP_038884454.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [Benincasa hispida] >XP_038884455.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [Benincasa hispida] >XP_038884456.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [Benincasa hispida])

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 612/727 (84.18%), Postives = 625/727 (85.97%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVEQNQV+VIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVEQNQVIVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERT+IKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTQIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATL+GDKVSKFFFDCPVLTVPGK
Sbjct: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLEGDKVSKFFFDCPVLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYSNERPKSYIESCLKTAI                                   
Sbjct: 181 LYPVEILYSNERPKSYIESCLKTAIDIHTKEPEGDVLIFMTGQDDIEKLVSKLEEKVYNL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAVILPLHGSLPPELQVRVFSRPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           QTMA        ELPLEPSLSRTLIEANEYGCI+QALTVAAMLSAETTL+PGHRKNA+KK
Sbjct: 421 QTMA--------ELPLEPSLSRTLIEANEYGCISQALTVAAMLSAETTLLPGHRKNADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RKHRSLDLPDGSGWGDHIQLLQ FELWDQKNYD+NWCK+HDLQ                 
Sbjct: 481 RKHRSLDLPDGSGWGDHIQLLQSFELWDQKNYDINWCKEHDLQ----------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
           VRGMLFVKDVRKQLCQIMQKIAKGSLDVWS+RNQKESRAEYWNLRKALCVGYANQLAERM
Sbjct: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSYRNQKESRAEYWNLRKALCVGYANQLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV
Sbjct: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 660

BLAST of Lsi08G016040 vs. NCBI nr
Match: KAA0061018.1 (putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 609/727 (83.77%), Postives = 624/727 (85.83%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEELGV LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTDTLMGLMKRLIRMRNS+LKVLITSATLDGDKVSKFFFDCPVLTVPGK
Sbjct: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSHLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYSNERPKSYIESCLKTAI                                   
Sbjct: 181 LYPVEILYSNERPKSYIESCLKTAIDIHTKEPEGDVLIFLTGQDDIEKLVSKLEEKVYSL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAIILPLHGSLPPELQVRVFSCPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDIL+FDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           QTMA        ELPLEPSLSRTLIEANEYGCI+QALTV AMLSAETTL+PGHRKNA+KK
Sbjct: 421 QTMA--------ELPLEPSLSRTLIEANEYGCISQALTVVAMLSAETTLLPGHRKNADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RKHRSL+LPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASS              
Sbjct: 481 RKHRSLNLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASS-------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
             GMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKES+AEYWNLRKALCVGYAN+LAERM
Sbjct: 541 --GMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESQAEYWNLRKALCVGYANRLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDE+GKFADYVVYHELITTSRPYMRNVCAVQVDWV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEDGKFADYVVYHELITTSRPYMRNVCAVQVDWV 660

BLAST of Lsi08G016040 vs. NCBI nr
Match: XP_004143044.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [Cucumis sativus] >KGN62367.1 hypothetical protein Csa_018591 [Cucumis sativus])

HSP 1 Score: 1151.0 bits (2976), Expect = 0.0e+00
Identity = 605/727 (83.22%), Postives = 622/727 (85.56%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTDTLMGLMKRLIRMRNS+LKVLITSATLDGDKVSKFFFDCPVLTVPGK
Sbjct: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSHLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           LHPVEILYSNERPKSYIESCLKTAI                                   
Sbjct: 181 LHPVEILYSNERPKSYIESCLKTAIDIHTKEPEGDVLIFLTGQDDIEKLVSKLEEKVYSL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAIILPLHGSLPPELQVRVFSRPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           +TMA        ELPLEPSLSRTLIEANE+GCI+QALTV AMLSAETTL+PGHRK+A+KK
Sbjct: 421 KTMA--------ELPLEPSLSRTLIEANEFGCISQALTVVAMLSAETTLLPGHRKSADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RK+RSL+LPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQ                 
Sbjct: 481 RKNRSLNLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQ----------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
           VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQ+ES+AEYWNLRKALCVGYANQLAERM
Sbjct: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQRESQAEYWNLRKALCVGYANQLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRN+CAVQVDWV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNICAVQVDWV 660

BLAST of Lsi08G016040 vs. NCBI nr
Match: XP_008444435.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [Cucumis melo] >XP_008444436.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [Cucumis melo])

HSP 1 Score: 1146.3 bits (2964), Expect = 0.0e+00
Identity = 607/727 (83.49%), Postives = 622/727 (85.56%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVE+NQVVVIIGETGSGKSTQLSQML+RRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVERNQVVVIIGETGSGKSTQLSQMLYRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEELGV LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTDTLMGLMKRLIRMRNS+LKVLITSATLDGDKVSKFFFDCPVLTVPGK
Sbjct: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSHLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYSNERPKSYIESCLKTAI                                   
Sbjct: 181 LYPVEILYSNERPKSYIESCLKTAIDIHTKEPEGDVLIFLTGQDDIEKLVSKLEEKVYSL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAIILPLHGSLPPELQVRVFSCPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDIL+FDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           QTMA        ELPLEPSLSRTLIEANEYGCI+QALTV AMLSAETTL+PGHRKNA+KK
Sbjct: 421 QTMA--------ELPLEPSLSRTLIEANEYGCISQALTVVAMLSAETTLLPGHRKNADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RKHRSL+LPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQ                 
Sbjct: 481 RKHRSLNLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQ----------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
           VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKES+AEYWNLRKALCVGYANQLAERM
Sbjct: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESQAEYWNLRKALCVGYANQLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDE+GKFADYVVYHELITTSRPYMRNVCAVQVDWV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEDGKFADYVVYHELITTSRPYMRNVCAVQVDWV 660

BLAST of Lsi08G016040 vs. NCBI nr
Match: XP_022962409.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [Cucurbita moschata] >KAG7029250.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1127.9 bits (2916), Expect = 0.0e+00
Identity = 594/727 (81.71%), Postives = 615/727 (84.59%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MAQLPILQFEEKIIETVE+NQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV
Sbjct: 1   MAQLPILQFEEKIIETVEKNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVAEEL V LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV
Sbjct: 61  AAVSVARRVAEELDVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTD LMGLMKRLIRMR+SNLKVLITSATLDGDKVSKFFFDCP+LTVPGK
Sbjct: 121 IILDEAHERSLNTDILMGLMKRLIRMRSSNLKVLITSATLDGDKVSKFFFDCPLLTVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYSNERPKSY+ESCLKTAI                                   
Sbjct: 181 LYPVEILYSNERPKSYLESCLKTAIDIHTKEPEGDVLIFMTGQDDIEKLVSKLEEKVYNL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 ATNIAETSLTVDGVVYVIDSGY
Sbjct: 241 EEGSCMDAVVLPLHGSLPPELQVRVFSRPPPNCRRFIAATNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYR+YTSMDYQE+LLDVTVPE
Sbjct: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYTSMDYQEDLLDVTVPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSIT+IG
Sbjct: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITKIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           QTMA        ELPLEPSLSRTLIEANEYGCI+ ALTVAAMLSAETTL+PG RKNA+KK
Sbjct: 421 QTMA--------ELPLEPSLSRTLIEANEYGCISHALTVAAMLSAETTLLPGRRKNADKK 480

Query: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLT 540
           RKHRSLDLPDGSGWGDHIQLLQIFELWDQ+NYDVNWCKD +LQ                 
Sbjct: 481 RKHRSLDLPDGSGWGDHIQLLQIFELWDQENYDVNWCKDRELQ----------------- 540

Query: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERM 600
           VRGMLFVKDVRKQLCQIMQKIAKGSLDVW+ RNQKESRAEYWNLRKALCVGYANQLAERM
Sbjct: 541 VRGMLFVKDVRKQLCQIMQKIAKGSLDVWTSRNQKESRAEYWNLRKALCVGYANQLAERM 600

Query: 601 VHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDWV 655
           +HHNGYRTLSFKPQVVQVHPSSVMKPDE+GKFADYVVYHELITTSRP+MRNVCAVQV+WV
Sbjct: 601 IHHNGYRTLSFKPQVVQVHPSSVMKPDEDGKFADYVVYHELITTSRPFMRNVCAVQVEWV 660

BLAST of Lsi08G016040 vs. TAIR 10
Match: AT1G27900.1 (RNA helicase family protein )

HSP 1 Score: 860.1 bits (2221), Expect = 1.1e-249
Identity = 466/728 (64.01%), Postives = 538/728 (73.90%), Query Frame = 0

Query: 1   MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRV 60
           MA LPILQFEEKI+ETVE+N VVVIIGETGSGKSTQLSQ+LHR GYTKSG+I +TQPRRV
Sbjct: 1   MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRV 60

Query: 61  AAVSVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSV 120
           AAVSVARRVA+EL V LGE+VGYAIRFEDRT+ +TRIKYLTDGVLLRESLS+P L  YSV
Sbjct: 61  AAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSV 120

Query: 121 IILDEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGK 180
           IILDEAHERSLNTD L+GL+KRL+R+R SN KVLITSATLDG+KVS+FF  CPVL VPGK
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGK 180

Query: 181 LHPVEILYSNERPKSYIESCLKTAI----------------------------------- 240
           L+PVEILYS ERP SYIES LK AI                                   
Sbjct: 181 LYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSL 240

Query: 241 --------------------------------------ATNIAETSLTVDGVVYVIDSGY 300
                                                 +TNIAETSLTVDGVVYVIDSGY
Sbjct: 241 AEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGY 300

Query: 301 VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPE 360
           VKQRQYNPS+GM+SLDV+QISKVQANQRAGRAGRTRPGKCYR+Y    Y+++ LD T+PE
Sbjct: 301 VKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPE 360

Query: 361 IQRSSLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIG 420
           IQR+SLAGSVLYLKSLDLPDIDIL+FDFLD P+SESLEDALKQLY IDAIDENG+ITRIG
Sbjct: 361 IQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIG 420

Query: 421 QTMAAESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKK 480
           +TM+        +LPLEPSLSRTLIEANE GC++QALTV AMLSAETTL+P   K +EKK
Sbjct: 421 RTMS--------DLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKK 480

Query: 481 RKH-RSLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVL 540
           RKH    +LP+GSG+GDHIQLLQIFE WD+ NYD  WCK++ +Q                
Sbjct: 481 RKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQ---------------- 540

Query: 541 TVRGMLFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAER 600
            VRGM+FVKDVR+QLCQIMQKI+K  L+V +   +  SR +Y  LRKALCVG ANQ+AER
Sbjct: 541 -VRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAER 600

Query: 601 MVHHNGYRTLSFKPQVVQVHPSSVMKPDEEGKFADYVVYHELITTSRPYMRNVCAVQVDW 655
           M+ HNGYRTLSF+ Q+VQVHPSSV+  D +G   +YVVYHELI+T+RP+MRNVCAV + W
Sbjct: 601 MLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAW 660

BLAST of Lsi08G016040 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 448.7 bits (1153), Expect = 7.8e-126
Identity = 261/659 (39.61%), Postives = 371/659 (56.30%), Query Frame = 0

Query: 4    LPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAV 63
            LPI + ++++I+ V  NQV+V+IGETGSGK+TQ++Q L   GYT  G IG TQPRRVAA+
Sbjct: 515  LPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAM 574

Query: 64   SVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIIL 123
            SVA+RVAEE G  LGEEVGYAIRFED T   T IKY+TDG+LLRE L D  L QYSVI+L
Sbjct: 575  SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 634

Query: 124  DEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHP 183
            DEAHER+++TD L GL+K+L++ R  +L++++TSATLD +K S +FF+C + T+PG+  P
Sbjct: 635  DEAHERTIHTDVLFGLLKKLMK-RRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFP 694

Query: 184  VEILYSNERPKSYIESCL------------------------------------------ 243
            VEILY+ +    Y+++ L                                          
Sbjct: 695  VEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKN 754

Query: 244  ------------------------------KTAIATNIAETSLTVDGVVYVIDSGYVKQR 303
                                          K  +ATNIAE SLT+DG+ YV+D G+ KQ 
Sbjct: 755  VPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQN 814

Query: 304  QYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQRS 363
             YNP  G+ SL +  IS+  A QRAGRAGRT PGKCYR+YT   Y+ E+   ++PEIQR 
Sbjct: 815  VYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRI 874

Query: 364  SLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTMA 423
            +L  + L +K++ +   D+L FDF+DPP  ++L  A++QLY + A+DE G +T++G+ MA
Sbjct: 875  NLGMTTLTMKAMGIN--DLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMA 934

Query: 424  AESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKKRKHR 483
                    E PLEP LS+ L+ + + GC  + LT+ AM+           K A+  +K  
Sbjct: 935  --------EFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRA 994

Query: 484  SLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTVRGM 543
                P+    GDH+ LL ++E W  KN+   WC ++ +Q+                 R +
Sbjct: 995  KFFQPE----GDHLTLLAVYEAWKAKNFSGPWCFENFIQS-----------------RSL 1054

Query: 544  LFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERMVHHN 591
               +DVRKQL  IM K     LDV +      +   +  +RKA+  G+    A R     
Sbjct: 1055 RRAQDVRKQLLSIMDKY---KLDVVT------AGKNFTKIRKAITAGFFFHGA-RKDPQE 1114

BLAST of Lsi08G016040 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 442.2 bits (1136), Expect = 7.3e-124
Identity = 251/659 (38.09%), Postives = 387/659 (58.73%), Query Frame = 0

Query: 4    LPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAV 63
            LPI  + +++++ VE++QV+VI+G+TGSGK+TQ+ Q LH  GYTK G +G TQPRRVAA+
Sbjct: 404  LPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAM 463

Query: 64   SVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIIL 123
            SVA RVA+E+GV LG EVGY+IRFED TS++T +KY+TDG+LLRE L +P+L  YSV+I+
Sbjct: 464  SVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIV 523

Query: 124  DEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHP 183
            DEAHER+L+TD L GL+K + R R  +LK+LI+SAT+D +K S +F   P+ + PG+ +P
Sbjct: 524  DEAHERTLSTDILFGLVKDIARFR-PDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYP 583

Query: 184  VEILYSNERPKSYIESCL------------------------------------------ 243
            VEI Y++     Y+++ +                                          
Sbjct: 584  VEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTK 643

Query: 244  ------------------------------KTAIATNIAETSLTVDGVVYVIDSGYVKQR 303
                                          K  +ATNIAETSLT+DG+ YV+D G+ K +
Sbjct: 644  IRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMK 703

Query: 304  QYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQRS 363
             YNP TGM SL +  ISK  A QRAGRAGRT PGKCYR+YT+ +Y  +L + TVPE+QR+
Sbjct: 704  SYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRT 763

Query: 364  SLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTMA 423
            +LA  VL LKSL +   D++ FDF+DPP +E+L  +L+ L+ + A+++ G +T+ G+ MA
Sbjct: 764  NLASVVLALKSLGIH--DLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMA 823

Query: 424  AESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKKRKHR 483
                    E PL+P LS+ ++ +++Y C  + +++AAMLS   ++     K+ +    + 
Sbjct: 824  --------EFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIF-YRPKDKQVHADNA 883

Query: 484  SLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTVRGM 543
             ++   G+  GDHI LL+++  W + N+   WC ++ +Q                 VR M
Sbjct: 884  RMNFHTGN-VGDHIALLKVYSSWKETNFSTQWCYENYIQ-----------------VRSM 943

Query: 544  LFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERMVHHN 591
               +D+R QL  +++++    +D+ S  N+ +S      +RK++  G+    A ++  + 
Sbjct: 944  KRARDIRDQLEGLLERV---EIDISSNLNELDS------VRKSIVAGFFPHTA-KLQKNG 1003

BLAST of Lsi08G016040 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 442.2 bits (1136), Expect = 7.3e-124
Identity = 251/659 (38.09%), Postives = 387/659 (58.73%), Query Frame = 0

Query: 4    LPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAV 63
            LPI  + +++++ VE++QV+VI+G+TGSGK+TQ+ Q LH  GYTK G +G TQPRRVAA+
Sbjct: 394  LPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAM 453

Query: 64   SVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIIL 123
            SVA RVA+E+GV LG EVGY+IRFED TS++T +KY+TDG+LLRE L +P+L  YSV+I+
Sbjct: 454  SVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIV 513

Query: 124  DEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHP 183
            DEAHER+L+TD L GL+K + R R  +LK+LI+SAT+D +K S +F   P+ + PG+ +P
Sbjct: 514  DEAHERTLSTDILFGLVKDIARFR-PDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYP 573

Query: 184  VEILYSNERPKSYIESCL------------------------------------------ 243
            VEI Y++     Y+++ +                                          
Sbjct: 574  VEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTK 633

Query: 244  ------------------------------KTAIATNIAETSLTVDGVVYVIDSGYVKQR 303
                                          K  +ATNIAETSLT+DG+ YV+D G+ K +
Sbjct: 634  IRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMK 693

Query: 304  QYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQRS 363
             YNP TGM SL +  ISK  A QRAGRAGRT PGKCYR+YT+ +Y  +L + TVPE+QR+
Sbjct: 694  SYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRT 753

Query: 364  SLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTMA 423
            +LA  VL LKSL +   D++ FDF+DPP +E+L  +L+ L+ + A+++ G +T+ G+ MA
Sbjct: 754  NLASVVLALKSLGIH--DLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMA 813

Query: 424  AESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKKRKHR 483
                    E PL+P LS+ ++ +++Y C  + +++AAMLS   ++     K+ +    + 
Sbjct: 814  --------EFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIF-YRPKDKQVHADNA 873

Query: 484  SLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTVRGM 543
             ++   G+  GDHI LL+++  W + N+   WC ++ +Q                 VR M
Sbjct: 874  RMNFHTGN-VGDHIALLKVYSSWKETNFSTQWCYENYIQ-----------------VRSM 933

Query: 544  LFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERMVHHN 591
               +D+R QL  +++++    +D+ S  N+ +S      +RK++  G+    A ++  + 
Sbjct: 934  KRARDIRDQLEGLLERV---EIDISSNLNELDS------VRKSIVAGFFPHTA-KLQKNG 993

BLAST of Lsi08G016040 vs. TAIR 10
Match: AT2G35340.1 (helicase domain-containing protein )

HSP 1 Score: 441.0 bits (1133), Expect = 1.6e-123
Identity = 255/659 (38.69%), Postives = 378/659 (57.36%), Query Frame = 0

Query: 4    LPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAV 63
            LPI  + ++++  V+ +QV++I+GETGSGK+TQ+ Q LH  GYTK G +G TQPRRVAA+
Sbjct: 404  LPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAM 463

Query: 64   SVARRVAEELGVHLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIIL 123
            SVA RVA+E+G  LG EVGY+IRFED TSE+T +KY+TDG+LLRE L +P+LG YSVII+
Sbjct: 464  SVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIV 523

Query: 124  DEAHERSLNTDTLMGLMKRLIRMRNSNLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHP 183
            DEAHER+L TD L GL+K + R R  +LK+LI+SAT+D +K S FF   P+   PG+ +P
Sbjct: 524  DEAHERTLRTDILFGLVKDIARAR-PDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYP 583

Query: 184  VEILYSNERPKSYIESCL------------------------------------------ 243
            V+I ++      Y+++ +                                          
Sbjct: 584  VDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTK 643

Query: 244  ------------------------------KTAIATNIAETSLTVDGVVYVIDSGYVKQR 303
                                          K  +ATNIAETSLT+DG+ YV+D G+ K +
Sbjct: 644  IRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMK 703

Query: 304  QYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRMYTSMDYQEELLDVTVPEIQRS 363
             YNP TGM SL V  ISK  A QR GRAGRT PGKCYR+YT+ +Y  +L D TVPEIQR+
Sbjct: 704  SYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRT 763

Query: 364  SLAGSVLYLKSLDLPDIDILRFDFLDPPTSESLEDALKQLYLIDAIDENGSITRIGQTMA 423
            +LA  VL LKSL +   ++L FDF+DPP SE+L  +L+ L+ + A+++ G +T+ G+ MA
Sbjct: 764  NLASVVLSLKSLGIH--NLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMA 823

Query: 424  AESQSCDLELPLEPSLSRTLIEANEYGCITQALTVAAMLSAETTLIPGHRKNAEKKRKHR 483
                    E PL+P LS+ ++ +++Y C  + +++AAMLS   ++   +R   ++     
Sbjct: 824  --------EFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIF--YRPKDKQVHADN 883

Query: 484  SLDLPDGSGWGDHIQLLQIFELWDQKNYDVNWCKDHDLQASSSILILKSYSCLVLTVRGM 543
            ++        GDHI  L+I+  W + NY   WC ++ +Q                 VR M
Sbjct: 884  AMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQ-----------------VRSM 943

Query: 544  LFVKDVRKQLCQIMQKIAKGSLDVWSFRNQKESRAEYWNLRKALCVGYANQLAERMVHHN 591
               +D+R QL  +++++    +DV S  N+ +S      +RK++  G+    A ++  + 
Sbjct: 944  KRARDIRDQLEGLLERV---EIDVSSNANELDS------IRKSIVAGFFPHTA-KLQKNG 1003

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q93Y161.6e-24864.01Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 OS=Arabidopsi... [more]
O426431.2e-12639.49Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces... [more]
Q145629.9e-12639.85ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1[more]
A2A4P09.9e-12639.85ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1[more]
Q54F053.8e-12539.91ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=... [more]
Match NameE-valueIdentityDescription
A0A5A7V0E00.0e+0083.77Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 OS... [more]
A0A0A0LNH60.0e+0083.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G350990 PE=4 SV=1[more]
A0A1S3BAD90.0e+0083.49probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 OS... [more]
A0A6J1HH010.0e+0081.71probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 OS... [more]
A0A6J1K9J40.0e+0081.57probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 OS... [more]
Match NameE-valueIdentityDescription
XP_038884454.10.0e+0084.18probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [B... [more]
KAA0061018.10.0e+0083.77putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [C... [more]
XP_004143044.10.0e+0083.22probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [C... [more]
XP_008444435.10.0e+0083.49PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 is... [more]
XP_022962409.10.0e+0081.71probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [C... [more]
Match NameE-valueIdentityDescription
AT1G27900.11.1e-24964.01RNA helicase family protein [more]
AT3G26560.17.8e-12639.61ATP-dependent RNA helicase, putative [more]
AT1G32490.17.3e-12438.09RNA helicase family protein [more]
AT1G32490.27.3e-12438.09RNA helicase family protein [more]
AT2G35340.11.6e-12338.69helicase domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 2..187
e-value: 8.3E-30
score: 115.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 14..178
score: 19.097672
IPR007502Helicase-associated domainSMARTSM00847ha2_5coord: 326..428
e-value: 8.3E-16
score: 68.5
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 327..410
e-value: 4.8E-15
score: 55.8
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 19..180
e-value: 0.0018
score: 27.6
NoneNo IPR availableGENE3D1.20.120.1080coord: 312..492
e-value: 1.7E-19
score: 71.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 610..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 610..636
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 3..203
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 202..590
NoneNo IPR availablePANTHERPTHR18934:SF120OS06G0343100 PROTEINcoord: 3..203
NoneNo IPR availablePANTHERPTHR18934:SF120OS06G0343100 PROTEINcoord: 202..590
NoneNo IPR availableCDDcd18791SF2_C_RHAcoord: 205..271
e-value: 1.04436E-39
score: 141.517
IPR011709Domain of unknown function DUF1605PFAMPF07717OB_NTP_bindcoord: 511..592
e-value: 1.5E-17
score: 63.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..178
e-value: 2.3E-80
score: 271.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 179..279
e-value: 5.5E-27
score: 95.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..450
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 11..167
e-value: 1.1E-8
score: 35.0
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 119..128
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 105..304
score: 11.08156

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G016040.1Lsi08G016040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005681 spliceosomal complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding