Lsi08G015880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G015880
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Glutaredoxin
Location	chr08: 23881029 .. 23881430 (-)
RNA-Seq Expression	Lsi08G015880
Synteny	Lsi08G015880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGGTTGCGCAAACGACGTCGTATCCTCTGAATTTCCTCCTTCTCCGACCTCCTCCTCCTCCCTATCCATCGACGTTGATGAATCGTCGGAAACTCGGATCCGGCGGCTGATTGCAGAGCATCCGGTGATCATATTCAGCCGCTCCTCTTGCAGCATGTGCCACGTCATGAAAACTCTCCTTGCCATCATCGGCGTCCATCCCACCGTCATCGAACTTGACGATCACGACGAAATCGCCGCTGTTCCTTCTTCTTCTTTTGCTCGGGACAGTTCGGCGCCGGCTGTTTTCATCGGCGGGGCTAGCTTCGGCGGCTTGGAATCTCTCGTTGCTCTCCATCTTAGCGGCCATCTTGTTCCTAAACTTATCGAAGTTGGAGCTCTCCCGGTATGCCTCTAG

mRNA sequence

ATGCACGGTTGCGCAAACGACGTCGTATCCTCTGAATTTCCTCCTTCTCCGACCTCCTCCTCCTCCCTATCCATCGACGTTGATGAATCGTCGGAAACTCGGATCCGGCGGCTGATTGCAGAGCATCCGGTGATCATATTCAGCCGCTCCTCTTGCAGCATGTGCCACGTCATGAAAACTCTCCTTGCCATCATCGGCGTCCATCCCACCGTCATCGAACTTGACGATCACGACGAAATCGCCGCTGTTCCTTCTTCTTCTTTTGCTCGGGACAGTTCGGCGCCGGCTGTTTTCATCGGCGGGGCTAGCTTCGGCGGCTTGGAATCTCTCGTTGCTCTCCATCTTAGCGGCCATCTTGTTCCTAAACTTATCGAAGTTGGAGCTCTCCCGGTATGCCTCTAG

Coding sequence (CDS)

ATGCACGGTTGCGCAAACGACGTCGTATCCTCTGAATTTCCTCCTTCTCCGACCTCCTCCTCCTCCCTATCCATCGACGTTGATGAATCGTCGGAAACTCGGATCCGGCGGCTGATTGCAGAGCATCCGGTGATCATATTCAGCCGCTCCTCTTGCAGCATGTGCCACGTCATGAAAACTCTCCTTGCCATCATCGGCGTCCATCCCACCGTCATCGAACTTGACGATCACGACGAAATCGCCGCTGTTCCTTCTTCTTCTTTTGCTCGGGACAGTTCGGCGCCGGCTGTTTTCATCGGCGGGGCTAGCTTCGGCGGCTTGGAATCTCTCGTTGCTCTCCATCTTAGCGGCCATCTTGTTCCTAAACTTATCGAAGTTGGAGCTCTCCCGGTATGCCTCTAG

Protein sequence

MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGALPVCL

Homology

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BLAST of Lsi08G015880 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 8.1e-35
Identity = 87/133 (65.41%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 5   ANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLA 64
           +NDVV  +  PPS TSS+SLSID +ES+E +IRRLI+EHPVIIFSRSSC MCHVMK LLA
Sbjct: 11  SNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLA 70

Query: 65  IIGVHPTVIELDDHDEIAAVP-------SSSFARDSSAPAVFIGGASFGGLESLVALHLS 124
            IGV PTVIELDDH E++++P       S   +     PAVFIG    GGLESLVALHLS
Sbjct: 71  TIGVIPTVIELDDH-EVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLS 130

Query: 125 GHLVPKLIEVGAL 130
           G LVPKL++VGAL
Sbjct: 131 GQLVPKLVQVGAL 142

[Close]

BLAST of Lsi08G015880 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.9e-30
Identity = 78/147 (53.06%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 1   MHGCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHP 60
           +  C+ND V+ +            PP+P      T+S+SLS D +E+SE++I RLI+EHP
Sbjct: 7   LRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHP 66

Query: 61  VIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGA 120
           VIIF+R SSC MCHVMK LL+ +GVHPTVIE+DD  EIA      +    +AP +FIGG 
Sbjct: 67  VIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDD-GEIA------YLAVEAAPVLFIGGT 126

Query: 121 SFGGLESLVALHLSGHLVPKLIEVGAL 130
             GG ESLVALHLSG L+P+L+EVGAL
Sbjct: 127 CVGGFESLVALHLSGQLIPRLVEVGAL 146

[Close]

BLAST of Lsi08G015880 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-22
Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 29  ESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSF 88
           E    RI RL+ E PV+IF+R  C MCHVM+ LLA +G H TVIELD+  E AA   +S 
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAA---ASA 98

Query: 89  ARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL 130
           A  ++ PA+F+GGA  GGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  AAAAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of Lsi08G015880 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 53/111 (47.75%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 22  SLSID---VDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHD 81
           SL+ID    +E+   R+ RL+ E PV++F+R  C M HVM+ LLA +G H TVIEL+   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELE--G 74

Query: 82  EIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL 130
             A    ++    ++ PA+F+GG   GGLE L+ LHLSG LVP+L EVGAL
Sbjct: 75  GAAEEEEAALGGGAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]

BLAST of Lsi08G015880 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-15
Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 34  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH---DEIAAVPSSSFAR 93
           R+ RL A+  V+IFS SSC MCH +  L   +GV+PTV+ELD+     E+    +    R
Sbjct: 3   RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGR 62

Query: 94  DSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL 130
             + PAVFIGG   G  + +++LHLSG+LVP L   GAL
Sbjct: 63  SPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGAL 101

[Close]

BLAST of Lsi08G015880 vs. ExPASy TrEMBL
Match: A0A5A7UYF1 (Glutaredoxin-C6-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001380 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.4e-59
Identity = 124/133 (93.23%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           M    ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSPTSSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIGGASFGGLESLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALPVCL 134
           PKLIEVGALPVCL
Sbjct: 121 PKLIEVGALPVCL 133

[Close]

BLAST of Lsi08G015880 vs. ExPASy TrEMBL
Match: A0A0A0LN11 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G351650 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.2e-58
Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           MH   ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI +HPVIIFSRSSCSMCHVMKT
Sbjct: 1   MHRSTNDAVSFEFPPSPTSSSSLSIDVDESSETRIRRLITDHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIGGASFGGLESLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALPV 132
           PKLIEVGALPV
Sbjct: 121 PKLIEVGALPV 131

[Close]

BLAST of Lsi08G015880 vs. ExPASy TrEMBL
Match: A0A1S3BAG0 (glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.6e-57
Identity = 122/131 (93.13%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           M    ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSPTSSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIGGASFGGLESLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALPV 132
           PKLIEVGALPV
Sbjct: 121 PKLIEVGALPV 131

[Close]

BLAST of Lsi08G015880 vs. ExPASy TrEMBL
Match: A0A6J1KE42 (glutaredoxin-C6-like OS=Cucurbita maxima OX=3661 GN=LOC111492406 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.1e-57
Identity = 122/131 (93.13%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           M+ CANDVVSSE PPSPTSSSSLSIDVDESSE RIRRLI EHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIEL+DHDEIAAVPSSSF RDSSAPAVFIGGASFGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 121 PKLIEVGALPV 132
           PKLIEVGAL V
Sbjct: 121 PKLIEVGALAV 131

[Close]

BLAST of Lsi08G015880 vs. ExPASy TrEMBL
Match: A0A6J1HEU7 (glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111462402 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57
Identity = 122/131 (93.13%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           M+ CANDVVSSE PPSPTSSSSLSIDVDESSE RIRRLI EHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIEL+DHDEIAAVPSSSF RDSSAPAVFIGGASFGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFIRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 121 PKLIEVGALPV 132
           PKLIEVGAL V
Sbjct: 121 PKLIEVGALTV 131

[Close]

BLAST of Lsi08G015880 vs. NCBI nr
Match: XP_038885533.1 (glutaredoxin-C6-like isoform X1 [Benincasa hispida])

HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60
Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           MH C NDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSR+SCSMCHVMKT
Sbjct: 1   MHRCPNDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRTSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIELDDHDEIAAVPSSSF RDSSAPAVFIGGASFGGLESLVALHLSGHL+
Sbjct: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLI 120

Query: 121 PKLIEVGALPV 132
           PKLIEVGALPV
Sbjct: 121 PKLIEVGALPV 131

[Close]

BLAST of Lsi08G015880 vs. NCBI nr
Match: XP_038885534.1 (glutaredoxin-C6-like isoform X2 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.4e-60
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           MH C NDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSR+SCSMCHVMKT
Sbjct: 1   MHRCPNDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRTSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIELDDHDEIAAVPSSSF RDSSAPAVFIGGASFGGLESLVALHLSGHL+
Sbjct: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLI 120

Query: 121 PKLIEVGALP 131
           PKLIEVGALP
Sbjct: 121 PKLIEVGALP 130

[Close]

BLAST of Lsi08G015880 vs. NCBI nr
Match: KAA0061003.1 (glutaredoxin-C6-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58
Identity = 124/133 (93.23%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           M    ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSPTSSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIGGASFGGLESLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALPVCL 134
           PKLIEVGALPVCL
Sbjct: 121 PKLIEVGALPVCL 133

[Close]

BLAST of Lsi08G015880 vs. NCBI nr
Match: XP_004142929.1 (glutaredoxin-C6 [Cucumis sativus] >KGN62384.1 hypothetical protein Csa_018651 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 8.6e-58
Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           MH   ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI +HPVIIFSRSSCSMCHVMKT
Sbjct: 1   MHRSTNDAVSFEFPPSPTSSSSLSIDVDESSETRIRRLITDHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIGGASFGGLESLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALPV 132
           PKLIEVGALPV
Sbjct: 121 PKLIEVGALPV 131

[Close]

BLAST of Lsi08G015880 vs. NCBI nr
Match: XP_008444458.1 (PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 3.3e-57
Identity = 122/131 (93.13%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKT 60
           M    ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSPTSSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLV 120
           LLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIGGASFGGLESLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALPV 132
           PKLIEVGALPV
Sbjct: 121 PKLIEVGALPV 131

[Close]

BLAST of Lsi08G015880 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 5.8e-36
Identity = 87/133 (65.41%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 5   ANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLA 64
           +NDVV  +  PPS TSS+SLSID +ES+E +IRRLI+EHPVIIFSRSSC MCHVMK LLA
Sbjct: 11  SNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLA 70

Query: 65  IIGVHPTVIELDDHDEIAAVP-------SSSFARDSSAPAVFIGGASFGGLESLVALHLS 124
            IGV PTVIELDDH E++++P       S   +     PAVFIG    GGLESLVALHLS
Sbjct: 71  TIGVIPTVIELDDH-EVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLS 130

Query: 125 GHLVPKLIEVGAL 130
           G LVPKL++VGAL
Sbjct: 131 GQLVPKLVQVGAL 142

[Close]

BLAST of Lsi08G015880 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 5.6e-31
Identity = 78/147 (53.06%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 1   MHGCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHP 60
           +  C+ND V+ +            PP+P      T+S+SLS D +E+SE++I RLI+EHP
Sbjct: 7   LRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHP 66

Query: 61  VIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGA 120
           VIIF+R SSC MCHVMK LL+ +GVHPTVIE+DD  EIA      +    +AP +FIGG 
Sbjct: 67  VIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDD-GEIA------YLAVEAAPVLFIGGT 126

Query: 121 SFGGLESLVALHLSGHLVPKLIEVGAL 130
             GG ESLVALHLSG L+P+L+EVGAL
Sbjct: 127 CVGGFESLVALHLSGQLIPRLVEVGAL 146

[Close]

BLAST of Lsi08G015880 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 23  LSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH----- 82
           LS+    + E R+R ++ E+ VI+  R  C MCHV++ LL  +GV+P V+E+D+      
Sbjct: 24  LSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEV 83

Query: 83  -DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL 130
             E+  +           PAV++GG  FGGL+ ++A H+SG LVP L EVGAL
Sbjct: 84  LSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGAL 135

[Close]

BLAST of Lsi08G015880 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 8.1e-14
Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 35  IRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSS- 94
           I +++ E PV+I+S+SSC M H +KTLL   G +P V ELD+      +  +      S 
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSP 63

Query: 95  -APAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL 130
             P VFIGG   GG   +++LHL+G L+P L   GAL
Sbjct: 64  AVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGAL 100

[Close]

BLAST of Lsi08G015880 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13
Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 34  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPS--SSFARD 93
           +++++I+E  V+IFS++SC M H +KTL    GV+PT+ ELD+ +    +    +     
Sbjct: 3   KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCS 62

Query: 94  SSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL 130
            + P VFIGG   GG   +++LHL+  LVP L  VGAL
Sbjct: 63  PTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGAL 100

The following BLAST results are available for this feature:

BLAST of Lsi08G015880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	8.1e-35	65.41	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	7.9e-30	53.06	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	3.5e-22	56.44	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q5SMY5	1.8e-18	47.75	Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2...	[more]
Q7G8Y5	1.9e-15	45.45	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of Lsi08G015880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UYF1	6.4e-59	93.23	Glutaredoxin-C6-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0LN11	4.2e-58	93.13	Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G351650 PE=3 SV=1	[more]
A0A1S3BAG0	1.6e-57	93.13	glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=3 SV=...	[more]
A0A6J1KE42	2.1e-57	93.13	glutaredoxin-C6-like OS=Cucurbita maxima OX=3661 GN=LOC111492406 PE=3 SV=1	[more]
A0A6J1HEU7	2.7e-57	93.13	glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111462402 PE=3 SV=1	[more]

BLAST of Lsi08G015880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885533.1	1.1e-60	96.18	glutaredoxin-C6-like isoform X1 [Benincasa hispida]	[more]
XP_038885534.1	2.4e-60	96.15	glutaredoxin-C6-like isoform X2 [Benincasa hispida]	[more]
KAA0061003.1	1.3e-58	93.23	glutaredoxin-C6-like isoform X2 [Cucumis melo var. makuwa]	[more]
XP_004142929.1	8.6e-58	93.13	glutaredoxin-C6 [Cucumis sativus] >KGN62384.1 hypothetical protein Csa_018651 [C...	[more]
XP_008444458.1	3.3e-57	93.13	PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo]	[more]

BLAST of Lsi08G015880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	5.8e-36	65.41	Thioredoxin superfamily protein	[more]
AT5G11930.1	5.6e-31	53.06	Thioredoxin superfamily protein	[more]
AT1G28480.1	1.5e-15	39.82	Thioredoxin superfamily protein	[more]
AT5G18600.1	8.1e-14	41.24	Thioredoxin superfamily protein	[more]
AT4G15680.1	1.8e-13	39.80	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 87..100 score: 25.89 coord: 101..114 score: 31.85 coord: 44..62 score: 35.09
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 25..131 e-value: 7.7E-24 score: 85.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..27
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 7..129
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 32..130 score: 18.832247
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 43..122 e-value: 2.01732E-25 score: 89.9064
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 44..101 e-value: 1.9E-7 score: 31.2
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 35..129 e-value: 7.4E-32 score: 107.3
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 7..129
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 32..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G015880.1	Lsi08G015880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity