Lsi08G015360 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G015360
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Glutamic acid-rich protein
Location	chr08: 23371898 .. 23372701 (+)
RNA-Seq Expression	Lsi08G015360
Synteny	Lsi08G015360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGGTGGGGACAGACTCCATCCCAGCCCTCCAACTATGTCAGTATTCTTCATCTTCGAGAACGGTGGCTCAAAGAAAATGAGCCAAACCAGAAAGAGAAGGAAGATTTGAAACAGCTTGACCAACAAGAACAGCAACAGAAGGTTCTGCGGACGGAACCTAAGGAGAAGGATGATCAGAAGCCGGTGGTTCAAAAACCTCGAAGCAATGCTTCTTCTTGGAGCAGAAATGGGAGTGGGAATTTTCAGAGGTATTATCGAGCTGTACCGGCGAGTAATCCGCGCAATGTGAACGAGACGTGCAAGAAGACTGAGAATAAAGGCGAGCCTCAGCTGGCTGTTCCTCAAATCGAGCGAGATGAGAAGAAGGAAAAGAACTCTAAAAGGAAGGGTCCCAAGAAGAACCCTAGATTACAGAAGGATGAGATGGATAAAACGTCACCAACACCTGAGGAGAACTTGAAGGAGGAAATGCGAGAGACGGAATGCGAGGTTAAGGTGCAGAACCGGAAGAAAAATATGAGGGCAAGAAAAATCGATGAAAAGAAGGGGACTGGGAGTCAATGTGGACCTGAAAAAACTGGCTACACGCATAAGATGAAGGAGATGGAAAACAAATTAAGTCTTATTTCAGTGAGTTTTGAAATTAAAAGAGGGAGGAATAATGGTGTTTACAGAGGCAGTAGTCAAGGCAATCGGAATTCCAGAGATCATCGGAATCTTGATCGTTGGGGTCCCCGTAAACAGAGGGATGTTGGAATGATTTGGGTGAGGAAGGACGAGCTTTCAAAAGTTGCATAG

mRNA sequence

ATGCAAGGGTGGGGACAGACTCCATCCCAGCCCTCCAACTATGTCAGTATTCTTCATCTTCGAGAACGGTGGCTCAAAGAAAATGAGCCAAACCAGAAAGAGAAGGAAGATTTGAAACAGCTTGACCAACAAGAACAGCAACAGAAGGTTCTGCGGACGGAACCTAAGGAGAAGGATGATCAGAAGCCGGTGGTTCAAAAACCTCGAAGCAATGCTTCTTCTTGGAGCAGAAATGGGAGTGGGAATTTTCAGAGGTATTATCGAGCTGTACCGGCGAGTAATCCGCGCAATGTGAACGAGACGTGCAAGAAGACTGAGAATAAAGGCGAGCCTCAGCTGGCTGTTCCTCAAATCGAGCGAGATGAGAAGAAGGAAAAGAACTCTAAAAGGAAGGGTCCCAAGAAGAACCCTAGATTACAGAAGGATGAGATGGATAAAACGTCACCAACACCTGAGGAGAACTTGAAGGAGGAAATGCGAGAGACGGAATGCGAGGTTAAGGTGCAGAACCGGAAGAAAAATATGAGGGCAAGAAAAATCGATGAAAAGAAGGGGACTGGGAGTCAATGTGGACCTGAAAAAACTGGCTACACGCATAAGATGAAGGAGATGGAAAACAAATTAAGTCTTATTTCAGTGAGTTTTGAAATTAAAAGAGGGAGGAATAATGGTGTTTACAGAGGCAGTAGTCAAGGCAATCGGAATTCCAGAGATCATCGGAATCTTGATCGTTGGGGTCCCCGTAAACAGAGGGATGTTGGAATGATTTGGGTGAGGAAGGACGAGCTTTCAAAAGTTGCATAG

Coding sequence (CDS)

ATGCAAGGGTGGGGACAGACTCCATCCCAGCCCTCCAACTATGTCAGTATTCTTCATCTTCGAGAACGGTGGCTCAAAGAAAATGAGCCAAACCAGAAAGAGAAGGAAGATTTGAAACAGCTTGACCAACAAGAACAGCAACAGAAGGTTCTGCGGACGGAACCTAAGGAGAAGGATGATCAGAAGCCGGTGGTTCAAAAACCTCGAAGCAATGCTTCTTCTTGGAGCAGAAATGGGAGTGGGAATTTTCAGAGGTATTATCGAGCTGTACCGGCGAGTAATCCGCGCAATGTGAACGAGACGTGCAAGAAGACTGAGAATAAAGGCGAGCCTCAGCTGGCTGTTCCTCAAATCGAGCGAGATGAGAAGAAGGAAAAGAACTCTAAAAGGAAGGGTCCCAAGAAGAACCCTAGATTACAGAAGGATGAGATGGATAAAACGTCACCAACACCTGAGGAGAACTTGAAGGAGGAAATGCGAGAGACGGAATGCGAGGTTAAGGTGCAGAACCGGAAGAAAAATATGAGGGCAAGAAAAATCGATGAAAAGAAGGGGACTGGGAGTCAATGTGGACCTGAAAAAACTGGCTACACGCATAAGATGAAGGAGATGGAAAACAAATTAAGTCTTATTTCAGTGAGTTTTGAAATTAAAAGAGGGAGGAATAATGGTGTTTACAGAGGCAGTAGTCAAGGCAATCGGAATTCCAGAGATCATCGGAATCTTGATCGTTGGGGTCCCCGTAAACAGAGGGATGTTGGAATGATTTGGGTGAGGAAGGACGAGCTTTCAAAAGTTGCATAG

Protein sequence

MQGWGQTPSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEKDDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQIERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRARKIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRGSSQGNRNSRDHRNLDRWGPRKQRDVGMIWVRKDELSKVA

Homology

[Close]

BLAST of Lsi08G015360 vs. ExPASy TrEMBL
Match: A0A5A7V598 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00950 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 9.1e-97
Identity = 206/270 (76.30%), Postives = 227/270 (84.07%), Query Frame = 0


Query: 1   MQGWGQT--PSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEK 60
           M+ WG+T  PS+PSNYV+IL LRERWLKENE   KEKEDLKQL+ +E+QQKV RTEP++K
Sbjct: 1   MEEWGRTRIPSRPSNYVTILDLRERWLKENEREHKEKEDLKQLELEERQQKVPRTEPEKK 60

Query: 61  DDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQI 120
           DDQKPVV+KPR NASSWSRNG    + YYRAVP SNP+NVNETCKK E++ EP+L VP I
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGREKVRMYYRAVPVSNPQNVNETCKKIEDEREPELPVPPI 120

Query: 121 ERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRAR 180
           ERD+KKEK    KG KK  R QK +MDKTSPTPEENLKEE+ E ECEV VQNRKKN+RAR
Sbjct: 121 ERDKKKEK----KGRKKKRRAQKGKMDKTSPTPEENLKEEVWEKECEVGVQNRKKNVRAR 180

Query: 181 KIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRG-SSQGNRNSR 240
           KIDEKKGTGSQ GPEKTGY H+MKEMENKLSLISVS EIKRG NNGV RG SSQGNRN R
Sbjct: 181 KIDEKKGTGSQRGPEKTGYAHEMKEMENKLSLISVSLEIKRGTNNGVDRGSSSQGNRNFR 240

Query: 241 DHRNLDRWGPRKQRDVGMIWVRKDELSKVA 268
            HRNLDR GPRKQ+DV MIWVRKDELSK A
Sbjct: 241 YHRNLDRRGPRKQKDVKMIWVRKDELSKGA 266

[Close]

BLAST of Lsi08G015360 vs. ExPASy TrEMBL
Match: A0A1S3BBD2 (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103487826 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.8e-95
Identity = 204/270 (75.56%), Postives = 225/270 (83.33%), Query Frame = 0


Query: 1   MQGWGQT--PSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEK 60
           M+ WG+T  PS+PSNYV+IL LRERWLKENE   KEKEDLKQL+ +E+QQKV RTEP++K
Sbjct: 1   MEEWGRTRIPSRPSNYVTILDLRERWLKENEREHKEKEDLKQLELEERQQKVPRTEPEKK 60

Query: 61  DDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQI 120
           DDQKPVV+KPR NASSWSRNG    + YYRAVP SNP+NVNETCKK E++ EP+L VP I
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGREKVRMYYRAVPVSNPQNVNETCKKIEDEREPELPVPPI 120

Query: 121 ERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRAR 180
           ERD+KKEK    KG KK    QK +MDKTSPTPEENLKEE+ E ECEV VQN KKN+RAR
Sbjct: 121 ERDKKKEK----KGRKKKRGAQKGKMDKTSPTPEENLKEEVWEKECEVGVQNGKKNVRAR 180

Query: 181 KIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRG-SSQGNRNSR 240
           KIDEKKGTGSQ GPEKTGY H+MKEMENKLSLISVS EIKRG NNGV RG SSQGNRN R
Sbjct: 181 KIDEKKGTGSQRGPEKTGYAHEMKEMENKLSLISVSLEIKRGTNNGVDRGSSSQGNRNFR 240

Query: 241 DHRNLDRWGPRKQRDVGMIWVRKDELSKVA 268
            HRNLDR GPRKQ+DV MIWVRKDELSK A
Sbjct: 241 YHRNLDRRGPRKQKDVKMIWVRKDELSKGA 266

[Close]

BLAST of Lsi08G015360 vs. ExPASy TrEMBL
Match: A0A0A0LNR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354630 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.2e-94
Identity = 202/269 (75.09%), Postives = 224/269 (83.27%), Query Frame = 0


Query: 1   MQGWG--QTPSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEK 60
           M+ WG  Q  SQPSNYV+IL LRERWLKENE   KEKEDLKQL+ +E++QKV RTEP +K
Sbjct: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60

Query: 61  DDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQI 120
           DDQKPVV+KPR NASSWSRNGS   +RYYRA    NPRNVN+ CKK  ++ EP+LA+P+I
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRA----NPRNVNKICKKILDESEPELAIPRI 120

Query: 121 ERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRAR 180
           ERD+KKEK    KG KKN R++K +MDKTSPTPEENLKE  RE ECEV VQN KKN+RAR
Sbjct: 121 ERDKKKEK----KGRKKNRRIRKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRAR 180

Query: 181 KIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRGSSQGNRNSRD 240
           KIDEKK TGS+ GPEKTGY H+MKEMENKLSLISVSFEIKRGRNNGV RGSSQGNRN RD
Sbjct: 181 KIDEKKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRD 240

Query: 241 HRNLDRWGPRKQRDVGMIWVRKDELSKVA 268
            RNLDR GPRKQRDV MIWVRKDELSK A
Sbjct: 241 RRNLDRRGPRKQRDVKMIWVRKDELSKGA 261

[Close]

BLAST of Lsi08G015360 vs. ExPASy TrEMBL
Match: A0A6J1BT17 (myb-like protein X OS=Momordica charantia OX=3673 GN=LOC111004586 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 4.0e-68
Identity = 174/348 (50.00%), Postives = 207/348 (59.48%), Query Frame = 0


Query: 1   MQGWGQTPSQPSNYVSILHLRERWLKENEPNQKEKEDLKQL-DQQEQQQKVLRTEPKEK- 60
           M+  G  PS PSNYV+IL LRERWLKENE NQKEKE+ +Q   +Q Q+QKV R++P+EK 
Sbjct: 1   MEEPGMIPSLPSNYVTILDLRERWLKENERNQKEKEEEEQSPPEQAQEQKVERSKPEEKH 60

Query: 61  ----DDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLA 120
               DD + V+QKPR   +SWS   SG F+  YR VPASNPRNVNE CKKTE +G   + 
Sbjct: 61  DRKLDDGEAVIQKPRLRTTSWSNKRSGQFRMVYRVVPASNPRNVNERCKKTETEG---VT 120

Query: 121 VPQIERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETE----------- 180
            P+I RDE KEK +KRKG KKNP+ + +++D+TS TPEEN KEEMRETE           
Sbjct: 121 EPRIRRDE-KEKKAKRKGHKKNPKAKNEKVDRTSRTPEENSKEEMRETECELGVQNGKDI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 VNERCKKTEAEGKTESLLAKPRNAENKKSRRKGRKENPRAKNEEIDRTLRTPEESLKEEM 240

Query: 241 ----CEVKVQNRKKNMRARKIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKR 268
               CE+ VQN KKN+RA ++DEKKG G QC PE+    H+MKEME KLS ISV FEIKR
Sbjct: 241 PETKCELAVQNGKKNVRAERMDEKKGIGGQCEPEEIDNMHEMKEMETKLSSISVIFEIKR 300

[Close]

BLAST of Lsi08G015360 vs. ExPASy TrEMBL
Match: A0A6J1HDF8 (uncharacterized protein LOC111462917 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462917 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 167/265 (63.02%), Postives = 185/265 (69.81%), Query Frame = 0


Query: 1   MQGWG-QTPSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEKD 60
           M+GWG +  SQPSNY S             P QKEKE        EQQQKV RTEP EKD
Sbjct: 25  MEGWGRRISSQPSNYFS------------NPPQKEKE--------EQQQKVQRTEPAEKD 84

Query: 61  DQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQIE 120
           DQKP VQKPR  A+S SR+GS  FQ YYRA PASNPRNV ET KKTE+ GEP L     E
Sbjct: 85  DQKPAVQKPRIKATSRSRSGSRKFQTYYRAEPASNPRNVKETYKKTEDGGEPLL-----E 144

Query: 121 RDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRARK 180
           +DE KEK S+RKG KKN R  K+EM +TSPTPEENLKEEMRE EC+      +KN+  RK
Sbjct: 145 KDE-KEKKSRRKGRKKNVRAPKEEMQRTSPTPEENLKEEMRERECKA---GGRKNVWVRK 204

Query: 181 IDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRGSSQGNRNSRDH 240
           +DEK+GT  QC PE  GYTH+MKEMENKLS ISVS EI+R + NGVYRG SQGN      
Sbjct: 205 MDEKEGTKGQCRPE-IGYTHEMKEMENKLSGISVSSEIERAKTNGVYRGCSQGN------ 253

Query: 241 RNLDRWGPRKQRDVGMIWVRKDELS 265
           RNL RW PRKQR+VGMIW RKDELS
Sbjct: 265 RNLQRWAPRKQRNVGMIWERKDELS 253

[Close]

BLAST of Lsi08G015360 vs. NCBI nr
Match: XP_038884414.1 (gelsolin-related protein of 125 kDa-like [Benincasa hispida] >XP_038884415.1 gelsolin-related protein of 125 kDa-like [Benincasa hispida])

HSP 1 Score: 426.0 bits (1094), Expect = 2.4e-115
Identity = 225/267 (84.27%), Postives = 244/267 (91.39%), Query Frame = 0


Query: 1   MQGWGQTPSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEKDD 60
           M+ WGQ PSQPSN+VSILHLRERWLKENE NQKEKEDLKQLDQQEQQQKV +TEP+EKDD
Sbjct: 1   MERWGQIPSQPSNFVSILHLRERWLKENERNQKEKEDLKQLDQQEQQQKVHQTEPEEKDD 60

Query: 61  QKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQIER 120
           QKPVV+K R NASSWSRNGS  FQRYYRAVP SNPRNVNETCKKTE++GEP+LAVP++ER
Sbjct: 61  QKPVVRKTRINASSWSRNGSRKFQRYYRAVPVSNPRNVNETCKKTEDEGEPELAVPKVER 120

Query: 121 DEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRARKI 180
           DEK EK SKRKG KKNPR QK+E+DKTSPTPE+NLKEE +  ECE++VQN KKN+RARKI
Sbjct: 121 DEKTEKKSKRKGRKKNPRAQKEEIDKTSPTPEKNLKEETK--ECEIEVQNGKKNVRARKI 180

Query: 181 DEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRGSSQGNRNSRDHR 240
           DEK  T SQCGPEKTGYTH+MKEMENKLSLISVSFEIKRGRNNGVYRG SQGNRN RD R
Sbjct: 181 DEKTETVSQCGPEKTGYTHEMKEMENKLSLISVSFEIKRGRNNGVYRGGSQGNRNFRDPR 240

Query: 241 NLDRWGPRKQRDVGMIWVRKDELSKVA 268
           NLDRWGPRKQRD+GMIWVRKDELSKVA
Sbjct: 241 NLDRWGPRKQRDIGMIWVRKDELSKVA 265

[Close]

BLAST of Lsi08G015360 vs. NCBI nr
Match: KAA0060961.1 (glutamic acid-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 1.9e-96
Identity = 206/270 (76.30%), Postives = 227/270 (84.07%), Query Frame = 0


Query: 1   MQGWGQT--PSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEK 60
           M+ WG+T  PS+PSNYV+IL LRERWLKENE   KEKEDLKQL+ +E+QQKV RTEP++K
Sbjct: 1   MEEWGRTRIPSRPSNYVTILDLRERWLKENEREHKEKEDLKQLELEERQQKVPRTEPEKK 60

Query: 61  DDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQI 120
           DDQKPVV+KPR NASSWSRNG    + YYRAVP SNP+NVNETCKK E++ EP+L VP I
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGREKVRMYYRAVPVSNPQNVNETCKKIEDEREPELPVPPI 120

Query: 121 ERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRAR 180
           ERD+KKEK    KG KK  R QK +MDKTSPTPEENLKEE+ E ECEV VQNRKKN+RAR
Sbjct: 121 ERDKKKEK----KGRKKKRRAQKGKMDKTSPTPEENLKEEVWEKECEVGVQNRKKNVRAR 180

Query: 181 KIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRG-SSQGNRNSR 240
           KIDEKKGTGSQ GPEKTGY H+MKEMENKLSLISVS EIKRG NNGV RG SSQGNRN R
Sbjct: 181 KIDEKKGTGSQRGPEKTGYAHEMKEMENKLSLISVSLEIKRGTNNGVDRGSSSQGNRNFR 240

Query: 241 DHRNLDRWGPRKQRDVGMIWVRKDELSKVA 268
            HRNLDR GPRKQ+DV MIWVRKDELSK A
Sbjct: 241 YHRNLDRRGPRKQKDVKMIWVRKDELSKGA 266

[Close]

BLAST of Lsi08G015360 vs. NCBI nr
Match: XP_008444535.1 (PREDICTED: glutamic acid-rich protein [Cucumis melo] >XP_008444536.1 PREDICTED: glutamic acid-rich protein [Cucumis melo])

HSP 1 Score: 357.8 bits (917), Expect = 7.9e-95
Identity = 204/270 (75.56%), Postives = 225/270 (83.33%), Query Frame = 0


Query: 1   MQGWGQT--PSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEK 60
           M+ WG+T  PS+PSNYV+IL LRERWLKENE   KEKEDLKQL+ +E+QQKV RTEP++K
Sbjct: 1   MEEWGRTRIPSRPSNYVTILDLRERWLKENEREHKEKEDLKQLELEERQQKVPRTEPEKK 60

Query: 61  DDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQI 120
           DDQKPVV+KPR NASSWSRNG    + YYRAVP SNP+NVNETCKK E++ EP+L VP I
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGREKVRMYYRAVPVSNPQNVNETCKKIEDEREPELPVPPI 120

Query: 121 ERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRAR 180
           ERD+KKEK    KG KK    QK +MDKTSPTPEENLKEE+ E ECEV VQN KKN+RAR
Sbjct: 121 ERDKKKEK----KGRKKKRGAQKGKMDKTSPTPEENLKEEVWEKECEVGVQNGKKNVRAR 180

Query: 181 KIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRG-SSQGNRNSR 240
           KIDEKKGTGSQ GPEKTGY H+MKEMENKLSLISVS EIKRG NNGV RG SSQGNRN R
Sbjct: 181 KIDEKKGTGSQRGPEKTGYAHEMKEMENKLSLISVSLEIKRGTNNGVDRGSSSQGNRNFR 240

Query: 241 DHRNLDRWGPRKQRDVGMIWVRKDELSKVA 268
            HRNLDR GPRKQ+DV MIWVRKDELSK A
Sbjct: 241 YHRNLDRRGPRKQKDVKMIWVRKDELSKGA 266

[Close]

BLAST of Lsi08G015360 vs. NCBI nr
Match: XP_011649562.1 (uncharacterized protein DDB_G0286299 [Cucumis sativus] >XP_011649563.1 uncharacterized protein DDB_G0286299 [Cucumis sativus] >KGN62437.1 hypothetical protein Csa_018605 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 8.8e-94
Identity = 202/269 (75.09%), Postives = 224/269 (83.27%), Query Frame = 0


Query: 1   MQGWG--QTPSQPSNYVSILHLRERWLKENEPNQKEKEDLKQLDQQEQQQKVLRTEPKEK 60
           M+ WG  Q  SQPSNYV+IL LRERWLKENE   KEKEDLKQL+ +E++QKV RTEP +K
Sbjct: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60

Query: 61  DDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLAVPQI 120
           DDQKPVV+KPR NASSWSRNGS   +RYYRA    NPRNVN+ CKK  ++ EP+LA+P+I
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRA----NPRNVNKICKKILDESEPELAIPRI 120

Query: 121 ERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETECEVKVQNRKKNMRAR 180
           ERD+KKEK    KG KKN R++K +MDKTSPTPEENLKE  RE ECEV VQN KKN+RAR
Sbjct: 121 ERDKKKEK----KGRKKNRRIRKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRAR 180

Query: 181 KIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKRGRNNGVYRGSSQGNRNSRD 240
           KIDEKK TGS+ GPEKTGY H+MKEMENKLSLISVSFEIKRGRNNGV RGSSQGNRN RD
Sbjct: 181 KIDEKKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRD 240

Query: 241 HRNLDRWGPRKQRDVGMIWVRKDELSKVA 268
            RNLDR GPRKQRDV MIWVRKDELSK A
Sbjct: 241 RRNLDRRGPRKQRDVKMIWVRKDELSKGA 261

[Close]

BLAST of Lsi08G015360 vs. NCBI nr
Match: XP_022131328.1 (myb-like protein X [Momordica charantia])

HSP 1 Score: 268.1 bits (684), Expect = 8.3e-68
Identity = 174/348 (50.00%), Postives = 207/348 (59.48%), Query Frame = 0


Query: 1   MQGWGQTPSQPSNYVSILHLRERWLKENEPNQKEKEDLKQL-DQQEQQQKVLRTEPKEK- 60
           M+  G  PS PSNYV+IL LRERWLKENE NQKEKE+ +Q   +Q Q+QKV R++P+EK 
Sbjct: 1   MEEPGMIPSLPSNYVTILDLRERWLKENERNQKEKEEEEQSPPEQAQEQKVERSKPEEKH 60

Query: 61  ----DDQKPVVQKPRSNASSWSRNGSGNFQRYYRAVPASNPRNVNETCKKTENKGEPQLA 120
               DD + V+QKPR   +SWS   SG F+  YR VPASNPRNVNE CKKTE +G   + 
Sbjct: 61  DRKLDDGEAVIQKPRLRTTSWSNKRSGQFRMVYRVVPASNPRNVNERCKKTETEG---VT 120

Query: 121 VPQIERDEKKEKNSKRKGPKKNPRLQKDEMDKTSPTPEENLKEEMRETE----------- 180
            P+I RDE KEK +KRKG KKNP+ + +++D+TS TPEEN KEEMRETE           
Sbjct: 121 EPRIRRDE-KEKKAKRKGHKKNPKAKNEKVDRTSRTPEENSKEEMRETECELGVQNGKDI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 VNERCKKTEAEGKTESLLAKPRNAENKKSRRKGRKENPRAKNEEIDRTLRTPEESLKEEM 240

Query: 241 ----CEVKVQNRKKNMRARKIDEKKGTGSQCGPEKTGYTHKMKEMENKLSLISVSFEIKR 268
               CE+ VQN KKN+RA ++DEKKG G QC PE+    H+MKEME KLS ISV FEIKR
Sbjct: 241 PETKCELAVQNGKKNVRAERMDEKKGIGGQCEPEEIDNMHEMKEMETKLSSISVIFEIKR 300

The following BLAST results are available for this feature:

BLAST of Lsi08G015360 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G015360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V598	9.1e-97	76.30	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BBD2	3.8e-95	75.56	glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103487826 PE=4 SV=1	[more]
A0A0A0LNR9	4.2e-94	75.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354630 PE=4 SV=1	[more]
A0A6J1BT17	4.0e-68	50.00	myb-like protein X OS=Momordica charantia OX=3673 GN=LOC111004586 PE=4 SV=1	[more]
A0A6J1HDF8	1.9e-65	63.02	uncharacterized protein LOC111462917 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lsi08G015360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884414.1	2.4e-115	84.27	gelsolin-related protein of 125 kDa-like [Benincasa hispida] >XP_038884415.1 gel...	[more]
KAA0060961.1	1.9e-96	76.30	glutamic acid-rich protein [Cucumis melo var. makuwa]	[more]
XP_008444535.1	7.9e-95	75.56	PREDICTED: glutamic acid-rich protein [Cucumis melo] >XP_008444536.1 PREDICTED: ...	[more]
XP_011649562.1	8.8e-94	75.09	uncharacterized protein DDB_G0286299 [Cucumis sativus] >XP_011649563.1 uncharact...	[more]
XP_022131328.1	8.3e-68	50.00	myb-like protein X [Momordica charantia]	[more]

BLAST of Lsi08G015360 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..51
None	No IPR available	COILS	Coil	Coil	coord: 152..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G015360.1	Lsi08G015360.1	mRNA