Lsi08G014890 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G014890
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	WUSCHEL-related homeobox 4
Location	chr08: 23051021 .. 23052789 (-)
RNA-Seq Expression	Lsi08G014890
Synteny	Lsi08G014890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTTTGTTTGTTTGTTTTCAGCAATATATTTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAGAAAATGTGTTGGTTTGTGCAGACAGGAGTAGAAACACATCCAGGAGGGACACGGTGGAATCCAACCTAAGAACAAATAGGAATATTGGAGATGCGTTATAGTAGAGGAATGAGGACTCCTAATGCCCAACAAATTAAACACATAACTGCCCAGCTTGGCAACTACGGGAAGATCGAAGGAAAGAATGTATTTTATTGGTTTCGGAATCATAAAGCCCGTGAGAGACAGAAACAAAAACGCAATAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATCCCCACTTTCCACACGGTACGCTTCAAATTAATTCTCTAATAATCATATCATATCATATCCTGTTGATCCGGATAAATTAATTATAACCGAATATTATTATTATATTTTAATTGCAGGGAGAAGAAGATAATCCGTACAAGAGGAAGTGCTTGTACTGGGGTTTTGAGTGTTTAGTAGAAGATCATAACGGTATAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTCTGGAGTTATTTCCCTTGCACCCAGAACGCAGATGATCCAATTTTTGGAAAATTTAAAAAAAAAAAAAAAGAAAAAGGGGAATTAATATTGGTAAAAAAGAAAGGGGGAAAAGAGGTGGGGTTTGGAAGAAGCAAGACCAAATGATGAGATGAGGTTGACTTGAGAGCATATATCTTTTTTTTTTCTTTTTTTGGGTTTGGGAGGTGGGAAAATCTTTGTGTGTGTATATAATAAGAGGTGTTGGGTTTGATCCAATTCTTCACCATGGTATTAAGCATGAAGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCCCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCCCCTAAACTTCAACAACATAACCAACAACAACCCACCTCCGATAACACCACCACCACCACCACCACGCTCACCTCTTTTGACCTCAAAACCTTCATCAAACCCGATTGCGGTCCCCGAAAACTCGGTTCCTCCCACGATCATAACAAAGACTCCTCCTCCTCTTCTTCTTCCCTCCAGGTAACTAATTAACTATATTTTCTACAATACCTTTCGTCTTTTGATTTTTTTTTTTTTTTTAAAAAAAAAGTACATGTGTTGGTTTGTGCAGACAGGAGTAGAAACACATCCAGGAGGGACACGGTGGAATCCAACCCAAGAACAAATAGGAATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCTAATGCCCAACAAATTGAACACATAACTGCCCAGCTTGGCAACTACGGGAAGATCGAAGGAAAGAATGTATTTTATTGGTTTCAGAATCATAAAGCCCGTGAGAGACAGAAACAAAAACGCAATAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATCCCCACTTTCCACACGGTACGCTTCAAATTAATTCTCTAATAATCATATCATATCATATCCTGTTGATCCGTATAAATTAATTATAACCGAATATTATTATTATATTTTAATTGCAGGGAGAAGAAGATAGTCCGTACAAGAGGAAGTGCTTGTACTGGGGTTTTGAGTGTTTAGTAGAAGATCATAACGGTATAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTCTGGAGTTATTTCCCTTGCACCCAGAACGCAGATGATCCAATTTTTGGAAAATTT

mRNA sequence

ATGAAGAAAATGTGTTGGTTTGTGCAGACAGGAGTAGAAACACATCCAGGAGGGACACGTAGAGGAATGAGGACTCCTAATGCCCAACAAATTAAACACATAACTGCCCAGCTTGGCAACTACGGGAAGATCGAAGGAAAGAATGTATTTTATTGGTTTCGGAATCATAAAGCCCGTGAGAGACAGAAACAAAAACGCAATAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATCCCCACTTTCCACACGGGAGAAGAAGATAATCCGTACAAGAGGAAGTGCTTGTACTGGGGTTTTGAGTGTTTAGTAGAAGATCATAACGAGGTGTTGGGTTTGATCCAATTCTTCACCATGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCCCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCCCCTAAACTTCAACAACATAACCAACAACAACCCACCTCCGATAACACCACCACCACCACCACCACGCTCACCTCTTTTGACCTCAAAACCTTCATCAAACCCGATTGCGGTCCCCGAAAACTCGGTTCCTCCCACGATCATAACAAAGACTCCTCCTCCTCTTCTTCTTCCCTCCAGACAGGAGTAGAAACACATCCAGGAGGGACACGGTGGAATCCAACCCAAGAACAAATAGGAATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCTAATGCCCAACAAATTGAACACATAACTGCCCAGCTTGGCAACTACGGGAAGATCGAAGGAAAGAATAATCATAAAGCCCGTGAGAGACAGAAACAAAAACGCAATAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATCCCCACTTTCCACACGGGAGAAGAAGATAGTCCGTACAAGAGGAAGTGCTTGTACTGGGGTTTTGAGTGTTTAGTAGAAGATCATAACGGTATAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTCTGGAGTTATTTCCCTTGCACCCAGAACGCAGATGATCCAATTTTTGGAAAATTT

Coding sequence (CDS)

ATGAAGAAAATGTGTTGGTTTGTGCAGACAGGAGTAGAAACACATCCAGGAGGGACACGTAGAGGAATGAGGACTCCTAATGCCCAACAAATTAAACACATAACTGCCCAGCTTGGCAACTACGGGAAGATCGAAGGAAAGAATGTATTTTATTGGTTTCGGAATCATAAAGCCCGTGAGAGACAGAAACAAAAACGCAATAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATCCCCACTTTCCACACGGGAGAAGAAGATAATCCGTACAAGAGGAAGTGCTTGTACTGGGGTTTTGAGTGTTTAGTAGAAGATCATAACGAGGTGTTGGGTTTGATCCAATTCTTCACCATGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCCCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCCCCTAAACTTCAACAACATAACCAACAACAACCCACCTCCGATAACACCACCACCACCACCACCACGCTCACCTCTTTTGACCTCAAAACCTTCATCAAACCCGATTGCGGTCCCCGAAAACTCGGTTCCTCCCACGATCATAACAAAGACTCCTCCTCCTCTTCTTCTTCCCTCCAGACAGGAGTAGAAACACATCCAGGAGGGACACGGTGGAATCCAACCCAAGAACAAATAGGAATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCTAATGCCCAACAAATTGAACACATAACTGCCCAGCTTGGCAACTACGGGAAGATCGAAGGAAAGAATAATCATAAAGCCCGTGAGAGACAGAAACAAAAACGCAATAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATCCCCACTTTCCACACGGGAGAAGAAGATAGTCCGTACAAGAGGAAGTGCTTGTACTGGGGTTTTGAGTGTTTAGTAGAAGATCATAACGGTATAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTCTGGAGTTATTTCCCTTGCACCCAGAACGCAGATGA

Protein sequence

MKKMCWFVQTGVETHPGGTRRGMRTPNAQQIKHITAQLGNYGKIEGKNVFYWFRNHKARERQKQKRNSLGLPHSPRTPPPPPIIPTFHTGEEDNPYKRKCLYWGFECLVEDHNEVLGLIQFFTMVHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDNTTTTTTTLTSFDLKTFIKPDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNNHKARERQKQKRNSLGLPHSPRTPPPPPIIPTFHTGEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPERR

Homology

[Close]

BLAST of Lsi08G014890 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-45
Identity = 128/264 (48.48%), Postives = 147/264 (55.68%), Query Frame = 0


Query: 125 VHQFARGF---WDE----PSLSLGCKRLRPLAPKLQQHNQQQPTSDNTTTTTTTLTSFDL 184
           VH+F+ GF   WD+     SLSL CKRLRPLAPKL       P+S +  T+ T    FDL
Sbjct: 3   VHEFSNGFSSSWDQHDSTSSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSAT----FDL 62

Query: 185 KTFIKPD-CGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSR 244
           K FI+PD  GP K     +H +D           +ETHPGGTRWNPTQEQIGILEMLY  
Sbjct: 63  KNFIRPDQTGPTKF----EHKRDPPHQ-------LETHPGGTRWNPTQEQIGILEMLYKG 122

Query: 245 GMRTPNAQQIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSL------------ 304
           GMRTPNAQQIEHIT QLG YGKIEGKN      NHKARERQKQKRN+L            
Sbjct: 123 GMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTT 182

Query: 305 -----GLPHSPRTPPPPPII--PTFHTGE--EDSPYKRKCLYWGFECL-VEDHNG----- 347
                 +    RT     I+  P     E  E++ YKR C  WGFE L +E+        
Sbjct: 183 GVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRNKNSST 242

[Close]

BLAST of Lsi08G014890 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20
Identity = 73/182 (40.11%), Postives = 97/182 (53.30%), Query Frame = 0


Query: 187 PRKLGSSHDHNKDSSSSSSSLQTGVETHP--GGTRWNPTQEQIGILEMLYSRGMRTPNAQ 246
           PRK+ +  D     + ++S L       P  G TRWNP+ EQI +LEMLY  GMRTPN+ 
Sbjct: 58  PRKMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSV 117

Query: 247 QIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTFHT 306
           QIE IT +LG YG+IEGKN      NHKARERQKQKR +L       +   P ++P    
Sbjct: 118 QIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL----LTLSTLDPSLLPATAN 177

Query: 307 GEEDSP-------------YKRKCLYWGFECLVEDHNGIMCKKEEG---HDRTLELFPLH 345
             +++P              KR+C  WG      D + ++  +  G    + TLELFPLH
Sbjct: 178 ETKEAPEKKEKDVEDGLASCKRRCKAWGDG--AGDGDAVVATEAAGGCTDEVTLELFPLH 233

[Close]

BLAST of Lsi08G014890 vs. ExPASy Swiss-Prot
Match: Q7XTV3 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20
Identity = 73/182 (40.11%), Postives = 97/182 (53.30%), Query Frame = 0


Query: 187 PRKLGSSHDHNKDSSSSSSSLQTGVETHP--GGTRWNPTQEQIGILEMLYSRGMRTPNAQ 246
           PRK+ +  D     + ++S L       P  G TRWNP+ EQI +LEMLY  GMRTPN+ 
Sbjct: 58  PRKMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSV 117

Query: 247 QIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTFHT 306
           QIE IT +LG YG+IEGKN      NHKARERQKQKR +L       +   P ++P    
Sbjct: 118 QIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL----LTLSTLDPSLLPATAN 177

Query: 307 GEEDSP-------------YKRKCLYWGFECLVEDHNGIMCKKEEG---HDRTLELFPLH 345
             +++P              KR+C  WG      D + ++  +  G    + TLELFPLH
Sbjct: 178 ETKEAPEKKEKDVEDGLASCKRRCKAWGDG--AGDGDAVVATEAAGGCTDEVTLELFPLH 233

[Close]

BLAST of Lsi08G014890 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-14
Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 219 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKN------NHKARERQK 278
           RW PT+EQI +LE LY +G+RTP A+QI+ ITA+L  +G IEGKN      NHKAR+RQK
Sbjct: 44  RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQK 103

Query: 279 QKRNSLG-LPHSPRTPPPPPII 294
           QK+ S        R PPP P++
Sbjct: 104 QKQQSFDYFSKLFRRPPPLPVL 125

[Close]

BLAST of Lsi08G014890 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-14
Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 219 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKN------NHKARERQK 278
           RW PT+EQI +LE LY +G+RTP A+QI+ ITA+L  +G IEGKN      NHKAR+RQK
Sbjct: 44  RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQK 103

Query: 279 QKRNSLG-LPHSPRTPPPPPII 294
           QK+ S        R PPP P++
Sbjct: 104 QKQQSFDYFSKLFRRPPPLPVL 125

[Close]

BLAST of Lsi08G014890 vs. ExPASy TrEMBL
Match: A0A5A7V042 (WUSCHEL-related homeobox 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00510 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 7.4e-115
Identity = 209/227 (92.07%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDNTTTTTTTLTSFDLKTFIKPD 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL     QQPTSDNTTTTTTTLT+FDLKTFIKPD
Sbjct: 3   VHQFARGFWDEPSLSLGCKRLRPLAPKL-----QQPTSDNTTTTTTTLTTFDLKTFIKPD 62

Query: 185 CGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 244
           CGPRK GSSHDH+KDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ
Sbjct: 63  CGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 122

Query: 245 QIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTFHT 304
           QIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP FHT
Sbjct: 123 QIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHT 182

Query: 305 GEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPER 346
           G+EDSPYKRKCLYWGFECLVED NG+MCKKEEGHDRTLELFPLHPER
Sbjct: 183 GDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPER 223

[Close]

BLAST of Lsi08G014890 vs. ExPASy TrEMBL
Match: A0A0A0LNZ2 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356610 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 2.1e-114
Identity = 209/227 (92.07%), Postives = 212/227 (93.39%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDNTTTTTTTLTSFDLKTFIKPD 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL     QQPTSDNTTTTTTTLT+FDLKTFIKPD
Sbjct: 7   VHQFARGFWDEPSLSLGCKRLRPLAPKL-----QQPTSDNTTTTTTTLTTFDLKTFIKPD 66

Query: 185 CGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 244
           CGPRK GSSHDH+KDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ
Sbjct: 67  CGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 126

Query: 245 QIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTFHT 304
           QIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP FHT
Sbjct: 127 QIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHT 186

Query: 305 GEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPER 346
           GEEDSPYKRKCLYWGFECLVED NG+MCKKEE HDRTLELFPLHPER
Sbjct: 187 GEEDSPYKRKCLYWGFECLVED-NGLMCKKEEDHDRTLELFPLHPER 227

[Close]

BLAST of Lsi08G014890 vs. ExPASy TrEMBL
Match: E5GB81 (Homeodomain transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 2.4e-113
Identity = 209/229 (91.27%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDN--TTTTTTTLTSFDLKTFIK 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL     QQPTSDN  TTTTTTTLT+FDLKTFIK
Sbjct: 3   VHQFARGFWDEPSLSLGCKRLRPLAPKL-----QQPTSDNTTTTTTTTTLTTFDLKTFIK 62

Query: 185 PDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN 244
           PDCGPRK GSSHDH+KDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN
Sbjct: 63  PDCGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN 122

Query: 245 AQQIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTF 304
           AQQIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP F
Sbjct: 123 AQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAF 182

Query: 305 HTGEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPER 346
           HTG+EDSPYKRKCLYWGFECLVED NG+MCKKEEGHDRTLELFPLHPER
Sbjct: 183 HTGDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPER 225

[Close]

BLAST of Lsi08G014890 vs. ExPASy TrEMBL
Match: A0A1S3BBG0 (WUSCHEL-related homeobox 4 OS=Cucumis melo OX=3656 GN=LOC103487871 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 2.4e-113
Identity = 209/229 (91.27%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDN--TTTTTTTLTSFDLKTFIK 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL     QQPTSDN  TTTTTTTLT+FDLKTFIK
Sbjct: 7   VHQFARGFWDEPSLSLGCKRLRPLAPKL-----QQPTSDNTTTTTTTTTLTTFDLKTFIK 66

Query: 185 PDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN 244
           PDCGPRK GSSHDH+KDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN
Sbjct: 67  PDCGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN 126

Query: 245 AQQIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTF 304
           AQQIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP F
Sbjct: 127 AQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAF 186

Query: 305 HTGEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPER 346
           HTG+EDSPYKRKCLYWGFECLVED NG+MCKKEEGHDRTLELFPLHPER
Sbjct: 187 HTGDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPER 229

[Close]

BLAST of Lsi08G014890 vs. ExPASy TrEMBL
Match: A0A6J1KA18 (WUSCHEL-related homeobox 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492455 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 8.5e-103
Identity = 204/252 (80.95%), Postives = 215/252 (85.32%), Query Frame = 0


Query: 119 IQFFTM-----VHQFARGFWDEPSLSLGCKRLRPLAPKLQQ-----HNQQQ---PTSDNT 178
           ++FFTM     VHQFARGFWDEPSLSLGCKRLRPLAPKLQQ     H+QQQ   P+S + 
Sbjct: 1   MRFFTMGSSMKVHQFARGFWDEPSLSLGCKRLRPLAPKLQQQQQHHHHQQQQQHPSSSSD 60

Query: 179 TTTTTTLTSFDLKTFIKPDCGPRKLGSSHDHNK--DSSSSSSSLQTGVETHPGGTRWNPT 238
             TTTTLT+ DLKTFI+PDCGPRKLGSSHDHNK   SSSSSSS QT VETHPGGTRWNPT
Sbjct: 61  HNTTTTLTTLDLKTFIRPDCGPRKLGSSHDHNKGSSSSSSSSSPQTAVETHPGGTRWNPT 120

Query: 239 QEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKN------NHKARERQKQKRNS 298
           QEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKN      NHKARERQKQKRNS
Sbjct: 121 QEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNS 180

Query: 299 LGLPHSPRTPPPPPIIPTFH---TGEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDR 347
           LGLPHSPRT PPPPI+PTFH    GEEDSPYK+KCLYWGFECLVE HNGI+CKKE+G DR
Sbjct: 181 LGLPHSPRT-PPPPILPTFHPSFPGEEDSPYKKKCLYWGFECLVE-HNGILCKKEDG-DR 240

[Close]

BLAST of Lsi08G014890 vs. NCBI nr
Match: XP_038885673.1 (WUSCHEL-related homeobox 4 [Benincasa hispida])

HSP 1 Score: 424.5 bits (1090), Expect = 8.9e-115
Identity = 214/231 (92.64%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDN---TTTTTTTLTSFDLKTFI 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL QH   QPTSDN   TTTTTTTLTSFDLKTFI
Sbjct: 7   VHQFARGFWDEPSLSLGCKRLRPLAPKL-QHQNHQPTSDNTTVTTTTTTTLTSFDLKTFI 66

Query: 185 KPDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTP 244
           KPDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTP
Sbjct: 67  KPDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTP 126

Query: 245 NAQQIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPT 304
           NAQQIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP 
Sbjct: 127 NAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPA 186

Query: 305 FHTGEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEG-HDRTLELFPLHPER 346
           FHTGEEDSPYKRKCLYWGFECLVED NGIMCKKE+G HDRTLELFPLHPER
Sbjct: 187 FHTGEEDSPYKRKCLYWGFECLVED-NGIMCKKEDGDHDRTLELFPLHPER 235

[Close]

BLAST of Lsi08G014890 vs. NCBI nr
Match: KAA0060918.1 (WUSCHEL-related homeobox 4 [Cucumis melo var. makuwa])

HSP 1 Score: 423.7 bits (1088), Expect = 1.5e-114
Identity = 209/227 (92.07%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDNTTTTTTTLTSFDLKTFIKPD 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL     QQPTSDNTTTTTTTLT+FDLKTFIKPD
Sbjct: 3   VHQFARGFWDEPSLSLGCKRLRPLAPKL-----QQPTSDNTTTTTTTLTTFDLKTFIKPD 62

Query: 185 CGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 244
           CGPRK GSSHDH+KDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ
Sbjct: 63  CGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 122

Query: 245 QIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTFHT 304
           QIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP FHT
Sbjct: 123 QIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHT 182

Query: 305 GEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPER 346
           G+EDSPYKRKCLYWGFECLVED NG+MCKKEEGHDRTLELFPLHPER
Sbjct: 183 GDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPER 223

[Close]

BLAST of Lsi08G014890 vs. NCBI nr
Match: XP_004142872.1 (WUSCHEL-related homeobox 4 [Cucumis sativus] >KGN62487.1 hypothetical protein Csa_018691 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 4.4e-114
Identity = 209/227 (92.07%), Postives = 212/227 (93.39%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDNTTTTTTTLTSFDLKTFIKPD 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL     QQPTSDNTTTTTTTLT+FDLKTFIKPD
Sbjct: 7   VHQFARGFWDEPSLSLGCKRLRPLAPKL-----QQPTSDNTTTTTTTLTTFDLKTFIKPD 66

Query: 185 CGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 244
           CGPRK GSSHDH+KDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ
Sbjct: 67  CGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQ 126

Query: 245 QIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTFHT 304
           QIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP FHT
Sbjct: 127 QIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHT 186

Query: 305 GEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPER 346
           GEEDSPYKRKCLYWGFECLVED NG+MCKKEE HDRTLELFPLHPER
Sbjct: 187 GEEDSPYKRKCLYWGFECLVED-NGLMCKKEEDHDRTLELFPLHPER 227

[Close]

BLAST of Lsi08G014890 vs. NCBI nr
Match: ADN33723.1 (homeodomain transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 418.7 bits (1075), Expect = 4.9e-113
Identity = 209/229 (91.27%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDN--TTTTTTTLTSFDLKTFIK 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL     QQPTSDN  TTTTTTTLT+FDLKTFIK
Sbjct: 3   VHQFARGFWDEPSLSLGCKRLRPLAPKL-----QQPTSDNTTTTTTTTTLTTFDLKTFIK 62

Query: 185 PDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN 244
           PDCGPRK GSSHDH+KDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN
Sbjct: 63  PDCGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN 122

Query: 245 AQQIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTF 304
           AQQIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP F
Sbjct: 123 AQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAF 182

Query: 305 HTGEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPER 346
           HTG+EDSPYKRKCLYWGFECLVED NG+MCKKEEGHDRTLELFPLHPER
Sbjct: 183 HTGDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPER 225

[Close]

BLAST of Lsi08G014890 vs. NCBI nr
Match: XP_008444600.1 (PREDICTED: WUSCHEL-related homeobox 4 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 4.9e-113
Identity = 209/229 (91.27%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 125 VHQFARGFWDEPSLSLGCKRLRPLAPKLQQHNQQQPTSDN--TTTTTTTLTSFDLKTFIK 184
           VHQFARGFWDEPSLSLGCKRLRPLAPKL     QQPTSDN  TTTTTTTLT+FDLKTFIK
Sbjct: 7   VHQFARGFWDEPSLSLGCKRLRPLAPKL-----QQPTSDNTTTTTTTTTLTTFDLKTFIK 66

Query: 185 PDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN 244
           PDCGPRK GSSHDH+KDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN
Sbjct: 67  PDCGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPN 126

Query: 245 AQQIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSLGLPHSPRTPPPPPIIPTF 304
           AQQIEHITAQLGNYGKIEGKN      NHKARERQKQKRNSLGLPHSPRTPPPPPIIP F
Sbjct: 127 AQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAF 186

Query: 305 HTGEEDSPYKRKCLYWGFECLVEDHNGIMCKKEEGHDRTLELFPLHPER 346
           HTG+EDSPYKRKCLYWGFECLVED NG+MCKKEEGHDRTLELFPLHPER
Sbjct: 187 HTGDEDSPYKRKCLYWGFECLVED-NGLMCKKEEGHDRTLELFPLHPER 229

[Close]

BLAST of Lsi08G014890 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-46
Identity = 128/264 (48.48%), Postives = 147/264 (55.68%), Query Frame = 0


Query: 125 VHQFARGF---WDE----PSLSLGCKRLRPLAPKLQQHNQQQPTSDNTTTTTTTLTSFDL 184
           VH+F+ GF   WD+     SLSL CKRLRPLAPKL       P+S +  T+ T    FDL
Sbjct: 3   VHEFSNGFSSSWDQHDSTSSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSAT----FDL 62

Query: 185 KTFIKPD-CGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSR 244
           K FI+PD  GP K     +H +D           +ETHPGGTRWNPTQEQIGILEMLY  
Sbjct: 63  KNFIRPDQTGPTKF----EHKRDPPHQ-------LETHPGGTRWNPTQEQIGILEMLYKG 122

Query: 245 GMRTPNAQQIEHITAQLGNYGKIEGKN------NHKARERQKQKRNSL------------ 304
           GMRTPNAQQIEHIT QLG YGKIEGKN      NHKARERQKQKRN+L            
Sbjct: 123 GMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTT 182

Query: 305 -----GLPHSPRTPPPPPII--PTFHTGE--EDSPYKRKCLYWGFECL-VEDHNG----- 347
                 +    RT     I+  P     E  E++ YKR C  WGFE L +E+        
Sbjct: 183 GVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRNKNSST 242

[Close]

BLAST of Lsi08G014890 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-14
Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 20  RRGMRTPNAQQIKHITAQLGNYGKIEGKNVFYWFRNHKARERQKQKR 67
           R+G RTP+A  I+ ITAQL  YGKIEGKNVFYWF+NHKARERQK++R
Sbjct: 92  RQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRR 138

[Close]

BLAST of Lsi08G014890 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 20  RRGMRTPNAQQIKHITAQLGNYGKIEGKNVFYWFRNHKARERQKQKRNSLGLPHSPRTPP 79
           R G+RTP   QI+ I+ +L  YGKIE KNVFYWF+NHKARERQK+++ S+   H    P 
Sbjct: 40  RAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQKRRKISIDFDHHHHQPS 99

Query: 80  PPPIIPTFHTGEEDNPYKRKCL 102
              +   F   EED   + K +
Sbjct: 100 TRDV---FEISEEDCQEEEKVI 118

[Close]

BLAST of Lsi08G014890 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-13
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 20 RRGMRTPNAQQIKHITAQLGNYGKIEGKNVFYWFRNHKARERQKQKR 67
          R G+RTPNA QI+ ITA L  YG+IEGKNVFYWF+NHKAR+RQK ++
Sbjct: 24 RSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQKLRK 70

[Close]

BLAST of Lsi08G014890 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-12
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 20 RRGMRTPNAQQIKHITAQLGNYGKIEGKNVFYWFRNHKARERQKQKRNSLG-----LPHS 79
          + G+RTP+A QI+ IT +L  YG IEGKNVFYWF+NHKAR+RQKQK+  +      L  +
Sbjct: 30 KEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQERMAYFNRLLHKT 89

Query: 80 PRTPPPPP 83
           R   PPP
Sbjct: 90 SRFFYPPP 97

The following BLAST results are available for this feature:

BLAST of Lsi08G014890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7J9	2.0e-45	48.48	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]
Q25AM2	1.3e-20	40.11	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S...	[more]
Q7XTV3	1.3e-20	40.11	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2...	[more]
A2WWU7	4.1e-14	53.66	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 S...	[more]
Q8LR86	4.1e-14	53.66	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2...	[more]

BLAST of Lsi08G014890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V042	7.4e-115	92.07	WUSCHEL-related homeobox 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0LNZ2	2.1e-114	92.07	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356610 PE...	[more]
E5GB81	2.4e-113	91.27	Homeodomain transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BBG0	2.4e-113	91.27	WUSCHEL-related homeobox 4 OS=Cucumis melo OX=3656 GN=LOC103487871 PE=4 SV=1	[more]
A0A6J1KA18	8.5e-103	80.95	WUSCHEL-related homeobox 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492455 PE=4...	[more]

BLAST of Lsi08G014890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885673.1	8.9e-115	92.64	WUSCHEL-related homeobox 4 [Benincasa hispida]	[more]
KAA0060918.1	1.5e-114	92.07	WUSCHEL-related homeobox 4 [Cucumis melo var. makuwa]	[more]
XP_004142872.1	4.4e-114	92.07	WUSCHEL-related homeobox 4 [Cucumis sativus] >KGN62487.1 hypothetical protein Cs...	[more]
ADN33723.1	4.9e-113	91.27	homeodomain transcription factor [Cucumis melo subsp. melo]	[more]
XP_008444600.1	4.9e-113	91.27	PREDICTED: WUSCHEL-related homeobox 4 [Cucumis melo]	[more]

BLAST of Lsi08G014890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46480.1	1.4e-46	48.48	WUSCHEL related homeobox 4	[more]
AT3G18010.1	1.9e-14	74.47	WUSCHEL related homeobox 1	[more]
AT3G11260.1	1.6e-13	46.34	WUSCHEL related homeobox 5	[more]
AT2G28610.1	2.8e-13	70.21	Homeodomain-like superfamily protein	[more]
AT5G59340.1	2.3e-12	54.41	WUSCHEL related homeobox 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 218..262 e-value: 1.2E-7 score: 31.5 coord: 23..62 e-value: 1.8E-9 score: 37.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..89
IPR044186	WUSCHEL-related homeobox 4	PANTHER	PTHR47716	WUSCHEL-RELATED HOMEOBOX 4	coord: 20..114 coord: 125..346
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 24..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G014890.1	Lsi08G014890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0010087	phloem or xylem histogenesis
biological_process	GO:0010067	procambium histogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity