Lsi08G014110 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAGGTTGGAAAGGTATTAAGGTAGGTGGGGAGTATTTATATAATTGAAATGAAATGGAGAAGAAGAGATGAAAGATGGGCTAAAAAGAGGGAGATTTTGGAGAAAAGCAATGCACGTGGTGGGAAGAGAAGGTATGGGAAAGGGTAAAATAATGAGACAACTTTCACTGTATCATCTTTCTCTCTCAAACTGTGGCTGTGGCCTTAGGCTCACCCACATTAATCAAATCAATCTGGTTTTGTTTCGGTTTGGTTTATGCCACTTTCTTTGCCTTCCTTTCCTTTCCCACTTCCATTATTATTCATCTAGCACAAGCTTTGAGAGCTACACACAGAGAGCGAGAGGCGGCCAAACGAGGATTTTAACCCTTGTTTCTGGCCCCTCTCACTCTTCTTCTTTTTCTTCCTCTCTCTTTGGGTTTCCCTCTTCTGGGTTTGCCTTTTTATTCTCCCTTGCCCAACCTGCTGCCTCATTTCGATGCCCCATTTTGGATCTTTTTGAATCTGTGAGTTTTTTTTTTTTACTTCGTGTTTTATTCAGCTCCCATTTCTCTGTTTTTGTGATGTTTCTGACCTGGGTTTGATTTCTTTATATGTGTGGTTGTTGAATTCTTGGGTTTTCTCGGTTGATAAGATGTCAGGGTGAATGATTAAGAACTTGTGGGGTTTTTTTTTTCAGAGGCAGGCTTCGAGATTGTTTGATTGTTTGTTTTGTGTTTTTTTGTTACTGAATCTGTGAATTTTCCTCCCCTGGTTGTTTTGTCTTGATTTGTAACGGTTGGGGTCAGTAAACGCCTTAGCAGAAAGCCTGGTTTCCTGTTTTGTTGATCTTTGAAAATGGACTTGACTATTAATGCTGCCCACTTTGGAGTTCCCTTTTCTTCGTTGGTTAATTGTCAATTCAGATCTGAATTTCATGTTACCAATTTTTTCCCCTCCTTCAATTGATAACTGTTACTGTTCAATTCCAAAATTGAAGAATGTGCTGCAGTTTCTACCAACTGCCTAGTGATTGATTGTTTTTCTTTTGTTGATTTCCAGAGTCACATTTGCTCATTACAAATCTTTCATATATATTGCTCCTTTTTTTAAGTTGAAGAACCTAGTTTTGTTACTTTACTGGGTTGTTGTCCCTTTCCATTGATAGCCAATGGGGAGTTTGGATCGACTAGTTCAAGGTTACTTAATCTGTACACGGGTCGATTTGAAAGAAAACAATTCTAATATCAGTTTGATTTTGAAAATTTTGAGGCACAATGTGTTTTCATTGATAGTTCCAAAAATATGAGAATCCTAGCTTTTAGGAGTGCTTTTAATAAAAGGTTTGATGCTTGATGTTCTGTTGGAGAACTTAGCTGGCTTTTAATAAATGCACTGCAACTTTATTTCTATTTCTATGTATATTTTTGAACTAAAAGTATTAAGCACATAAGTTGTTCCTTTTCAGATCTATTTAGATTTTGGATACTGAAATGAAAACCAATAATTGTTCAAGTTATTAGCCTCCTCTAATGTAATGGGAGAAGGGAACTAGTATATCTTCTCAATATGGTAAAGAATTAAAAGTATTTAATGAATGAGGATGTCATGATGACTGTGGTGCTACCAGGCTTTATTTTTTTTAAAAAATTATCAAGTAAAAAAGTTATCATTTATATCATAATTACTTTTTTAAAATTGGGAACTGTGATAAGTGTTCTTGTACAAATTGAGGTATCATTATTTACAAGTTTGCAAATACCTGAAAAACAGCTTTAGTCTTTTTTCAAAATCAGGCTAACATCATCGTTTAAATGTCATTCTAAAGAATAAAAAGAATGTTTTTAAACTCAACTTCCAGTCATTGGTCTTAATTTGCTACAAATCTGCTGCAAAAATGGATTCCTCAACTTTCCTTTTGATTTGTATCTAAGACAGTTCCAATCAGCTCCTGCTAGCTTGTTTAAGTTTTGTTACCCTTTTCTAACGGGTACTCAGATAGACCTAATATTCTGCAGACTCAATGAACTTATAAGTTTTTGGGCGTCCTATCTCATTCATGGCATGGTGATTGAGTAAGTTAGAGAATAATCACATAATGTTGAAATTTGCATACTTTTTACTCTCCCTCCAAAGCATACGTTTGAACCCATATGGTCATTTATGAACCAGGTGTGTCTGTTGGACTGAGCTATATCTCATGAGTTGGCACAATTCAGGCATAAGATAAGATTGTTGTATGGTATAGGAGTAATTTGGATTGGAGAGTTCTTCACTTAAATATGAATAGTCTTTTTCATCACTTGAATGACAGAGGTAAAATTTTGATTGCCAAACCTAAGGTTTGTTATTACAACTCATCTTTCGTCATAAGCCCAAGGATCAAGGTTTCACAATCTTTCTGAAATTGGAAGCTCCTTTTTGTGTGATGTATAAAATATCCTGCAAGTTTTGTTAGACAATCAAATGCTGTGCTGTTTGTTGATTAGGTGTTATTCTCGGTTTTGGTTTTGATGCATGTTGATGGGTCAAGAGATTTTCTGAGGATAATATCATGAATCTGTCTTGTCTTTGTACATCCCCATATTGGTTATTTATTCTGCTTCTGTCCCTGTAACAGATTGCAGAGGGGCATCAACCAAATTCGGGTTTTTTATTTGTCAACAAAATGAAAATGAAGCTTGGATGCAAGAAATGGAAATCAATTGCCCCTCGTTTGAAAGGAAAATCACCATCTCCCTCTTTTTGTCTATTTTCCAAAACTAAGTCAGTTAACTATGGTCCAGGCAAAACACCAGTTTATCTAAATGTGTACGATTTAACCCCTATGAATGGTTATGTCTATTGGGCAGGCCTGGGTATCTTTCACTCTGGTGTAGAAGGTAATGTCACAAACTTATCTTTTGCAAGTACAAAACCAGTTGTGATCTGAAATTAGAAACTTAGTAATGCACCTTGTGATGTTATTCCTTTCTGATAGTGAAAAGTTTGCATTGTGCAGTCCATGGTGTAGAATATGCATTTGGAGCTCATGACTATCCAACCAGTGGCGTTTTTGAAGTTGAGCCTCGACAATGCCCGGGTTTCAAGTTCAGGAGGTCAATATTGATTGGCACAACCTGCCTTGATCCTCATGAAGTCAGAGAGTTCATGGAGCAACGCTCTTCAAGCTACTATGGGGATACATATCACCTAATTGTCAAGAACTGCAATCATTTCTGCAGGGACGTCTGTCATCAGTTGACTGGAAAATCAATTCCAAAATGGGTAAATCGACTGGCTAAAATAGGTACCTTTCTATCTCATTCACTCTTAAACGTGATTTTCCAGCTGAAATCATATCATGTGAATGCTCATTCTATTGATTTGATCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAGGTTTCAGCTACACTACAATTTTCATTGGTAGATACTGTTCTAATACATCCATTGTCAAAAGTTCTTTATTCTCTGTTGACTTGGTTGGCTAGCTTCCATCATCCTACCTATTTATTTTGCAATTTTAATAAGTAACTTTCTTCAAACTGCCACTTGCTTTCAATCCATTATGGTATTATGACATTTGGGTTAAATTAATTGTAAAGAGTGGTTTGTCATATTCACCAAAAGATTGACTAAAAGGGATCAACATTGCAGGTTCCGTTTGTAATTGCATACTTCCTGAGTCCCTTAGAATATCTGCCGTAAGACACGATCCCGCATACCCACCATACGAGACCGAGAAGACGAAGCTGAGGAATGCCTTCAGTTGCTTGTCTTCTATATCATCGCGGCAGAAGCAACTGTCTTCAACTTCATTATTTCTACAGTCGCCATTGAAAGGCTGGGAGTTGAAAAAATCCAGCAGTGAACCCTCATGCCTCAAAGGATAG TGAAAGGTTGGAAAGGTATTAAGGTAGGTGGGGAGTATTTATATAATTGAAATGAAATGGAGAAGAAGAGATGAAAGATGGGCTAAAAAGAGGGAGATTTTGGAGAAAAGCAATGCACGTGGTGGGAAGAGAAGGTATGGGAAAGGGTAAAATAATGAGACAACTTTCACTGTATCATCTTTCTCTCTCAAACTGTGGCTGTGGCCTTAGGCTCACCCACATTAATCAAATCAATCTGGTTTTGTTTCGGTTTGGTTTATGCCACTTTCTTTGCCTTCCTTTCCTTTCCCACTTCCATTATTATTCATCTAGCACAAGCTTTGAGAGCTACACACAGAGAGCGAGAGGCGGCCAAACGAGGATTTTAACCCTTGTTTCTGGCCCCTCTCACTCTTCTTCTTTTTCTTCCTCTCTCTTTGGGTTTCCCTCTTCTGGGTTTGCCTTTTTATTCTCCCTTGCCCAACCTGCTGCCTCATTTCGATGCCCCATTTTGGATCTTTTTGAATCTATTGCAGAGGGGCATCAACCAAATTCGGGTTTTTTATTTGTCAACAAAATGAAAATGAAGCTTGGATGCAAGAAATGGAAATCAATTGCCCCTCGTTTGAAAGGAAAATCACCATCTCCCTCTTTTTGTCTATTTTCCAAAACTAAGTCAGTTAACTATGGTCCAGGCAAAACACCAGTTTATCTAAATGTGTACGATTTAACCCCTATGAATGGTTATGTCTATTGGGCAGGCCTGGGTATCTTTCACTCTGGTGTAGAAGTCCATGGTGTAGAATATGCATTTGGAGCTCATGACTATCCAACCAGTGGCGTTTTTGAAGTTGAGCCTCGACAATGCCCGGGTTTCAAGTTCAGGAGGTCAATATTGATTGGCACAACCTGCCTTGATCCTCATGAAGTCAGAGAGTTCATGGAGCAACGCTCTTCAAGCTACTATGGGGATACATATCACCTAATTGTCAAGAACTGCAATCATTTCTGCAGGGACGTCTGTCATCAGTTGACTGGAAAATCAATTCCAAAATGGGTAAATCGACTGGCTAAAATAGGTTCCGTTTGTAATTGCATACTTCCTGAGTCCCTTAGAATATCTGCCGTAAGACACGATCCCGCATACCCACCATACGAGACCGAGAAGACGAAGCTGAGGAATGCCTTCAGTTGCTTGTCTTCTATATCATCGCGGCAGAAGCAACTGTCTTCAACTTCATTATTTCTACAGTCGCCATTGAAAGGCTGGGAGTTGAAAAAATCCAGCAGTGAACCCTCATGCCTCAAAGGATAG ATGAAAGATGGGCTAAAAAGAGGGAGATTTTGGAGAAAAGCAATGCACGTGGTGGGAAGAGAAGGTATGGGAAAGGGTAAAATAATGAGACAACTTTCACTGTATCATCTTTCTCTCTCAAACTGTGGCTGTGGCCTTAGGCTCACCCACATTAATCAAATCAATCTGGTTTTGTTTCGGTTTGGTTTATGCCACTTTCTTTGCCTTCCTTTCCTTTCCCACTTCCATTATTATTCATCTAGCACAAGCTTTGAGAGCTACACACAGAGAGCGAGAGGCGGCCAAACGAGGATTTTAACCCTTGTTTCTGGCCCCTCTCACTCTTCTTCTTTTTCTTCCTCTCTCTTTGGGTTTCCCTCTTCTGGGTTTGCCTTTTTATTCTCCCTTGCCCAACCTGCTGCCTCATTTCGATGCCCCATTTTGGATCTTTTTGAATCTATTGCAGAGGGGCATCAACCAAATTCGGGTTTTTTATTTGTCAACAAAATGAAAATGAAGCTTGGATGCAAGAAATGGAAATCAATTGCCCCTCGTTTGAAAGGAAAATCACCATCTCCCTCTTTTTGTCTATTTTCCAAAACTAAGTCAGTTAACTATGGTCCAGGCAAAACACCAGTTTATCTAAATGTGTACGATTTAACCCCTATGAATGGTTATGTCTATTGGGCAGGCCTGGGTATCTTTCACTCTGGTGTAGAAGTCCATGGTGTAGAATATGCATTTGGAGCTCATGACTATCCAACCAGTGGCGTTTTTGAAGTTGAGCCTCGACAATGCCCGGGTTTCAAGTTCAGGAGGTCAATATTGATTGGCACAACCTGCCTTGATCCTCATGAAGTCAGAGAGTTCATGGAGCAACGCTCTTCAAGCTACTATGGGGATACATATCACCTAATTGTCAAGAACTGCAATCATTTCTGCAGGGACGTCTGTCATCAGTTGACTGGAAAATCAATTCCAAAATGGGTAAATCGACTGGCTAAAATAGGTTCCGTTTGTAATTGCATACTTCCTGAGTCCCTTAGAATATCTGCCGTAAGACACGATCCCGCATACCCACCATACGAGACCGAGAAGACGAAGCTGAGGAATGCCTTCAGTTGCTTGTCTTCTATATCATCGCGGCAGAAGCAACTGTCTTCAACTTCATTATTTCTACAGTCGCCATTGAAAGGCTGGGAGTTGAAAAAATCCAGCAGTGAACCCTCATGCCTCAAAGGATAG MKDGLKRGRFWRKAMHVVGREGMGKGKIMRQLSLYHLSLSNCGCGLRLTHINQINLVLFRFGLCHFLCLPFLSHFHYYSSSTSFESYTQRARGGQTRILTLVSGPSHSSSFSSSLFGFPSSGFAFLFSLAQPAASFRCPILDLFESIAEGHQPNSGFLFVNKMKMKLGCKKWKSIAPRLKGKSPSPSFCLFSKTKSVNYGPGKTPVYLNVYDLTPMNGYVYWAGLGIFHSGVEVHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRRSILIGTTCLDPHEVREFMEQRSSSYYGDTYHLIVKNCNHFCRDVCHQLTGKSIPKWVNRLAKIGSVCNCILPESLRISAVRHDPAYPPYETEKTKLRNAFSCLSSISSRQKQLSSTSLFLQSPLKGWELKKSSSEPSCLKG Homology
BLAST of Lsi08G014110 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 5.9e-60 Identity = 102/173 (58.96%), Postives = 127/173 (73.41%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.4e-31 Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 9.2e-29 Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.2e-28 Identity = 57/131 (43.51%), Postives = 82/131 (62.60%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy Swiss-Prot
Match: Q9BSY9 (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.6e-28 Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy TrEMBL
Match: A0A5A7VDI0 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005910 PE=3 SV=1) HSP 1 Score: 478.4 bits (1230), Expect = 3.0e-131 Identity = 226/244 (92.62%), Postives = 234/244 (95.90%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy TrEMBL
Match: A0A1S3BAZ7 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103487954 PE=3 SV=1) HSP 1 Score: 478.4 bits (1230), Expect = 3.0e-131 Identity = 226/244 (92.62%), Postives = 234/244 (95.90%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy TrEMBL
Match: A0A0A0LP93 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361480 PE=3 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 3.3e-130 Identity = 228/245 (93.06%), Postives = 236/245 (96.33%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy TrEMBL
Match: A0A6J1CT62 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111014061 PE=3 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 1.4e-125 Identity = 219/246 (89.02%), Postives = 230/246 (93.50%), Query Frame = 0
BLAST of Lsi08G014110 vs. ExPASy TrEMBL
Match: A0A6J1KMG7 (deSI-like protein At4g17486 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495949 PE=3 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 1.2e-121 Identity = 210/240 (87.50%), Postives = 224/240 (93.33%), Query Frame = 0
BLAST of Lsi08G014110 vs. NCBI nr
Match: XP_038884049.1 (deSI-like protein At4g17486 [Benincasa hispida]) HSP 1 Score: 507.7 bits (1306), Expect = 9.4e-140 Identity = 240/245 (97.96%), Postives = 242/245 (98.78%), Query Frame = 0
BLAST of Lsi08G014110 vs. NCBI nr
Match: XP_008444695.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis melo] >KAA0065250.1 deSI-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 478.4 bits (1230), Expect = 6.1e-131 Identity = 226/244 (92.62%), Postives = 234/244 (95.90%), Query Frame = 0
BLAST of Lsi08G014110 vs. NCBI nr
Match: XP_004152706.1 (deSI-like protein At4g17486 [Cucumis sativus] >XP_011649612.1 deSI-like protein At4g17486 [Cucumis sativus] >KGN62582.1 hypothetical protein Csa_022582 [Cucumis sativus]) HSP 1 Score: 474.9 bits (1221), Expect = 6.8e-130 Identity = 228/245 (93.06%), Postives = 236/245 (96.33%), Query Frame = 0
BLAST of Lsi08G014110 vs. NCBI nr
Match: XP_022144356.1 (deSI-like protein At4g17486 [Momordica charantia]) HSP 1 Score: 459.5 bits (1181), Expect = 2.9e-125 Identity = 219/246 (89.02%), Postives = 230/246 (93.50%), Query Frame = 0
BLAST of Lsi08G014110 vs. NCBI nr
Match: XP_023537193.1 (deSI-like protein At4g17486 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 447.2 bits (1149), Expect = 1.5e-121 Identity = 210/240 (87.50%), Postives = 224/240 (93.33%), Query Frame = 0
BLAST of Lsi08G014110 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 367.5 bits (942), Expect = 1.4e-101 Identity = 182/255 (71.37%), Postives = 211/255 (82.75%), Query Frame = 0
BLAST of Lsi08G014110 vs. TAIR 10
Match: AT1G47740.2 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 367.5 bits (942), Expect = 1.4e-101 Identity = 182/255 (71.37%), Postives = 211/255 (82.75%), Query Frame = 0
BLAST of Lsi08G014110 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 240.4 bits (612), Expect = 2.6e-63 Identity = 111/170 (65.29%), Postives = 128/170 (75.29%), Query Frame = 0
BLAST of Lsi08G014110 vs. TAIR 10
Match: AT5G47310.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 236.1 bits (601), Expect = 4.9e-62 Identity = 100/157 (63.69%), Postives = 124/157 (78.98%), Query Frame = 0
BLAST of Lsi08G014110 vs. TAIR 10
Match: AT4G17486.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 233.0 bits (593), Expect = 4.2e-61 Identity = 102/173 (58.96%), Postives = 127/173 (73.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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