Lsi08G013790 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G013790
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr08: 22080778 .. 22081617 (-)
RNA-Seq Expression	Lsi08G013790
Synteny	Lsi08G013790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTCAATGGATTCGATTCCGTCAAGGCGTTGAAGGACATTGCCATCGGGAATTACAGCCGCCGCCGGAAGCTCAAGTGGTTATTCGAGTTTTTTGTGTTCTTGTTCCTCGTTTCCCGCCGGTCCAGCTTGGTTTCTCTCGCCGGTCCGGTCCTCCGCCATTTTTTCCAGCGACTCCTCGTCATCCTCAACAGTCACATCTTCGTCTTCATGGTTTTCCACGCCATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCGGCCCGACGCCGAGTCCGGACGCGACGGCGATTCGGCGGAGAGTTTGGTGGCTCCGATTGACGATTCCGTCGCCGAGATATTAGTTGTCAGGGAGACAACGCCGGTGATCGGAGACTCAATCACTGAACCTTCGGCGGAGAAGAAGACGACGGAGCTGGTTGTCGCTACGGCGGAGGAGAGGACGACGGAACTGGTTATCGCTGCGGCGGAGGAGACGGCAACGGAACTGGTTATCGCTGCGGTGGAGGAGACGGCGACGGCGCCGTTAGCTCCGGCCTCTCCAGTCCGGCATTTGAACGCCGCGATGGAAACGGCGGAGATCGTACCGGAGACAAAACGCTATCGGAGGACGGAATCGGAGAGATTTGAAGAGAATCGGGAAATGAGCAAGTTCCGGCGATCGAAGACAGAGATTAGCCGGAGGGAAAGCGGCGGAGAAATGACGAGATTTTCTAATTCAGTGGACGAGTTGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTCATAGCGGAACAGAAAATGCACATCGGCGGAAGGGTGTCCGGCTAA

mRNA sequence

ATGGTTCTCAATGGATTCGATTCCGTCAAGGCGTTGAAGGACATTGCCATCGGGAATTACAGCCGCCGCCGGAAGCTCAAGTGGTTATTCGAGTTTTTTGTGTTCTTGTTCCTCGTTTCCCGCCGGTCCAGCTTGGTTTCTCTCGCCGGTCCGGTCCTCCGCCATTTTTTCCAGCGACTCCTCGTCATCCTCAACAGTCACATCTTCGTCTTCATGGTTTTCCACGCCATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCGGCCCGACGCCGAGTCCGGACGCGACGGCGATTCGGCGGAGAGTTTGGTGGCTCCGATTGACGATTCCGTCGCCGAGATATTAGTTGTCAGGGAGACAACGCCGGTGATCGGAGACTCAATCACTGAACCTTCGGCGGAGAAGAAGACGACGGAGCTGGTTGTCGCTACGGCGGAGGAGAGGACGACGGAACTGGTTATCGCTGCGGCGGAGGAGACGGCAACGGAACTGGTTATCGCTGCGGTGGAGGAGACGGCGACGGCGCCGTTAGCTCCGGCCTCTCCAGTCCGGCATTTGAACGCCGCGATGGAAACGGCGGAGATCGTACCGGAGACAAAACGCTATCGGAGGACGGAATCGGAGAGATTTGAAGAGAATCGGGAAATGAGCAAGTTCCGGCGATCGAAGACAGAGATTAGCCGGAGGGAAAGCGGCGGAGAAATGACGAGATTTTCTAATTCAGTGGACGAGTTGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTCATAGCGGAACAGAAAATGCACATCGGCGGAAGGGTGTCCGGCTAA

Coding sequence (CDS)

ATGGTTCTCAATGGATTCGATTCCGTCAAGGCGTTGAAGGACATTGCCATCGGGAATTACAGCCGCCGCCGGAAGCTCAAGTGGTTATTCGAGTTTTTTGTGTTCTTGTTCCTCGTTTCCCGCCGGTCCAGCTTGGTTTCTCTCGCCGGTCCGGTCCTCCGCCATTTTTTCCAGCGACTCCTCGTCATCCTCAACAGTCACATCTTCGTCTTCATGGTTTTCCACGCCATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCGGCCCGACGCCGAGTCCGGACGCGACGGCGATTCGGCGGAGAGTTTGGTGGCTCCGATTGACGATTCCGTCGCCGAGATATTAGTTGTCAGGGAGACAACGCCGGTGATCGGAGACTCAATCACTGAACCTTCGGCGGAGAAGAAGACGACGGAGCTGGTTGTCGCTACGGCGGAGGAGAGGACGACGGAACTGGTTATCGCTGCGGCGGAGGAGACGGCAACGGAACTGGTTATCGCTGCGGTGGAGGAGACGGCGACGGCGCCGTTAGCTCCGGCCTCTCCAGTCCGGCATTTGAACGCCGCGATGGAAACGGCGGAGATCGTACCGGAGACAAAACGCTATCGGAGGACGGAATCGGAGAGATTTGAAGAGAATCGGGAAATGAGCAAGTTCCGGCGATCGAAGACAGAGATTAGCCGGAGGGAAAGCGGCGGAGAAATGACGAGATTTTCTAATTCAGTGGACGAGTTGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTCATAGCGGAACAGAAAATGCACATCGGCGGAAGGGTGTCCGGCTAA

Protein sequence

MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDGDSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG

Homology

[Close]

BLAST of Lsi08G013790 vs. ExPASy TrEMBL
Match: A0A5A7VDR7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005550 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.6e-83
Identity = 196/280 (70.00%), Postives = 211/280 (75.36%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKALK I+IGNYSRRRKLKWLFEFFVFLFLVS RSS  SLAGP+L HFFQR+
Sbjct: 1   MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRI 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDGDSAESLVA-PIDDSV 120
           L +LNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNR +       DS+ESLVA P+D SV
Sbjct: 61  LAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEP------DSSESLVAPPVDVSV 120

Query: 121 AEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEE 180
            E     E  PVI DSI E                        A AEET TELVI AV++
Sbjct: 121 EE--KSTEEMPVIEDSIAE------------------------APAEET-TELVITAVDD 180

Query: 181 TATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRES 240
           TA  P  P+SPVRHLNA ME AEI+PE KRYRRTESERFEENRE SKFRRSKTEI  R +
Sbjct: 181 TAVLP--PSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNT 240

Query: 241 GGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG 280
             E+T F + VDE+DIDDFNRTVESFIAEQKMHIGGRVSG
Sbjct: 241 TAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG 245

[Close]

BLAST of Lsi08G013790 vs. ExPASy TrEMBL
Match: A0A0A0LNN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361830 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 2.0e-78
Identity = 186/280 (66.43%), Postives = 205/280 (73.21%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKALK I+IGNY RR KLKWLFEFFVFLFLVS RSS  SLAGP+L  FFQR+
Sbjct: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDGDSAESLVA-PIDDSV 120
           LV+LNSHIFVFMVFHAMLF+VYSLSHLTDNKSGSN  +       DS+ESLVA P+D SV
Sbjct: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEP------DSSESLVAPPVDVSV 120

Query: 121 AEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEE 180
            E     E  PVI DSI EP AE+             TTE+VI AA++TA          
Sbjct: 121 EE--KSTEEMPVIQDSIAEPPAEE-------------TTEMVITAADDTAV--------- 180

Query: 181 TATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRES 240
                L+P+ PV+HLNA ME AEI+ E KRYRRTESERFEEN+E  KFRR KTEI  RES
Sbjct: 181 -----LSPSPPVQHLNAVMEAAEIIAEAKRYRRTESERFEENQEKRKFRRWKTEIRWRES 240

Query: 241 GGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG 280
             E+T F   VDE+DIDDFNRTVESFIAEQKMHIGGRVSG
Sbjct: 241 REELTGFVELVDEMDIDDFNRTVESFIAEQKMHIGGRVSG 245

[Close]

BLAST of Lsi08G013790 vs. ExPASy TrEMBL
Match: A0A6J1KQJ8 (uncharacterized protein LOC111496300 OS=Cucurbita maxima OX=3661 GN=LOC111496300 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 6.5e-61
Identity = 156/286 (54.55%), Postives = 191/286 (66.78%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKA   I++ N  RRRKLKWLFEF +FLFLV  RSSL SLAGP  RHFF+R+
Sbjct: 1   MVLNGFDSVKA---ISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRI 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDG--------DSAESLV 120
           LV+LNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR + ES  D         +S ES++
Sbjct: 61  LVVLNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTEDESSLDARSSHVTADNSPESVI 120

Query: 121 APIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATEL 180
           A  DDSV + LVV +      +++  P         V  +  E+ TE    + +      
Sbjct: 121 ASKDDSVDDKLVVDKKNTTALENLAAP---------VDDSVAEKNTEKSSVSKD------ 180

Query: 181 VIAAVEETATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKT 240
              +++ T T    P SPV HL        I+PET++YRRTESERFE+NRE +K RRSKT
Sbjct: 181 ---SIDPTTTTAPTPGSPVLHL--------IIPETRQYRRTESERFEDNREKAKLRRSKT 240

Query: 241 EISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS 279
           EI RRE   E  + ++SV+E+DIDDFNR VESFIAEQK+HIGGR+S
Sbjct: 241 EI-RREESRESKKLTDSVEEMDIDDFNRKVESFIAEQKLHIGGRIS 256

[Close]

BLAST of Lsi08G013790 vs. ExPASy TrEMBL
Match: A0A6J1CSG5 (uncharacterized protein LOC111013908 OS=Momordica charantia OX=3673 GN=LOC111013908 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 6.0e-59
Identity = 159/286 (55.59%), Postives = 187/286 (65.38%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKA   I +GN++RRRKLKWLFE  VFLFL+SRRS+  S A PVLRHFF++L
Sbjct: 1   MVLNGFDSVKA---IPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQL 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDA---ESGRDGDSAESLVAPIDD 120
           + +LNSHIFVFM F+ MLFVVYSLS LT+ K  SNR DA        G+S ESLVAP DD
Sbjct: 61  VAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSHGNATGESPESLVAPSDD 120

Query: 121 SVAEILVVRE----TTPVIGDSI-TEPSAEKKTTELVVATAEERTTELVIAAAEETATEL 180
           S+AEILVV E    T+PV G +I   P+AE  T ++                        
Sbjct: 121 SIAEILVVAEKNVVTSPVDGVAIAATPAAELPTEQM------------------------ 180

Query: 181 VIAAVEETATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKT 240
                   +  P+ PA     +  A E  EI+PETK+YRRTESERF E RE +KFRRSKT
Sbjct: 181 ---PFPSPSPPPIXPAPNSTSVTEAAE--EIIPETKQYRRTESERFAERREENKFRRSKT 240

Query: 241 EISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS 279
           EI RRES  E  RF  SV E+DI+DFNRTVESFIAEQK+HIG  +S
Sbjct: 241 EI-RRESSEEPARFVRSVHEMDIEDFNRTVESFIAEQKLHIGRWIS 253

[Close]

BLAST of Lsi08G013790 vs. ExPASy TrEMBL
Match: W9SC28 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021937 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.2e-10
Identity = 89/274 (32.48%), Postives = 127/274 (46.35%), Query Frame = 0


Query: 7   DSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSL-VSLAGPVLRHFFQRLLVILN 66
           D+VKA KD+AI    R RK KW  E    LFL++  S+  + +AG       + ++ +  
Sbjct: 36  DNVKAEKDLAIRKSRRERKFKWFLEACAVLFLLAHSSAYWLPIAGEFSGDLLREIVSVFR 95

Query: 67  SHIFVFMVFHAMLFVVYSLS---HLTDNKSGSNRPDAESGRDGDSAESLVAPIDDSVAEI 126
           SH+FVF +F+A++  VY+LS   H++ N +GS +PD                 D+ V   
Sbjct: 96  SHLFVFALFNAIIVAVYALSGKIHIS-NDAGSEQPDL---------------YDEFVTNS 155

Query: 127 LVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETAT 186
             VR   P + DS   P  E          AEE+T     A A           VE    
Sbjct: 156 ESVRR-IPAVNDS---PPPE-------TCPAEEKTVSSENADAS--------TPVENRND 215

Query: 187 APLAPASP-VRHLNAAMETAEIVPETKRYRRTESERFEENR---EMSKFRRSKTEISRR- 246
           A   P  P V   +       +V   K Y RT+S RFE  R      +FRRS T++ R+ 
Sbjct: 216 AKRNPKKPEVSDCDCTNNEKALV---KSYERTQSVRFERKRMDQSQREFRRSYTDVYRKL 271

Query: 247 -ESGGEMTRFSNSVDELDIDDFNRTVESFIAEQK 271
              G E  + S  V++L  ++FNRT+E+FIA QK
Sbjct: 276 TSCGEEEAKKSRKVNQLSNEEFNRTIEAFIAAQK 271

[Close]

BLAST of Lsi08G013790 vs. NCBI nr
Match: KAA0065217.1 (uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 3.3e-83
Identity = 196/280 (70.00%), Postives = 211/280 (75.36%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKALK I+IGNYSRRRKLKWLFEFFVFLFLVS RSS  SLAGP+L HFFQR+
Sbjct: 1   MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRI 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDGDSAESLVA-PIDDSV 120
           L +LNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNR +       DS+ESLVA P+D SV
Sbjct: 61  LAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEP------DSSESLVAPPVDVSV 120

Query: 121 AEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEE 180
            E     E  PVI DSI E                        A AEET TELVI AV++
Sbjct: 121 EE--KSTEEMPVIEDSIAE------------------------APAEET-TELVITAVDD 180

Query: 181 TATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRES 240
           TA  P  P+SPVRHLNA ME AEI+PE KRYRRTESERFEENRE SKFRRSKTEI  R +
Sbjct: 181 TAVLP--PSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNT 240

Query: 241 GGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG 280
             E+T F + VDE+DIDDFNRTVESFIAEQKMHIGGRVSG
Sbjct: 241 TAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG 245

[Close]

BLAST of Lsi08G013790 vs. NCBI nr
Match: XP_011650191.1 (uncharacterized protein LOC105434756 [Cucumis sativus] >KGN62619.1 hypothetical protein Csa_021847 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 4.1e-78
Identity = 186/280 (66.43%), Postives = 205/280 (73.21%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKALK I+IGNY RR KLKWLFEFFVFLFLVS RSS  SLAGP+L  FFQR+
Sbjct: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDGDSAESLVA-PIDDSV 120
           LV+LNSHIFVFMVFHAMLF+VYSLSHLTDNKSGSN  +       DS+ESLVA P+D SV
Sbjct: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEP------DSSESLVAPPVDVSV 120

Query: 121 AEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEE 180
            E     E  PVI DSI EP AE+             TTE+VI AA++TA          
Sbjct: 121 EE--KSTEEMPVIQDSIAEPPAEE-------------TTEMVITAADDTAV--------- 180

Query: 181 TATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRES 240
                L+P+ PV+HLNA ME AEI+ E KRYRRTESERFEEN+E  KFRR KTEI  RES
Sbjct: 181 -----LSPSPPVQHLNAVMEAAEIIAEAKRYRRTESERFEENQEKRKFRRWKTEIRWRES 240

Query: 241 GGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG 280
             E+T F   VDE+DIDDFNRTVESFIAEQKMHIGGRVSG
Sbjct: 241 REELTGFVELVDEMDIDDFNRTVESFIAEQKMHIGGRVSG 245

[Close]

BLAST of Lsi08G013790 vs. NCBI nr
Match: KAG6585580.1 (hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249.6 bits (636), Expect = 3.2e-62
Identity = 164/286 (57.34%), Postives = 191/286 (66.78%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKA   I++ N  RRRKLKWLFEF +FLFLV  RSSL SLAGP  RHFF+R+
Sbjct: 1   MVLNGFDSVKA---ISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRI 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDG--------DSAESLV 120
           LV+LNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR DAES  D         DS ESL+
Sbjct: 61  LVVLNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTDAESTLDARSSHVTADDSPESLI 120

Query: 121 APIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATEL 180
           A  DDSV + LVV E         T  + E     +  + AE+ T +  ++      T  
Sbjct: 121 ASKDDSVDDKLVVDEKN-------TATALENSAAPVDDSVAEKNTEKSPVSKDSIDPT-- 180

Query: 181 VIAAVEETATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKT 240
                  T TAP  P SPV HL        I+PET++YRRTESERFEENR+ +K RRSKT
Sbjct: 181 ------TTTTAP-TPGSPVLHL--------IIPETRQYRRTESERFEENRQRAKLRRSKT 240

Query: 241 EISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS 279
           EI RRE   E T+  +SV+E+DIDDFNR VE FIAEQK+HIGGR+S
Sbjct: 241 EI-RREESRESTKLRDSVEEMDIDDFNRKVERFIAEQKLHIGGRIS 258

[Close]

BLAST of Lsi08G013790 vs. NCBI nr
Match: KAG7020495.1 (hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.8 bits (634), Expect = 5.4e-62
Identity = 162/286 (56.64%), Postives = 190/286 (66.43%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKA   I++ N  RRRKLKWLFEF +FLFLV  RSSL SLAGP  RHFF+R+
Sbjct: 1   MVLNGFDSVKA---ISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRI 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDG--------DSAESLV 120
           LV+LNSH FVF++FHAMLFVVYSLSH TDN SGSNR DAES  D         DS ESL+
Sbjct: 61  LVVLNSHTFVFIIFHAMLFVVYSLSHSTDNNSGSNRTDAESTLDARSSHVTADDSPESLI 120

Query: 121 APIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATEL 180
           A  DDSV + LVV E         T  + E     +  + AE+ T +         + + 
Sbjct: 121 ASKDDSVDDKLVVDEKN-------TATALENSAAPVDDSVAEKNTEK------SPVSKDS 180

Query: 181 VIAAVEETATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKT 240
           +      T TAP  P SPV HL        I+PET++YRRTESERFEENRE +K RRSKT
Sbjct: 181 IDPTTTTTTTAP-TPVSPVLHL--------IIPETRQYRRTESERFEENRERAKLRRSKT 240

Query: 241 EISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS 279
           EI RRE   E T+  +SV+E+DIDDFNR VE FIAEQK+HIGGR+S
Sbjct: 241 EI-RREESRESTKLRDSVEEMDIDDFNRKVERFIAEQKLHIGGRIS 260

[Close]

BLAST of Lsi08G013790 vs. NCBI nr
Match: XP_023002474.1 (uncharacterized protein LOC111496300 [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-60
Identity = 156/286 (54.55%), Postives = 191/286 (66.78%), Query Frame = 0


Query: 1   MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRL 60
           MVLNGFDSVKA   I++ N  RRRKLKWLFEF +FLFLV  RSSL SLAGP  RHFF+R+
Sbjct: 1   MVLNGFDSVKA---ISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRI 60

Query: 61  LVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDG--------DSAESLV 120
           LV+LNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR + ES  D         +S ES++
Sbjct: 61  LVVLNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTEDESSLDARSSHVTADNSPESVI 120

Query: 121 APIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATEL 180
           A  DDSV + LVV +      +++  P         V  +  E+ TE    + +      
Sbjct: 121 ASKDDSVDDKLVVDKKNTTALENLAAP---------VDDSVAEKNTEKSSVSKD------ 180

Query: 181 VIAAVEETATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKT 240
              +++ T T    P SPV HL        I+PET++YRRTESERFE+NRE +K RRSKT
Sbjct: 181 ---SIDPTTTTAPTPGSPVLHL--------IIPETRQYRRTESERFEDNREKAKLRRSKT 240

Query: 241 EISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS 279
           EI RRE   E  + ++SV+E+DIDDFNR VESFIAEQK+HIGGR+S
Sbjct: 241 EI-RREESRESKKLTDSVEEMDIDDFNRKVESFIAEQKLHIGGRIS 256

The following BLAST results are available for this feature:

BLAST of Lsi08G013790 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G013790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDR7	1.6e-83	70.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LNN4	2.0e-78	66.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361830 PE=4 SV=1	[more]
A0A6J1KQJ8	6.5e-61	54.55	uncharacterized protein LOC111496300 OS=Cucurbita maxima OX=3661 GN=LOC111496300...	[more]
A0A6J1CSG5	6.0e-59	55.59	uncharacterized protein LOC111013908 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
W9SC28	5.2e-10	32.48	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021937 PE=4 SV=1	[more]

BLAST of Lsi08G013790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065217.1	3.3e-83	70.00	uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa]	[more]
XP_011650191.1	4.1e-78	66.43	uncharacterized protein LOC105434756 [Cucumis sativus] >KGN62619.1 hypothetical ...	[more]
KAG6585580.1	3.2e-62	57.34	hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7020495.1	5.4e-62	56.64	hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023002474.1	1.3e-60	54.55	uncharacterized protein LOC111496300 [Cucurbita maxima]	[more]

BLAST of Lsi08G013790 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..245
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 7..272
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 7..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G013790.1	Lsi08G013790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane