Lsi08G013660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G013660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	26S proteasome regulatory subunit S10B homolog B
Location	chr08: 21968171 .. 21971064 (+)
RNA-Seq Expression	Lsi08G013660
Synteny	Lsi08G013660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGAGAATTTACGAGGTGCAAAGAAAGAATTTAACAAGACGGAAGATGATTTGAAGTCCCTGCAAAGTGTTGGTCAAATTATTGGAGAAGTTCTCAGGCCGCTTGACAATGAACGCTGTACTTCTTCTTACTCCCTGAATTTCTTTTAAGATGAAGTTCTCTCAAATTGGTTGGTAATGTTGGATTATCGTTGCCTTTGTGATTTCAGTGATTGTCAAAGCAAGCAGTGGACCAAGATATGTGGTTGGATGCCGTAATAAGGTGGATAAGGATAAATTGACTTCTGGTACTAGAGTGGTACTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAAGTTAGATTTTTGTTTAAATGATTATAAAGGAAAATAAGAAATAGGTACTATCCTTTGATGCACGATTGTCCTAAATGTTTATATCTAATTTGATCTGATAGGTAGATCCAGTTGTGTATAATATGTTGCATGAAGATCCTGGTAATGTTAGCTATTCTGCTGTGGGTGGTTTGTCTGATCAAATTAGAGAATTGAGGGAGTCTATCGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGGTATCAAACCTCCCAAGGTACTATCTCTCTCTCTCTTTGATGGGATTTGATTACCAAATTTTAGTTTTCTAGTTTTTGCTCTACAAATTACTTGCACTGCACCAGATTCGTCCTCCCTCTTTTACTCACATTATTTGTTTACTTTTCACTTAAAGGGTGTGCTCCTATACGGTCCTCCTGGTACCGGCAAGACATTGCTGGCAAGAGCAATTGCGAGTAACATAGATGCCAACTTCTTAAAGGTTGAATTTTCTCCATGTACTGAAATGACTTTAATATTCCCCATTTTCCCAGCTAATCTATAACTACCAGCTTCTGTCTTCTCTTTATTGAAGTATAGGTTGTATCAAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCAAGGTTAATACGTGAGATGTTTGGATATGCACGTGATCACCAGGTAAGTTCTTAAGTGGTATGAACTTCTCTTTGTATGATTCTATTAGGAAAGGTGTTTCATAACTCATGCACCATTCCTTTCTGTGCTTAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAGGGAACAAGCGCAGATCGTGAAATTCAGCGAACATTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAGCTTGGCAAGGTATGTCTGGATTTGTTCTCTTGGTTTTAAAGGAAAAATGATCTTCTCATGGACATCCTATCCAGATTTCGACCCAATCTAGATTTTGATTGTTGTCTTGAAATTAAAGGTGTATTTGGATATTCAAATATCCAACATTCCTACGAACCCGATCCAGATACCCAACAAAATGATGGGTGTTTTGAATATTCATCTCATTGGGCCAAATGGGTTTGTAGCCTAGTTGATTCATTTTGTTGGCTGTCACTTTAGCCATTCCATCGTGGCCATGGTTTGAATCTGGTAATTGGTATGGGGTTCGGGGTTTAGTTGAATATTTATCTCATCGGGAATCTGACAATGCCATCTTTGGCCTTTTCCTTCCAACATGTTTCAACGGCATCTTTTGATATTTCTATATGCAAGGATACCTATAAATATCAGTATCCATGCGCCCATCAAAATGACTGGTGTTATCAATTTTTATGTCATGGAGAATCTGGTGTTATCAATTTTCAATTTTCGATATGCAAGGAATCTCTCTTTCTCTTTACTCAAATATATAGTTTTGTATAATGTTTACATGTTTATATATGAATGTTTACCCCCTTCTGATTGATATATAAGAATTTTACTCTCTTCTCGGTATACTGAATTCCCAAAGGTGGTGGAGACCTGAGGGCTGTTCTCCTTACATTAACTAGCAAGGGATAGACAGAAAATAAAAGTTTACGTTAGTGGCTAAATGCCAGAAATGTGTTCATTCTTTTTCCAAATTTGTTTTTTTATTCGCCTGTGTTGATATCAATCCTGAAAGGTTGTGGAGACTGGAGGACAATACTCCTTGCAGTAACTAATCTGGAAGTCAGTGGCCAAATACCAAGAATGTGTTCATTCTTTTTCTAATTTTGGTCGTATTTACCTGTGTAACTAGTAAAAGCAGAAAATGTAAAGTCTTAGATCTTGTTGTTGATGCCGGCCATGCTAAGAGTCTAAGACTTAACTGTTTGTCTTATAGATCTTATTTGGATATTTTTACAAACATTTTGTTTTCTGAGCAAAAAATTATTGACTTGAAACCGGCACTGTAGGTCAAAATGATAATGGCCACAAACAGGCCCGATGTTCTTGACCCTGCACTTCTTCGACCAGGGCGATTGGACCGCAAAATAGAGATTCCCCTGCCAAATGAGCAGTCCAGAATGGAGATCCTTAAGATTCATGCGGCTGGCATTGCCAAGCATGGTGAGATTGATTATGAAGCTGTTGTGAAGCTTGCAGAGGTAATCCTGCTGGTTCTTTTTTATTCATTTTCTTTCTAGTTGTATCCACAATCTATGCATGCTTGAAACTGTCATTCGTCTAGGGCTTCAATGGAGCTGATTTGCGAAATGTGTGCACCGAAGCTGGAATGTCAGCTATCCGTGCCGAACGTGACTATGTCATCCATGAAGATTTCATGAAGGTAATCTCAAATTAATTTCTCTAGCAGTGTATAGCATACTCTTTATCATGTTGAGATTAATTGGTTTCTACAGGCAGAAGGTTCTTTCTTCCCATTCTCACTTTTATCATCTTTTGATGTTCAGGCAGTACGAAAATTGAATGAAGCCAAGAAACTCGAGTCCAGCGCACACTACAGTGCTGATTTTGGAAAAGACTGA

mRNA sequence

AGGGAGAATTTACGAGGTGCAAAGAAAGAATTTAACAAGACGGAAGATGATTTGAAGTCCCTGCAAAGTGTTGGTCAAATTATTGGAGAAGTTCTCAGGCCGCTTGACAATGAACGCTTGATTGTCAAAGCAAGCAGTGGACCAAGATATGTGGTTGGATGCCGTAATAAGGTGGATAAGGATAAATTGACTTCTGGTACTAGAGTGGTACTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAGATCCAGTTGTGTATAATATGTTGCATGAAGATCCTGGTAATGTTAGCTATTCTGCTGTGGGTGGTTTGTCTGATCAAATTAGAGAATTGAGGGAGTCTATCGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGTTTTTGCTCTACAAATTACTTGCACTGCACCAGATTCGTCCTCCCTCTTTTACTCACATTATTTGTTTACTTTTCACTTAAAGGGTGTGCTCCTATACGGTCCTCCTGGTACCGGCAAGACATTGCTGGCAAGAGCAATTGCGAGTAACATAGATGCCAACTTCTTAAAGGTTGTATCAAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCAAGGTTAATACGTGAGATGTTTGGATATGCACGTGATCACCAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAGGGAACAAGCGCAGATCGTGAAATTCAGCGAACATTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAGCTTGGCAAGGTGTATTTGGATATTCAAATATCCAACATTCCTACGAACCCGATCCAGATACCCAACAAAATGATGGGTGTTTTGAATATTCATCTCATTGGGCCAAATGGGCCCGATGTTCTTGACCCTGCACTTCTTCGACCAGGGCGATTGGACCGCAAAATAGAGATTCCCCTGCCAAATGAGCAGTCCAGAATGGAGATCCTTAAGATTCATGCGGCTGGCATTGCCAAGCATGGTGAGATTGATTATGAAGCTGTTGTGAAGCTTGCAGAGGGCTTCAATGGAGCTGATTTGCGAAATGTGTGCACCGAAGCTGGAATGTCAGCTATCCGTGCCGAACGTGACTATGTCATCCATGAAGATTTCATGAAGGCAGTACGAAAATTGAATGAAGCCAAGAAACTCGAGTCCAGCGCACACTACAGTGCTGATTTTGGAAAAGACTGA

Coding sequence (CDS)

AGGGAGAATTTACGAGGTGCAAAGAAAGAATTTAACAAGACGGAAGATGATTTGAAGTCCCTGCAAAGTGTTGGTCAAATTATTGGAGAAGTTCTCAGGCCGCTTGACAATGAACGCTTGATTGTCAAAGCAAGCAGTGGACCAAGATATGTGGTTGGATGCCGTAATAAGGTGGATAAGGATAAATTGACTTCTGGTACTAGAGTGGTACTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAGATCCAGTTGTGTATAATATGTTGCATGAAGATCCTGGTAATGTTAGCTATTCTGCTGTGGGTGGTTTGTCTGATCAAATTAGAGAATTGAGGGAGTCTATCGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGTTTTTGCTCTACAAATTACTTGCACTGCACCAGATTCGTCCTCCCTCTTTTACTCACATTATTTGTTTACTTTTCACTTAAAGGGTGTGCTCCTATACGGTCCTCCTGGTACCGGCAAGACATTGCTGGCAAGAGCAATTGCGAGTAACATAGATGCCAACTTCTTAAAGGTTGTATCAAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCAAGGTTAATACGTGAGATGTTTGGATATGCACGTGATCACCAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAGGGAACAAGCGCAGATCGTGAAATTCAGCGAACATTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAGCTTGGCAAGGTGTATTTGGATATTCAAATATCCAACATTCCTACGAACCCGATCCAGATACCCAACAAAATGATGGGTGTTTTGAATATTCATCTCATTGGGCCAAATGGGCCCGATGTTCTTGACCCTGCACTTCTTCGACCAGGGCGATTGGACCGCAAAATAGAGATTCCCCTGCCAAATGAGCAGTCCAGAATGGAGATCCTTAAGATTCATGCGGCTGGCATTGCCAAGCATGGTGAGATTGATTATGAAGCTGTTGTGAAGCTTGCAGAGGGCTTCAATGGAGCTGATTTGCGAAATGTGTGCACCGAAGCTGGAATGTCAGCTATCCGTGCCGAACGTGACTATGTCATCCATGAAGATTTCATGAAGGCAGTACGAAAATTGAATGAAGCCAAGAAACTCGAGTCCAGCGCACACTACAGTGCTGATTTTGGAAAAGACTGA

Protein sequence

RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD

Homology

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BLAST of Lsi08G013660 vs. ExPASy Swiss-Prot
Match: Q9SEI3 (26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT4A PE=1 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 9.5e-183
Identity = 337/411 (82.00%), Postives = 351/411 (85.40%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK
Sbjct: 36  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 95

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           +KLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESI
Sbjct: 96  EKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESI 155

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 156 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 215

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 216 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 275

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFD LGKV +                         ++  N P
Sbjct: 276 SADREIQRTLMELLNQLDGFDNLGKVKM-------------------------IMATNRP 335

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRM+ILKIHAAGIAKHGEIDYEA+VKLAEGFNGAD
Sbjct: 336 DVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGAD 395

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRN+CTEAGM AIRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 396 LRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Lsi08G013660 vs. ExPASy Swiss-Prot
Match: Q9MAK9 (26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702 GN=RPT4B PE=1 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 3.6e-182
Identity = 336/411 (81.75%), Postives = 350/411 (85.16%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLR AKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK
Sbjct: 36  RENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 95

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           +KLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESI
Sbjct: 96  EKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESI 155

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 156 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 215

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 216 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 275

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 276 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 335

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA+GIAKHGEIDYEA+VKL EGFNGAD
Sbjct: 336 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGAD 395

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRN+CTEAGM AIRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 396 LRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Lsi08G013660 vs. ExPASy Swiss-Prot
Match: P62333 (26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 3.8e-147
Identity = 272/404 (67.33%), Postives = 309/404 (76.49%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L  E+ IVKA++GPRYVVGCR ++DK
Sbjct: 30  REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
            KL  GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE I
Sbjct: 90  SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVI 149

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPL NPELF RV                           KG LLYGPPGTGKTLLARA+
Sbjct: 150 ELPLTNPELFQRVGI----------------------IPPKGCLLYGPPGTGKTLLARAV 209

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 210 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 269

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQ+DGFD L +V +                         ++  N P
Sbjct: 270 SADREIQRTLMELLNQMDGFDTLHRVKM-------------------------IMATNRP 329

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           D LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA  I KHGEIDYEA+VKL++GFNGAD
Sbjct: 330 DTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGAD 386

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 405
           LRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES   Y
Sbjct: 390 LRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Lsi08G013660 vs. ExPASy Swiss-Prot
Match: P62335 (26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 3.8e-147
Identity = 272/404 (67.33%), Postives = 309/404 (76.49%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L  E+ IVKA++GPRYVVGCR ++DK
Sbjct: 30  REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
            KL  GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE I
Sbjct: 90  SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVI 149

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPL NPELF RV                           KG LLYGPPGTGKTLLARA+
Sbjct: 150 ELPLTNPELFQRVGI----------------------IPPKGCLLYGPPGTGKTLLARAV 209

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 210 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 269

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQ+DGFD L +V +                         ++  N P
Sbjct: 270 SADREIQRTLMELLNQMDGFDTLHRVKM-------------------------IMATNRP 329

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           D LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA  I KHGEIDYEA+VKL++GFNGAD
Sbjct: 330 DTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGAD 386

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 405
           LRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES   Y
Sbjct: 390 LRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Lsi08G013660 vs. ExPASy Swiss-Prot
Match: P62334 (26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 3.8e-147
Identity = 272/404 (67.33%), Postives = 309/404 (76.49%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L  E+ IVKA++GPRYVVGCR ++DK
Sbjct: 30  REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
            KL  GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE I
Sbjct: 90  SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVI 149

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPL NPELF RV                           KG LLYGPPGTGKTLLARA+
Sbjct: 150 ELPLTNPELFQRVGI----------------------IPPKGCLLYGPPGTGKTLLARAV 209

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 210 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 269

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQ+DGFD L +V +                         ++  N P
Sbjct: 270 SADREIQRTLMELLNQMDGFDTLHRVKM-------------------------IMATNRP 329

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           D LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA  I KHGEIDYEA+VKL++GFNGAD
Sbjct: 330 DTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGAD 386

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 405
           LRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ ++KKLES   Y
Sbjct: 390 LRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Lsi08G013660 vs. ExPASy TrEMBL
Match: A0A5A7VH84 (26S protease regulatory subunit S10B-like protein B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005420 PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.9e-186
Identity = 351/411 (85.40%), Postives = 355/411 (86.37%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK
Sbjct: 85  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 144

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 145 DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 204

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 205 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 264

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 265 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 324

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 325 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 384

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 385 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 444

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYV+HEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 445 LRNVCTEAGMSAIRAERDYVVHEDFMKAVRKLNEAKKLESSAHYSADFGKD 448

[Close]

BLAST of Lsi08G013660 vs. ExPASy TrEMBL
Match: A0A0A0LL40 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362430 PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.9e-186
Identity = 351/411 (85.40%), Postives = 355/411 (86.37%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK
Sbjct: 35  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 94

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGLSDQIRELRESI
Sbjct: 95  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESI 154

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 155 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 214

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 215 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 274

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 275 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 334

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 335 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 394

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 395 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013660 vs. ExPASy TrEMBL
Match: A0A1S3BB45 (26S protease regulatory subunit S10B homolog B-like OS=Cucumis melo OX=3656 GN=LOC103488000 PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.9e-186
Identity = 351/411 (85.40%), Postives = 355/411 (86.37%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK
Sbjct: 35  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 94

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 95  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 154

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 155 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 214

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 215 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 274

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 275 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 334

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 335 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 394

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYV+HEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 395 LRNVCTEAGMSAIRAERDYVVHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013660 vs. ExPASy TrEMBL
Match: A0A0D2UQM3 (AAA domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_009G198900 PE=3 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 7.3e-186
Identity = 350/411 (85.16%), Postives = 360/411 (87.59%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLR AKK+FNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK
Sbjct: 35  RENLRAAKKDFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 94

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           +KLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 95  EKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 154

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 155 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 214

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 215 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 274

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV+                N +M ++ + ++  N P
Sbjct: 275 SADREIQRTLMELLNQLDGFDQLGKVH----------------NLVMSMVKM-IMATNRP 334

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 335 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 394

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 395 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 406

[Close]

BLAST of Lsi08G013660 vs. ExPASy TrEMBL
Match: A0A7J8SBS9 (AAA domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_008977 PE=3 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.8e-185
Identity = 351/414 (84.78%), Postives = 361/414 (87.20%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLR AKK+FNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK
Sbjct: 2   RENLRAAKKDFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 61

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           +KLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 62  EKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 121

Query: 121 ELPLMNPELFLRVVF---ALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLA 180
           ELPLMNPELFLRV      + IT + P S +  +          GVLLYGPPGTGKTLLA
Sbjct: 122 ELPLMNPELFLRVGIKPPKVIITSSLPLSVNSEFQW--------GVLLYGPPGTGKTLLA 181

Query: 181 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 240
           RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS
Sbjct: 182 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 241

Query: 241 EGTSADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGP 300
           EGTSADREIQRTLMELLNQLDGFDQLGKV +                         ++  
Sbjct: 242 EGTSADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMAT 301

Query: 301 NGPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFN 360
           N PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFN
Sbjct: 302 NRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFN 361

Query: 361 GADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           GADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 362 GADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 382

[Close]

BLAST of Lsi08G013660 vs. NCBI nr
Match: XP_038886580.1 (26S proteasome regulatory subunit S10B homolog B-like [Benincasa hispida])

HSP 1 Score: 662.1 bits (1707), Expect = 3.0e-186
Identity = 352/411 (85.64%), Postives = 355/411 (86.37%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK
Sbjct: 35  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 94

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 95  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 154

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 155 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 214

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 215 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 274

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 275 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 334

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 335 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 394

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 395 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013660 vs. NCBI nr
Match: KAA0065205.1 (26S protease regulatory subunit S10B-like protein B-like [Cucumis melo var. makuwa])

HSP 1 Score: 661.8 bits (1706), Expect = 3.9e-186
Identity = 351/411 (85.40%), Postives = 355/411 (86.37%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK
Sbjct: 85  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 144

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 145 DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 204

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 205 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 264

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 265 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 324

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 325 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 384

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 385 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 444

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYV+HEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 445 LRNVCTEAGMSAIRAERDYVVHEDFMKAVRKLNEAKKLESSAHYSADFGKD 448

[Close]

BLAST of Lsi08G013660 vs. NCBI nr
Match: XP_008444753.1 (PREDICTED: 26S protease regulatory subunit S10B homolog B-like [Cucumis melo])

HSP 1 Score: 661.8 bits (1706), Expect = 3.9e-186
Identity = 351/411 (85.40%), Postives = 355/411 (86.37%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK
Sbjct: 35  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 94

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 95  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 154

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 155 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 214

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 215 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 274

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 275 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 334

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 335 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 394

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYV+HEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 395 LRNVCTEAGMSAIRAERDYVVHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013660 vs. NCBI nr
Match: XP_004152679.1 (26S proteasome regulatory subunit S10B homolog B [Cucumis sativus] >KGN62630.1 hypothetical protein Csa_022224 [Cucumis sativus])

HSP 1 Score: 661.8 bits (1706), Expect = 3.9e-186
Identity = 351/411 (85.40%), Postives = 355/411 (86.37%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK
Sbjct: 35  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 94

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGLSDQIRELRESI
Sbjct: 95  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESI 154

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 155 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 214

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 215 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 274

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 275 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 334

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 335 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 394

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 395 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013660 vs. NCBI nr
Match: KJB58200.1 (hypothetical protein B456_009G198900 [Gossypium raimondii])

HSP 1 Score: 659.8 bits (1701), Expect = 1.5e-185
Identity = 350/411 (85.16%), Postives = 360/411 (87.59%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLR AKK+FNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK
Sbjct: 35  RENLRAAKKDFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 94

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           +KLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 95  EKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 154

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 155 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 214

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 215 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 274

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV+                N +M ++ + ++  N P
Sbjct: 275 SADREIQRTLMELLNQLDGFDQLGKVH----------------NLVMSMVKM-IMATNRP 334

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD
Sbjct: 335 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 394

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 395 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 406

[Close]

BLAST of Lsi08G013660 vs. TAIR 10
Match: AT5G43010.1 (regulatory particle triple-A ATPase 4A )

HSP 1 Score: 641.0 bits (1652), Expect = 6.7e-184
Identity = 337/411 (82.00%), Postives = 351/411 (85.40%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK
Sbjct: 36  RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 95

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           +KLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESI
Sbjct: 96  EKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESI 155

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 156 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 215

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 216 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 275

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFD LGKV +                         ++  N P
Sbjct: 276 SADREIQRTLMELLNQLDGFDNLGKVKM-------------------------IMATNRP 335

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRM+ILKIHAAGIAKHGEIDYEA+VKLAEGFNGAD
Sbjct: 336 DVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGAD 395

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRN+CTEAGM AIRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 396 LRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Lsi08G013660 vs. TAIR 10
Match: AT1G45000.1 (AAA-type ATPase family protein )

HSP 1 Score: 639.0 bits (1647), Expect = 2.6e-183
Identity = 336/411 (81.75%), Postives = 350/411 (85.16%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLR AKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK
Sbjct: 36  RENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 95

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           +KLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESI
Sbjct: 96  EKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESI 155

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 156 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 215

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 216 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 275

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGKV +                         ++  N P
Sbjct: 276 SADREIQRTLMELLNQLDGFDQLGKVKM-------------------------IMATNRP 335

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
           DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA+GIAKHGEIDYEA+VKL EGFNGAD
Sbjct: 336 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGAD 395

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRN+CTEAGM AIRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 396 LRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Lsi08G013660 vs. TAIR 10
Match: AT1G45000.2 (AAA-type ATPase family protein )

HSP 1 Score: 506.5 bits (1303), Expect = 2.0e-143
Identity = 282/411 (68.61%), Postives = 291/411 (70.80%), Query Frame = 0


Query: 1   RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK 60
           RENLR AKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK
Sbjct: 36  RENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 95

Query: 61  DKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 120
           +KLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESI
Sbjct: 96  EKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESI 155

Query: 121 ELPLMNPELFLRVVFALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAI 180
           ELPLMNPELFLRV                           KGVLLYGPPGTGKTLLARAI
Sbjct: 156 ELPLMNPELFLRVGIKPP----------------------KGVLLYGPPGTGKTLLARAI 215

Query: 181 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 240
           ASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 216 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 275

Query: 241 SADREIQRTLMELLNQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGP 300
           SADREIQRTLMELLNQLDGFDQLGK                                   
Sbjct: 276 SADREIQRTLMELLNQLDGFDQLGK----------------------------------- 335

Query: 301 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD 360
                                                                 GFNGAD
Sbjct: 336 ------------------------------------------------------GFNGAD 335

Query: 361 LRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 412
           LRN+CTEAGM AIRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 396 LRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 335

[Close]

BLAST of Lsi08G013660 vs. TAIR 10
Match: AT5G20000.1 (AAA-type ATPase family protein )

HSP 1 Score: 285.4 bits (729), Expect = 7.2e-77
Identity = 160/378 (42.33%), Postives = 221/378 (58.47%), Query Frame = 0


Query: 16  DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTT 75
           ++L+ LQ  G  +GEV++ +   +++VK     +YVV     +D  KLT  TRV L   +
Sbjct: 73  EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDS 132

Query: 76  LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVVF 135
             +   LP +VDP+V  M  E   + +Y  +GGL  QI+E++E IELP+ +PELF  +  
Sbjct: 133 YVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI 192

Query: 136 ALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSA 195
           A                        KGVLLYGPPGTGKTLLARA+A + D  F++V  S 
Sbjct: 193 A----------------------QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 252

Query: 196 IIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELL 255
           ++ KYIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ + D E+QRT++ELL
Sbjct: 253 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELL 312

Query: 256 NQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGPDVLDPALLRPGRLD 315
           NQLDGF+   K+ +                         L+  N  D+LD ALLRPGR+D
Sbjct: 313 NQLDGFEASNKIKV-------------------------LMATNRIDILDQALLRPGRID 372

Query: 316 RKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 375
           RKIE P PNE+SR +ILKIH+  +     ID + + +   G +GA+L+ VCTEAGM A+R
Sbjct: 373 RKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 403

Query: 376 AERDYVIHEDFMKAVRKL 393
             R +V  EDF  AV K+
Sbjct: 433 ERRVHVTQEDFEMAVAKV 403

[Close]

BLAST of Lsi08G013660 vs. TAIR 10
Match: AT5G19990.1 (regulatory particle triple-A ATPase 6A )

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-76
Identity = 159/378 (42.06%), Postives = 221/378 (58.47%), Query Frame = 0


Query: 16  DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTT 75
           ++L+ LQ  G  +GEV++ +   +++VK     +YVV     +D  K+T  TRV L   +
Sbjct: 73  EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDS 132

Query: 76  LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVVF 135
             +   LP +VDP+V  M  E   + +Y  +GGL  QI+E++E IELP+ +PELF  +  
Sbjct: 133 YVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI 192

Query: 136 ALQITCTAPDSSSLFYSHYLFTFHLKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSA 195
           A                        KGVLLYGPPGTGKTLLARA+A + D  F++V  S 
Sbjct: 193 A----------------------QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 252

Query: 196 IIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELL 255
           ++ KYIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ + D E+QRT++ELL
Sbjct: 253 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELL 312

Query: 256 NQLDGFDQLGKVYLDIQISNIPTNPIQIPNKMMGVLNIHLIGPNGPDVLDPALLRPGRLD 315
           NQLDGF+   K+ +                         L+  N  D+LD ALLRPGR+D
Sbjct: 313 NQLDGFEASNKIKV-------------------------LMATNRIDILDQALLRPGRID 372

Query: 316 RKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 375
           RKIE P PNE+SR +ILKIH+  +     ID + + +   G +GA+L+ VCTEAGM A+R
Sbjct: 373 RKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 403

Query: 376 AERDYVIHEDFMKAVRKL 393
             R +V  EDF  AV K+
Sbjct: 433 ERRVHVTQEDFEMAVAKV 403

The following BLAST results are available for this feature:

BLAST of Lsi08G013660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEI3	9.5e-183	82.00	26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9MAK9	3.6e-182	81.75	26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702...	[more]
P62333	3.8e-147	67.33	26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1	[more]
P62335	3.8e-147	67.33	26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=...	[more]
P62334	3.8e-147	67.33	26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=...	[more]

BLAST of Lsi08G013660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VH84	1.9e-186	85.40	26S protease regulatory subunit S10B-like protein B-like OS=Cucumis melo var. ma...	[more]
A0A0A0LL40	1.9e-186	85.40	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362430 PE=3 SV...	[more]
A0A1S3BB45	1.9e-186	85.40	26S protease regulatory subunit S10B homolog B-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0D2UQM3	7.3e-186	85.16	AAA domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_009G198900...	[more]
A0A7J8SBS9	2.8e-185	84.78	AAA domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_008977 P...	[more]

BLAST of Lsi08G013660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886580.1	3.0e-186	85.64	26S proteasome regulatory subunit S10B homolog B-like [Benincasa hispida]	[more]
KAA0065205.1	3.9e-186	85.40	26S protease regulatory subunit S10B-like protein B-like [Cucumis melo var. maku...	[more]
XP_008444753.1	3.9e-186	85.40	PREDICTED: 26S protease regulatory subunit S10B homolog B-like [Cucumis melo]	[more]
XP_004152679.1	3.9e-186	85.40	26S proteasome regulatory subunit S10B homolog B [Cucumis sativus] >KGN62630.1 h...	[more]
KJB58200.1	1.5e-185	85.16	hypothetical protein B456_009G198900 [Gossypium raimondii]	[more]

BLAST of Lsi08G013660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43010.1	6.7e-184	82.00	regulatory particle triple-A ATPase 4A	[more]
AT1G45000.1	2.6e-183	81.75	AAA-type ATPase family protein	[more]
AT1G45000.2	2.0e-143	68.61	AAA-type ATPase family protein	[more]
AT5G20000.1	7.2e-77	42.33	AAA-type ATPase family protein	[more]
AT5G19990.1	1.2e-76	42.06	regulatory particle triple-A ATPase 6A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	GENE3D	1.10.8.60		coord: 322..392 e-value: 1.4E-21 score: 78.3
None	No IPR available	GENE3D	2.40.50.140		coord: 27..93 e-value: 1.4E-29 score: 103.7
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 161..268
None	No IPR available	PANTHER	PTHR23073:SF123	BNAC02G30020D PROTEIN	coord: 161..268
None	No IPR available	PANTHER	PTHR23073:SF123	BNAC02G30020D PROTEIN	coord: 295..407 coord: 1..134
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 295..407 coord: 1..134
None	No IPR available	CDD	cd00009	AAA	coord: 154..321 e-value: 4.6444E-18 score: 78.7271
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 159..323 e-value: 7.7E-16 score: 68.6
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 344..386 e-value: 2.4E-10 score: 40.1
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 163..321 e-value: 1.2E-34 score: 119.6
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 28..83 e-value: 1.7E-9 score: 37.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 94..321 e-value: 3.0E-51 score: 175.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 101..396

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G013660.1	Lsi08G013660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0045899	positive regulation of RNA polymerase II transcription preinitiation complex assembly
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
cellular_component	GO:0031597	cytosolic proteasome complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0036402	proteasome-activating activity