Lsi08G013610 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G013610
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Thioredoxin
Location	chr08: 21919285 .. 21920853 (+)
RNA-Seq Expression	Lsi08G013610
Synteny	Lsi08G013610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATATAAACCCTCCTCCCCTTCGTTTCTACTCATCGCTTCATTTTCAAGTACGGCGTAGACTTTTGCAGAAGAACACCGATTTTTGTTTGAACTAATGGCTGAAGAAGGGCAAGTGATTGGAGTTCACAAGGTTGAGGAATTCGAGGCGCAAGTCAAGCGAGGAAACGAAGCGGGGAAACTGGTATGATTATCGCTTTTCAGTATTCTCCATTTCTACTTTTCAATTGATTCGTTTTCGTATGTGATTTCCATGGAATTTTCGATTTGGTGCGTAGGTATATCGGAAAATCTCTCATGTCTTAACGATTGCCGTTGCATTATTATTGTTATTGTTGGAGATTGTTCTGTTCGATGATTTGGGAAAACTCGCGACCGATTCGTTAGGGTTTCTGATATTTACGTGTGGCTGTGTCTAGTTATTAGTTTAATTTCTTCAGTTTTGGCTACTTATATTCGATTGGAGTGTTGAAATTGCTAATAGGACGACTTAACGACTGTTTTGATTTTATCATGCTCTTCAATTTTTCTCTGCTGCTCGTTTCGTGTCTTTTTAGAACAAGTCTTTGAGATACTTCACTGTATTATATATAGTTTCAGCTTTTTAGTTCCTGATGTTTCTAAAATTTTGTTTGGTAGATTGTGGTGGATTTTACTGCTTCCTGGTGTCCACCCTGCCGTTTCATTGCTCCAGTATTCGTAGAGTTGGCTAAGGCGCACATCCATGTCATTTTCCTGAAAGTGGACGTCGATGAACTTAAAGTAAAGAAATTTAAGCCCTTTACAACTCTTCCCAAACTATCATATTATGCCCTCTTTGTTGCTTGGGGAAATTGTTGATACAGTGGAATGGAACTGTTTCGTTGAGTTGTTCCTTTTTTTAACAAACGATGGCGCTCCTGTTTCTTTACAGGAAATTGCCGAGAGGTTCGAAGTTAATGCAATGCCGACCTTTGTTTTCCTGAAAGGAGTGGTGGAAGTTCACAGGATTGTCGGCGCTGACAAAGTGGAGCTGGGGAAGAAAGTATTGGAATTAAGCGCTCCAGCGGCTGCAACTTCTGCTGCATAAATGGTCAGCTTGAAAGATCGTTCTCCCTCTTATTATTATGGTGTATTGATGATTCTGCTTTCGAGTTTGTTCTACTTGTGGATTTCATGACATTGTGTCTGAGATGTTTACTTGTTTAATGAATGTTTGTAGAATAATAAATGTATAATAAGATTTAAAATATATGATAAATTAGCTGCTTAAGCTTTTGAATTTAGTGGTGGCTTGAAAGTTTACAGATGCCTTTTTTTGTGACAGAAGAAAGAAAAAGAACATCTAAAAAAGCAGTGTCTACTTTTGCTTTACTTTCTTTCATTTTTCCCCAAGTTTGGAAAGTCTTCAATGGTGAGAAGGGTCTAAGGCTTGTATGGTTGGTCGAATTTCTTATATTGGTGCTTGGTTGTCTATGATGTGTTATGCTTAATCAGGTTAGATAAGATCTGAAACTTTGGAGGACTTGTCCCTTTCTGGTTAGAATTTAGGGCCCCACTTTGGTATGAGGAAATGGGATGAAAGGAGGAC

mRNA sequence

CTATATAAACCCTCCTCCCCTTCGTTTCTACTCATCGCTTCATTTTCAAGTACGGCGTAGACTTTTGCAGAAGAACACCGATTTTTGTTTGAACTAATGGCTGAAGAAGGGCAAGTGATTGGAGTTCACAAGGTTGAGGAATTCGAGGCGCAAGTCAAGCGAGGAAACGAAGCGGGGAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGTCCACCCTGCCGTTTCATTGCTCCAGTATTCGTAGAGTTGGCTAAGGCGCACATCCATGTCATTTTCCTGAAAGTGGACGTCGATGAACTTAAAGAAATTGCCGAGAGGTTCGAAGTTAATGCAATGCCGACCTTTGTTTTCCTGAAAGGAGTGGTGGAAGTTCACAGGATTGTCGGCGCTGACAAAGTGGAGCTGGGGAAGAAAGTATTGGAATTAAGCGCTCCAGCGGCTGCAACTTCTGCTGCATAAATGGTCAGCTTGAAAGATCGTTCTCCCTCTTATTATTATGGTGTATTGATGATTCTGCTTTCGAGTTTGTTCTACTTGTGGATTTCATGACATTGTGTCTGAGATGTTTACTTGTTTAATGAATGTTTGTAGAATAATAAATGTATAATAAGATTTAAAATATATGATAAATTAGCTGCTTAAGCTTTTGAATTTAGTGGTGGCTTGAAAGTTTACAGATGCCTTTTTTTGTGACAGAAGAAAGAAAAAGAACATCTAAAAAAGCAGTGTCTACTTTTGCTTTACTTTCTTTCATTTTTCCCCAAGTTTGGAAAGTCTTCAATGGTGAGAAGGGTCTAAGGCTTGTATGGTTGGTCGAATTTCTTATATTGGTGCTTGGTTGTCTATGATGTGTTATGCTTAATCAGGTTAGATAAGATCTGAAACTTTGGAGGACTTGTCCCTTTCTGGTTAGAATTTAGGGCCCCACTTTGGTATGAGGAAATGGGATGAAAGGAGGAC

Coding sequence (CDS)

ATGGCTGAAGAAGGGCAAGTGATTGGAGTTCACAAGGTTGAGGAATTCGAGGCGCAAGTCAAGCGAGGAAACGAAGCGGGGAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGTCCACCCTGCCGTTTCATTGCTCCAGTATTCGTAGAGTTGGCTAAGGCGCACATCCATGTCATTTTCCTGAAAGTGGACGTCGATGAACTTAAAGAAATTGCCGAGAGGTTCGAAGTTAATGCAATGCCGACCTTTGTTTTCCTGAAAGGAGTGGTGGAAGTTCACAGGATTGTCGGCGCTGACAAAGTGGAGCTGGGGAAGAAAGTATTGGAATTAAGCGCTCCAGCGGCTGCAACTTCTGCTGCATAA

Protein sequence

MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVIFLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSAA

Homology

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BLAST of Lsi08G013610 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-32
Identity = 69/118 (58.47%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 2   AEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVIF 61
           +EEGQV G HKVEE+    K+G E  KL+VVDFTASWC PCRFIAP+  ++AK   HVIF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 62  LKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATS 120
           LKVDVDELK ++  + V AMPTFVF+K   EV R+VGA K EL + +++ +APA  T+
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPATVTA 126

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BLAST of Lsi08G013610 vs. ExPASy Swiss-Prot
Match: P68177 (Thioredoxin H-type 1 OS=Brassica napus OX=3708 GN=THL-1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.0e-31
Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 5   GQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVIFLKV 64
           G+VI  H VE++  ++K   E+ KLIV+DFTA WCPPCRFIAP+FVELAK H+ V+F KV
Sbjct: 11  GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKV 70

Query: 65  DVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAA 118
           DVDEL  +A+ F+V AMPTFV++KG  ++ ++VGA K E+  K+L+ S  AAA
Sbjct: 71  DVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123

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BLAST of Lsi08G013610 vs. ExPASy Swiss-Prot
Match: P68176 (Thioredoxin H-type OS=Brassica oleracea OX=3712 GN=BOPC17 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.0e-31
Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 5   GQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVIFLKV 64
           G+VI  H VE++  ++K   E+ KLIV+DFTA WCPPCRFIAP+FVELAK H+ V+F KV
Sbjct: 11  GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKV 70

Query: 65  DVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAA 118
           DVDEL  +A+ F+V AMPTFV++KG  ++ ++VGA K E+  K+L+ S  AAA
Sbjct: 71  DVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123

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BLAST of Lsi08G013610 vs. ExPASy Swiss-Prot
Match: O64432 (Thioredoxin H-type OS=Brassica campestris OX=3711 GN=PEC-2 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-31
Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 5   GQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVIFLKV 64
           G+VI  H VE++  ++K   E+ KLIV+DFTA WCPPCRFIAP+FVELAK H+ V+F KV
Sbjct: 11  GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKV 70

Query: 65  DVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAA 118
           DVDEL  +A+ F+V AMPTFV++KG  ++ ++VGA K E+  K+L+ S  AAA
Sbjct: 71  DVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123

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BLAST of Lsi08G013610 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-30
Identity = 66/120 (55.00%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 2   AEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVIF 61
           AEEG VI  H  +EF+AQ+ +  EAGK++++DFTASWC PCRFIAPVF E AK     +F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLE-LSAPAAATSA 121
           LKVDVDELKE+AE++ V AMPTF+F+K   E  ++VGA K +L   +++ + A AA+ SA
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 122

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BLAST of Lsi08G013610 vs. ExPASy TrEMBL
Match: A0A6J1HFK3 (thioredoxin H5-like OS=Cucurbita moschata OX=3662 GN=LOC111463007 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 99/120 (82.50%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EGQVI V KVEEF+A VK+G EAGKLIVVDFTASWCPPCRFIAPVF E+AKAH++V+
Sbjct: 1   MAAEGQVIVVRKVEEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSA 120
           FLKVDVD+LKEIA++FEV AMPTFVFLKG  EVHRIVGADKVELGKKVLEL APAA +SA
Sbjct: 61  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 120

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BLAST of Lsi08G013610 vs. ExPASy TrEMBL
Match: A0A6J1KB35 (thioredoxin H5-like OS=Cucurbita maxima OX=3661 GN=LOC111492267 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.8e-45
Identity = 96/120 (80.00%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EGQ I V KV+EF+A VK+G+EAGKLIVVDFTASWCPPCRFIAPVF E+AKAH +V+
Sbjct: 26  MAAEGQAIVVRKVDEFDALVKQGSEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHSNVV 85

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSA 120
           FLKVDVD+LKEIA++FEV AMPTFVFLKG  EV+RIVGADKVELGKKVLEL APAA +SA
Sbjct: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVYRIVGADKVELGKKVLELGAPAATSSA 145

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BLAST of Lsi08G013610 vs. ExPASy TrEMBL
Match: A0A6J1CST8 (thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44
Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MAEEGQVIGVH VE F+  +K+G E+GKLIVVDFTASWCPPCRFIAP+F ELAKAHI VI
Sbjct: 1   MAEEGQVIGVHNVEAFDDLLKKGTESGKLIVVDFTASWCPPCRFIAPIFAELAKAHIGVI 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEV--HRIVGADKVELGKKVLELSAPAAAT 120
           FLKVDVDE+KE++E+FEV AMPTFVFLK   EV   RIVGADKVELGK+VL LSAPAAAT
Sbjct: 61  FLKVDVDEVKEVSEKFEVTAMPTFVFLKEGAEVKNSRIVGADKVELGKRVLALSAPAAAT 120

Query: 121 SAA 122
           SAA
Sbjct: 121 SAA 123

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BLAST of Lsi08G013610 vs. ExPASy TrEMBL
Match: A0A6J1GID1 (thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111454194 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.6e-40
Identity = 92/121 (76.03%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EGQVI +   +EF+  + +  E+GKLIV+DFTASWCPPCR IAPVF ELAKAH++V 
Sbjct: 1   MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVT 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSA 120
           FLKVDVD +KEIAERFEVNAMPTFVFLKG  EVHRIVGADKVELG KVLELSA A ATSA
Sbjct: 61  FLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVELGVKVLELSA-APATSA 120

Query: 121 A 122
           A
Sbjct: 121 A 120

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BLAST of Lsi08G013610 vs. ExPASy TrEMBL
Match: Q8H9E2 (Thioredoxin h OS=Cucurbita maxima OX=3661 GN=LOC111496364 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40
Identity = 91/121 (75.21%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EGQVI +   EEF+A + +  E+G+LIV+DFTASWCPPCRFIAPVF ELAKAH+HV 
Sbjct: 1   MAVEGQVIPLRDAEEFDAIIDKEKESGRLIVIDFTASWCPPCRFIAPVFAELAKAHVHVT 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSA 120
           FLKVDVD +KEIA+RFEV AMPTFVFLKG  EVHRIVGADKVELG KVLELSA A AT A
Sbjct: 61  FLKVDVDNVKEIAKRFEVTAMPTFVFLKGGNEVHRIVGADKVELGVKVLELSA-APATCA 120

Query: 121 A 122
           +
Sbjct: 121 S 120

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BLAST of Lsi08G013610 vs. NCBI nr
Match: XP_022962605.1 (thioredoxin H5-like [Cucurbita moschata] >KAG6598472.1 Thioredoxin H5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46
Identity = 99/120 (82.50%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EGQVI V KVEEF+A VK+G EAGKLIVVDFTASWCPPCRFIAPVF E+AKAH++V+
Sbjct: 1   MAAEGQVIVVRKVEEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSA 120
           FLKVDVD+LKEIA++FEV AMPTFVFLKG  EVHRIVGADKVELGKKVLEL APAA +SA
Sbjct: 61  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 120

[Close]

BLAST of Lsi08G013610 vs. NCBI nr
Match: XP_023545550.1 (thioredoxin H5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46
Identity = 99/120 (82.50%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EGQVI V KVEEF+A VK+G EAGKLIVVDFTASWCPPCRFIAPVF E+AKAH++V+
Sbjct: 1   MAAEGQVIVVRKVEEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSA 120
           FLKVDVDELKEIA++F+V AMPTFVFLKG  EVHRIVGADKVELGKKVLEL APAA +SA
Sbjct: 61  FLKVDVDELKEIAQKFDVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 120

[Close]

BLAST of Lsi08G013610 vs. NCBI nr
Match: KAG7029409.1 (Thioredoxin H5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.5 bits (493), Expect = 5.3e-46
Identity = 98/120 (81.67%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EGQVI V KV+EF+A VK+G EAGKLIVVDFTASWCPPCRFIAPVF E+AKAH++V+
Sbjct: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSA 120
           FLKVDVD+LKEIA++FEV AMPTFVFLKG  EVHRIVGADKVELGKKVLEL APAA +SA
Sbjct: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 145

[Close]

BLAST of Lsi08G013610 vs. NCBI nr
Match: XP_022997319.1 (thioredoxin H5-like [Cucurbita maxima])

HSP 1 Score: 190.3 bits (482), Expect = 9.9e-45
Identity = 96/120 (80.00%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EGQ I V KV+EF+A VK+G+EAGKLIVVDFTASWCPPCRFIAPVF E+AKAH +V+
Sbjct: 26  MAAEGQAIVVRKVDEFDALVKQGSEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHSNVV 85

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSAPAAATSA 120
           FLKVDVD+LKEIA++FEV AMPTFVFLKG  EV+RIVGADKVELGKKVLEL APAA +SA
Sbjct: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVYRIVGADKVELGKKVLELGAPAATSSA 145

[Close]

BLAST of Lsi08G013610 vs. NCBI nr
Match: XP_038884374.1 (thioredoxin H-type-like [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 2.2e-44
Identity = 97/123 (78.86%), Postives = 110/123 (89.43%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MAEEGQVIG+HKVEEF+  VK GNEAGKLIVVDFTASWCPPCRFIAP+F ELAKA+++VI
Sbjct: 1   MAEEGQVIGIHKVEEFDTLVKLGNEAGKLIVVDFTASWCPPCRFIAPIFAELAKANVNVI 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLEL--SAPAAAT 120
           FLKVDVDE+KEIAE++ VNAMPTFVFLK   E+HRIVGADKV+LG KV EL  SA A+AT
Sbjct: 61  FLKVDVDEVKEIAEKYGVNAMPTFVFLKDENEIHRIVGADKVQLGNKVAELARSAAASAT 120

Query: 121 SAA 122
           S+A
Sbjct: 121 SSA 123

[Close]

BLAST of Lsi08G013610 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 131.3 bits (329), Expect = 5.1e-31
Identity = 62/110 (56.36%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EG+VI  H +E +  +VK  NE+ KLIV+DFTASWCPPCRFIAPVF E+AK   +V+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLE 111
           F K+DVDEL+ +A+ F+V AMPTFVF+K    + R+VGA K E+ +K+++
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMK 110

[Close]

BLAST of Lsi08G013610 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 61/104 (58.65%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MAEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVI 60
           MA EG+VI  H VE++  ++K  NE+ KLIV+DFTA+WCPPCRFIAPVF +LAK H+ V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVEL 105
           F KVDVDEL  +AE F+V AMPTF+F+K       +VGA K E+
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEI 104

[Close]

BLAST of Lsi08G013610 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 9.0e-28
Identity = 60/110 (54.55%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 2   AEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHI-HVI 61
           AEEGQVIG H  + +  Q+ +  E+ KLIV+DFTASWCPPCR IAP+F +LAK  +   I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLE 111
           F KVDVDEL+ +A+ F V AMPTFVF+K    V ++VGA+K +L  K+++
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVK 112

[Close]

BLAST of Lsi08G013610 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 117.5 bits (293), Expect = 7.6e-27
Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 2   AEEGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVIF 61
           +EEGQVI  H VE +  Q+++ NE+  L+VVDFTASWC PCRFIAP F +LAK   +V+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVEL 105
           LKVD DELK +A  + + AMPTF+FLK    + ++VGA K EL
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDEL 105

[Close]

BLAST of Lsi08G013610 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23
Identity = 44/110 (40.00%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 4   EGQVIGVHKVEEFEAQVKRGNEAGKLIVVDFTASWCPPCRFIAPVFVELAKAHIHVIFLK 63
           +G+VI +H   E EA+ K   +A +L+++ FTA+WC PCR+++P++  LA  H  V+FLK
Sbjct: 269 DGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328

Query: 64  VDVDELKEIAERFEVNAMPTFVFLKGVVEVHRIVGADKVELGKKVLELSA 114
           VD+D+  ++A  + ++++PTF F++   EV ++VGADK  L +K+ + S+
Sbjct: 329 VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQHSS 378

The following BLAST results are available for this feature:

BLAST of Lsi08G013610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29449	4.5e-32	58.47	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P68177	5.0e-31	56.64	Thioredoxin H-type 1 OS=Brassica napus OX=3708 GN=THL-1 PE=2 SV=1	[more]
P68176	5.0e-31	56.64	Thioredoxin H-type OS=Brassica oleracea OX=3712 GN=BOPC17 PE=2 SV=1	[more]
O64432	6.5e-31	56.64	Thioredoxin H-type OS=Brassica campestris OX=3711 GN=PEC-2 PE=2 SV=1	[more]
Q0D840	2.5e-30	55.00	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]

BLAST of Lsi08G013610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFK3	1.1e-46	82.50	thioredoxin H5-like OS=Cucurbita moschata OX=3662 GN=LOC111463007 PE=4 SV=1	[more]
A0A6J1KB35	4.8e-45	80.00	thioredoxin H5-like OS=Cucurbita maxima OX=3661 GN=LOC111492267 PE=4 SV=1	[more]
A0A6J1CST8	3.1e-44	79.67	thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV...	[more]
A0A6J1GID1	3.6e-40	76.03	thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111454194 PE=4 SV=1	[more]
Q8H9E2	4.6e-40	75.21	Thioredoxin h OS=Cucurbita maxima OX=3661 GN=LOC111496364 PE=2 SV=1	[more]

BLAST of Lsi08G013610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962605.1	2.4e-46	82.50	thioredoxin H5-like [Cucurbita moschata] >KAG6598472.1 Thioredoxin H5, partial [...	[more]
XP_023545550.1	2.4e-46	82.50	thioredoxin H5-like [Cucurbita pepo subsp. pepo]	[more]
KAG7029409.1	5.3e-46	81.67	Thioredoxin H5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997319.1	9.9e-45	80.00	thioredoxin H5-like [Cucurbita maxima]	[more]
XP_038884374.1	2.2e-44	78.86	thioredoxin H-type-like [Benincasa hispida]	[more]

BLAST of Lsi08G013610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45145.1	5.1e-31	56.36	thioredoxin H-type 5	[more]
AT5G42980.1	1.5e-30	58.65	thioredoxin 3	[more]
AT1G19730.1	9.0e-28	54.55	Thioredoxin superfamily protein	[more]
AT3G51030.1	7.6e-27	56.31	thioredoxin H-type 1	[more]
AT3G17880.1	2.3e-23	40.00	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 77..88 score: 36.62 coord: 38..47 score: 58.56 coord: 30..38 score: 53.21
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..117 e-value: 1.4E-36 score: 127.1
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..115
None	No IPR available	PANTHER	PTHR10438:SF399	THIOREDOXIN	coord: 1..115
None	No IPR available	CDD	cd02947	TRX_family	coord: 14..103 e-value: 5.04993E-32 score: 106.488
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 10..103 e-value: 3.6E-24 score: 84.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..121 score: 12.74671
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 5..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G013610.1	Lsi08G013610.1	mRNA