Lsi08G013480 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G013480
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	B-box zinc finger protein 20-like
Location	chr08: 21779307 .. 21780414 (+)
RNA-Seq Expression	Lsi08G013480
Synteny	Lsi08G013480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATTCAGTGTGATGTTTGTGAAAAAGGAGATGCGGCGGTGTTCTGCACGGCGGATGAGGCAGCGCTCTGTAATCTCTGTGATCACCGTGTCCACCGTGCCAATAAACTTGCTTCGAAGCACCGACGGTTTTCTCTGCTCCGACCTGACGCGGGGGAGGCTCCCGTCTGTGATGTGTGCAGGGTATTTTGCCGAGATCTGATTCTTGTTGATTTTTTGGGGATTTGGGTTTTGCTCTGTTTTTATATCTTTGACGTGGGTTTTTGAATCTGATTTTGTAGGAGCGACGAGGGTTCTTGTTCTGTCAGCAGGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATCCATTCGGCTAATGAACTCACTATGAAGCACGATAGGTTTCTTCTGACTGGGATTAAGCTTACCGCCACCGCTGCTCTGTACGCGCCACCTCCATCCGGCGAGAAACCGGTTGGGAGTGGTGGTCGTGTGGTTTCTGAATCTAAGTCAAAGGGCTCTGTCAAGAAATCGGCTGCTGTTTCTAATGCTCCAACGATATGCCCACCAAGTGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCGGCGGTAGTGAACAAGGGCGGTGGAGGTCAGATTGCGACCGGCGGCGGTGGATCGGCGAGTAGTATATCGGAATATTTGATGGAGACGCTTCCTGGGTGGCACTTTGAAGATTTTCTTGATTCCTCTGTCCCTCCCCCTTTTGTGGAGGTTTGTTTGTCTCTCACTGTTATTATTACTGTTTCTATGTGAAGTTCATCAGAAAGTTGAGGAATGTTTTTATGTTTGTCCTTTTTTTGCAGTTTGATGAAGGGGTGAGATTTCCATTTGTGGAAGGTGATTTTAATGGTTGTTTTTCATCATCGGAAAGTTTGGAGCTTTGGGTCCCTCAGGGGCCACCACCGGCTGTGTATAATTCAGGATTAATGATGAATAATGGGTCGAAGGACACAAAGGAATTGGGAGTAAATTCATCAAAAGTCAATAGAGTGTGGACAGATGATGGTTTCACTGTGCCACAGATTACAAGTACAGCCCCATCTGCAGGCTTTAAGAGATCCAGAACTTTTTGGTAA

mRNA sequence

ATGAAGATTCAGTGTGATGTTTGTGAAAAAGGAGATGCGGCGGTGTTCTGCACGGCGGATGAGGCAGCGCTCTGTAATCTCTGTGATCACCGTGTCCACCGTGCCAATAAACTTGCTTCGAAGCACCGACGGTTTTCTCTGCTCCGACCTGACGCGGGGGAGGCTCCCGTCTGTGATGTGTGCAGGGAGCGACGAGGGTTCTTGTTCTGTCAGCAGGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATCCATTCGGCTAATGAACTCACTATGAAGCACGATAGGTTTCTTCTGACTGGGATTAAGCTTACCGCCACCGCTGCTCTGTACGCGCCACCTCCATCCGGCGAGAAACCGGTTGGGAGTGGTGGTCGTGTGGTTTCTGAATCTAAGTCAAAGGGCTCTGTCAAGAAATCGGCTGCTGTTTCTAATGCTCCAACGATATGCCCACCAAGTGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCGGCGGTAGTGAACAAGGGCGGTGGAGGTCAGATTGCGACCGGCGGCGGTGGATCGGCGAGTAGTATATCGGAATATTTGATGGAGACGCTTCCTGGGTGGCACTTTGAAGATTTTCTTGATTCCTCTGTCCCTCCCCCTTTTGTGGAGTTTGATGAAGGGGTGAGATTTCCATTTGTGGAAGGTGATTTTAATGGTTGTTTTTCATCATCGGAAAGTTTGGAGCTTTGGGTCCCTCAGGGGCCACCACCGGCTGTGTATAATTCAGGATTAATGATGAATAATGGGTCGAAGGACACAAAGGAATTGGGAGTAAATTCATCAAAAGTCAATAGAGTGTGGACAGATGATGGTTTCACTGTGCCACAGATTACAAGTACAGCCCCATCTGCAGGCTTTAAGAGATCCAGAACTTTTTGGTAA

Coding sequence (CDS)

ATGAAGATTCAGTGTGATGTTTGTGAAAAAGGAGATGCGGCGGTGTTCTGCACGGCGGATGAGGCAGCGCTCTGTAATCTCTGTGATCACCGTGTCCACCGTGCCAATAAACTTGCTTCGAAGCACCGACGGTTTTCTCTGCTCCGACCTGACGCGGGGGAGGCTCCCGTCTGTGATGTGTGCAGGGAGCGACGAGGGTTCTTGTTCTGTCAGCAGGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATCCATTCGGCTAATGAACTCACTATGAAGCACGATAGGTTTCTTCTGACTGGGATTAAGCTTACCGCCACCGCTGCTCTGTACGCGCCACCTCCATCCGGCGAGAAACCGGTTGGGAGTGGTGGTCGTGTGGTTTCTGAATCTAAGTCAAAGGGCTCTGTCAAGAAATCGGCTGCTGTTTCTAATGCTCCAACGATATGCCCACCAAGTGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCGGCGGTAGTGAACAAGGGCGGTGGAGGTCAGATTGCGACCGGCGGCGGTGGATCGGCGAGTAGTATATCGGAATATTTGATGGAGACGCTTCCTGGGTGGCACTTTGAAGATTTTCTTGATTCCTCTGTCCCTCCCCCTTTTGTGGAGTTTGATGAAGGGGTGAGATTTCCATTTGTGGAAGGTGATTTTAATGGTTGTTTTTCATCATCGGAAAGTTTGGAGCTTTGGGTCCCTCAGGGGCCACCACCGGCTGTGTATAATTCAGGATTAATGATGAATAATGGGTCGAAGGACACAAAGGAATTGGGAGTAAATTCATCAAAAGTCAATAGAGTGTGGACAGATGATGGTTTCACTGTGCCACAGATTACAAGTACAGCCCCATCTGCAGGCTTTAAGAGATCCAGAACTTTTTGGTAA

Protein sequence

MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDVCRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEKPVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATGGGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLELWVPQGPPPAVYNSGLMMNNGSKDTKELGVNSSKVNRVWTDDGFTVPQITSTAPSAGFKRSRTFW

Homology

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BLAST of Lsi08G013480 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.0e-61
Identity = 146/345 (42.32%), Postives = 199/345 (57.68%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAG--EAPVC 60
           MKI+CDVC+K +A+VFCTADEA+LC  CDH+VH ANKLASKH RFSLL P +    +P+C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DVCRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSG 120
           D+C++++  LFCQQDRAILC++CD  IH+ANE T KHDRFLLTG+KL+AT+++Y P    
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 EKPVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIA 180
                      S S ++      +++SN P +  P   ++AP         +K  GG  +
Sbjct: 121 SS---------SSSSNQDFSVPGSSISNPPPLKKP---LSAPPQSNKIQPFSKINGGDAS 180

Query: 181 TGGGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVE---FDEGVRFPFVE--------- 240
               GS S+ISEYLM+TLPGWH EDFLDSS+P         D+GV  P++E         
Sbjct: 181 VNQWGSTSTISEYLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDGV-LPYMEPEDDNNTKR 240

Query: 241 -------GDFNGCFSSSESLELWVPQGP---PPAVYNSGLMMNNG------SKDTKELGV 300
                   + N     S++L +WVPQ P   P +  N     +N       +K+T    V
Sbjct: 241 NNNNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEVV 300

Query: 301 NSSKV---------NRVWTDD-GFTVPQITSTAPSAGFKRSRTFW 306
           + + +         N+ W DD GFTVPQIT   P +  K+ R+FW
Sbjct: 301 SFAPIQNMKQQGQNNKRWYDDGGFTVPQIT-PPPLSSNKKFRSFW 331

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BLAST of Lsi08G013480 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-47
Identity = 108/220 (49.09%), Postives = 131/220 (59.55%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKI C VC+K +A+VFC ADEAALCN CD  VH ANKLA KH RFSL  P   +AP+CD+
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           C ERR  LFCQ+DRAILCRECD PIH ANE T KH+RFLLTG+K++A+ + Y P  S   
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAY-PRASNSN 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
              + GR  +  KS  S   S+A +   T    +   N    I          G      
Sbjct: 121 SAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSG-----S 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGV 221
           G G   SISEYLMETLPGW  ED L+    P  V +++ +
Sbjct: 181 GSGCTGSISEYLMETLPGWRVEDLLEH---PSCVSYEDNI 211

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BLAST of Lsi08G013480 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.6e-30
Identity = 69/150 (46.00%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEK  A V C ADEAALC  CD  +H ANKLASKH+R   L   + + P CD+
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYA------- 120
           C+E+  F+FC +DRA+LCR+CD+ IH AN  +  H RFL TGIK+  T+ + +       
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 PPPSGEKPVGSGGRVVSESKSKGSVKKSAA 144
           P PS  +      ++ ++S S+   + S+A
Sbjct: 121 PEPSNNQQ--KANQIPAKSTSQQQQQPSSA 147

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BLAST of Lsi08G013480 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-30
Identity = 61/105 (58.10%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQC+VCE  +A V C ADEAALC  CD ++H ANKLA KH+R   L   A   P CD+
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKL 106
           C+E  GF FC QDRA+LCR+CD  IH+ N     H RFLLTGIK+
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104

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BLAST of Lsi08G013480 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28
Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEK  A + C ADEAALC  CD  VH ANKLASKH+R   L   + + P CD+
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRL-FLDSLSTKFPPCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATA 110
           C E+  F+FC +DRA+LCR+CD+  H+ N  +  H RFL TGI++  ++
Sbjct: 61  CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSS 108

[Close]

BLAST of Lsi08G013480 vs. ExPASy TrEMBL
Match: A0A5A7VI96 (B-box zinc finger protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005260 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.3e-160
Identity = 278/305 (91.15%), Postives = 288/305 (94.43%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDAAVFCTADEAALC+LCDHRVH ANKLASKHRRFSLLRPDAGEAPVCDV
Sbjct: 1   MKIQCDVCEKGDAAVFCTADEAALCDLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           C+ERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTGIKL+A+AALYAPPPSGEK
Sbjct: 61  CKERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPPPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
            + SGGRVVS SKSKGSVKK AAVS  PTIC P+VCVNAPTNITPAAVVNKGGGGQIATG
Sbjct: 121 QIESGGRVVSASKSKGSVKKVAAVSKVPTICTPNVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLE 240
           GGGSASSISEYLMETLPGWHFEDFLDSSV PPFVEFD+G+ FPFVEGD NGCFSSSE LE
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVSPPFVEFDDGIGFPFVEGDLNGCFSSSERLE 240

Query: 241 LWVPQGPPPAVYNSGLMMNNGSKDTKELGVNSSKVNRVWTDDGFTVPQITSTAPSAGFKR 300
           LWVPQGPP A+YNSGLMMNNG KDTKELGVNSSKVNR WTDDGFTVPQITSTAPS+GFKR
Sbjct: 241 LWVPQGPPAALYNSGLMMNNGLKDTKELGVNSSKVNREWTDDGFTVPQITSTAPSSGFKR 300

Query: 301 SRTFW 306
           SR FW
Sbjct: 301 SRPFW 305

[Close]

BLAST of Lsi08G013480 vs. ExPASy TrEMBL
Match: A0A1S3BBW0 (B-box zinc finger protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488017 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.3e-160
Identity = 278/305 (91.15%), Postives = 288/305 (94.43%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDAAVFCTADEAALC+LCDHRVH ANKLASKHRRFSLLRPDAGEAPVCDV
Sbjct: 1   MKIQCDVCEKGDAAVFCTADEAALCDLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           C+ERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTGIKL+A+AALYAPPPSGEK
Sbjct: 61  CKERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPPPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
            + SGGRVVS SKSKGSVKK AAVS  PTIC P+VCVNAPTNITPAAVVNKGGGGQIATG
Sbjct: 121 QIESGGRVVSASKSKGSVKKVAAVSKVPTICTPNVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLE 240
           GGGSASSISEYLMETLPGWHFEDFLDSSV PPFVEFD+G+ FPFVEGD NGCFSSSE LE
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVSPPFVEFDDGIGFPFVEGDLNGCFSSSERLE 240

Query: 241 LWVPQGPPPAVYNSGLMMNNGSKDTKELGVNSSKVNRVWTDDGFTVPQITSTAPSAGFKR 300
           LWVPQGPP A+YNSGLMMNNG KDTKELGVNSSKVNR WTDDGFTVPQITSTAPS+GFKR
Sbjct: 241 LWVPQGPPAALYNSGLMMNNGLKDTKELGVNSSKVNREWTDDGFTVPQITSTAPSSGFKR 300

Query: 301 SRTFW 306
           SR FW
Sbjct: 301 SRPFW 305

[Close]

BLAST of Lsi08G013480 vs. ExPASy TrEMBL
Match: A0A0A0LL53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365080 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.5e-159
Identity = 278/306 (90.85%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDA VFCTADEAALCNLCDHRVH ANKLASKHRRFSLLRPDAGEAPVCDV
Sbjct: 1   MKIQCDVCEKGDAVVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           C+ERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTGIKL+A+AALYAP PSGEK
Sbjct: 61  CKERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPSPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
           P+GSGG VVS SKSKGSVKK AAVS APTIC P+VCVNAPTNITPAAVVNKGGGGQIATG
Sbjct: 121 PIGSGGCVVSASKSKGSVKKVAAVSKAPTICTPNVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLE 240
           GGGSASSISEYLMETLPGWHFEDFLDSSV PPFVEFD+G+ FPFVEGD NGCFSSSE +E
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVSPPFVEFDDGIGFPFVEGDLNGCFSSSERIE 240

Query: 241 LWVPQGPPPAVYNSGLMMNNGSKDTKELGVNSSKVNR-VWTDDGFTVPQITSTAPSAGFK 300
           LWVPQGPPPA YNSGLMMNNG KDTK+LGVNSSKVNR VWTDDGFTVPQITST PS GFK
Sbjct: 241 LWVPQGPPPAPYNSGLMMNNGLKDTKDLGVNSSKVNRSVWTDDGFTVPQITSTVPSPGFK 300

Query: 301 RSRTFW 306
           RSR FW
Sbjct: 301 RSRPFW 306

[Close]

BLAST of Lsi08G013480 vs. ExPASy TrEMBL
Match: A0A6J1CQY0 (B-box zinc finger protein 21-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013937 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.6e-143
Identity = 262/315 (83.17%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDA+VFCTADEA LCNLCDHRVH ANKLASKHRRFSLLRP A EAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTG+KL+ TAALY PPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
           P+GSGGR VS+ KSK SVK   AVS AP  CPPSV VNAP NI PAA VNKGGGG I TG
Sbjct: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFD-EGVRFPFVEGDFNGCFSSSESL 240
           GGG ASSISEYLMETLPGWHFEDFLDSSVPPPFVE    GV  PFVEG+ +GCFSSSESL
Sbjct: 181 GGGLASSISEYLMETLPGWHFEDFLDSSVPPPFVELQCGGVGLPFVEGEIDGCFSSSESL 240

Query: 241 ELWVPQGPPPAVYNSGLM------MNNGSKDTKELGVNSSK-VNR-VWTDDGFTVPQITS 300
           ELWVPQGPPPA+Y SGLM       NNG K+TKELG+NSSK VNR VWTDDGFTVPQITS
Sbjct: 241 ELWVPQGPPPALYGSGLMTMNNSNTNNGLKETKELGINSSKVVNRSVWTDDGFTVPQITS 300

Query: 301 TA-PSAGFKRSRTFW 306
           TA PSAGFKRSR FW
Sbjct: 301 TATPSAGFKRSRPFW 315

[Close]

BLAST of Lsi08G013480 vs. ExPASy TrEMBL
Match: A0A6J1CSK3 (B-box zinc finger protein 21-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013937 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.3e-142
Identity = 262/314 (83.44%), Postives = 272/314 (86.62%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDA+VFCTADEA LCNLCDHRVH ANKLASKHRRFSLLRP A EAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTG+KL+ TAALY PPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
           P+GSGGR VS+ KSK SVK   AVS AP  CPPSV VNAP NI PAA VNKGGGG I TG
Sbjct: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLE 240
           GGG ASSISEYLMETLPGWHFEDFLDSSVPPPFVE   GV  PFVEG+ +GCFSSSESLE
Sbjct: 181 GGGLASSISEYLMETLPGWHFEDFLDSSVPPPFVECG-GVGLPFVEGEIDGCFSSSESLE 240

Query: 241 LWVPQGPPPAVYNSGLM------MNNGSKDTKELGVNSSK-VNR-VWTDDGFTVPQITST 300
           LWVPQGPPPA+Y SGLM       NNG K+TKELG+NSSK VNR VWTDDGFTVPQITST
Sbjct: 241 LWVPQGPPPALYGSGLMTMNNSNTNNGLKETKELGINSSKVVNRSVWTDDGFTVPQITST 300

Query: 301 A-PSAGFKRSRTFW 306
           A PSAGFKRSR FW
Sbjct: 301 ATPSAGFKRSRPFW 313

[Close]

BLAST of Lsi08G013480 vs. NCBI nr
Match: XP_038885493.1 (B-box zinc finger protein 20-like [Benincasa hispida])

HSP 1 Score: 590.5 bits (1521), Expect = 8.3e-165
Identity = 288/306 (94.12%), Postives = 293/306 (95.75%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVH ANKLASKHRRFSLLRPDAGEAPVCDV
Sbjct: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANE TMKHDRFLLTGIKL+A+AALY PPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANEHTMKHDRFLLTGIKLSASAALYVPPPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
           PVGSGGRVVSE KSKGSVKK+AAVS AP ICPPSVCVNAPTNITPAAVVNKGGGGQIATG
Sbjct: 121 PVGSGGRVVSEPKSKGSVKKAAAVSKAPKICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLE 240
           G GSASSISEYLMETLPGWHFEDFLDSSV PPFVEFDEG+ FPFVEGDFNGCFSSSE LE
Sbjct: 181 GNGSASSISEYLMETLPGWHFEDFLDSSVSPPFVEFDEGMEFPFVEGDFNGCFSSSERLE 240

Query: 241 LWVPQGPPPAVYNSGLMMNNGSKDTKELGVNSSKVNRVWTDDGFTVPQITS-TAPSAGFK 300
           LWVPQGPPPA+YNSGLMMNNG KDTKELGVNSSKVNRVWTDDGFTVPQITS TAPSAGFK
Sbjct: 241 LWVPQGPPPALYNSGLMMNNGLKDTKELGVNSSKVNRVWTDDGFTVPQITSTTAPSAGFK 300

Query: 301 RSRTFW 306
           RSR FW
Sbjct: 301 RSRPFW 306

[Close]

BLAST of Lsi08G013480 vs. NCBI nr
Match: XP_008444771.1 (PREDICTED: B-box zinc finger protein 20-like [Cucumis melo] >KAA0065189.1 B-box zinc finger protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 574.7 bits (1480), Expect = 4.7e-160
Identity = 278/305 (91.15%), Postives = 288/305 (94.43%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDAAVFCTADEAALC+LCDHRVH ANKLASKHRRFSLLRPDAGEAPVCDV
Sbjct: 1   MKIQCDVCEKGDAAVFCTADEAALCDLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           C+ERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTGIKL+A+AALYAPPPSGEK
Sbjct: 61  CKERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPPPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
            + SGGRVVS SKSKGSVKK AAVS  PTIC P+VCVNAPTNITPAAVVNKGGGGQIATG
Sbjct: 121 QIESGGRVVSASKSKGSVKKVAAVSKVPTICTPNVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLE 240
           GGGSASSISEYLMETLPGWHFEDFLDSSV PPFVEFD+G+ FPFVEGD NGCFSSSE LE
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVSPPFVEFDDGIGFPFVEGDLNGCFSSSERLE 240

Query: 241 LWVPQGPPPAVYNSGLMMNNGSKDTKELGVNSSKVNRVWTDDGFTVPQITSTAPSAGFKR 300
           LWVPQGPP A+YNSGLMMNNG KDTKELGVNSSKVNR WTDDGFTVPQITSTAPS+GFKR
Sbjct: 241 LWVPQGPPAALYNSGLMMNNGLKDTKELGVNSSKVNREWTDDGFTVPQITSTAPSSGFKR 300

Query: 301 SRTFW 306
           SR FW
Sbjct: 301 SRPFW 305

[Close]

BLAST of Lsi08G013480 vs. NCBI nr
Match: XP_004152665.1 (B-box zinc finger protein 20 [Cucumis sativus] >KGN62650.1 hypothetical protein Csa_022601 [Cucumis sativus])

HSP 1 Score: 572.0 bits (1473), Expect = 3.1e-159
Identity = 278/306 (90.85%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDA VFCTADEAALCNLCDHRVH ANKLASKHRRFSLLRPDAGEAPVCDV
Sbjct: 1   MKIQCDVCEKGDAVVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           C+ERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTGIKL+A+AALYAP PSGEK
Sbjct: 61  CKERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPSPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
           P+GSGG VVS SKSKGSVKK AAVS APTIC P+VCVNAPTNITPAAVVNKGGGGQIATG
Sbjct: 121 PIGSGGCVVSASKSKGSVKKVAAVSKAPTICTPNVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLE 240
           GGGSASSISEYLMETLPGWHFEDFLDSSV PPFVEFD+G+ FPFVEGD NGCFSSSE +E
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVSPPFVEFDDGIGFPFVEGDLNGCFSSSERIE 240

Query: 241 LWVPQGPPPAVYNSGLMMNNGSKDTKELGVNSSKVNR-VWTDDGFTVPQITSTAPSAGFK 300
           LWVPQGPPPA YNSGLMMNNG KDTK+LGVNSSKVNR VWTDDGFTVPQITST PS GFK
Sbjct: 241 LWVPQGPPPAPYNSGLMMNNGLKDTKDLGVNSSKVNRSVWTDDGFTVPQITSTVPSPGFK 300

Query: 301 RSRTFW 306
           RSR FW
Sbjct: 301 RSRPFW 306

[Close]

BLAST of Lsi08G013480 vs. NCBI nr
Match: XP_022144185.1 (B-box zinc finger protein 21-like isoform X1 [Momordica charantia])

HSP 1 Score: 516.2 bits (1328), Expect = 2.0e-142
Identity = 262/315 (83.17%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDA+VFCTADEA LCNLCDHRVH ANKLASKHRRFSLLRP A EAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTG+KL+ TAALY PPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
           P+GSGGR VS+ KSK SVK   AVS AP  CPPSV VNAP NI PAA VNKGGGG I TG
Sbjct: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFD-EGVRFPFVEGDFNGCFSSSESL 240
           GGG ASSISEYLMETLPGWHFEDFLDSSVPPPFVE    GV  PFVEG+ +GCFSSSESL
Sbjct: 181 GGGLASSISEYLMETLPGWHFEDFLDSSVPPPFVELQCGGVGLPFVEGEIDGCFSSSESL 240

Query: 241 ELWVPQGPPPAVYNSGLM------MNNGSKDTKELGVNSSK-VNR-VWTDDGFTVPQITS 300
           ELWVPQGPPPA+Y SGLM       NNG K+TKELG+NSSK VNR VWTDDGFTVPQITS
Sbjct: 241 ELWVPQGPPPALYGSGLMTMNNSNTNNGLKETKELGINSSKVVNRSVWTDDGFTVPQITS 300

Query: 301 TA-PSAGFKRSRTFW 306
           TA PSAGFKRSR FW
Sbjct: 301 TATPSAGFKRSRPFW 315

[Close]

BLAST of Lsi08G013480 vs. NCBI nr
Match: XP_022144186.1 (B-box zinc finger protein 21-like isoform X2 [Momordica charantia])

HSP 1 Score: 515.8 bits (1327), Expect = 2.6e-142
Identity = 262/314 (83.44%), Postives = 272/314 (86.62%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEKGDA+VFCTADEA LCNLCDHRVH ANKLASKHRRFSLLRP A EAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTG+KL+ TAALY PPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
           P+GSGGR VS+ KSK SVK   AVS AP  CPPSV VNAP NI PAA VNKGGGG I TG
Sbjct: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGVRFPFVEGDFNGCFSSSESLE 240
           GGG ASSISEYLMETLPGWHFEDFLDSSVPPPFVE   GV  PFVEG+ +GCFSSSESLE
Sbjct: 181 GGGLASSISEYLMETLPGWHFEDFLDSSVPPPFVECG-GVGLPFVEGEIDGCFSSSESLE 240

Query: 241 LWVPQGPPPAVYNSGLM------MNNGSKDTKELGVNSSK-VNR-VWTDDGFTVPQITST 300
           LWVPQGPPPA+Y SGLM       NNG K+TKELG+NSSK VNR VWTDDGFTVPQITST
Sbjct: 241 LWVPQGPPPALYGSGLMTMNNSNTNNGLKETKELGINSSKVVNRSVWTDDGFTVPQITST 300

Query: 301 A-PSAGFKRSRTFW 306
           A PSAGFKRSR FW
Sbjct: 301 ATPSAGFKRSRPFW 313

[Close]

BLAST of Lsi08G013480 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 238.4 bits (607), Expect = 7.5e-63
Identity = 146/345 (42.32%), Postives = 199/345 (57.68%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAG--EAPVC 60
           MKI+CDVC+K +A+VFCTADEA+LC  CDH+VH ANKLASKH RFSLL P +    +P+C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DVCRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSG 120
           D+C++++  LFCQQDRAILC++CD  IH+ANE T KHDRFLLTG+KL+AT+++Y P    
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 EKPVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIA 180
                      S S ++      +++SN P +  P   ++AP         +K  GG  +
Sbjct: 121 SS---------SSSSNQDFSVPGSSISNPPPLKKP---LSAPPQSNKIQPFSKINGGDAS 180

Query: 181 TGGGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVE---FDEGVRFPFVE--------- 240
               GS S+ISEYLM+TLPGWH EDFLDSS+P         D+GV  P++E         
Sbjct: 181 VNQWGSTSTISEYLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDGV-LPYMEPEDDNNTKR 240

Query: 241 -------GDFNGCFSSSESLELWVPQGP---PPAVYNSGLMMNNG------SKDTKELGV 300
                   + N     S++L +WVPQ P   P +  N     +N       +K+T    V
Sbjct: 241 NNNNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEVV 300

Query: 301 NSSKV---------NRVWTDD-GFTVPQITSTAPSAGFKRSRTFW 306
           + + +         N+ W DD GFTVPQIT   P +  K+ R+FW
Sbjct: 301 SFAPIQNMKQQGQNNKRWYDDGGFTVPQIT-PPPLSSNKKFRSFW 331

[Close]

BLAST of Lsi08G013480 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48
Identity = 108/220 (49.09%), Postives = 131/220 (59.55%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKI C VC+K +A+VFC ADEAALCN CD  VH ANKLA KH RFSL  P   +AP+CD+
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYAPPPSGEK 120
           C ERR  LFCQ+DRAILCRECD PIH ANE T KH+RFLLTG+K++A+ + Y P  S   
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAY-PRASNSN 120

Query: 121 PVGSGGRVVSESKSKGSVKKSAAVSNAPTICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180
              + GR  +  KS  S   S+A +   T    +   N    I          G      
Sbjct: 121 SAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSG-----S 180

Query: 181 GGGSASSISEYLMETLPGWHFEDFLDSSVPPPFVEFDEGV 221
           G G   SISEYLMETLPGW  ED L+    P  V +++ +
Sbjct: 181 GSGCTGSISEYLMETLPGWRVEDLLEH---PSCVSYEDNI 211

[Close]

BLAST of Lsi08G013480 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-31
Identity = 69/150 (46.00%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEK  A V C ADEAALC  CD  +H ANKLASKH+R   L   + + P CD+
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYA------- 120
           C+E+  F+FC +DRA+LCR+CD+ IH AN  +  H RFL TGIK+  T+ + +       
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 PPPSGEKPVGSGGRVVSESKSKGSVKKSAA 144
           P PS  +      ++ ++S S+   + S+A
Sbjct: 121 PEPSNNQQ--KANQIPAKSTSQQQQQPSSA 147

[Close]

BLAST of Lsi08G013480 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein )

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-31
Identity = 69/150 (46.00%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQCDVCEK  A V C ADEAALC  CD  +H ANKLASKH+R   L   + + P CD+
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLTATAALYA------- 120
           C+E+  F+FC +DRA+LCR+CD+ IH AN  +  H RFL TGIK+  T+ + +       
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 PPPSGEKPVGSGGRVVSESKSKGSVKKSAA 144
           P PS  +      ++ ++S S+   + S+A
Sbjct: 121 PEPSNNQQ--KANQIPAKSTSQQQQQPSSA 147

[Close]

BLAST of Lsi08G013480 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 132.9 bits (333), Expect = 4.4e-31
Identity = 61/105 (58.10%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHRANKLASKHRRFSLLRPDAGEAPVCDV 60
           MKIQC+VCE  +A V C ADEAALC  CD ++H ANKLA KH+R   L   A   P CD+
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKL 106
           C+E  GF FC QDRA+LCR+CD  IH+ N     H RFLLTGIK+
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104

The following BLAST results are available for this feature:

BLAST of Lsi08G013480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQZ7	1.0e-61	42.32	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q0IGM7	2.5e-47	49.09	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q96288	3.6e-30	46.00	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q9SYM2	6.2e-30	58.10	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q9SID1	2.0e-28	53.21	B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2	[more]

BLAST of Lsi08G013480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VI96	2.3e-160	91.15	B-box zinc finger protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3BBW0	2.3e-160	91.15	B-box zinc finger protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488017 PE=4 S...	[more]
A0A0A0LL53	1.5e-159	90.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365080 PE=4 SV=1	[more]
A0A6J1CQY0	9.6e-143	83.17	B-box zinc finger protein 21-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1CSK3	1.3e-142	83.44	B-box zinc finger protein 21-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Lsi08G013480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885493.1	8.3e-165	94.12	B-box zinc finger protein 20-like [Benincasa hispida]	[more]
XP_008444771.1	4.7e-160	91.15	PREDICTED: B-box zinc finger protein 20-like [Cucumis melo] >KAA0065189.1 B-box ...	[more]
XP_004152665.1	3.1e-159	90.85	B-box zinc finger protein 20 [Cucumis sativus] >KGN62650.1 hypothetical protein ...	[more]
XP_022144185.1	2.0e-142	83.17	B-box zinc finger protein 21-like isoform X1 [Momordica charantia]	[more]
XP_022144186.1	2.6e-142	83.44	B-box zinc finger protein 21-like isoform X2 [Momordica charantia]	[more]

BLAST of Lsi08G013480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75540.1	7.5e-63	42.32	salt tolerance homolog2	[more]
AT4G39070.1	1.8e-48	49.09	B-box zinc finger family protein	[more]
AT1G06040.2	2.6e-31	46.00	B-box zinc finger family protein	[more]
AT1G06040.1	2.6e-31	46.00	B-box zinc finger family protein	[more]
AT1G78600.1	4.4e-31	58.10	light-regulated zinc finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 53..100 e-value: 1.9E-13 score: 60.7 coord: 4..47 e-value: 1.4E-6 score: 37.9
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 4..44 e-value: 2.4E-5 score: 24.4 coord: 54..96 e-value: 1.3E-5 score: 25.2
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 9.740818
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 53..100 score: 9.91151
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..94 e-value: 5.2E-10 score: 41.7
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..304
None	No IPR available	PANTHER	PTHR31832:SF66	B-BOX ZINC FINGER PROTEIN 19	coord: 1..304
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 57..100 e-value: 5.52071E-16 score: 68.4783
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 2.83476E-15 score: 66.5523

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G013480.1	Lsi08G013480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0010117	photoprotection
biological_process	GO:1905157	positive regulation of photosynthesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009641	shade avoidance
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0008270	zinc ion binding