
Lsi08G013200 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTATTCAGCACTTGGAGTGTGGAGCTTTTCGCTTTTCTCACACGTCAATGCATTAATAAATTGCAGTTAGCTTAGCTACCAACCAACGAACCCTAATTTTCCATAGTGCGAGTTCGTCGTGTCAAAGACGCTATAGCCAGTCGATATCGCAAAATCTTTTGAGGATTGGATTAACAATTCCACCACGATTTTGGTTCTGTCTCAACGTGATCATTACAATAATACGATTAATTTAATGCTCAGTGGGTTCAGTTCTGTAGCAATGAAGCTCGCTAATGCTCTCATTAATGGCGAAACTAATTCCCCATTTCATTATTTTACTGACATCACATACCCTTTGCCCGCCCCATTACAATTGGGGTGCGATTTCAACGAGTTCCCATTAATTCCAAGGACGGGCCCAAACAGGGCTTCAAATTAATACCTCATTTCTTCACCAACTCTCTGAGCTTGCGATTTCTTAGAGGGTATCGGGTTTTAGGGAAATTTTAGGGTTAGAAGAGAGAATCGAGAAGAAATGAAGGTACCCAGGAGGCCGATTCATGCAATTACGACATGGGTTCGGAGGCAACCGCCGAAGATGAAAGCGTTTTTGGGAGTGATGTCTGCGATTATCTCTCTTGTTCTTCTCTATGTGATGGTTCATGATCACAACAAGCTTTTTGTGGCTGCTGAGGCTGTTCATGCCATTGGAATTGCAGTTCTTATATATAAGCTCATGAAGGAGAGGAGTTGTGCAGGTATAATTTCGATGTCTCTGTAATCTTAGTTTGAATTTCTCTTTATTTTTCTTGGTTTGGAGCTCTTAGTCCATTTCTTTTGGCTTTGATTTGATCAGTGTTACTTAATTGAGTTTCTTTCGAGCTTGATATTAACTAGTTAATGATGGAATTGGTTTTTGTTTCGGTTTTTGATGGTTAGTTGGTTCAGCTTCTGGTTGTTGTTTCTGATTTTAATGTTTGGGTTTGCCCTTTGATCTGGATTGCGCTTTACTTTCAACAATTTAGAGTAAACTTGAGTTCTATATCCATTGTTTTTTTCTTTTTTCTGCAGGTCTTTCGCTCAAGTCACAGGAATTAACGGCTTATTTTCTAGCTGCTAGACTCTATTGCAGCTTTGTGATCGAATATGATGTGCACACATTTCTTGATTTGGCTACTTTAGTAGCAACTCTTTGGGTCATTTACATGATTCGTTATAAGCTCAAAGCCAGCTACATGAGAGACAAAGATAATTTTAAAGTTCTATACTTGGTGAGTCTAATTCTTTGGGTTCTTCATCAAGTTCTGCAAAATTGTTGTGGGTTGAAACCTTTGAGTGACCTTTCACAAATATTTGCATATATGTACTGAATCAAAACCACTTCCTAAAATGGAACGATTTGCTTTCTTTGCCGAAACTTTTGGCTTACTTTCTGAAGCAAGTCTACAAATTTGATTTCTTTGGGATAAATGCCTCTGTGTTTTGCAAGTCATGTGAGTTTTCATCTTTGAGACGTTTGTTTACTGAAAATGCAGAATGAAGGCTGGCATTGGCTTTGTTTTAACAGTCCTTATCAATGTTTTAAAAGGCTTTTTTAGTTCAATACTCGATGGTAATGTTCAACTTATAGCTCTTCGTAACTCTATACATTGCATTATTATTCTTGGATGCAGGTGGTACCATGTATTTTACTCGCCATTTTGATTCATCCGACACCTGCAAGAGTTTCTTTTTTACAAAGAATTTTCTGGGCTTTTTGTGTTTACCTTGAAGCTGTTTCTGTTCTACCTCAGTTGCGAGTCATGCAGAACATAAAGGTTCCTTTCCCCTTTATTTCTGTTCTTTCTGTTCTTTCATTTTTTTTTCTCAATGAAAGGTTTGGTCTATCATTGCAAAAAAAAAAAAAAAACGACAATTAATTTTACATATTCTTCCATATGTTCCTTATTTGAAAATTGTCCAAAAACTAATCAATAAGCTGTACAAATTTCAACTTTAGAGAACACTCAAAACCATGTCACAATCAAGGCACAACAACAAAAACCATAATTTGGCCTAGTGGTTAATAAGAGCTCATGTAAATAGTAAAAGGGTTAGAGGGAACGAGTTCAAGTCATGGTGGTTACCTTACCTAGGATTTGATATCTTAACACTCTCAGATATTCACATATTAAGTCACAAGAACCAAACTATGAAAATTACCTAAACTTAGCTACAGGACCAAGTAGGTAAAAGAATTAAATTTGATAAAGTTGAAAGTATAAGGTTAGCTACAGGACCAAGTAGGTAAAAGAATTAAATTTGATAAAGTTGAAAGTATAAGGTTACCATTGTCTCGTCTCGCTGAGTAAATCTAAGGTAAAAACTAGATGAATCCCTCAAAAAGAGTTTTGCTCCAGAGTACAAAGTTCAAAATTGTTTATATTTAAATTTTGTTTCTTTTGCAACTCTCTAAATTTTGTATTCCCTTCATTTCTTGCTTCCAATTGTCCAGATCGTTGAGCCATTCACTGCACACTATGTATTTGCCTTGGGAGTTGCCAGATTCCTGAGCTGTGCGCATTGGGTTCTTCAGGTTTTTCCATAAATCTCAAACTTCATATGTTGCATCTGTACGTGTAAATTTTCAAAATTATTCAAATGTTGTGGTAGTGAGCTTTTATTCATTTCTTTTAAATTTTGATTTTGATACCCAAAATTCTATTCTGGTCTTTTGACTTTCAAAATTTCATTCTAGTCCTAAGTTTTTTAAAACATGAGGTAATGTTACACGTTATCCATAATTTATGTGTACATCTTACCGTAATTGACTGCTACGTTTATGGTATGGTTGGGACTATATTTGTACTTCAATGTGAACTCGAGTTCTAAAATTGTGCTTTCCAAGTCAAAAGGGTCAAAATATGAAGTGATGTAAATTCAAGGGGACTAAAATCAACACTGTTAAAGTTCCTATACCAAAATGAAAAGTGGATCAAAGTTGAAGGATGAAAACCGTATTTTAAACTTACCTCCTTAACCAAAGGCACGACTCGATTGAGATTTTGTTGCATGTTCTTTACGTTAACTTTCGCCCATATAATTTGGATATACATAGACTTGATTTATGGTTAATGTTTTTTTTCCCTTGTTCTTGTAATAATAATGCACAGATGGTAGCAACTCGTGGGGGGCTGCTGGTTGCGCTAGGAACTGGATTTTGGCCACCTATGGTTCTCCTTGCAGAAATTGTCCAAACTTTTGTTCTTGCAGATTTTTGTTATTACTATGTCAAAAGGTTGGTGCTCTACTTCCTTTCATGATTTAAATTTGTATTGCTATTGGATTGGTTCCTAAAGTTTTTATCAATTTTCCTTGTTTTGGTGTGTCAATTTTCAAAATCTTAATTCTGGGCAATCTAAATATCTTAGCTTTAGTCTAAATCCTATCTTATAACTTCTATGTTTAGTTTTGGTGGTGAAAATTGTGATGTGGATTCAATATTACATTATAAATGGAGTGTTATCATGTATTCATTGACTCATAAATAAGATTTTTATGGCAATGACTAAAATTGGGTCAAATCATCTTTTACTTCGTTTTTCTTCGTGCTATTGATAAGTTTGTGAGCTCTTTCAATACTGTTGTTGTTGCAGTGTTCTTGGCGGTCAGCTCGTTGTACGCCTCCCTTCCGGAGTAGTCTGAGATAGAAATCAGACCAGAGGTGGCTGCCTGCTGGCATAGTGTGAACAGCGTTCGTTGACGATCTGTACATATTTTTTTTTTATCCTTTGTAGTGAACGCTGTGACTGAACTGGAAAAAGAAAAAATGCTTCCTAAACTGGTGCATGAGCATCCTACATTATAGTCGCAAAAATAATAAAGGATGCTATTGACATTTCA CTTTTATTCAGCACTTGGAGTGTGGAGCTTTTCGCTTTTCTCACACGTCAATGCATTAATAAATTGCAGTTAGCTTAGCTACCAACCAACGAACCCTAATTTTCCATAGTGCGAGTTCGTCGTGTCAAAGACGCTATAGCCAGTCGATATCGCAAAATCTTTTGAGGATTGGATTAACAATTCCACCACGATTTTGGTTCTGTCTCAACGTGATCATTACAATAATACGATTAATTTAATGCTCAGTGGGTTCAGTTCTGTAGCAATGAAGCTCGCTAATGCTCTCATTAATGGCGAAACTAATTCCCCATTTCATTATTTTACTGACATCACATACCCTTTGCCCGCCCCATTACAATTGGGGTGCGATTTCAACGAGTTCCCATTAATTCCAAGGACGGGCCCAAACAGGGCTTCAAATTAATACCTCATTTCTTCACCAACTCTCTGAGCTTGCGATTTCTTAGAGGGTATCGGGTTTTAGGGAAATTTTAGGGTTAGAAGAGAGAATCGAGAAGAAATGAAGGTACCCAGGAGGCCGATTCATGCAATTACGACATGGGTTCGGAGGCAACCGCCGAAGATGAAAGCGTTTTTGGGAGTGATGTCTGCGATTATCTCTCTTGTTCTTCTCTATGTGATGGTTCATGATCACAACAAGCTTTTTGTGGCTGCTGAGGCTGTTCATGCCATTGGAATTGCAGTTCTTATATATAAGCTCATGAAGGAGAGGAGTTGTGCAGGTCTTTCGCTCAAGTCACAGGAATTAACGGCTTATTTTCTAGCTGCTAGACTCTATTGCAGCTTTGTGATCGAATATGATGTGCACACATTTCTTGATTTGGCTACTTTAGTAGCAACTCTTTGGGTCATTTACATGATTCGTTATAAGCTCAAAGCCAGCTACATGAGAGACAAAGATAATTTTAAAGTTCTATACTTGGTGGTACCATGTATTTTACTCGCCATTTTGATTCATCCGACACCTGCAAGAGTTTCTTTTTTACAAAGAATTTTCTGGGCTTTTTGTGTTTACCTTGAAGCTATCGTTGAGCCATTCACTGCACACTATGTATTTGCCTTGGGAGTTGCCAGATTCCTGAGCTGTGCGCATTGGGTTCTTCAGATGGTAGCAACTCGTGGGGGGCTGCTGGTTGCGCTAGGAACTGGATTTTGGCCACCTATGGTTCTCCTTGCAGAAATTGTCCAAACTTTTGTTCTTGCAGATTTTTGTTATTACTATGTCAAAAGTGTTCTTGGCGGTCAGCTCGTTGTACGCCTCCCTTCCGGAGTAGTCTGAGATAGAAATCAGACCAGAGGTGGCTGCCTGCTGGCATAGTGTGAACAGCGTTCGTTGACGATCTGTACATATTTTTTTTTTATCCTTTGTAGTGAACGCTGTGACTGAACTGGAAAAAGAAAAAATGCTTCCTAAACTGGTGCATGAGCATCCTACATTATAGTCGCAAAAATAATAAAGGATGCTATTGACATTTCA ATGAAGGTACCCAGGAGGCCGATTCATGCAATTACGACATGGGTTCGGAGGCAACCGCCGAAGATGAAAGCGTTTTTGGGAGTGATGTCTGCGATTATCTCTCTTGTTCTTCTCTATGTGATGGTTCATGATCACAACAAGCTTTTTGTGGCTGCTGAGGCTGTTCATGCCATTGGAATTGCAGTTCTTATATATAAGCTCATGAAGGAGAGGAGTTGTGCAGGTCTTTCGCTCAAGTCACAGGAATTAACGGCTTATTTTCTAGCTGCTAGACTCTATTGCAGCTTTGTGATCGAATATGATGTGCACACATTTCTTGATTTGGCTACTTTAGTAGCAACTCTTTGGGTCATTTACATGATTCGTTATAAGCTCAAAGCCAGCTACATGAGAGACAAAGATAATTTTAAAGTTCTATACTTGGTGGTACCATGTATTTTACTCGCCATTTTGATTCATCCGACACCTGCAAGAGTTTCTTTTTTACAAAGAATTTTCTGGGCTTTTTGTGTTTACCTTGAAGCTATCGTTGAGCCATTCACTGCACACTATGTATTTGCCTTGGGAGTTGCCAGATTCCTGAGCTGTGCGCATTGGGTTCTTCAGATGGTAGCAACTCGTGGGGGGCTGCTGGTTGCGCTAGGAACTGGATTTTGGCCACCTATGGTTCTCCTTGCAGAAATTGTCCAAACTTTTGTTCTTGCAGATTTTTGTTATTACTATGTCAAAAGTGTTCTTGGCGGTCAGCTCGTTGTACGCCTCCCTTCCGGAGTAGTCTGA MKVPRRPIHAITTWVRRQPPKMKAFLGVMSAIISLVLLYVMVHDHNKLFVAAEAVHAIGIAVLIYKLMKERSCAGLSLKSQELTAYFLAARLYCSFVIEYDVHTFLDLATLVATLWVIYMIRYKLKASYMRDKDNFKVLYLVVPCILLAILIHPTPARVSFLQRIFWAFCVYLEAIVEPFTAHYVFALGVARFLSCAHWVLQMVATRGGLLVALGTGFWPPMVLLAEIVQTFVLADFCYYYVKSVLGGQLVVRLPSGVV Homology
BLAST of Lsi08G013200 vs. ExPASy Swiss-Prot
Match: Q09473 (ER lumen protein-retaining receptor erd-2.2 OS=Caenorhabditis elegans OX=6239 GN=erd-2.2 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.8e-22 Identity = 74/223 (33.18%), Postives = 119/223 (53.36%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy Swiss-Prot
Match: P48583 (ER lumen protein-retaining receptor erd-2.1 OS=Caenorhabditis elegans OX=6239 GN=erd-2.1 PE=3 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 2.4e-22 Identity = 74/212 (34.91%), Postives = 112/212 (52.83%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy Swiss-Prot
Match: Q611C8 (ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.3e-22 Identity = 69/212 (32.55%), Postives = 109/212 (51.42%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy Swiss-Prot
Match: Q6PAB8 (ER lumen protein-retaining receptor 1-A OS=Xenopus laevis OX=8355 GN=kdelr1-a PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.2e-19 Identity = 73/214 (34.11%), Postives = 111/214 (51.87%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy Swiss-Prot
Match: O76767 (ER lumen protein-retaining receptor OS=Drosophila melanogaster OX=7227 GN=KdelR PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 9.3e-19 Identity = 72/217 (33.18%), Postives = 113/217 (52.07%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy TrEMBL
Match: A0A5A7VFR1 (Putative ER lumen protein-retaining receptor C28H8.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005020 PE=3 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 5.9e-133 Identity = 251/273 (91.94%), Postives = 255/273 (93.41%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy TrEMBL
Match: A0A0A0LRN5 (ER lumen protein retaining receptor family protein OS=Cucumis sativus OX=3659 GN=Csa_2G368280 PE=3 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 251/273 (91.94%), Postives = 255/273 (93.41%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy TrEMBL
Match: A0A1S3BAQ8 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucumis melo OX=3656 GN=LOC103488042 PE=3 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 5.0e-132 Identity = 250/273 (91.58%), Postives = 254/273 (93.04%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy TrEMBL
Match: A0A6J1HEP4 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucurbita moschata OX=3662 GN=LOC111462365 PE=3 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129 Identity = 245/273 (89.74%), Postives = 254/273 (93.04%), Query Frame = 0
BLAST of Lsi08G013200 vs. ExPASy TrEMBL
Match: A0A6J1KCJ9 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucurbita maxima OX=3661 GN=LOC111492053 PE=3 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 1.5e-128 Identity = 244/273 (89.38%), Postives = 253/273 (92.67%), Query Frame = 0
BLAST of Lsi08G013200 vs. NCBI nr
Match: KAA0065166.1 (putative ER lumen protein-retaining receptor C28H8.4 [Cucumis melo var. makuwa]) HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-132 Identity = 251/273 (91.94%), Postives = 255/273 (93.41%), Query Frame = 0
BLAST of Lsi08G013200 vs. NCBI nr
Match: XP_038886586.1 (ER lumen protein-retaining receptor erd-2.2-like [Benincasa hispida]) HSP 1 Score: 483.0 bits (1242), Expect = 1.6e-132 Identity = 250/273 (91.58%), Postives = 257/273 (94.14%), Query Frame = 0
BLAST of Lsi08G013200 vs. NCBI nr
Match: XP_004152650.1 (ER lumen protein-retaining receptor erd-2.2 [Cucumis sativus] >KGN62676.1 hypothetical protein Csa_022026 [Cucumis sativus]) HSP 1 Score: 482.3 bits (1240), Expect = 2.7e-132 Identity = 251/273 (91.94%), Postives = 255/273 (93.41%), Query Frame = 0
BLAST of Lsi08G013200 vs. NCBI nr
Match: XP_008444804.1 (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Cucumis melo]) HSP 1 Score: 480.3 bits (1235), Expect = 1.0e-131 Identity = 250/273 (91.58%), Postives = 254/273 (93.04%), Query Frame = 0
BLAST of Lsi08G013200 vs. NCBI nr
Match: XP_022961664.1 (putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita moschata] >XP_023547199.1 putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita pepo subsp. pepo] >KAG6598499.1 ER lumen protein-retaining receptor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029435.1 ER lumen protein-retaining receptor [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129 Identity = 245/273 (89.74%), Postives = 254/273 (93.04%), Query Frame = 0
BLAST of Lsi08G013200 vs. TAIR 10
Match: AT1G75760.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 385.6 bits (989), Expect = 3.2e-107 Identity = 196/273 (71.79%), Postives = 230/273 (84.25%), Query Frame = 0
BLAST of Lsi08G013200 vs. TAIR 10
Match: AT2G21190.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 372.1 bits (954), Expect = 3.7e-103 Identity = 187/269 (69.52%), Postives = 221/269 (82.16%), Query Frame = 0
BLAST of Lsi08G013200 vs. TAIR 10
Match: AT4G38790.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 370.5 bits (950), Expect = 1.1e-102 Identity = 188/269 (69.89%), Postives = 220/269 (81.78%), Query Frame = 0
BLAST of Lsi08G013200 vs. TAIR 10
Match: AT1G19970.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 367.5 bits (942), Expect = 9.0e-102 Identity = 181/273 (66.30%), Postives = 225/273 (82.42%), Query Frame = 0
BLAST of Lsi08G013200 vs. TAIR 10
Match: AT3G25160.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 286.6 bits (732), Expect = 2.0e-77 Identity = 147/263 (55.89%), Postives = 196/263 (74.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|