Lsi08G011680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G011680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	EG45-like domain containing protein
Location	chr08: 20305837 .. 20306775 (-)
RNA-Seq Expression	Lsi08G011680
Synteny	Lsi08G011680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTGGGATGAAGAAAACGGATTATTGAATTACGTTTGAAAATTTATCACAGGAATTGAATTGGAATTTGGAACGACATGTCGGATCCTCTGTTTCTTTCTCGATTCCTCTTCTCCGTCTTCTTCGTCGTTCACCTCTTTCATCTCTCTCATGGAGATGTCGGCAGTGCTACATCTTACGGTCCTCCTTATTTACGTAAGTTAATTCACAAATTTTCCATTCATTTTCTTCAATTTTTGAATTTCAATCAATGAAATTTTACACAGCCACCGCTTGTGCCGGAAACGATTTCTCGATGTTTCCGTCGACAAACATGTTCGCGGCGGCCGGAGAGGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTGAGCTCCGCCTTACCGAAGGCATGCGTTCCCGATCAGACGATTCAGATCACGATCGTGGATCGTGCGATTTCGACAGTGTCGAAGCCGGCGGTAGCGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATCGTTAAAGGAGCTACGTCGCTCGTTAACATCGAATTCATGCAGTGAGTGGTTTGGATTTTTTTTTTTTTTTCAAAATTTTAGTGAGTTTTGAATTGATTGGAGTGGAATTTTGTGTCGATTTTTGCAGGGTTTGAATTGAAAATTGATGGAGAAAGGTTGAATATTTAAGGGTTTTTTTTTTTTGGTGACTGGTTCAAAATTGTAGAACTGTGAGGAAGATGAAGTCCATGTGTTCGGTTTCCGCCATTGACACACGCACCTAATTTCTTCTATACTTTTCCCTTATTAATTGTATATTGGAAAAAAAAAACAACTAAATAAACATTTTGTATGTTCTACTAATATTTATAAAAGATGTTTGAAGATATTTATGGATATATAATATCAATATTAAACCTTTAATTTAAAGATA

mRNA sequence

TTTTTGGGATGAAGAAAACGGATTATTGAATTACGAATTGAATTGGAATTTGGAACGACATGTCGGATCCTCTGTTTCTTTCTCGATTCCTCTTCTCCGTCTTCTTCGTCGTTCACCTCTTTCATCTCTCTCATGGAGATGTCGGCAGTGCTACATCTTACGGTCCTCCTTATTTACCCACCGCTTGTGCCGGAAACGATTTCTCGATGTTTCCGTCGACAAACATGTTCGCGGCGGCCGGAGAGGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTGAGCTCCGCCTTACCGAAGGCATGCGTTCCCGATCAGACGATTCAGATCACGATCGTGGATCGTGCGATTTCGACAGTGTCGAAGCCGGCGGTAGCGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATCGTTAAAGGAGCTACGTCGCTCGTTAACATCGAATTCATGCAGGTTTGAATTGAAAATTGATGGAGAAAGGTTGAATATTTAAGGGTTTTTTTTTTTTGGTGACTGGTTCAAAATTGTAGAACTGTGAGGAAGATGAAGTCCATGTGTTCGGTTTCCGCCATTGACACACGCACCTAATTTCTTCTATACTTTTCCCTTATTAATTGTATATTGGAAAAAAAAAACAACTAAATAAACATTTTGTATGTTCTACTAATATTTATAAAAGATGTTTGAAGATATTTATGGATATATAATATCAATATTAAACCTTTAATTTAAAGATA

Coding sequence (CDS)

ATGTCGGATCCTCTGTTTCTTTCTCGATTCCTCTTCTCCGTCTTCTTCGTCGTTCACCTCTTTCATCTCTCTCATGGAGATGTCGGCAGTGCTACATCTTACGGTCCTCCTTATTTACCCACCGCTTGTGCCGGAAACGATTTCTCGATGTTTCCGTCGACAAACATGTTCGCGGCGGCCGGAGAGGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTGAGCTCCGCCTTACCGAAGGCATGCGTTCCCGATCAGACGATTCAGATCACGATCGTGGATCGTGCGATTTCGACAGTGTCGAAGCCGGCGGTAGCGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATCGTTAAAGGAGCTACGTCGCTCGTTAACATCGAATTCATGCAGGTTTGA

Protein sequence

MSDPLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAAGEGIWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAYKSIVKGATSLVNIEFMQV

Homology

[Close]

BLAST of Lsi08G011680 vs. ExPASy Swiss-Prot
Match: Q9ZP41 (EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.9e-07
Identity = 41/122 (33.61%), Postives = 56/122 (45.90%), Query Frame = 0


Query: 24  SHGDVGSATSYGPPYLPTACAG--NDFSMFPSTNMFAAAGEGIWENGAACGRQYLVRC-- 83
           ++   G+AT Y PPY+P+AC G  ND        M AAA   IW NGA C + + V+C  
Sbjct: 22  AYASEGTATFYTPPYVPSACNGYKND------GVMIAAASYAIWNNGAVCNKSFRVKCTG 81

Query: 84  -LSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAYKSIVKGATSLVNIEF 141
             +   P  C    ++ + IVD        PA    T+ LS  A+  I       + IEF
Sbjct: 82  ATNQGTPHPC-RGGSVLVKIVDLC------PAGCQATIDLSQEAFSQIANPDAGKIKIEF 130

[Close]

BLAST of Lsi08G011680 vs. ExPASy Swiss-Prot
Match: Q9ZV52 (EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 4.2e-05
Identity = 27/89 (30.34%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 14  VFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAAGEGIWENGAACGR 73
           + F   L  ++    G A  Y PPY  +AC G          +       +W+NG ACGR
Sbjct: 13  IVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQ-----RETLVVGVKNNLWQNGRACGR 72

Query: 74  QYLVRCLSSA--LPKACVPDQTIQITIVD 101
           +Y VRC+ +     +AC   +T+ + +VD
Sbjct: 73  RYRVRCIGATYNFDRACT-GRTVDVKVVD 95

[Close]

BLAST of Lsi08G011680 vs. ExPASy Swiss-Prot
Match: Q9M0C2 (Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=EGC1 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.3e-05
Identity = 40/133 (30.08%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 14  VFF---VVHLFHLSHGDVGSA---TSYGPPYLPTACAGNDFSMFPSTNMFAAAGEGIWEN 73
           VFF   +V LF  S+   G A   TSY P Y  T              M AAA + +W+N
Sbjct: 6   VFFSTVLVFLFSFSYATPGIATFYTSYTPCYRGT----------QEGVMIAAASDTLWDN 65

Query: 74  GAACGRQYLVRCLS--SALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAYKS 133
           G  CG+ + V+C    +A+P  C   +++++ IVD        P+   +T+ LS  A+  
Sbjct: 66  GRVCGKMFTVKCSGPRNAVPHPCT-GKSVKVKIVDHC------PSGCASTLDLSREAFAQ 121

Query: 134 IVKGATSLVNIEF 139
           I      ++NI++
Sbjct: 126 IANPVAGIINIDY 121

[Close]

BLAST of Lsi08G011680 vs. ExPASy TrEMBL
Match: A0A1S3BC04 (EG45-like domain containing protein OS=Cucumis melo OX=3656 GN=LOC103488275 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.5e-55
Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 4   PLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAAGEG 63
           P FLSR LFS+FF+ HLFHLSHGDVGSAT YGPPYLPTAC GNDFSMFP+ NMF AAGEG
Sbjct: 6   PPFLSRCLFSIFFIAHLFHLSHGDVGSATHYGPPYLPTACFGNDFSMFPTNNMFGAAGEG 65

Query: 64  IWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAY 123
           IWENGAACGRQY VRC SSA+P +CV DQTI+ITIVDRA+STV+K AVADTTM LSTTAY
Sbjct: 66  IWENGAACGRQYRVRCFSSAVPNSCVRDQTIRITIVDRAVSTVAKAAVADTTMTLSTTAY 125

Query: 124 KSIVKGATSLVNIEFMQ 141
           K+IV+G+ SLVNIE+ Q
Sbjct: 126 KAIVQGSASLVNIEYTQ 142

[Close]

BLAST of Lsi08G011680 vs. ExPASy TrEMBL
Match: A0A5A7VHL3 (EG45-like domain containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002800 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.5e-55
Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 4   PLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAAGEG 63
           P FLSR LFS+FF+ HLFHLSHGDVGSAT YGPPYLPTAC GNDFSMFP+ NMF AAGEG
Sbjct: 6   PPFLSRCLFSIFFIAHLFHLSHGDVGSATHYGPPYLPTACFGNDFSMFPTNNMFGAAGEG 65

Query: 64  IWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAY 123
           IWENGAACGRQY VRC SSA+P +CV DQTI+ITIVDRA+STV+K AVADTTM LSTTAY
Sbjct: 66  IWENGAACGRQYRVRCFSSAVPNSCVRDQTIRITIVDRAVSTVAKAAVADTTMTLSTTAY 125

Query: 124 KSIVKGATSLVNIEFMQ 141
           K+IV+G+ SLVNIE+ Q
Sbjct: 126 KAIVQGSASLVNIEYTQ 142

[Close]

BLAST of Lsi08G011680 vs. ExPASy TrEMBL
Match: A0A6J1GJR6 (EG45-like domain containing protein OS=Cucurbita moschata OX=3662 GN=LOC111454490 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.7e-52
Identity = 106/140 (75.71%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MSDPLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAA 60
           MS PLFL     SVFF+ HLFHLSHGD+G+AT Y PPYLPTACAGND S+FP++N+FAAA
Sbjct: 1   MSKPLFL-----SVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASNLFAAA 60

Query: 61  GEGIWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLST 120
           GEGIWENGAACGRQYLVRC S+A+P +CVPDQTIQ+TIVDRAISTVSKPA A TTMVLST
Sbjct: 61  GEGIWENGAACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLST 120

Query: 121 TAYKSIVKGATSLVNIEFMQ 141
           TAYKSIV+   + VN+EF +
Sbjct: 121 TAYKSIVQRNVAFVNVEFRE 135

[Close]

BLAST of Lsi08G011680 vs. ExPASy TrEMBL
Match: A0A6J1K9D4 (EG45-like domain containing protein OS=Cucurbita maxima OX=3661 GN=LOC111491845 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51
Identity = 105/141 (74.47%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 1   MSDPLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAA 60
           MS+PLFLS FLFS FF  HLF   HGD+G+AT Y  PYLPTACAG D S+FP++N+FAAA
Sbjct: 1   MSNPLFLSGFLFSAFFTAHLFQFCHGDLGTATFYTAPYLPTACAGKDTSVFPASNLFAAA 60

Query: 61  GEGIWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLST 120
           GEGIWENGAACGRQY VRC S+ +PK+CVPDQ IQ+TIVDRAISTV+KP   DTTMVLST
Sbjct: 61  GEGIWENGAACGRQYQVRCFSADVPKSCVPDQIIQLTIVDRAISTVTKPTRGDTTMVLST 120

Query: 121 TAYKSIVKGATSLVNIEFMQV 142
           TAYKSIV+G+ SLVNIEF +V
Sbjct: 121 TAYKSIVQGSVSLVNIEFREV 141

[Close]

BLAST of Lsi08G011680 vs. ExPASy TrEMBL
Match: A0A6J1HHJ2 (EG45-like domain containing protein OS=Cucurbita moschata OX=3662 GN=LOC111462996 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-51
Identity = 106/141 (75.18%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   MSDPLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAA 60
           MS+PLFLS FLFSVFF  HLF   HGD+G+AT Y  PYLPTACAG D S FP+ N+FAAA
Sbjct: 1   MSNPLFLSGFLFSVFFAAHLFQFCHGDLGTATFYTAPYLPTACAGKDTSAFPANNLFAAA 60

Query: 61  GEGIWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLST 120
           GEGIWENGAACGRQY VRC S+ +PK+CVPDQ IQ+TIVDRAISTV+KPA  DTTMVLST
Sbjct: 61  GEGIWENGAACGRQYQVRCFSADVPKSCVPDQIIQVTIVDRAISTVTKPARGDTTMVLST 120

Query: 121 TAYKSIVKGATSLVNIEFMQV 142
           TAYKSIV+ + SLVNIEF +V
Sbjct: 121 TAYKSIVQRSVSLVNIEFREV 141

[Close]

BLAST of Lsi08G011680 vs. NCBI nr
Match: XP_038886390.1 (EG45-like domain containing protein [Benincasa hispida])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 121/140 (86.43%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MSDPLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAA 60
           MS+PL    FLFS+FFV HLFHLSHGDVG+AT YGPPYLPTACAGNDFSMFP+TN+FAAA
Sbjct: 1   MSNPL----FLFSIFFVAHLFHLSHGDVGTATPYGPPYLPTACAGNDFSMFPTTNLFAAA 60

Query: 61  GEGIWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLST 120
           GEGIWENGAACGRQYLVRCLSSA+PKACVPDQTIQ+TIVDRAISTVSK  V DTTM LST
Sbjct: 61  GEGIWENGAACGRQYLVRCLSSAVPKACVPDQTIQVTIVDRAISTVSKAVVPDTTMTLST 120

Query: 121 TAYKSIVKGATSLVNIEFMQ 141
           TAYKSIVKGATSLV IEF Q
Sbjct: 121 TAYKSIVKGATSLVKIEFTQ 136

[Close]

BLAST of Lsi08G011680 vs. NCBI nr
Match: KAA0064959.1 (EG45-like domain containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 7.2e-55
Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 4   PLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAAGEG 63
           P FLSR LFS+FF+ HLFHLSHGDVGSAT YGPPYLPTAC GNDFSMFP+ NMF AAGEG
Sbjct: 6   PPFLSRCLFSIFFIAHLFHLSHGDVGSATHYGPPYLPTACFGNDFSMFPTNNMFGAAGEG 65

Query: 64  IWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAY 123
           IWENGAACGRQY VRC SSA+P +CV DQTI+ITIVDRA+STV+K AVADTTM LSTTAY
Sbjct: 66  IWENGAACGRQYRVRCFSSAVPNSCVRDQTIRITIVDRAVSTVAKAAVADTTMTLSTTAY 125

Query: 124 KSIVKGATSLVNIEFMQ 141
           K+IV+G+ SLVNIE+ Q
Sbjct: 126 KAIVQGSASLVNIEYTQ 142

[Close]

BLAST of Lsi08G011680 vs. NCBI nr
Match: XP_008445151.1 (PREDICTED: EG45-like domain containing protein [Cucumis melo] >XP_008445152.1 PREDICTED: EG45-like domain containing protein [Cucumis melo] >XP_016899971.1 PREDICTED: EG45-like domain containing protein [Cucumis melo])

HSP 1 Score: 224.2 bits (570), Expect = 7.2e-55
Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 4   PLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAAGEG 63
           P FLSR LFS+FF+ HLFHLSHGDVGSAT YGPPYLPTAC GNDFSMFP+ NMF AAGEG
Sbjct: 6   PPFLSRCLFSIFFIAHLFHLSHGDVGSATHYGPPYLPTACFGNDFSMFPTNNMFGAAGEG 65

Query: 64  IWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAY 123
           IWENGAACGRQY VRC SSA+P +CV DQTI+ITIVDRA+STV+K AVADTTM LSTTAY
Sbjct: 66  IWENGAACGRQYRVRCFSSAVPNSCVRDQTIRITIVDRAVSTVAKAAVADTTMTLSTTAY 125

Query: 124 KSIVKGATSLVNIEFMQ 141
           K+IV+G+ SLVNIE+ Q
Sbjct: 126 KAIVQGSASLVNIEYTQ 142

[Close]

BLAST of Lsi08G011680 vs. NCBI nr
Match: KAG7020366.1 (EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 9.8e-52
Identity = 106/140 (75.71%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MSDPLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAA 60
           MS PLFL     SVFF+ HLFHLSHGD+G+AT Y PPYLPTACAGND S+FP++N+FAAA
Sbjct: 1   MSKPLFL-----SVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASNLFAAA 60

Query: 61  GEGIWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLST 120
           GEGIWENGAACGRQYLVRC S+A+P +CVPDQTIQ+TIVDRAISTVSKPA A TTMVLST
Sbjct: 61  GEGIWENGAACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLST 120

Query: 121 TAYKSIVKGATSLVNIEFMQ 141
           TAYKSIV+   + VN+EF +
Sbjct: 121 TAYKSIVQRNVAFVNVEFRE 135

[Close]

BLAST of Lsi08G011680 vs. NCBI nr
Match: XP_022951750.1 (EG45-like domain containing protein [Cucurbita moschata])

HSP 1 Score: 213.8 bits (543), Expect = 9.8e-52
Identity = 106/140 (75.71%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MSDPLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAA 60
           MS PLFL     SVFF+ HLFHLSHGD+G+AT Y PPYLPTACAGND S+FP++N+FAAA
Sbjct: 1   MSKPLFL-----SVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASNLFAAA 60

Query: 61  GEGIWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLST 120
           GEGIWENGAACGRQYLVRC S+A+P +CVPDQTIQ+TIVDRAISTVSKPA A TTMVLST
Sbjct: 61  GEGIWENGAACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLST 120

Query: 121 TAYKSIVKGATSLVNIEFMQ 141
           TAYKSIV+   + VN+EF +
Sbjct: 121 TAYKSIVQRNVAFVNVEFRE 135

[Close]

BLAST of Lsi08G011680 vs. TAIR 10
Match: AT2G18660.1 (plant natriuretic peptide A )

HSP 1 Score: 49.3 bits (116), Expect = 3.0e-06
Identity = 27/89 (30.34%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 14  VFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAAGEGIWENGAACGR 73
           + F   L  ++    G A  Y PPY  +AC G          +       +W+NG ACGR
Sbjct: 13  IVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQ-----RETLVVGVKNNLWQNGRACGR 72

Query: 74  QYLVRCLSSA--LPKACVPDQTIQITIVD 101
           +Y VRC+ +     +AC   +T+ + +VD
Sbjct: 73  RYRVRCIGATYNFDRACT-GRTVDVKVVD 95

[Close]

BLAST of Lsi08G011680 vs. TAIR 10
Match: AT4G30380.1 (Barwin-related endoglucanase )

HSP 1 Score: 48.1 bits (113), Expect = 6.6e-06
Identity = 40/133 (30.08%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 14  VFF---VVHLFHLSHGDVGSA---TSYGPPYLPTACAGNDFSMFPSTNMFAAAGEGIWEN 73
           VFF   +V LF  S+   G A   TSY P Y  T              M AAA + +W+N
Sbjct: 6   VFFSTVLVFLFSFSYATPGIATFYTSYTPCYRGT----------QEGVMIAAASDTLWDN 65

Query: 74  GAACGRQYLVRCLS--SALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAYKS 133
           G  CG+ + V+C    +A+P  C   +++++ IVD        P+   +T+ LS  A+  
Sbjct: 66  GRVCGKMFTVKCSGPRNAVPHPCT-GKSVKVKIVDHC------PSGCASTLDLSREAFAQ 121

Query: 134 IVKGATSLVNIEF 139
           I      ++NI++
Sbjct: 126 IANPVAGIINIDY 121

The following BLAST results are available for this feature:

BLAST of Lsi08G011680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZP41	9.9e-07	33.61	EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 ...	[more]
Q9ZV52	4.2e-05	30.34	EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE...	[more]
Q9M0C2	9.3e-05	30.08	Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Lsi08G011680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BC04	3.5e-55	80.29	EG45-like domain containing protein OS=Cucumis melo OX=3656 GN=LOC103488275 PE=4...	[more]
A0A5A7VHL3	3.5e-55	80.29	EG45-like domain containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A6J1GJR6	4.7e-52	75.71	EG45-like domain containing protein OS=Cucurbita moschata OX=3662 GN=LOC11145449...	[more]
A0A6J1K9D4	1.4e-51	74.47	EG45-like domain containing protein OS=Cucurbita maxima OX=3661 GN=LOC111491845 ...	[more]
A0A6J1HHJ2	2.3e-51	75.18	EG45-like domain containing protein OS=Cucurbita moschata OX=3662 GN=LOC11146299...	[more]

BLAST of Lsi08G011680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886390.1	1.3e-59	86.43	EG45-like domain containing protein [Benincasa hispida]	[more]
KAA0064959.1	7.2e-55	80.29	EG45-like domain containing protein [Cucumis melo var. makuwa]	[more]
XP_008445151.1	7.2e-55	80.29	PREDICTED: EG45-like domain containing protein [Cucumis melo] >XP_008445152.1 PR...	[more]
KAG7020366.1	9.8e-52	75.71	EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022951750.1	9.8e-52	75.71	EG45-like domain containing protein [Cucurbita moschata]	[more]

BLAST of Lsi08G011680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18660.1	3.0e-06	30.34	plant natriuretic peptide A	[more]
AT4G30380.1	6.6e-06	30.08	Barwin-related endoglucanase	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 27..141 e-value: 3.1E-16 score: 61.6
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 15..141
None	No IPR available	PANTHER	PTHR47480:SF2	EG45-LIKE DOMAIN CONTAINING PROTEIN	coord: 7..141
None	No IPR available	PANTHER	PTHR47480	EG45-LIKE DOMAIN CONTAINING PROTEIN	coord: 7..141
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 29..141 score: 11.540405

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G011680.1	Lsi08G011680.1	mRNA