Lsi08G011610 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G011610
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionV-type proton ATPase subunit c''1
Locationchr08: 20269244 .. 20271142 (+)
RNA-Seq ExpressionLsi08G011610
SyntenyLsi08G011610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCAGGAATAAAACTTTCAACTTTCTCACGCGCGCGTGGACGTTTCTCGATACTCATCCGTCGATCTCCACAATTTTCAGATCAGGAACTCTATTCCTCCAGGGTTCACACCGGCGGATTTCAGATCAAATCCAATCCCTCTCCGATTATTACTGCGTCGATTTCAGAATTAAGGTCGGAGATTCATAGGTAATCATGTCCAGCGCCGTCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGCATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGTATCTTATTCAGCACTCTTTGTGTTTTTCTTGAAGAATGTTTATTTTGTTGATTTCCTTTCTGAATGATGAGAATTTGCGCGGTTGCGAATTTGATAGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCAGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGGTGAAGCCCTAACTTTAGTTGATGAATTGTTCATTTTACTGTTGGTTGGATTGCTACTTTTGGTCGGGTTCGGATGTATAATTTGGGATTTTTATTGCTTAATTCTTGGACTGATACAACTGAGAACGAAGAAACTCGTTAGACTTTCTTAGAAATTTGAATAAATTAGAACAGAATTGAGCGCGAGCCTAGTGTTTCTGGAAAAACAGTTGTTGAATGTAATATTGTAGATTCCTTATTATTTTGTTTGGAGAATCCCATCCAGCGTCTGCCTCTACCATATTAAATGGTCCATCAAGTTTCATTGCTGAATCTAAGCATCAAGCTACATTTTTCTGGTGATTACTTTGATTATAACAACTTGAATGTTGTGTTCTTTCAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGTTTGTTGCCTTCTTTCTTACTTTGTTTTTTAAATCAAAATCCTCATATTTGGTTCTTTTAAATTTCGTTTACTTTTCAGTTTGATTGTTTGTTCTGAATCTCTTCTGATGCTTTCTTTCAAGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTTGTGAAGATTCTTGTAATCGAGATTTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATTGTTGGAATAATTATGTCAGCTCAAGCCTCTTGGCCTGCCAAGAGAGGTTAATCATCCGCCTCTTGAATTTTGAACACAAGATGTTAAAGTTCAATTACGATGGGAAGGGTAACTTGTTTTTCTACTCTCGAGCTCTGTAGTTTGCCCCTTTGATAGATAATGATATTCTTGTAAAAGCTAGAGTGGGAAGTTTGTATGCATCTTTACTTCTCTGGGTTTCGATCCTCTTCCCTTGGAAAACCATTTCTTCATTCTGATGTTGGTTTTAAATAATTTCCTTTTTGCCTTCTTTTTGATGGGAAAACGTCTATATATTGTTCTGGTAATTTGAAAATACTGGAAATATTCAATAAGTTACAGGAGGAAGCCAATGTAGTAGGATTGCTTCCTTTTCCAGACGTATGTAACATATTTTGTTGCAAAATCTGCTTGCATGTACTTCTTGAATATTTGTTGAACCAATGATATTCTTGATATTTATTTTTCCTTTATTGGATAATACTCTCAAGATCATCTTTTTAGCTTTTTAGCTTTTGTCACTATCATATGTTCAATAACTAGGAAACTTAGGCTTGAATCTAAAACACGAGTATTGACAAACC

mRNA sequence

TCCAGGAATAAAACTTTCAACTTTCTCACGCGCGCGTGGACGTTTCTCGATACTCATCCGTCGATCTCCACAATTTTCAGATCAGGAACTCTATTCCTCCAGGGTTCACACCGGCGGATTTCAGATCAAATCCAATCCCTCTCCGATTATTACTGCGTCGATTTCAGAATTAAGGTCGGAGATTCATAGGTAATCATGTCCAGCGCCGTCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGCATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCAGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTTGTGAAGATTCTTGTAATCGAGATTTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATTGTTGGAATAATTATGTCAGCTCAAGCCTCTTGGCCTGCCAAGAGAGGTTAATCATCCGCCTCTTGAATTTTGAACACAAGATGTTAAAGTTCAATTACGATGGGAAGGGTAACTTGTTTTTCTACTCTCGAGCTCTGTAGTTTGCCCCTTTGATAGATAATGATATTCTTGTAAAAGCTAGAGTGGGAAGTTTGTATGCATCTTTACTTCTCTGGGTTTCGATCCTCTTCCCTTGGAAAACCATTTCTTCATTCTGATGTTGGTTTTAAATAATTTCCTTTTTGCCTTCTTTTTGATGGGAAAACGTCTATATATTGTTCTGGTAATTTGAAAATACTGGAAATATTCAATAAGTTACAGGAGGAAGCCAATGTAGTAGGATTGCTTCCTTTTCCAGACGTATGTAACATATTTTGTTGCAAAATCTGCTTGCATGTACTTCTTGAATATTTGTTGAACCAATGATATTCTTGATATTTATTTTTCCTTTATTGGATAATACTCTCAAGATCATCTTTTTAGCTTTTTAGCTTTTGTCACTATCATATGTTCAATAACTAGGAAACTTAGGCTTGAATCTAAAACACGAGTATTGACAAACC

Coding sequence (CDS)

ATGTCCAGCGCCGTCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGCATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCAGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTTGTGAAGATTCTTGTAATCGAGATTTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATTGTTGGAATAATTATGTCAGCTCAAGCCTCTTGGCCTGCCAAGAGAGGTTAA

Protein sequence

MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAKRG
Homology
BLAST of Lsi08G011610 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.3e-77
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS  V L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

BLAST of Lsi08G011610 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.3e-75
Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 0

Query: 6   VLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 65
           V   +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRITSK
Sbjct: 4   VAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSK 63

Query: 66  NLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVC 125
           NLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGFANLVC
Sbjct: 64  NLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVC 123

Query: 126 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           GLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 124 GLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

BLAST of Lsi08G011610 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-46
Identity = 94/165 (56.97%), Postives = 135/165 (81.82%), Query Frame = 0

Query: 12  SWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVI 71
           ++ + L+  SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+I
Sbjct: 46  NFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISII 105

Query: 72  FCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGI 131
           FCE VAIYG+I+AI+  +KL   +A  +Y+  +L  GY++F +GI VG +NL+CG+ VGI
Sbjct: 106 FCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGI 165

Query: 132 IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAS 177
            G++ A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +AS
Sbjct: 166 TGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

BLAST of Lsi08G011610 vs. ExPASy Swiss-Prot
Match: Q91V37 (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-44
Identity = 94/160 (58.75%), Postives = 127/160 (79.38%), Query Frame = 0

Query: 17  LINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSASQIYA--PESLRAGYAIFASGIIVGFANLVCGLCVGIIGS 136
           AIYG+I+AI++    E  SA++  A    +  AGY++F +G+ VG +NL CG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

BLAST of Lsi08G011610 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-44
Identity = 93/160 (58.13%), Postives = 126/160 (78.75%), Query Frame = 0

Query: 17  LINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSAS--QIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGS 136
           AIYG+I+AI++    E  SA+  +     +  AGY++F +G+ VG +NL CG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

BLAST of Lsi08G011610 vs. ExPASy TrEMBL
Match: A0A0A0LQ28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.2e-85
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AVVL RSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of Lsi08G011610 vs. ExPASy TrEMBL
Match: A0A5A7V9W8 (V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002840 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.5e-85
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of Lsi08G011610 vs. ExPASy TrEMBL
Match: A0A1S3BBZ9 (V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.5e-85
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of Lsi08G011610 vs. ExPASy TrEMBL
Match: A0A6J1K5F4 (V-type proton ATPase subunit c''1-like OS=Cucurbita maxima OX=3661 GN=LOC111491843 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSAV++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

BLAST of Lsi08G011610 vs. ExPASy TrEMBL
Match: A0A6J1HEY2 (V-type proton ATPase subunit c''1-like OS=Cucurbita moschata OX=3662 GN=LOC111462909 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSAV++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

BLAST of Lsi08G011610 vs. NCBI nr
Match: XP_038885623.1 (V-type proton ATPase subunit c''1 [Benincasa hispida])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of Lsi08G011610 vs. NCBI nr
Match: XP_004138742.1 (V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical protein Csa_021826 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 8.6e-85
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AVVL RSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of Lsi08G011610 vs. NCBI nr
Match: XP_008445147.1 (PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of Lsi08G011610 vs. NCBI nr
Match: XP_022962488.1 (V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-type proton ATPase subunit c''1-like [Cucurbita maxima] >KAG6598594.1 V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029527.1 V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.5 bits (820), Expect = 9.6e-84
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSAV++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

BLAST of Lsi08G011610 vs. NCBI nr
Match: XP_023547273.1 (V-type proton ATPase subunit c''1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 4.7e-83
Identity = 175/182 (96.15%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AV++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVS+SQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSSSQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

BLAST of Lsi08G011610 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 288.5 bits (737), Expect = 3.7e-78
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS  V L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

BLAST of Lsi08G011610 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 283.9 bits (725), Expect = 9.2e-77
Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 0

Query: 6   VLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 65
           V   +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRITSK
Sbjct: 4   VAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSK 63

Query: 66  NLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVC 125
           NLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGFANLVC
Sbjct: 64  NLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVC 123

Query: 126 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           GLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 124 GLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

BLAST of Lsi08G011610 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.1e-73
Identity = 159/210 (75.71%), Postives = 168/210 (80.00%), Query Frame = 0

Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS  V L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCG------------------------------LCVGIIGSSCALSDAQNSSLFVKI 180
           ANLVCG                              LCVGIIGSSCALSDAQNS+LFVKI
Sbjct: 121 ANLVCGSVSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKI 180

BLAST of Lsi08G011610 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0

Query: 25  FSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 15  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 75  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 134

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 135 KLFVGMILILIFAEALALYGLIVGIILSSRA 160

BLAST of Lsi08G011610 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0

Query: 25  FSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 74  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 133

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 KLFVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SZY75.3e-7788.33V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE... [more]
Q9SLA21.3e-7589.14V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE... [more]
P239683.7e-4656.97V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508... [more]
Q91V373.5e-4458.75V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6... [more]
Q2TA245.9e-4458.13V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B... [more]
Match NameE-valueIdentityDescription
A0A0A0LQ284.2e-8598.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1[more]
A0A5A7V9W85.5e-8598.35V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A1S3BBZ95.5e-8598.35V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 S... [more]
A0A6J1K5F44.6e-8497.25V-type proton ATPase subunit c''1-like OS=Cucurbita maxima OX=3661 GN=LOC1114918... [more]
A0A6J1HEY24.6e-8497.25V-type proton ATPase subunit c''1-like OS=Cucurbita moschata OX=3662 GN=LOC11146... [more]
Match NameE-valueIdentityDescription
XP_038885623.11.3e-85100.00V-type proton ATPase subunit c''1 [Benincasa hispida][more]
XP_004138742.18.6e-8598.90V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical pro... [more]
XP_008445147.11.1e-8498.35PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type... [more]
XP_022962488.19.6e-8497.25V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-ty... [more]
XP_023547273.14.7e-8396.15V-type proton ATPase subunit c''1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G32530.13.7e-7888.33ATPase, F0/V0 complex, subunit C protein [more]
AT2G25610.19.2e-7789.14ATPase, F0/V0 complex, subunit C protein [more]
AT4G32530.22.1e-7375.71ATPase, F0/V0 complex, subunit C protein [more]
AT1G75630.11.4e-1635.10vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 [more]
AT1G19910.11.4e-1635.10ATPase, F0/V0 complex, subunit C protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000245V-ATPase proteolipid subunitPRINTSPR00122VACATPASEcoord: 67..91
score: 34.11
coord: 123..149
score: 35.96
coord: 41..65
score: 23.26
coord: 150..173
score: 47.15
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 28..87
e-value: 1.1E-14
score: 54.5
coord: 112..171
e-value: 8.8E-10
score: 38.8
NoneNo IPR availableGENE3D1.20.120.610coord: 23..177
e-value: 3.6E-52
score: 178.0
NoneNo IPR availablePANTHERPTHR10263:SF56V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNITcoord: 4..179
NoneNo IPR availablePANTHERPTHR10263V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 4..179
NoneNo IPR availableCDDcd18177ATP-synt_Vo_c_ATP6F_rpt1coord: 25..87
e-value: 9.44178E-26
score: 91.9403
NoneNo IPR availableCDDcd18178ATP-synt_Vo_c_ATP6F_rpt2coord: 107..171
e-value: 8.57584E-25
score: 89.4883
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 104..172
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 21..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G011610.1Lsi08G011610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function GO:0015078 proton transmembrane transporter activity