Lsi08G011340 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGCCTCCCCACCCTTCTGACGACTCTCTCACCCTTTTTCCAGGCTCAAGTTGCAGATACTCTCTTCTCTTGCGTGAAAAGTCTCCGCCTCTCTTTTTTCAGGTCTCATCTCCATCTGGGTTTTCCATTTTTCTGAGAATTTTTGCTTTATTTTCAGGTGATTTGGATTGGATTTGTGTTGTTTTTGCTTTATCTGAACTTACTGTTCTTTGATTCTTTGTTCTTGTGTTTTTGCTTGGCGATTTGGGTGTGTTTGTTTCTTTGACTTCGTTGCCAAATTTCTTGTACTGATCGTCAGAAAACCATTTTTCTTTGAATTGTTGAGTTTGCGAACCAATTGTTTTGTTGGTGATTGGGTAATCGCATTGAACAAATCATTTTTGGACAGGGTTTTTGTTTTTTTGGCTTGTTTTTTCTCAGCCATTGACTATGATTTTGTTGCGATGACCTTTTCAACCTTGGTGGGTGGCCATGATTTTCTAAAGTCTCGACTTTCAGATTCTCTTAACTCTCTTTCTTGGTTTCTCTGTTAAGATCAAATATAAATGTCATTTTGATTTTATTCTTTTTAGAAGATGGGTATGTGATATAATCAGTGGTTTCTGCCTGGATTTTTGTCTGCTAAAGACTTGGACTGAATGGAACAAATGGAAATTTGGAATCTGATTGCTGGTTGGGTCTTTACTTTTATAACAGTGGCGTAGAGCATGAAGAGTTGAAAGGTAGATAAAAGATCTTGTTTATTGAGAAATCTAAGCAGAAAGTTGTATTACTATTAGTAAGAATTTATGTTCCGTATTATTTTGGATAAGGAGTTCTAGTGAATATAAAGGATCACGTTTTTTGGGAAATCAAAGTAGAAAGTCGTGTTGCTATTTGTAAGAATTTATGTTCCGTATTGATTTTGGAAAGTTTGGTTCCTTTGGAGTCTTCGTCCAGAGATTGTAGAATTAAAACTATTGGTTGCATTGTTCTTATCAGGAATCTCATTTAGTGATTGTTACCTAATTCAAGTTTTGTTGTTATGTCCAAATGTGCAGATAATTATGGTGGTTCAAGGATTAGCTTTCTAAATGTGTTCGGTGTATTATTTTGTCTTCGCACAGTATCATTTTGGGCCTGGTTGATCAATGATTAGATTCTGGTTCTTTGATTAATATTTTAGATTCGACTGAGGTGCTCGTAGTTCCTTCTTGTTCACTGAATTTTTCTATGAAAGTGAGCTAAACTTCCCATCTCTTTCATGGATAGTAATCAGTTTGGTTCTAACTGGGATGATGTGATTTGTTCGATATGCTTGGATTTTCCTCATAATGCTGTACTTCTTCAATGCTCATCATATGACAACGGATGCCGCCCCTTTGTGTGCGACACGGATCATTTACACTCGAATTGTCTTGATCGTTTCAAAAATGCACATAACACAACTCCCCCATCAATATCTGATGTAGTTCCTCCAATGAACACAGAACCAGTGGCACCAGAAGATGATTGCAAATTATGTTGTCCTTTGTGTAGAGGAGACGTTAGTGGATGGAAGGTGGTTGATGAGGCCCGCATACATTTGGATGTAAAGAAGCGTTATTGTGAGGAAGAACAATGTAGATTTATGGGCACGTATTTGGAACTACAACAACATGCTCAGTTGGAACATCCACATGCTCGTCCTTCGAAGATCGATCCAGCTCGACAACTTGATTGGGAAAATTTTCAGCAGTCCTCTGAAATCATCGATGTCTTAAGTACCATTCACTCAGAAGTTCCCCGTGGGGTGGTGTTTGGAGACTATGTGATTGAATATGGGGATGATGAAAGTGGAGATGAGTTTGAGGATTTCCCTGGGGATGATGGCAATTGGTGGACCTCTTGCATCTTGTATCAAGTATTTGATAATTTTAGGAACTCAAGAAATCGAAGGAGGTCAAGAATTGGTGATACAAGAAGGGGAAATCGCCGTTCAAGTAATGACTTGTCAAATTCAGACGATAGTTCTGTGGCCTCGGTAGAATTTGCGGATTACGGTGTAGAAGAAATTGACGACGAACTTGTGAGTACAAATGTCTCTTCGAGGGGTAGTTCCAACCACAGGAGGTGAGAAAAATGCATTCCCCTTCAAATCCCCATTGAGCTCTATTCAAGTATTTCTGTTTAACTAGTTATTTGTGGGGCTTTATGGAACTTCTTAACATGTTTTGGCTGAAATTGACCTTAAGAACTAAACAAAATGAACTGTTATAACATTTATGAATTAGATGAGACTTCCTTTTGTTGCATATAGTTCTTAGCTCTACAAGTTGAACAGTTTAGCTTAGATGTCACCATACCGATATATTTGAGTTTCTTGTTCTAACTTGATTAATTCATATTCCTCACCAATCCCTAGTTCCCGAAGACGTCGCTCCCGCTTTTACGACAACTAGCCACTAGGTATGCATTTCCCCATGATCTGCACTGTTTTTGTATTGTCTCTATTTTTTAATACTCAACAGGACGGACCTTTTTAAGCTTGGTCTATTTTCCCCTCCTTCCTTTCTCACAAATATTTTCCCCTGTTTTCTTATGATTTTATGGCAGCGTCGGAAAATGAGGCGGAGTTAAGGAAATAGACGAACCATTTAGACGTAGAAAAGTTCTCAAATTCATGTTACAATATGTTATGTTTAAACGTTTAGTTCTTACATTATGTTGGCTTCTTTCTTTCTTTCTTTTGTTTGGTTTCTTAATCTTTTATGGGGTTGTCCTAAGATGTATTCTGCTTACTCATTATATTGTCAAAATGGATTGAAAGGCGCCAAACTGATGATAACTGATGCTTTAGTTAGTGTACAGCTGATCTAAATTTTGTTCCCTTGTTTCATTTAGAACTTTCTTATTCTTGCAATCTCGCTTATGGTTGTCGACATGCTTGATTGGCGTTGAGTCCGTGCATATTGTGTACGATATTCTAAAACGTCATGCTCTTGCTTTCATATTGTTTTGTACTCCTTTGTTCTCGAATCCGGAATTGTTTTGCTTTCTTTCCCAACTTCAATCTATTATGATTGACTTATGTTTGGCTTTAAAGTTCACAATTATTTTCACTTTATATGGGAGTGGCCTGAGGTCAGTGTCATACGATATGCTTAGATGGGAATCAAGTTAA TGCCTCCCCACCCTTCTGACGACTCTCTCACCCTTTTTCCAGGCTCAAGTTGCAGATACTCTCTTCTCTTGCGTGAAAAGTCTCCGCCTCTCTTTTTTCAGGTCTCATCTCCATCTGGGTTTTCCATTTTTCTGAGAATTTTTGCTTTATTTTCAGATAATTATGGTGGTTCAAGGATTAGCTTTCTAAATGTGTTCGGTGTATTATTTTGTCTTCGCACAGTATCATTTTGGGCCTGGTTGATCAATGATTAGATTCTGGTTCTTTGATTAATATTTTAGATTCGACTGAGGTGCTCGTAGTTCCTTCTTGTTCACTGAATTTTTCTATGAAAGTGAGCTAAACTTCCCATCTCTTTCATGGATAGTAATCAGTTTGGTTCTAACTGGGATGATGTGATTTGTTCGATATGCTTGGATTTTCCTCATAATGCTGTACTTCTTCAATGCTCATCATATGACAACGGATGCCGCCCCTTTGTGTGCGACACGGATCATTTACACTCGAATTGTCTTGATCGTTTCAAAAATGCACATAACACAACTCCCCCATCAATATCTGATGTAGTTCCTCCAATGAACACAGAACCAGTGGCACCAGAAGATGATTGCAAATTATGTTGTCCTTTGTGTAGAGGAGACGTTAGTGGATGGAAGGTGGTTGATGAGGCCCGCATACATTTGGATGTAAAGAAGCGTTATTGTGAGGAAGAACAATGTAGATTTATGGGCACGTATTTGGAACTACAACAACATGCTCAGTTGGAACATCCACATGCTCGTCCTTCGAAGATCGATCCAGCTCGACAACTTGATTGGGAAAATTTTCAGCAGTCCTCTGAAATCATCGATGTCTTAAGTACCATTCACTCAGAAGTTCCCCGTGGGGTGGTGTTTGGAGACTATGTGATTGAATATGGGGATGATGAAAGTGGAGATGAGTTTGAGGATTTCCCTGGGGATGATGGCAATTGGTGGACCTCTTGCATCTTGTATCAAGTATTTGATAATTTTAGGAACTCAAGAAATCGAAGGAGGTCAAGAATTGGTGATACAAGAAGGGGAAATCGCCGTTCAAGTAATGACTTGTCAAATTCAGACGATAGTTCTGTGGCCTCGGTAGAATTTGCGGATTACGGTGTAGAAGAAATTGACGACGAACTTGTGAGTACAAATGTCTCTTCGAGGGGTAGTTCCAACCACAGGAGAACTTTCTTATTCTTGCAATCTCGCTTATGGTTGTCGACATGCTTGATTGGCGTTGAGTCCGTGCATATTGTGTACGATATTCTAAAACGTCATGCTCTTGCTTTCATATTGTTTTGTACTCCTTTGTTCTCGAATCCGGAATTGTTTTGCTTTCTTTCCCAACTTCAATCTATTATGATTGACTTATGTTTGGCTTTAAAGTTCACAATTATTTTCACTTTATATGGGAGTGGCCTGAGGTCAGTGTCATACGATATGCTTAGATGGGAATCAAGTTAA ATGGATAGTAATCAGTTTGGTTCTAACTGGGATGATGTGATTTGTTCGATATGCTTGGATTTTCCTCATAATGCTGTACTTCTTCAATGCTCATCATATGACAACGGATGCCGCCCCTTTGTGTGCGACACGGATCATTTACACTCGAATTGTCTTGATCGTTTCAAAAATGCACATAACACAACTCCCCCATCAATATCTGATGTAGTTCCTCCAATGAACACAGAACCAGTGGCACCAGAAGATGATTGCAAATTATGTTGTCCTTTGTGTAGAGGAGACGTTAGTGGATGGAAGGTGGTTGATGAGGCCCGCATACATTTGGATGTAAAGAAGCGTTATTGTGAGGAAGAACAATGTAGATTTATGGGCACGTATTTGGAACTACAACAACATGCTCAGTTGGAACATCCACATGCTCGTCCTTCGAAGATCGATCCAGCTCGACAACTTGATTGGGAAAATTTTCAGCAGTCCTCTGAAATCATCGATGTCTTAAGTACCATTCACTCAGAAGTTCCCCGTGGGGTGGTGTTTGGAGACTATGTGATTGAATATGGGGATGATGAAAGTGGAGATGAGTTTGAGGATTTCCCTGGGGATGATGGCAATTGGTGGACCTCTTGCATCTTGTATCAAGTATTTGATAATTTTAGGAACTCAAGAAATCGAAGGAGGTCAAGAATTGGTGATACAAGAAGGGGAAATCGCCGTTCAAGTAATGACTTGTCAAATTCAGACGATAGTTCTGTGGCCTCGGTAGAATTTGCGGATTACGGTGTAGAAGAAATTGACGACGAACTTGTGAGTACAAATGTCTCTTCGAGGGGTAGTTCCAACCACAGGAGAACTTTCTTATTCTTGCAATCTCGCTTATGGTTGTCGACATGCTTGATTGGCGTTGAGTCCGTGCATATTGTGTACGATATTCTAAAACGTCATGCTCTTGCTTTCATATTGTTTTGTACTCCTTTGTTCTCGAATCCGGAATTGTTTTGCTTTCTTTCCCAACTTCAATCTATTATGATTGACTTATGTTTGGCTTTAAAGTTCACAATTATTTTCACTTTATATGGGAGTGGCCTGAGGTCAGTGTCATACGATATGCTTAGATGGGAATCAAGTTAA MDSNQFGSNWDDVICSICLDFPHNAVLLQCSSYDNGCRPFVCDTDHLHSNCLDRFKNAHNTTPPSISDVVPPMNTEPVAPEDDCKLCCPLCRGDVSGWKVVDEARIHLDVKKRYCEEEQCRFMGTYLELQQHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVFGDYVIEYGDDESGDEFEDFPGDDGNWWTSCILYQVFDNFRNSRNRRRSRIGDTRRGNRRSSNDLSNSDDSSVASVEFADYGVEEIDDELVSTNVSSRGSSNHRRTFLFLQSRLWLSTCLIGVESVHIVYDILKRHALAFILFCTPLFSNPELFCFLSQLQSIMIDLCLALKFTIIFTLYGSGLRSVSYDMLRWESS Homology
BLAST of Lsi08G011340 vs. ExPASy TrEMBL
Match: A0A5A7V9I6 (DUF1644 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003150 PE=4 SV=1) HSP 1 Score: 577.0 bits (1486), Expect = 5.6e-161 Identity = 274/283 (96.82%), Postives = 277/283 (97.88%), Query Frame = 0
BLAST of Lsi08G011340 vs. ExPASy TrEMBL
Match: A0A1S3BCQ9 (uncharacterized protein LOC103488235 OS=Cucumis melo OX=3656 GN=LOC103488235 PE=4 SV=1) HSP 1 Score: 575.1 bits (1481), Expect = 2.1e-160 Identity = 273/282 (96.81%), Postives = 276/282 (97.87%), Query Frame = 0
BLAST of Lsi08G011340 vs. ExPASy TrEMBL
Match: A0A0A0LLR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G378570 PE=4 SV=1) HSP 1 Score: 568.9 bits (1465), Expect = 1.5e-158 Identity = 269/282 (95.39%), Postives = 273/282 (96.81%), Query Frame = 0
BLAST of Lsi08G011340 vs. ExPASy TrEMBL
Match: A0A6J1HBD7 (uncharacterized protein LOC111462462 OS=Cucurbita moschata OX=3662 GN=LOC111462462 PE=4 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 8.7e-154 Identity = 260/282 (92.20%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of Lsi08G011340 vs. ExPASy TrEMBL
Match: A0A6J1KDY0 (uncharacterized protein LOC111492365 OS=Cucurbita maxima OX=3661 GN=LOC111492365 PE=4 SV=1) HSP 1 Score: 547.4 bits (1409), Expect = 4.8e-152 Identity = 257/282 (91.13%), Postives = 271/282 (96.10%), Query Frame = 0
BLAST of Lsi08G011340 vs. NCBI nr
Match: KAA0064992.1 (DUF1644 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 577.0 bits (1486), Expect = 1.2e-160 Identity = 274/283 (96.82%), Postives = 277/283 (97.88%), Query Frame = 0
BLAST of Lsi08G011340 vs. NCBI nr
Match: XP_008445091.1 (PREDICTED: uncharacterized protein LOC103488235 [Cucumis melo] >XP_008445092.1 PREDICTED: uncharacterized protein LOC103488235 [Cucumis melo]) HSP 1 Score: 575.1 bits (1481), Expect = 4.4e-160 Identity = 273/282 (96.81%), Postives = 276/282 (97.87%), Query Frame = 0
BLAST of Lsi08G011340 vs. NCBI nr
Match: XP_038886419.1 (uncharacterized protein LOC120076613 [Benincasa hispida] >XP_038886420.1 uncharacterized protein LOC120076613 [Benincasa hispida] >XP_038886421.1 uncharacterized protein LOC120076613 [Benincasa hispida]) HSP 1 Score: 575.1 bits (1481), Expect = 4.4e-160 Identity = 273/282 (96.81%), Postives = 277/282 (98.23%), Query Frame = 0
BLAST of Lsi08G011340 vs. NCBI nr
Match: XP_011649763.1 (uncharacterized protein LOC101205331 [Cucumis sativus] >XP_011649764.1 uncharacterized protein LOC101205331 [Cucumis sativus] >XP_031736678.1 uncharacterized protein LOC101205331 [Cucumis sativus] >KGN62875.1 hypothetical protein Csa_022169 [Cucumis sativus]) HSP 1 Score: 568.9 bits (1465), Expect = 3.2e-158 Identity = 269/282 (95.39%), Postives = 273/282 (96.81%), Query Frame = 0
BLAST of Lsi08G011340 vs. NCBI nr
Match: XP_022961811.1 (uncharacterized protein LOC111462462 [Cucurbita moschata] >XP_022961812.1 uncharacterized protein LOC111462462 [Cucurbita moschata]) HSP 1 Score: 553.1 bits (1424), Expect = 1.8e-153 Identity = 260/282 (92.20%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of Lsi08G011340 vs. TAIR 10
Match: AT4G31410.1 (Protein of unknown function (DUF1644) ) HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-113 Identity = 197/280 (70.36%), Postives = 231/280 (82.50%), Query Frame = 0
BLAST of Lsi08G011340 vs. TAIR 10
Match: AT4G31410.2 (Protein of unknown function (DUF1644) ) HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-113 Identity = 197/280 (70.36%), Postives = 231/280 (82.50%), Query Frame = 0
BLAST of Lsi08G011340 vs. TAIR 10
Match: AT3G24740.1 (Protein of unknown function (DUF1644) ) HSP 1 Score: 187.2 bits (474), Expect = 2.4e-47 Identity = 109/283 (38.52%), Postives = 141/283 (49.82%), Query Frame = 0
BLAST of Lsi08G011340 vs. TAIR 10
Match: AT3G24740.2 (Protein of unknown function (DUF1644) ) HSP 1 Score: 187.2 bits (474), Expect = 2.4e-47 Identity = 109/283 (38.52%), Postives = 141/283 (49.82%), Query Frame = 0
BLAST of Lsi08G011340 vs. TAIR 10
Match: AT1G68140.2 (Protein of unknown function (DUF1644) ) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-43 Identity = 82/195 (42.05%), Postives = 125/195 (64.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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