Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAACTAAAGCAAAAGAAAGCTGTGGTTTGGGGAAGGAAAGGAAGATCACAGCTCCAAGTTCTGTCACAATTCCTAATAATACTCCAACCAAAAGAACTCCAAAATCATCTCCTAGAGGCATTATTTCTTCCACTGATCCAAAACTTTCTTCTTTTTCTTCTTCTTCTTCTTCTCCTTCTTCCTCTTCTTCCTCTGCTCCTTCCCTTTCCATTCTCCCCGAAAAACACGTCCCGAATTATCTCAAATCGACAGCCAGCTCCCGCCATGACCATAACTTCAGGCCAATAACCAAGAGTAAGTCTGGCCCTGCACCAATACCTGAGGGCAAACCTAGTTTGAATAGAAGAAGATCTTTCGATAAACCTCCCCCGACCGCACCCCGTTTGGAGAAGCCGTTTCGATCGCCTGGACCAAGGAATCGGGCTGGTCATGTTCCGGTCCGGTCGTCCTCTTTTGGGGCTAAACCCTCCACCACCACCACCACCACCAACACAATTGTCAATTCTACAAAGCCTGGTTTATTGGAGAGATCATCTTCTAAAGTCTCTAAAGTTGGAGGGAAACCACAACAACCAATTCAGGCTTTGAAAAGTAGCACTAGTAATGTAAAGAAAAGCTTGAAAAGAGAACCTAGCAATGCTGCTTCTGCTTCTGCTTCTGCTTCTGTTTCAGCTTCTGCTTCAGCAGAAATGATTCCCAAGACTAAGAATGCTATTGAACATGTAGATCAAAGTCCTTCTTTCGTTCTCGGTGTTAACGAAGAAGATTTAAAAAAGATCGAGTGCGAACTCGATCCGTATCTTCCTGATCCAATGCCTGAATTGGACAAACAACTCAGAATTGATCAGGTGGAAAAGAATGAGACTGATGACACAGAGAACTTCAAAGTAGTTGTTACTAATAAAGAGGTGGAGGAAGAAACTCCAGAGGCAGCTCAGACTGAAATGTCGTTAATGAATCGAGAACAAAACGAAGCGGAAGGAGACGAGGAGAAAACAGAGAGAATTACAGTGGAAAAAGAGGAAGTTATTGCATCAGAGGAAAACACAAACAACAAGAATGATCAAGAGAAGAGTGAAACAGATCCTATTTTAGATGGGGAGAGTTACAAGGAAGAAAATGATCACAAGGCGACCGAGACAACGGAGAAAGAAGGCGAAGCGACCGACAAAGTGGCGGCGGCAGTGGCAGCAGCAAAACCGCAACAAGGAGGACCGGCGAGAAAAGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAAAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGATTATGAATCTTCATCTAAATGA
mRNA sequence
ATGGCAACAACTAAAGCAAAAGAAAGCTGTGGTTTGGGGAAGGAAAGGAAGATCACAGCTCCAAGTTCTGTCACAATTCCTAATAATACTCCAACCAAAAGAACTCCAAAATCATCTCCTAGAGGCATTATTTCTTCCACTGATCCAAAACTTTCTTCTTTTTCTTCTTCTTCTTCTTCTCCTTCTTCCTCTTCTTCCTCTGCTCCTTCCCTTTCCATTCTCCCCGAAAAACACGTCCCGAATTATCTCAAATCGACAGCCAGCTCCCGCCATGACCATAACTTCAGGCCAATAACCAAGAGTAAGTCTGGCCCTGCACCAATACCTGAGGGCAAACCTAGTTTGAATAGAAGAAGATCTTTCGATAAACCTCCCCCGACCGCACCCCGTTTGGAGAAGCCGTTTCGATCGCCTGGACCAAGGAATCGGGCTGGTCATGTTCCGGTCCGGTCGTCCTCTTTTGGGGCTAAACCCTCCACCACCACCACCACCACCAACACAATTGTCAATTCTACAAAGCCTGGTTTATTGGAGAGATCATCTTCTAAAGTCTCTAAAGTTGGAGGGAAACCACAACAACCAATTCAGGCTTTGAAAAGTAGCACTAGTAATGTAAAGAAAAGCTTGAAAAGAGAACCTAGCAATGCTGCTTCTGCTTCTGCTTCTGCTTCTGTTTCAGCTTCTGCTTCAGCAGAAATGATTCCCAAGACTAAGAATGCTATTGAACATGTAGATCAAAGTCCTTCTTTCGTTCTCGGTGTTAACGAAGAAGATTTAAAAAAGATCGAGTGCGAACTCGATCCGTATCTTCCTGATCCAATGCCTGAATTGGACAAACAACTCAGAATTGATCAGGTGGAAAAGAATGAGACTGATGACACAGAGAACTTCAAAGTAGTTGTTACTAATAAAGAGGTGGAGGAAGAAACTCCAGAGGCAGCTCAGACTGAAATGTCGTTAATGAATCGAGAACAAAACGAAGCGGAAGGAGACGAGGAGAAAACAGAGAGAATTACAGTGGAAAAAGAGGAAGTTATTGCATCAGAGGAAAACACAAACAACAAGAATGATCAAGAGAAGAGTGAAACAGATCCTATTTTAGATGGGGAGAGTTACAAGGAAGAAAATGATCACAAGGCGACCGAGACAACGGAGAAAGAAGGCGAAGCGACCGACAAAGTGGCGGCGGCAGTGGCAGCAGCAAAACCGCAACAAGGAGGACCGGCGAGAAAAGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAAAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGATTATGAATCTTCATCTAAATGA
Coding sequence (CDS)
ATGGCAACAACTAAAGCAAAAGAAAGCTGTGGTTTGGGGAAGGAAAGGAAGATCACAGCTCCAAGTTCTGTCACAATTCCTAATAATACTCCAACCAAAAGAACTCCAAAATCATCTCCTAGAGGCATTATTTCTTCCACTGATCCAAAACTTTCTTCTTTTTCTTCTTCTTCTTCTTCTCCTTCTTCCTCTTCTTCCTCTGCTCCTTCCCTTTCCATTCTCCCCGAAAAACACGTCCCGAATTATCTCAAATCGACAGCCAGCTCCCGCCATGACCATAACTTCAGGCCAATAACCAAGAGTAAGTCTGGCCCTGCACCAATACCTGAGGGCAAACCTAGTTTGAATAGAAGAAGATCTTTCGATAAACCTCCCCCGACCGCACCCCGTTTGGAGAAGCCGTTTCGATCGCCTGGACCAAGGAATCGGGCTGGTCATGTTCCGGTCCGGTCGTCCTCTTTTGGGGCTAAACCCTCCACCACCACCACCACCACCAACACAATTGTCAATTCTACAAAGCCTGGTTTATTGGAGAGATCATCTTCTAAAGTCTCTAAAGTTGGAGGGAAACCACAACAACCAATTCAGGCTTTGAAAAGTAGCACTAGTAATGTAAAGAAAAGCTTGAAAAGAGAACCTAGCAATGCTGCTTCTGCTTCTGCTTCTGCTTCTGTTTCAGCTTCTGCTTCAGCAGAAATGATTCCCAAGACTAAGAATGCTATTGAACATGTAGATCAAAGTCCTTCTTTCGTTCTCGGTGTTAACGAAGAAGATTTAAAAAAGATCGAGTGCGAACTCGATCCGTATCTTCCTGATCCAATGCCTGAATTGGACAAACAACTCAGAATTGATCAGGTGGAAAAGAATGAGACTGATGACACAGAGAACTTCAAAGTAGTTGTTACTAATAAAGAGGTGGAGGAAGAAACTCCAGAGGCAGCTCAGACTGAAATGTCGTTAATGAATCGAGAACAAAACGAAGCGGAAGGAGACGAGGAGAAAACAGAGAGAATTACAGTGGAAAAAGAGGAAGTTATTGCATCAGAGGAAAACACAAACAACAAGAATGATCAAGAGAAGAGTGAAACAGATCCTATTTTAGATGGGGAGAGTTACAAGGAAGAAAATGATCACAAGGCGACCGAGACAACGGAGAAAGAAGGCGAAGCGACCGACAAAGTGGCGGCGGCAGTGGCAGCAGCAAAACCGCAACAAGGAGGACCGGCGAGAAAAGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAAAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGATTATGAATCTTCATCTAAATGA
Protein sequence
MATTKAKESCGLGKERKITAPSSVTIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSSPSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEKNETDDTENFKVVVTNKEVEEETPEAAQTEMSLMNREQNEAEGDEEKTERITVEKEEVIASEENTNNKNDQEKSETDPILDGESYKEENDHKATETTEKEGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Homology
BLAST of Lsi08G011270 vs. ExPASy TrEMBL
Match:
A0A0A0LS85 (CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G378000 PE=4 SV=1)
HSP 1 Score: 618.2 bits (1593), Expect = 2.7e-173
Identity = 370/472 (78.39%), Postives = 402/472 (85.17%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSS 60
MATT++KESCGLGKERKIT PSSVTIP+NT TKRTPKSSPRGIISSTDPK SF S SS+
Sbjct: 1 MATTRSKESCGLGKERKITPPSSVTIPSNTSTKRTPKSSPRGIISSTDPKFPSF-SPSSA 60
Query: 61 PSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRS 120
PSS SS+ SLSILPEKHVPNYLKSTASSR+DHNF+PI +SKSGPAPIPEG+PSLNRRRS
Sbjct: 61 PSSPSSAPSSLSILPEKHVPNYLKSTASSRNDHNFKPIARSKSGPAPIPEGRPSLNRRRS 120
Query: 121 FDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERS 180
FDKPPPT PRL KPFRSPGPRNR HVPVRSSSFGAKPSTTTT TI +STKPG LERS
Sbjct: 121 FDKPPPTVPRLGKPFRSPGPRNRTPHVPVRSSSFGAKPSTTTT---TIGHSTKPGFLERS 180
Query: 181 SSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNA---ASASASASVSASASAEMIPKT 240
SSK SKVGGKPQ PIQ+LK+S+S VKKSL+RE SNA ASASASAS SASASAE++PK+
Sbjct: 181 SSKSSKVGGKPQPPIQSLKTSSSYVKKSLRRESSNAAASASASASASASASASAEIVPKS 240
Query: 241 KNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEK-----NETD 300
KNA+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQ+R+DQVEK +
Sbjct: 241 KNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQIRLDQVEKKAVLDKDET 300
Query: 301 DTENFKVVVTNKEVEE--ETPEAAQTEMSLMNREQNEAEGDEEKTE----RITVEKEEVI 360
DTE KVVVTNKEVEE ETP +TE+SL N+EQNE EG+E K E RI VEKEEV+
Sbjct: 301 DTEILKVVVTNKEVEEQKETPRTVETEISLANQEQNEREGEEPKEEDNPKRIEVEKEEVV 360
Query: 361 ASEENTNNKNDQEKSETDPILDGESYKEENDH----KATETTEKEGEATDKVAAAVAAAK 420
A EE+ NNKNDQEKSETD +LDGES KEE+D KA ETTEKE E+T+K AK
Sbjct: 361 ALEESINNKNDQEKSETDSVLDGESCKEESDQNSTPKAAETTEKEAESTEK------TAK 420
Query: 421 PQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 455
P+QGGP RKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 PRQGGPGRKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 462
BLAST of Lsi08G011270 vs. ExPASy TrEMBL
Match:
A0A5A7VBK4 (Serine/arginine repetitive matrix protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003220 PE=4 SV=1)
HSP 1 Score: 615.1 bits (1585), Expect = 2.3e-172
Identity = 369/468 (78.85%), Postives = 401/468 (85.68%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSS 60
MATT++KES GLGKER+IT PSSVTIPNNTPTKRTPKSSPRG ISSTDPK+ SFSSSS S
Sbjct: 1 MATTRSKESGGLGKERRITPPSSVTIPNNTPTKRTPKSSPRGFISSTDPKVPSFSSSSPS 60
Query: 61 PSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRS 120
PSS+ + SLSILPEK VPNYLKSTASSR+DHNF+PIT+SKSGPAPIPEGKPSLNRRRS
Sbjct: 61 PSSAPT---SLSILPEKPVPNYLKSTASSRNDHNFKPITRSKSGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERS 180
FDKPPPTAPRLEKPFRSPGPRNRA HVPVRSSSFGAKPST+TT I +STKPG LERS
Sbjct: 121 FDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFGAKPSTSTT---IIGHSTKPGFLERS 180
Query: 181 SSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKNA 240
SSK+SKVGGKPQ PIQ+LK+S+S+VKKSL+RE SN A ASAS SASASAE++PKTKNA
Sbjct: 181 SSKISKVGGKPQPPIQSLKTSSSHVKKSLRRESSNVA---ASASASASASAEIVPKTKNA 240
Query: 241 IEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEK-----NETDDTE 300
+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQ+RIDQVEK + DTE
Sbjct: 241 VEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQVRIDQVEKKAALDKDETDTE 300
Query: 301 NFKVVVTNKEVEE-ETPEAAQTEMSLMNREQNEAEGDEEKTE----RITVEKEEVIASEE 360
KVVVTNKEVEE ETP A+TE+SL NREQNE E +E K E RI VEKEEV+A EE
Sbjct: 301 ILKVVVTNKEVEEKETPGTAETEISLANREQNEGEEEEPKEEDKPKRIGVEKEEVLALEE 360
Query: 361 NTNNKNDQEKSETDPILDGESYKEENDH----KATETTEKEGEATDKVAAAVAAAKPQQG 420
+ NNKNDQEKSETD +LDGES KEEND KA ETTEKE E+T+K AKP+QG
Sbjct: 361 SINNKNDQEKSETDSVLDGESCKEENDQNSTPKAAETTEKEAESTEK------TAKPRQG 420
Query: 421 GPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 455
P RKESPA+YNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 APGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 453
BLAST of Lsi08G011270 vs. ExPASy TrEMBL
Match:
A0A1S3BBU4 (serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103488229 PE=4 SV=1)
HSP 1 Score: 612.1 bits (1577), Expect = 1.9e-171
Identity = 367/468 (78.42%), Postives = 399/468 (85.26%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSS 60
MATT++KES GLGKER+IT PSSVTIPNNTPTKRTPKSSPRG ISSTDPK+ SFSSSS S
Sbjct: 1 MATTRSKESGGLGKERRITPPSSVTIPNNTPTKRTPKSSPRGFISSTDPKVPSFSSSSPS 60
Query: 61 PSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRS 120
PSS+ + SLSILPEK VPNYLKSTASSR+DHNF+PIT+SKSGPAPIPEGKPSLNRRRS
Sbjct: 61 PSSAPT---SLSILPEKPVPNYLKSTASSRNDHNFKPITRSKSGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERS 180
FDKPPPTAPRLEKPFRSPGPRNRA HVPVRSSSFGAKPST+TT I +STKPG LERS
Sbjct: 121 FDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFGAKPSTSTT---IIGHSTKPGFLERS 180
Query: 181 SSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKNA 240
SSK+SKVGGKPQ PIQ+LK+S+S+VKKSL+RE SN A AS SASASAE++PKTKNA
Sbjct: 181 SSKISKVGGKPQPPIQSLKTSSSHVKKSLRRESSNVA-----ASASASASAEIVPKTKNA 240
Query: 241 IEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEK-----NETDDTE 300
+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQ+RIDQVEK + DTE
Sbjct: 241 VEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQVRIDQVEKKAALDKDETDTE 300
Query: 301 NFKVVVTNKEVEE-ETPEAAQTEMSLMNREQNEAEGDEEKTE----RITVEKEEVIASEE 360
KVVVTNKEVEE ETP A+TE+SL NREQNE E +E K E RI VEKEEV+A EE
Sbjct: 301 ILKVVVTNKEVEEKETPGTAETEISLANREQNEGEEEEPKEEDKPKRIGVEKEEVLALEE 360
Query: 361 NTNNKNDQEKSETDPILDGESYKEENDH----KATETTEKEGEATDKVAAAVAAAKPQQG 420
+ NNKNDQEKSETD +LDGES KEEND KA ETTEKE E+T+K AKP+QG
Sbjct: 361 SINNKNDQEKSETDSVLDGESCKEENDQNSTPKAAETTEKEAESTEK------TAKPRQG 420
Query: 421 GPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 455
P RKESPA+YNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 APGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 451
BLAST of Lsi08G011270 vs. ExPASy TrEMBL
Match:
A0A6J1K599 (microtubule-associated protein RP/EB family member 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492415 PE=4 SV=1)
HSP 1 Score: 519.2 bits (1336), Expect = 1.7e-143
Identity = 343/491 (69.86%), Postives = 375/491 (76.37%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPN-NTPTKRTPKSSPRGIISSTDPKLSSFSSSSS 60
MAT++AKESCGLGKERKIT PSSVTIPN NT TKRTPKSSPRGI STD KLSSF S
Sbjct: 1 MATSRAKESCGLGKERKITTPSSVTIPNPNTSTKRTPKSSPRGI--STDQKLSSF---PS 60
Query: 61 SPSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRR 120
SPS SSSS SLSILP+KHVPNYLKSTASSRHDHNF+PI KS +GPAPIPEGKPSLNRRR
Sbjct: 61 SPSPSSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS-AGPAPIPEGKPSLNRRR 120
Query: 121 SFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLER 180
SFDKPPP RL KPFRSP PRNRA H PVRSSSFGAKPST T+V+STK G LER
Sbjct: 121 SFDKPPPAMQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST------TLVSSTKTGFLER 180
Query: 181 SSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKN 240
S SK+ KVGGK QQ +Q KSS SN++KSLKRE SNAASAS SAEM+PKTKN
Sbjct: 181 SGSKIYKVGGKTQQSVQTFKSS-SNLRKSLKRESSNAASAS---------SAEMVPKTKN 240
Query: 241 AIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQL-RIDQVEK-----NETDD 300
A+EHV QSP VLGVNEEDLKKIECELD LPDP PELDK+L DQVEK D
Sbjct: 241 AVEHVGQSPVLVLGVNEEDLKKIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQD 300
Query: 301 TENFKVVVTNKEVEEETPEAAQTEMSLM------NREQNEAEG-----DEEKTERITVEK 360
T+ FKVV +NK+V EETP AA+T+ + N+EQNE EG +EEK ERI VEK
Sbjct: 301 TKIFKVVGSNKKV-EETPGAAETDNAKSSIWEDENQEQNEGEGEEEAKEEEKPERIEVEK 360
Query: 361 EE---VIASEENTNNKNDQEKSETDPIL------------DGESYKEENDHKATETTEKE 420
EE V+ASEE+TNNKN++EKS TDPI DG+S KEEN + +TEKE
Sbjct: 361 EEVYGVVASEESTNNKNEEEKSHTDPIQEGVIVLEHKEAEDGQSSKEENHN----STEKE 420
Query: 421 GEATDKVAAAVA----AAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAF 455
EAT+KVAAA A AAKP+QGGP RKESPA+YNHVIEETASKLLEKRKNKVRALAGAF
Sbjct: 421 AEATEKVAAAAAAAAEAAKPRQGGPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAF 464
BLAST of Lsi08G011270 vs. ExPASy TrEMBL
Match:
A0A6J1HE16 (neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111462632 PE=4 SV=1)
HSP 1 Score: 512.7 bits (1319), Expect = 1.6e-141
Identity = 344/493 (69.78%), Postives = 373/493 (75.66%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPN-NTPTKRTPKSSPRGIISSTDPKLSSFSSSSS 60
MAT++AKESCGLGKERKITAPSSVTIPN NT TKRTPKSSPRGI STD KLSSF SS S
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGI--STDQKLSSFPSSPS 60
Query: 61 SPSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRR 120
SSSSSS SLSILP+KHVPNYLKSTASSRHDHNF+PI KS GPAPIPEGKPSLNRRR
Sbjct: 61 --SSSSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS-GGPAPIPEGKPSLNRRR 120
Query: 121 SFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLER 180
SFDKPPP RL KPFRSP PRNRA H PVRSSSFGAKPST +IV+STK G LER
Sbjct: 121 SFDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST------SIVSSTKTGFLER 180
Query: 181 SSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKN 240
S SK+ KVGGK QQ +Q LKSS SNV+KSLKRE SNAASAS SAEM+PKTKN
Sbjct: 181 SGSKIYKVGGKTQQSVQTLKSS-SNVRKSLKRESSNAASAS---------SAEMVPKTKN 240
Query: 241 AIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQL-RIDQVEK-----NETDD 300
A+EHV QSP VLG NEEDLKKIECELD LPDP PELDK+L DQVEK +
Sbjct: 241 AVEHVGQSPVLVLGANEEDLKKIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQE 300
Query: 301 TENFKVVVTNKEVEEETPEAAQTEMSLM------NREQNEAEG-----DEEKTERITVEK 360
T+ FKVV +NK+V EETP AA+T+ + NREQNE EG +EEK ERI VEK
Sbjct: 301 TKIFKVVGSNKKV-EETPGAAETDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEK 360
Query: 361 EE---VIASEENTNNKNDQEKSETDPIL------------DGESYKEENDHKATETTEKE 420
EE V+ASEE+TNNKN++EKS T PI DG+S KEEN +TEKE
Sbjct: 361 EEVFGVVASEESTNNKNEEEKSHTVPIQEGVIVLEHKEAEDGQSSKEENH----TSTEKE 420
Query: 421 GEATDKVAAA------VAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAG 455
EAT+KVAAA AAKP+QGGP RKESPA+YNHVIEETASKLLEKRKNKVRALAG
Sbjct: 421 TEATEKVAAAATSAAEAVAAKPRQGGPGRKESPAVYNHVIEETASKLLEKRKNKVRALAG 467
BLAST of Lsi08G011270 vs. NCBI nr
Match:
XP_038886465.1 (uncharacterized protein CG45076 [Benincasa hispida])
HSP 1 Score: 663.7 bits (1711), Expect = 1.1e-186
Identity = 387/463 (83.59%), Postives = 412/463 (88.98%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSS 60
MATTKAKE+ GLGKER+ITAPSSVTIP +TPTKRTPKSSPRG+ISSTDPKLS SSS S
Sbjct: 1 MATTKAKENSGLGKERRITAPSSVTIPTHTPTKRTPKSSPRGLISSTDPKLS--SSSPSP 60
Query: 61 PSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRS 120
SSSSSS SLS+LPEKH+PNYLKSTASSRHDHNF+P+T+SKSGPAPIPEGKPSLNRRRS
Sbjct: 61 SSSSSSSTLSLSVLPEKHIPNYLKSTASSRHDHNFKPVTRSKSGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERS 180
FDKPP TAPRL KPFRSPGPRNRA HVPVRSSSFGAKPSTT TIVNSTKPG L+RS
Sbjct: 121 FDKPPSTAPRLGKPFRSPGPRNRAAHVPVRSSSFGAKPSTT-----TIVNSTKPGFLDRS 180
Query: 181 SSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNA---ASASASASVSASASAEMIPKT 240
SSK+SKVGGKPQQPI +LKSS SNVKKSLKRE SNA AS SASAS SASASAE++PKT
Sbjct: 181 SSKISKVGGKPQQPIHSLKSSNSNVKKSLKRESSNAAASASVSASASASASASAEIVPKT 240
Query: 241 KNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEK-----NETD 300
KNA+EHVD SPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEK +
Sbjct: 241 KNAVEHVDHSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEKKAVLDKDEA 300
Query: 301 DTENFKVVVTNKEVEEETPEAAQTEMSLMNREQNEAEGDEEKTERITVEKEEVIASEE-N 360
DTE FKVVV NKEV EE PEAA+TE+SL NRE++E EG+EEK ERI VEKEEV+ SEE N
Sbjct: 301 DTETFKVVVANKEV-EEIPEAAETEISLTNRERDEVEGEEEKPERIAVEKEEVVGSEEIN 360
Query: 361 TNNKNDQEKSETDPILDGESYKEENDHKATETTEKEGEATDKVAAAVAAAKPQQGGPARK 420
TNNKNDQEKSETDP+LDGESYKEENDHKA ETTEKE EAT+K AAAV AKP+QGGP RK
Sbjct: 361 TNNKNDQEKSETDPVLDGESYKEENDHKAAETTEKEAEATEKAAAAV-VAKPRQGGPGRK 420
Query: 421 ESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 455
ESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 ESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 454
BLAST of Lsi08G011270 vs. NCBI nr
Match:
XP_011649760.1 (neurofilament heavy polypeptide [Cucumis sativus] >KGN62866.1 hypothetical protein Csa_021828 [Cucumis sativus])
HSP 1 Score: 618.2 bits (1593), Expect = 5.5e-173
Identity = 370/472 (78.39%), Postives = 402/472 (85.17%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSS 60
MATT++KESCGLGKERKIT PSSVTIP+NT TKRTPKSSPRGIISSTDPK SF S SS+
Sbjct: 1 MATTRSKESCGLGKERKITPPSSVTIPSNTSTKRTPKSSPRGIISSTDPKFPSF-SPSSA 60
Query: 61 PSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRS 120
PSS SS+ SLSILPEKHVPNYLKSTASSR+DHNF+PI +SKSGPAPIPEG+PSLNRRRS
Sbjct: 61 PSSPSSAPSSLSILPEKHVPNYLKSTASSRNDHNFKPIARSKSGPAPIPEGRPSLNRRRS 120
Query: 121 FDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERS 180
FDKPPPT PRL KPFRSPGPRNR HVPVRSSSFGAKPSTTTT TI +STKPG LERS
Sbjct: 121 FDKPPPTVPRLGKPFRSPGPRNRTPHVPVRSSSFGAKPSTTTT---TIGHSTKPGFLERS 180
Query: 181 SSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNA---ASASASASVSASASAEMIPKT 240
SSK SKVGGKPQ PIQ+LK+S+S VKKSL+RE SNA ASASASAS SASASAE++PK+
Sbjct: 181 SSKSSKVGGKPQPPIQSLKTSSSYVKKSLRRESSNAAASASASASASASASASAEIVPKS 240
Query: 241 KNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEK-----NETD 300
KNA+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQ+R+DQVEK +
Sbjct: 241 KNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQIRLDQVEKKAVLDKDET 300
Query: 301 DTENFKVVVTNKEVEE--ETPEAAQTEMSLMNREQNEAEGDEEKTE----RITVEKEEVI 360
DTE KVVVTNKEVEE ETP +TE+SL N+EQNE EG+E K E RI VEKEEV+
Sbjct: 301 DTEILKVVVTNKEVEEQKETPRTVETEISLANQEQNEREGEEPKEEDNPKRIEVEKEEVV 360
Query: 361 ASEENTNNKNDQEKSETDPILDGESYKEENDH----KATETTEKEGEATDKVAAAVAAAK 420
A EE+ NNKNDQEKSETD +LDGES KEE+D KA ETTEKE E+T+K AK
Sbjct: 361 ALEESINNKNDQEKSETDSVLDGESCKEESDQNSTPKAAETTEKEAESTEK------TAK 420
Query: 421 PQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 455
P+QGGP RKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 PRQGGPGRKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 462
BLAST of Lsi08G011270 vs. NCBI nr
Match:
KAA0064998.1 (serine/arginine repetitive matrix protein 1 [Cucumis melo var. makuwa])
HSP 1 Score: 615.1 bits (1585), Expect = 4.7e-172
Identity = 369/468 (78.85%), Postives = 401/468 (85.68%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSS 60
MATT++KES GLGKER+IT PSSVTIPNNTPTKRTPKSSPRG ISSTDPK+ SFSSSS S
Sbjct: 1 MATTRSKESGGLGKERRITPPSSVTIPNNTPTKRTPKSSPRGFISSTDPKVPSFSSSSPS 60
Query: 61 PSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRS 120
PSS+ + SLSILPEK VPNYLKSTASSR+DHNF+PIT+SKSGPAPIPEGKPSLNRRRS
Sbjct: 61 PSSAPT---SLSILPEKPVPNYLKSTASSRNDHNFKPITRSKSGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERS 180
FDKPPPTAPRLEKPFRSPGPRNRA HVPVRSSSFGAKPST+TT I +STKPG LERS
Sbjct: 121 FDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFGAKPSTSTT---IIGHSTKPGFLERS 180
Query: 181 SSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKNA 240
SSK+SKVGGKPQ PIQ+LK+S+S+VKKSL+RE SN A ASAS SASASAE++PKTKNA
Sbjct: 181 SSKISKVGGKPQPPIQSLKTSSSHVKKSLRRESSNVA---ASASASASASAEIVPKTKNA 240
Query: 241 IEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEK-----NETDDTE 300
+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQ+RIDQVEK + DTE
Sbjct: 241 VEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQVRIDQVEKKAALDKDETDTE 300
Query: 301 NFKVVVTNKEVEE-ETPEAAQTEMSLMNREQNEAEGDEEKTE----RITVEKEEVIASEE 360
KVVVTNKEVEE ETP A+TE+SL NREQNE E +E K E RI VEKEEV+A EE
Sbjct: 301 ILKVVVTNKEVEEKETPGTAETEISLANREQNEGEEEEPKEEDKPKRIGVEKEEVLALEE 360
Query: 361 NTNNKNDQEKSETDPILDGESYKEENDH----KATETTEKEGEATDKVAAAVAAAKPQQG 420
+ NNKNDQEKSETD +LDGES KEEND KA ETTEKE E+T+K AKP+QG
Sbjct: 361 SINNKNDQEKSETDSVLDGESCKEENDQNSTPKAAETTEKEAESTEK------TAKPRQG 420
Query: 421 GPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 455
P RKESPA+YNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 APGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 453
BLAST of Lsi08G011270 vs. NCBI nr
Match:
XP_008445084.1 (PREDICTED: serine/arginine repetitive matrix protein 1 [Cucumis melo])
HSP 1 Score: 612.1 bits (1577), Expect = 4.0e-171
Identity = 367/468 (78.42%), Postives = 399/468 (85.26%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSS 60
MATT++KES GLGKER+IT PSSVTIPNNTPTKRTPKSSPRG ISSTDPK+ SFSSSS S
Sbjct: 1 MATTRSKESGGLGKERRITPPSSVTIPNNTPTKRTPKSSPRGFISSTDPKVPSFSSSSPS 60
Query: 61 PSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRS 120
PSS+ + SLSILPEK VPNYLKSTASSR+DHNF+PIT+SKSGPAPIPEGKPSLNRRRS
Sbjct: 61 PSSAPT---SLSILPEKPVPNYLKSTASSRNDHNFKPITRSKSGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERS 180
FDKPPPTAPRLEKPFRSPGPRNRA HVPVRSSSFGAKPST+TT I +STKPG LERS
Sbjct: 121 FDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFGAKPSTSTT---IIGHSTKPGFLERS 180
Query: 181 SSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKNA 240
SSK+SKVGGKPQ PIQ+LK+S+S+VKKSL+RE SN A AS SASASAE++PKTKNA
Sbjct: 181 SSKISKVGGKPQPPIQSLKTSSSHVKKSLRRESSNVA-----ASASASASAEIVPKTKNA 240
Query: 241 IEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEK-----NETDDTE 300
+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQ+RIDQVEK + DTE
Sbjct: 241 VEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQVRIDQVEKKAALDKDETDTE 300
Query: 301 NFKVVVTNKEVEE-ETPEAAQTEMSLMNREQNEAEGDEEKTE----RITVEKEEVIASEE 360
KVVVTNKEVEE ETP A+TE+SL NREQNE E +E K E RI VEKEEV+A EE
Sbjct: 301 ILKVVVTNKEVEEKETPGTAETEISLANREQNEGEEEEPKEEDKPKRIGVEKEEVLALEE 360
Query: 361 NTNNKNDQEKSETDPILDGESYKEENDH----KATETTEKEGEATDKVAAAVAAAKPQQG 420
+ NNKNDQEKSETD +LDGES KEEND KA ETTEKE E+T+K AKP+QG
Sbjct: 361 SINNKNDQEKSETDSVLDGESCKEENDQNSTPKAAETTEKEAESTEK------TAKPRQG 420
Query: 421 GPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 455
P RKESPA+YNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 APGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 451
BLAST of Lsi08G011270 vs. NCBI nr
Match:
XP_023546370.1 (cell wall protein RBR3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 521.5 bits (1342), Expect = 7.0e-144
Identity = 347/494 (70.24%), Postives = 376/494 (76.11%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKITAPSSVTIPN-NTPTKRTPKSSPRGIISSTDPKLSSFSSSSS 60
MAT++AKESCGLGKERKITAPSSVTIPN NT TKRTPKSSPRGI STD KLSSF SS S
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGI--STDQKLSSFPSSPS 60
Query: 61 SPSSSSSSAPSLSILPEKHVPNYLKSTASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRR 120
SSSSSS SLSILP+KHVPNYLKSTASSRHDHNF+PI KS +GP PIPEGKPSLNRRR
Sbjct: 61 --SSSSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS-AGPTPIPEGKPSLNRRR 120
Query: 121 SFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLER 180
SFDKPPP RL KPFRSP PRNRA H PVRSSSFGAKPST TIV+STK G LER
Sbjct: 121 SFDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST------TIVSSTKTGFLER 180
Query: 181 SSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKN 240
S SK+ KVGGK QQ +Q LKSS SNV+KSLKRE SNAASAS SAEM+PKTKN
Sbjct: 181 SGSKIYKVGGKTQQSVQTLKSS-SNVRKSLKRESSNAASAS---------SAEMVPKTKN 240
Query: 241 AIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQL-RIDQVEK-----NETDD 300
A+EHV QSP VLG NEEDLKKIECELD LPDP PELDK+L DQVEK D
Sbjct: 241 AVEHVGQSPVLVLGANEEDLKKIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQD 300
Query: 301 TENFKVVVTNKEVEEETPEAAQTEMSLM------NREQNEAEG-----DEEKTERITVEK 360
T+ FKVV +NK+V EETP AA+T+ + NREQNE EG +EEK ERI VEK
Sbjct: 301 TKIFKVVGSNKKV-EETPGAAETDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEK 360
Query: 361 EE---VIASEENTNNKNDQEKSETDPIL------------DGESYKEENDHKATETTEKE 420
EE V+ASEE+TNNKN++EKS TDPI DG+S KEEN + +TEKE
Sbjct: 361 EEVFGVVASEESTNNKNEEEKSHTDPIQVGVIVLEHKEVEDGQSSKEENHN----STEKE 420
Query: 421 GEATDKVAAA-------VAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALA 455
EAT+KVAAA AAAKP+QGGP RKESPA+YNHVIEETASKLLEKRKNKVRALA
Sbjct: 421 AEATEKVAAAAAAAAAEAAAAKPRQGGPGRKESPAVYNHVIEETASKLLEKRKNKVRALA 468
BLAST of Lsi08G011270 vs. TAIR 10
Match:
AT5G24880.1 (BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 55.8 bits (133), Expect = 1.0e-07
Identity = 137/473 (28.96%), Postives = 204/473 (43.13%), Query Frame = 0
Query: 32 TKRTPKSSPRGIISSTDPKLSSFSSSSSSP----SSSSSSAPSLSILPEKHVPNYLKSTA 91
T T K+ P + LS S P S++SS S PEK +PNYLK T
Sbjct: 4 TSSTTKAKP------DNQNLSRTKSLGRKPKQPLSTASSEDGSSDQKPEKPLPNYLKPTI 63
Query: 92 SSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHV 151
SSR D + + K+ + + L RRRSFD+PP + L P S PR +
Sbjct: 64 SSRPDAG-KLLKKNNNS----LDDNQKLLRRRSFDRPPSS---LTSPSTSASPRIQ---- 123
Query: 152 PVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERSSS-----KVSKVGGKPQQPIQALK--- 211
S PS + V KP RSSS V K G + P A K
Sbjct: 124 ----KSLNVSPS--RSRDRPAVPREKPVTALRSSSFHGSRNVPKGGNTAKSPPVAPKKSG 183
Query: 212 -SSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEED 271
+S+S KS K N AS A SA M ++ E + + S L V++ D
Sbjct: 184 LNSSSTSSKSKKEGSENVRIKKASDKEIALDSASMSSAQEDHQEEILKVESDHLQVSDHD 243
Query: 272 LKKIECELDPYLPDPMPELDKQLRIDQVEKNETDDTENF--------------------- 331
+++ + E + E + Q ++ Q ++ + E+
Sbjct: 244 IEEPKYEKE--------EKEVQEKVVQANESVEEKAESSGPTPVASPVGKDCNAVVAELE 303
Query: 332 -KVVVTNKEVEEETPEAAQTEMSLMNREQNEAE-----GDEEKTERITVEKEEVIASEEN 391
K++ ++EE+T E + + + N+ + E + + E E++ E +EV + EE
Sbjct: 304 EKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEET 363
Query: 392 TNNKNDQEKSE-----TDPILDGESYKEENDHKATETTEKEGEATDKVAAAV-----AAA 451
T K ++ K E + + E KE++ + E EKE D+ V A
Sbjct: 364 TQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEESAEG 423
Query: 452 KPQQGGPARKESPAMYNHVIEETASKLLEK-RKNKVRALAGAFQTVIDYESSS 454
K ++ +KESP+ YN VI ASK+ E RKNKV ALAGAFQTVIDYE+++
Sbjct: 424 KKKEVVKGKKESPSAYNDVI---ASKMQENPRKNKVLALAGAFQTVIDYETAA 441
BLAST of Lsi08G011270 vs. TAIR 10
Match:
AT5G10660.1 (calmodulin-binding protein-related )
HSP 1 Score: 52.0 bits (123), Expect = 1.5e-06
Identity = 137/451 (30.38%), Postives = 198/451 (43.90%), Query Frame = 0
Query: 25 TIPNNTPTKRTPKSSPRGIISSTDPKLSSFSSSSSSPSSSSSSAPSLSILPEKHVPNYLK 84
T + T TKR K+ R PK SSS P +++ + +I K +PNYLK
Sbjct: 3 TTSSTTKTKRDNKNLTRSKSLGRKPK----PVSSSEPEANADGSDRKTI--GKPLPNYLK 62
Query: 85 STASSRHDHNFRPITKSKSGPAPIPEGKPSLNRRRSFDKPPP--TAPRLEKPFRSPGPRN 144
T SSR D P+ + A E L RRRSFD PP T+P RS
Sbjct: 63 PTISSRPD----PVKFLRKNNA--VEENQKLLRRRSFDHPPSSLTSPSTSSAHRSLNTSP 122
Query: 145 RAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSST 204
H+ + + KP T +T + S++ GL R SS V + P A + S+
Sbjct: 123 AHPHLRDKPAVPREKPVTGLRST-SFHGSSRGGL--RGSSTV-------KSPPVASRGSS 182
Query: 205 SNVKKSLKREPSNAASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKI 264
K L S+ + S +V +S + I D SP +EE++ K+
Sbjct: 183 GVKKSGLSGNSSSKSKKEGSGNVPKKSSGKEISP--------DSSPLASAHEDEEEIVKV 242
Query: 265 ECELDPYLPDPMPELDKQLRIDQVEKNETDDTENFKVVVTNKEVEEETPEAAQTE--MSL 324
E ++ D E+ + +D + F + E +E +P AA TE
Sbjct: 243 ETDVH--------------ISDHGEEPKEEDKDQFAQPDESGEEKETSPVAASTEEQKGE 302
Query: 325 MNREQNEAEGDEEKTERITVEKEEVIASEENTNNKNDQEKSET-------DPILDGESYK 384
+ E E EE E +E+ EE +D+E SET + ++ E K
Sbjct: 303 LIDEDKSTEQIEEPKEPENIEENNSEEEEEVKKKSDDEENSETVATTTDMNEAVNVEESK 362
Query: 385 EENDHKATETTEKEGE---ATDKVAAAVAAAK--PQQGG-----PARKESPAMYNHVIEE 444
EE +A E E+EGE A ++ +A + P++G +KESP YN VI
Sbjct: 363 EEEKEEA-EVKEEEGESSAAKEETTETMAQVEELPEEGTKNEVVQGKKESPTAYNDVI-- 405
Query: 445 TASKLLE-KRKNKVRALAGAFQTVIDYESSS 454
ASK+ E +KNKV ALAGAFQTVIDYE+++
Sbjct: 423 -ASKMQENSKKNKVLALAGAFQTVIDYETAA 405
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LS85 | 2.7e-173 | 78.39 | CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G378000... | [more] |
A0A5A7VBK4 | 2.3e-172 | 78.85 | Serine/arginine repetitive matrix protein 1 OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BBU4 | 1.9e-171 | 78.42 | serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103488... | [more] |
A0A6J1K599 | 1.7e-143 | 69.86 | microtubule-associated protein RP/EB family member 1-like OS=Cucurbita maxima OX... | [more] |
A0A6J1HE16 | 1.6e-141 | 69.78 | neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111462... | [more] |
Match Name | E-value | Identity | Description | |
XP_038886465.1 | 1.1e-186 | 83.59 | uncharacterized protein CG45076 [Benincasa hispida] | [more] |
XP_011649760.1 | 5.5e-173 | 78.39 | neurofilament heavy polypeptide [Cucumis sativus] >KGN62866.1 hypothetical prote... | [more] |
KAA0064998.1 | 4.7e-172 | 78.85 | serine/arginine repetitive matrix protein 1 [Cucumis melo var. makuwa] | [more] |
XP_008445084.1 | 4.0e-171 | 78.42 | PREDICTED: serine/arginine repetitive matrix protein 1 [Cucumis melo] | [more] |
XP_023546370.1 | 7.0e-144 | 70.24 | cell wall protein RBR3-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT5G24880.1 | 1.0e-07 | 28.96 | BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (... | [more] |
AT5G10660.1 | 1.5e-06 | 30.38 | calmodulin-binding protein-related | [more] |