Lsi08G011150 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTAAGAAAAGCTTCCCCTCTTTTTTAATTCTCACAGAAATCCCACCGCCAAGATTTTTCACTTTCCAATTCTCAATTAAAAAAAAATCTATCCGCCGCTTCCTCCTCCATGGACTCCGGCGAATCAAACCTCCCTCTCCTCCTCCAACACTCATACCGCAGATCCAAATCCCTAACCTCCGACGATCTTCGCAACTTCCGAATCAGTCTCAAATGGTGCGCTCTCGACCACTCCTCGGCCGCCGGAAAGTTCTTCTCCTACTTCACCTTCGCTTTCCTGACCTTAGTCGTCCCCGCCGTGACGATCGTCGCCGTCCGAGATCCGGCAGACGATCCGATATCGTTCAATAAACTAGTTCAGGTTCCGGAATCTGGACTGGCGGCGGTCGGATTCTTGAGCCTGTGCGGATTCTTCCGGCGGTACGGACTCCGGCAGCTTCTGTTTCTGGAAGGATTGCAAGAGGATTCTGTGTATGTGCAGAAAGGGTATGCGCGTGAACTGGAGAAGTGGTTCCGTTACGTTGCGTACATTCTTTTTCCGTCGTTCTTCGTTGAGTTGGCCCACAAGATCATATTCTTCTCCACGGTCAAGATTTCATTTCCGTGAGTTTAATTCACTGCTTACCATTAATTAATACATTAATAATTCTTTAATCTAAAATTTCATTTTGGTATATATATACATTCCTTTTTTTTTTTTTTTTTTATTATTATTATTATTAGTCAAGTTTTTTAAAAACAAACCGTTTTCCTCACTATATCTTAAACTTGGTTCAATTTTAATCTTTATTTTTAAATGTCAAATTTTAGTTTTTAAACTTTTAATAAATCTTAAATTTAGTCTCTATTGGTAGTTTATAGTTAATTTTTTTATTAATTTTTATTTTTTATTAGCGTATTTACTATAAATTTTGAAAACATATTCACGTGTTGTGTTACTTTACATAAAAATTATTATGATTATTTGATCAATTTTTATAAAATTTAACTTTGAGATACTAAATTTAAAATTTACTGTAAGTACATTAACTAAAACTGAACATTTGAAAATATAGAGATATAAATTAAATAAAATTTAAATTACAGTTATACATGGACTAAAATAGTATTTTAATCCATTTCAAAAGGTCTATCAATGACTAGCAAATACTCTTTGAATTTGTCAAAGCGAACTTAGCTCATCAATCATTGACACGACCTTCTTAGGTTGTAGGTTCGATCTCTTATCCTTGCACTTATTGAACTTAAAAAAAAAAAAAAAAAACTCTTGAACTTATTTTTGTTTCAAAACTATTATTATATTTTTAAAATTTGCAATATTATCCATCATATTTTATAAATGTTTGAAAACTATCATTGGAATAAAAGTTTGGAATTTGGAATAAAAAATTAGAGTTTAACTATAAACCATGTAGCTATGAGATGATCTAAAATGATGTAATGATCTAAATTTTTATTTTAGTTCATTGTCACATGTTCATTTCACGTCTCAATTAATTCGTCTAAAGTTCTAAAATATTTATACTCTAAAGAGTATTTTAAAAATATTTATGTAAGTTCAAAGATAATAATATTGCAATTTTTTTAAAAAGTATCAGAGTATTTTTTAAATAAATAACAAAATACAATGTTTTTTTTTAACAATTTAACCTTTAAAAAATATAACTACTCTTTTTACTTTGATTTGACCACTTAATATCTAATTGTGCATTAACTAATTCATATGGTACTCTTTTGTTTGTGTAGTGAATAATAAAATATAAGGCTAGCCAAAATAGTTATTTCCTTCATAAATTGAAGGGCTCAATTTTAAATTTCGAAAATTAATGAGTAGATGTTGATGGGCTAATTAAATAGACCTTTTAAACTTTTAAATACGAAAAATACAAAAAGGAAAAAAAGAAAGAATAAAATAAAAGAGAAAAAAATGAGATAAGATTATTATATTTTTTAAAATAAAAAACTACCAAATCTTTAGAAATTTGGAGGAAATTTCAATATTTTTTCTTCCTCTAAATCGGGAGAGTACATTGAAAATGTTAATGCATAAAAGAGAATGAAAAATGCACACAAACGCAACAAGAGAATATAACATATATTTTATGGTTTATATTAAATGTAGTCAACTTTCAAGTTTCTATTTACTTGCTTTTGAAACTTAAAAAAGCAGATCATATAAGTCATAATTATTTTTAGTAATTATTTTATATCACAAAATTACTAGAAATATTTTTAAATTTAATAAAATTAATTGTCTGTTTGTTGGTGATAGACATCGATATACACGGATAGACTACTATCATCTATCACTGTCATCGCTGATAGATAGTGTCATTTTGTTATATTTGTAAATAAGTTGACTCATTTTGCTATATTTGAAAACATCTTAAATTCTTTCGATTTGTTTTAAATAGATATTTCACATATTTAAAACCTTTTTTAACAAATTAATCAATTTATTAGATATATAATTGAATTTTATATTTAATGGAATTCTAAATTTTCAACTCTATATCTAATAGACATAAAATTAAAAGTTTAAGAATTTATAAAACATCTTTTTAACGTTTACAAGCCAAATTGACGCACAAAGTTAAAAATTCATGAACTGAACTTGTAATTTAACCTTAATCTTTTTATTTATATTTCTTTCCATCCACGTGATGAACAGGGTAGGATTTCCAGTGAACTCAATCGTGTTCATATTCGTGTTGGGATCGTGGGTCTATCGAACCGGGGTGTTCTTGCTCGTGTGTGTATTGTTTCGACTCACATGCGAGTTACAAATTCTTAGGCTACAAGGGGTTCACAAGCTATTCGAAACGAGCAACGGGTCGGGATCGGACGCAGTGGTGATCTTCAATGAACATTTGAGGATCAGAAAACAGTTATCAGTTACCAGCCACCGATACCGATTCTTCATAATTGTGTGCTTGCTCGTTATTACAGTTAGCCAGTTCGTTGCGTTGCTCCTGGTTTTGGCATCTAAATCTGACAAAAATTTCTTCAACTCCGGCGATGTTGTGGTATGCTCAAACTTTTATATATACTTTCAATTTCATTATCATATTTTTAGAAATTATTTTATTTTATTTTATTTTATTTTAGGTTAGTTTAAATTCATGTTAAAATATAAAAAAATGTTAAAACTTAAAAACGTATTTATTAATAAATTTGATTCAATGATGAAATTGGAAATTCAGGTTTGCTCAGCGGTTCAATTATGTGGATTCTTCTTGTGCCTGTTCGGAGCTGCAAGAATTACTCATAGAGCACAAGGAATCGCTTCGGTTGCAACCCGATGGCACATGCTAGTCACCTCCGCTGCCACCGGATCCAACCCAACTAAATCTCCGCCGCTACCACCGCCTGTCGATGACAAGAAAAACAATAATGGTAGTGGTGGTGATGATGACGACACTGATTCGGATTCATCGTCCGACGTTTTAATTTCAGTGAGCACACGAGAACCTTCTTCCTTCCAAACGAGACAAGCTTTAGGTCAGTAAATTTCCTCACAAACTGTAGAATAATTTTCAACTATGCTCTTAAATTTTAAAAAAATTCATTTTTACTCTTTAACTTTTAATTTTTGTTTTCCTTTCATAAAAATTATATGGAAAGTTAGCATGACATCATATATGTAAAAATACGACATACGTAACATCATTTACATTTTACAACATAGTGTCACGTAATGGTTTTAACTATATTTTCTTAAATTAAATTATAAATGACAACAACAATGTAAATCTTCAATATAATTAGAAATAATATATAAGCCTTCTAATTTTTTTCACATCATCCACCGCGTCAATTTTCATCTTTCGTTTTAACAATAAATATTCTATTTGCAACCATTTGGAAGTTCAATTGTATTTTTCTTGAAAGATGTATTTAAAAAAAAAAAAAAGTTATGGAGAAAATATTTAAAATTTCTAGAGTTGAATGAATATTTTCGAAGTCCATAACTTCTAAAGTTTAGCCTAAATTTCGAGTCTCTTAATCTATCGACTTGTGAAGTCTATTTAATTTTTATTCCTAAATCTTTAAAGAATATCGGTTTGAACTTCGTATGCTCGTGATATCATAAGAATTGTGAGGCCAGATTCAACACGAAAGTTTAAAAGACTAAATTTTTTTATATAGTATTGAGATTTGAATATTGTGCAAAATTAGATTTGGAATTTTAATTATTTATATGATTGAAGAAAGGGGGATTTTTAAAAATAGAAAAACAAGGGAAATTATTTACACAAAATAGCAAAATATTTAGATAGTTGTGATAGATGCTGATAGAAGTCTATTAGTAATAGAAATGATAAAAGTCTATCGTTGATAGATGCTGATAGAAGTCTATCAATGTCTATCAGTATTTTTTTTACTATTTTCTGTAAATAGTTTGACATTTTTTTTTATATGTGAAAATTTCCCTTGAAGAAATTGTGTTGTGATATTTTTGCAGTGTCATATTTGCAACACAACAATGGGGGAATTACACTGTTTGGATATGCACTAGATCGA TTAAGAAAAGCTTCCCCTCTTTTTTAATTCTCACAGAAATCCCACCGCCAAGATTTTTCACTTTCCAATTCTCAATTAAAAAAAAATCTATCCGCCGCTTCCTCCTCCATGGACTCCGGCGAATCAAACCTCCCTCTCCTCCTCCAACACTCATACCGCAGATCCAAATCCCTAACCTCCGACGATCTTCGCAACTTCCGAATCAGTCTCAAATGGTGCGCTCTCGACCACTCCTCGGCCGCCGGAAAGTTCTTCTCCTACTTCACCTTCGCTTTCCTGACCTTAGTCGTCCCCGCCGTGACGATCGTCGCCGTCCGAGATCCGGCAGACGATCCGATATCGTTCAATAAACTAGTTCAGGTTCCGGAATCTGGACTGGCGGCGGTCGGATTCTTGAGCCTGTGCGGATTCTTCCGGCGGTACGGACTCCGGCAGCTTCTGTTTCTGGAAGGATTGCAAGAGGATTCTGTGTATGTGCAGAAAGGGTATGCGCGTGAACTGGAGAAGTGGTTCCGTTACGTTGCGTACATTCTTTTTCCGTCGTTCTTCGTTGAGTTGGCCCACAAGATCATATTCTTCTCCACGGTCAAGATTTCATTTCCGCTACAAGGGGTTCACAAGCTATTCGAAACGAGCAACGGGTCGGGATCGGACGCAGTGGTGATCTTCAATGAACATTTGAGGATCAGAAAACAGTTATCAGTTACCAGCCACCGATACCGATTCTTCATAATTGTGTGCTTGCTCGTTATTACAGTTAGCCAGTTCGTTGCGTTGCTCCTGGTTTTGGCATCTAAATCTGACAAAAATTTCTTCAACTCCGGCGATGTTGTGGTTTGCTCAGCGGTTCAATTATGTGGATTCTTCTTGTGCCTGTTCGGAGCTGCAAGAATTACTCATAGAGCACAAGGAATCGCTTCGGTTGCAACCCGATGGCACATGCTAGTCACCTCCGCTGCCACCGGATCCAACCCAACTAAATCTCCGCCGCTACCACCGCCTGTCGATGACAAGAAAAACAATAATGGTAGTGGTGGTGATGATGACGACACTGATTCGGATTCATCGTCCGACGTTTTAATTTCAGTGAGCACACGAGAACCTTCTTCCTTCCAAACGAGACAAGCTTTAGTGTCATATTTGCAACACAACAATGGGGGAATTACACTGTTTGGATATGCACTAGATCGA ATGGACTCCGGCGAATCAAACCTCCCTCTCCTCCTCCAACACTCATACCGCAGATCCAAATCCCTAACCTCCGACGATCTTCGCAACTTCCGAATCAGTCTCAAATGGTGCGCTCTCGACCACTCCTCGGCCGCCGGAAAGTTCTTCTCCTACTTCACCTTCGCTTTCCTGACCTTAGTCGTCCCCGCCGTGACGATCGTCGCCGTCCGAGATCCGGCAGACGATCCGATATCGTTCAATAAACTAGTTCAGGTTCCGGAATCTGGACTGGCGGCGGTCGGATTCTTGAGCCTGTGCGGATTCTTCCGGCGGTACGGACTCCGGCAGCTTCTGTTTCTGGAAGGATTGCAAGAGGATTCTGTGTATGTGCAGAAAGGGTATGCGCGTGAACTGGAGAAGTGGTTCCGTTACGTTGCGTACATTCTTTTTCCGTCGTTCTTCGTTGAGTTGGCCCACAAGATCATATTCTTCTCCACGGTCAAGATTTCATTTCCGCTACAAGGGGTTCACAAGCTATTCGAAACGAGCAACGGGTCGGGATCGGACGCAGTGGTGATCTTCAATGAACATTTGAGGATCAGAAAACAGTTATCAGTTACCAGCCACCGATACCGATTCTTCATAATTGTGTGCTTGCTCGTTATTACAGTTAGCCAGTTCGTTGCGTTGCTCCTGGTTTTGGCATCTAAATCTGACAAAAATTTCTTCAACTCCGGCGATGTTGTGGTTTGCTCAGCGGTTCAATTATGTGGATTCTTCTTGTGCCTGTTCGGAGCTGCAAGAATTACTCATAGAGCACAAGGAATCGCTTCGGTTGCAACCCGATGGCACATGCTAGTCACCTCCGCTGCCACCGGATCCAACCCAACTAAATCTCCGCCGCTACCACCGCCTGTCGATGACAAGAAAAACAATAATGGTAGTGGTGGTGATGATGACGACACTGATTCGGATTCATCGTCCGACGTTTTAATTTCAGTGAGCACACGAGAACCTTCTTCCTTCCAAACGAGACAAGCTTTAGTGTCATATTTGCAACACAACAATGGGGGAATTACACTGTTTGGATATGCACTAGATCGA MDSGESNLPLLLQHSYRRSKSLTSDDLRNFRISLKWCALDHSSAAGKFFSYFTFAFLTLVVPAVTIVAVRDPADDPISFNKLVQVPESGLAAVGFLSLCGFFRRYGLRQLLFLEGLQEDSVYVQKGYARELEKWFRYVAYILFPSFFVELAHKIIFFSTVKISFPLQGVHKLFETSNGSGSDAVVIFNEHLRIRKQLSVTSHRYRFFIIVCLLVITVSQFVALLLVLASKSDKNFFNSGDVVVCSAVQLCGFFLCLFGAARITHRAQGIASVATRWHMLVTSAATGSNPTKSPPLPPPVDDKKNNNGSGGDDDDTDSDSSSDVLISVSTREPSSFQTRQALVSYLQHNNGGITLFGYALDR Homology
BLAST of Lsi08G011150 vs. ExPASy TrEMBL
Match: A0A5A7VCT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003340 PE=4 SV=1) HSP 1 Score: 606.7 bits (1563), Expect = 6.4e-170 Identity = 327/404 (80.94%), Postives = 341/404 (84.41%), Query Frame = 0
BLAST of Lsi08G011150 vs. ExPASy TrEMBL
Match: A0A0A0LS65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G377870 PE=4 SV=1) HSP 1 Score: 599.4 bits (1544), Expect = 1.0e-167 Identity = 327/405 (80.74%), Postives = 339/405 (83.70%), Query Frame = 0
BLAST of Lsi08G011150 vs. ExPASy TrEMBL
Match: A0A6J1KJB4 (uncharacterized protein LOC111496225 OS=Cucurbita maxima OX=3661 GN=LOC111496225 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 6.2e-157 Identity = 304/403 (75.43%), Postives = 328/403 (81.39%), Query Frame = 0
BLAST of Lsi08G011150 vs. ExPASy TrEMBL
Match: A0A1S3BDR7 (uncharacterized protein LOC103488559 OS=Cucumis melo OX=3656 GN=LOC103488559 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 1.8e-156 Identity = 306/384 (79.69%), Postives = 320/384 (83.33%), Query Frame = 0
BLAST of Lsi08G011150 vs. ExPASy TrEMBL
Match: A0A6J1GHK9 (uncharacterized protein LOC111454247 OS=Cucurbita moschata OX=3662 GN=LOC111454247 PE=4 SV=1) HSP 1 Score: 561.6 bits (1446), Expect = 2.4e-156 Identity = 305/403 (75.68%), Postives = 327/403 (81.14%), Query Frame = 0
BLAST of Lsi08G011150 vs. NCBI nr
Match: XP_038884363.1 (uncharacterized protein LOC120075225 [Benincasa hispida]) HSP 1 Score: 628.6 bits (1620), Expect = 3.3e-176 Identity = 340/407 (83.54%), Postives = 347/407 (85.26%), Query Frame = 0
BLAST of Lsi08G011150 vs. NCBI nr
Match: KAA0065010.1 (uncharacterized protein E6C27_scaffold82G003340 [Cucumis melo var. makuwa]) HSP 1 Score: 606.7 bits (1563), Expect = 1.3e-169 Identity = 327/404 (80.94%), Postives = 341/404 (84.41%), Query Frame = 0
BLAST of Lsi08G011150 vs. NCBI nr
Match: XP_011649751.1 (uncharacterized protein LOC101214952 [Cucumis sativus] >KGN62851.1 hypothetical protein Csa_022643 [Cucumis sativus]) HSP 1 Score: 599.4 bits (1544), Expect = 2.1e-167 Identity = 327/405 (80.74%), Postives = 339/405 (83.70%), Query Frame = 0
BLAST of Lsi08G011150 vs. NCBI nr
Match: XP_023002362.1 (uncharacterized protein LOC111496225 [Cucurbita maxima]) HSP 1 Score: 563.5 bits (1451), Expect = 1.3e-156 Identity = 304/403 (75.43%), Postives = 328/403 (81.39%), Query Frame = 0
BLAST of Lsi08G011150 vs. NCBI nr
Match: KAG7020327.1 (hypothetical protein SDJN02_17011, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 563.1 bits (1450), Expect = 1.7e-156 Identity = 306/403 (75.93%), Postives = 328/403 (81.39%), Query Frame = 0
BLAST of Lsi08G011150 vs. TAIR 10
Match: AT2G21080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 141 Blast hits to 141 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 330.1 bits (845), Expect = 2.2e-90 Identity = 200/407 (49.14%), Postives = 246/407 (60.44%), Query Frame = 0
BLAST of Lsi08G011150 vs. TAIR 10
Match: AT3G20300.1 (Protein of unknown function (DUF3537) ) HSP 1 Score: 166.8 bits (421), Expect = 3.3e-41 Identity = 120/404 (29.70%), Postives = 198/404 (49.01%), Query Frame = 0
BLAST of Lsi08G011150 vs. TAIR 10
Match: AT1G50630.1 (Protein of unknown function (DUF3537) ) HSP 1 Score: 163.7 bits (413), Expect = 2.8e-40 Identity = 121/407 (29.73%), Postives = 194/407 (47.67%), Query Frame = 0
BLAST of Lsi08G011150 vs. TAIR 10
Match: AT1G50630.2 (Protein of unknown function (DUF3537) ) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-32 Identity = 111/393 (28.24%), Postives = 180/393 (45.80%), Query Frame = 0
BLAST of Lsi08G011150 vs. TAIR 10
Match: AT4G03820.1 (Protein of unknown function (DUF3537) ) HSP 1 Score: 125.6 bits (314), Expect = 8.3e-29 Identity = 97/374 (25.94%), Postives = 178/374 (47.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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