Lsi08G010450 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G010450
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr08: 19019755 .. 19025566 (+)
RNA-Seq ExpressionLsi08G010450
SyntenyLsi08G010450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTAAAGGGGGCCTGTGCATAAACAATATGAAAGAAATAGGGTAACACTGAGGGGGATAAACAACAAGAAGAAAGTGTTTTGTGTTAGGTCATCCAAAGCAATGTCTACCAAAGAAACACAAATCCCTTTATTCTCATTCCAATATAGACATCAAACAATAACAATACAACTTCATCTACACCTATATGATCAACCAACCAACGACTACATTTATTATACTAATGACAATGAAAAATGATTTAATCACAACATATGCAAGTTTCTGAGTAATCACAAACCAGAGGCTCTGGAAGCGTTAATCACATAACCCTCTGGATTATAGGAGCTTACACCACCACCACCACTAGTTCTCCCATGGTCAACCGCCACCGGAGCCATGGTCTGATACTGCGGCGCGGTGGTAAAGTAAACTTGTCTGCCGGTGTTGTCATACGCAACTTGACTGTAGCCAGCCTCATTTATAGTAACTTTTGGCTGCATCGTTTGAATCCCCTCTGTAGTGTAAACCCCAACATTTGGCTGCTGAAGAGAGGCCTGTGGTGCGACCGAATTATGAACTTGGGCTTCACGGTAAGCATGCATTCCATAATAAGGCTGGTGCCCAACTGGTCCGTTGATGGGTCTAATTGTCTGAGCTTGATATAACCCCCCTGCAGGCGGAATTAGATATATTGACTGGTCGGTGGCCAGAGCATTGGCTGAAGCAGCCATTGTATAACCACTAGAGATCATCTGCCTCTCGGGGAAGTACGCCGTAGGGACTGCCAATGGTACAGGAAGAGGAACTGTCGCTGGTGGTGGAGCTGGAGCAATTTTCTCTGCAACTTTTGGTGGGTGAGAATCGCTTGCAGAAGTCTTGGAGTTAGTCTCATCGCTGCTTCTTTCAGTCATCACTTGCAATCTCTGCAAGTCCTGAATCTGCCTCTGAAACTCCAACGGAGAAACAACAGGTTCTCCGACTAAATGACGATCTTCAGATCCACAATCAGACCCAGCGGAAACGTCCTTCACCGCCGTATTCGACACGGTATGTACGGCGGGTAAATCCGTCAAGTTAGAACCAGGAACCGGAGGTGGATGGTAGCCTTTATCAAATCCAAACAAGAAATCAGGATTTGAGGCAGGTCGAGAAGCATCAACAGGCGACGATGAATCTTCCAGAGGCTGAATCCGCACGGAATTCAAAGCATCGACGAACCATTGTCTGTCTGATTTGGGGTCCCGCGAGGCAAGAATCGTCGGGACAGGTGGATTTAGAGGGAAGAGAAAAAGCCTCAACCTCGCAGGCTTGGAGATACGAAACAAACGGTCATACTCCAACATCATGTGCTCAAGATCCTCATCGTTGGTAACAGAAATCAAAGCATCGAGATCTTCGCCAGGGAGTTGGTACTTAAAACAAACAGTAACATCGCAGAGAGAAGATAACCTGGAAGAAAGAGCAGAGAAAGTGATAGTACGATCGACAACGAGAATCTTGGTGTCGCCGCCGGTGTAGGTGAGTTGATTGTCGTGGGCTCTGGGTTGTATCTTGCCGCCATAGCTGCACATGAATTTGATTTTGTAGTTGTTGGTGGAGTTGAGGTTGGAAGAAGGGTCGTCCCAAGAAGGGTTTTCGCAGGAACGAGGAGAGGAGTCGCGAGAATCAGCATAGGAGGAGTAGGAATAGTTATCCATTGGAGGAAAGAATTAAAAAGAGTTTGAACAGAGAAATTGAAGGAAGAAGAAGGAGGAGGAGGAGGGTTTTAGGGTTTGGTAGCCATTGATAACAATGAGAGATTTCTGGGGGGGAAAACAAAAACAAATACTGAAACTGGAAATTTTTAGTTACGGCGGAGAGAGGAGGAGGAAGAAGAAAGAAGAGCCAGAAGAGCGGGTTGTGTGGGCCCAAGAGTTGCGGCTGAGTAGGGCCCATTGTAAGTTGTGTACTCACAGGCGTGGGACCCATTATTTAGTGTTAAAGTAGTTTGACAGCGAGGTTTTTCTTTGTGCTTATTTCTGATTTGGAAACAAGAAAAAACGTGAATGGGTGTTAAGTTACGATAATGCCCTTCCTTGAATGTTAAAATTACCGTTATTGATAAATAAATATAAGGTAATTATTTTAAAACTGTTAAAATATTTTTAAATATAATAAAATGTAAATGTGGTTAAATATATATATATATTTTGTCATCTTAGGTTTAAATATCAATTTAGTGTTCCATTTTTAATTATTTTCGATTTTGCCATTTTTAATTCAACTTTTGAAAGTTTGGTGTTATTTTTTTAAATAATATACAAATGGTAATAATGTTTTTTTTTTAAGTTGAAGGGTAAATTCAACCTCTAGAGCTGGATTTGCATGGAAATTAGAGAGTATAGAGAATCTAATGGTGGACCTTGTACAAATTTGCTAGGTTGGATTTTATACTGATTATGAGGGTATGATTAAAAAAAATAGAGTTTTAAGTGGTTTTATTTATTTATTCATTATTATTATTATTATTATTTAGATTAGTGGTAAATGTAATGTTAAGCCCTAATTTAAGTTAAGTTCATGAAATTGAAAGTATGAGGTTAAAATTTATTTTTCGCGAGTTCAAAACCTTAAGTTAGATTTTCTTTTTCATGTAAATACATGTATTTCACGAATATTTATAACAATAAAGTTTAAACTTAAAATGCATGATGCCAAAGTGAATATAACTCAATTGACTTTCCGTATGTGTTAGCGACTAAAAAGGAAATTAAAAATATATAATTTCTCTAAAGATAAATAAATACATATATAAAATTGCTAACAAACCATAACTTGTACAAATTAATAACTAGTCATTGTATTTTTCTTTTGATACCAAAAGGTCGACTCTCTACTATGCATGTTTCTTGTGATTGGAAAAAAAAAAAAAAAAAACACAATGGTTCTTATACAATAAATCCTCATGAAAACTTTAAAAGGCTATTTTTTTATAGACTTTAAAATTATTCTTGTTTTCTCATCATGTTTTTTAAACAATAAATTTCATATTCTTTTTTAAAAAAAAATTCACTTTTGGCCAAGTTTTAAAAATAAAAATTACGTTTGATATTTGAAAACTAATTAAGCAATAAGATATTTGAAAACTAAGTTTATAAACACTAAATCCATTTTGTCTTATACTCTTATTATCCAGTTTATACTAATATTTTAAAAAATAAAGTTAAAATTTTGAAAACTAAAAATTCCTTTTTATTAGAATTTGACTAAAAAATCAAATATTTGTTTAAAAAAAATGTAAAAATAAAAAATTGATTAAAAAAAGCATAAATATCACAACTATAAAACTAAAAATTAAATCGATATCAAAATAGACTTGAAGAACTATTTTTAATTTTTTAGTTTTTAAAATTTAGCTGGAATTTTAAAAACATCCACACAAAAAAATAGACAATAAAACAAAATTTTCATTGGAGAAATTGTGGAAGCTATATTTATAAGTTTAATTTTCAAATGCAAACACGAAAAGCAAGTAACGGGCCTTAAAATTTGAAATATATTCGGAAAAGAAAAAAAAAAGTAATTTTTTTTTTTTAATATGATTTTTATGTTTCTCGTTTTGTTGCGAAAGACCAACAAGGTTTTGAAGGGCCATCAATGCAAGGGCCCCTTTAAATCATGTGCTTTTGTCGTCGGTTTCTTTTCACTATTTTAAATTCAAATTTAAAATGTTAAAACTTTGGTCGGCAACTATTCAATTTTTAGTTTTTATTTTTTAAAATTAAATATATCTTCTCTCAAATTTTTATTTACTAAAATTAAATTTATTTTCTTTTAAGCCTCTTGAGCACAAACCAATCTTAAGATCACACATTACTCGACTTCGTAAGGCTGCATTTAGTATATAAAGTCTACCATTCCAAAGTTTGCCTCGGTTGAATGGTCTATAGGGTGATTAATCTAGATCTTTTGGGCTCAAACCAATCGTGGAATCATACTTTACTAGATCTCGTATGGCAACACTTAGTATGATTTTAACTCGTCGTCTTAAGATCTGCATCAGTTTTACGGACTTAAAAGTGATTAGTCCAAGTATTTTGGACTGAAACCAATCGTGGGTTACACGCTTTACTCGGCCTCGTAAGGCTGCACTTTGTGTATAAAGTCTACCATCTTGAGGTTTGTCTCGGTTTAATGGACTGTAGAGTGATCAATCTCAGCCTCGTCGGGTTCAAACGAAATCACACTTTACTTGGCCTCATAAGGCAACACTTAGTGTGATTTTGATACCCCTCAGAGGTATGTCTCGGTGGGTTTAAGTAGGGGTTTTCTTCCTTAATGATTTGTTACTGGGTGATGCACCTGTCGTGATTGATGTGTGTCAGCTGCACTTACACAATATACTTGAAAGATTGCCAAACTCTAGAGAGAGATCGAGAAGAAATTAAACATTTGGATAGTGAAATAAACCCCAAAACCTCGGAAGAAGTTTCAGCCATGGGAGAACTAGAAGACCTCAACCATTGAGCTTCTTTTGATGTAAAAATGAAAATATAAGCTCCAAATTGGACAAGAGACCAAAAAACGAAATTATTTTTGCAAACTTACACTTTTGAGGACTTAATTTTAACACTTATTTAAATTTGAGGGTTAAATTCTTACCATTAAATGTCTATGGTCCAATTTCTACAACTTTGATGGTTCAACTTTTACACTTATAATTTTAAGGACTCAATTTTTACCATTAAAAATTTGAATATGTAATTACAACAACCGTCATACTTTAGAAAGTAGTTTTTGAAATTTCCCCTTAAATTTAGCTAGAGATCTTGTTGCCCATGTTAACAAGCCAAATTCCAAAAGAATACATGTGCATTGGGCTTGGGCCTAATATTGGCCTCAAGTCATTTCTTTTCTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCATATTACAGATCTTGGGCTTGATACTTCCGAAACTGTAGGCCCACCATTAGGTCTGAAAACTGAGAAATTGTTGCACGTACATTTATTTTCAAAATTACTCCACAAAATTCTAACATAAGATAAAAATGTAGTTCTCGTACACTAATTTAGTCTCAAATTTTAAAAATTTCCATTATATATATATATAAGCTTTAGATTAATAAGTATTTCCATCCATCCTCATTAACACTAATGACAAAAAATGTCAAATGGTTATGCTAAAGTTCTCTCAAATTTATAAGACGTCAATTAATAAAGACAGTATATTTATCTTAAATTGATATATGAATGTTCTCATTTATATAAGATGATAAATTAGTTGAAAATTTATCAACCTAAACATAATTCAATACGTTGAAACGTTTGTGAAATTTTAATCATTATATTGATAATAATAATAAAAAATCAATATACACATAAACTTCCAAACTGAAAGACAGCAAAGTCAATAAAATGAGCAAGTTGAAGAGTATGTTTCCAAGTATTGAGGTAAGAGCACATGGCTTTGAAGCATTATATTATTTTGTAGCAAAAGCAAAAGATGAGTGAACTAAAAGCATGGTTTTTATCCACAACTTGAAGTTGATTAATTTTACAAAGTATGTTCTTTGGATTTTTGGTGTATTTTTTAAATATCAGAGTCAAAAACAACAGGCTCCTGTTTTTTAG

mRNA sequence

ATGGAAGGCTCTGGAAGCGTTAATCACATAACCCTCTGGATTATAGGAGCTTACACCACCACCACCACTAGTTCTCCCATGGTCAACCGCCACCGGAGCCATGGTCTGATACTGCGGCGCGGTGGTAAAGTAAACTTGTCTGCCGGTGTTGTCATACGCAACTTGACTGTAGCCAGCCTCATTTATAGTAACTTTTGGCTGCATCGTTTGAATCCCCTCTGTAGTGTAAACCCCAACATTTGGCTGCTGAAGAGAGGCCTGTGGTGCGACCGAATTATGAACTTGGGCTTCACGTCATCACTTGCAATCTCTGCAAGTCCTGAATCTGCCTCTGAAACTCCAACGGAGAAACAACAGGTTCTCCGACTAAATGACGATCTTCAGATCCACAATCAGACCCAGCGGAAACGTCCTTCACCGCCGTATTCGACACGGTATGTACGGCGGGAACCGGAGGTGGATGGTAGCCTTTATCAAATCCAAACAAGAAATCAGGATTTGAGGCAGGTCGAGAAGCATCAACAGGCGACGATGAATCTTCCAGAGGCTGAATCCGCACGGAATTCAAAGCATCGACGAACCATTGTCTGTCTGATTTGGGGTCCCGCGAGGCAAGAATCGTCGGGACAGAGGGAAGAGAAAAAGCCTCAACCTCGCAGGCTTGGAGATACGAAACAAACGGTCATACTCCAACATCATGTGCTCAAGATCCTCATCGTTGGTAACAGAAATCAAAGCATCGAGATCTTCGCCAGGGAGTTGAGCAGAGAAAGTGATAGTACGATCGACAACGAGAATCTTGGTGTCGCCGCCGGTGTAGGTGAGTTGATTGTCGTGGGCTCTGGGTTGTATCTTGCCGCCATAGCTGCACATGAATTTGATTTTGTAGTTGTTGGTGGAGTTGAGGGTCGTCCCAAGAAGGGTTTTCGCAGGAACGAGGAGAGGAGTCGCGAGAATCAGCATAGGAGGAGTAGGAATAGTTATCCATTGGAGGAAAGAATTAAAAAGAGTTTGAACAGAGAAATTGAAGGAAGAAGAAGGAGGAGGAGGAGGGTTTTAGGTTACGGCGGAGAGAGGAGGAGGAAGAAGAAAGAAGAGCCAGAAGAGCGGGTTGTGTGGGCCCAAGAGTTGCGGCTGAGTAGGGCCCATTGTAAGTTGTGTACTCACAGGCGTGGGACCCATTATTTAGTGTTAAAGGTAAATTCAACCTCTAGAGCTGGATTTGCATGGAAATTAGAGAGTATAGAGAATCTAATGGTGGACCTTAGTGATCAATCTCAGCCTCGTCGGGTTCAAACGAAATCACACTTTACTTGGCCTCATAAGGCAACACTTAGTGTGATTTTGATACCCCTCAGAGATCTTGGGCTTGATACTTCCGAAACTGTAGGCCCACCATTAGGTCTGAAAACTGAGAAATTGTTGCACAGTCAAAAACAACAGGCTCCTGTTTTTTAG

Coding sequence (CDS)

ATGGAAGGCTCTGGAAGCGTTAATCACATAACCCTCTGGATTATAGGAGCTTACACCACCACCACCACTAGTTCTCCCATGGTCAACCGCCACCGGAGCCATGGTCTGATACTGCGGCGCGGTGGTAAAGTAAACTTGTCTGCCGGTGTTGTCATACGCAACTTGACTGTAGCCAGCCTCATTTATAGTAACTTTTGGCTGCATCGTTTGAATCCCCTCTGTAGTGTAAACCCCAACATTTGGCTGCTGAAGAGAGGCCTGTGGTGCGACCGAATTATGAACTTGGGCTTCACGTCATCACTTGCAATCTCTGCAAGTCCTGAATCTGCCTCTGAAACTCCAACGGAGAAACAACAGGTTCTCCGACTAAATGACGATCTTCAGATCCACAATCAGACCCAGCGGAAACGTCCTTCACCGCCGTATTCGACACGGTATGTACGGCGGGAACCGGAGGTGGATGGTAGCCTTTATCAAATCCAAACAAGAAATCAGGATTTGAGGCAGGTCGAGAAGCATCAACAGGCGACGATGAATCTTCCAGAGGCTGAATCCGCACGGAATTCAAAGCATCGACGAACCATTGTCTGTCTGATTTGGGGTCCCGCGAGGCAAGAATCGTCGGGACAGAGGGAAGAGAAAAAGCCTCAACCTCGCAGGCTTGGAGATACGAAACAAACGGTCATACTCCAACATCATGTGCTCAAGATCCTCATCGTTGGTAACAGAAATCAAAGCATCGAGATCTTCGCCAGGGAGTTGAGCAGAGAAAGTGATAGTACGATCGACAACGAGAATCTTGGTGTCGCCGCCGGTGTAGGTGAGTTGATTGTCGTGGGCTCTGGGTTGTATCTTGCCGCCATAGCTGCACATGAATTTGATTTTGTAGTTGTTGGTGGAGTTGAGGGTCGTCCCAAGAAGGGTTTTCGCAGGAACGAGGAGAGGAGTCGCGAGAATCAGCATAGGAGGAGTAGGAATAGTTATCCATTGGAGGAAAGAATTAAAAAGAGTTTGAACAGAGAAATTGAAGGAAGAAGAAGGAGGAGGAGGAGGGTTTTAGGTTACGGCGGAGAGAGGAGGAGGAAGAAGAAAGAAGAGCCAGAAGAGCGGGTTGTGTGGGCCCAAGAGTTGCGGCTGAGTAGGGCCCATTGTAAGTTGTGTACTCACAGGCGTGGGACCCATTATTTAGTGTTAAAGGTAAATTCAACCTCTAGAGCTGGATTTGCATGGAAATTAGAGAGTATAGAGAATCTAATGGTGGACCTTAGTGATCAATCTCAGCCTCGTCGGGTTCAAACGAAATCACACTTTACTTGGCCTCATAAGGCAACACTTAGTGTGATTTTGATACCCCTCAGAGATCTTGGGCTTGATACTTCCGAAACTGTAGGCCCACCATTAGGTCTGAAAACTGAGAAATTGTTGCACAGTCAAAAACAACAGGCTCCTGTTTTTTAG

Protein sequence

MEGSGSVNHITLWIIGAYTTTTTSSPMVNRHRSHGLILRRGGKVNLSAGVVIRNLTVASLIYSNFWLHRLNPLCSVNPNIWLLKRGLWCDRIMNLGFTSSLAISASPESASETPTEKQQVLRLNDDLQIHNQTQRKRPSPPYSTRYVRREPEVDGSLYQIQTRNQDLRQVEKHQQATMNLPEAESARNSKHRRTIVCLIWGPARQESSGQREEKKPQPRRLGDTKQTVILQHHVLKILIVGNRNQSIEIFARELSRESDSTIDNENLGVAAGVGELIVVGSGLYLAAIAAHEFDFVVVGGVEGRPKKGFRRNEERSRENQHRRSRNSYPLEERIKKSLNREIEGRRRRRRRVLGYGGERRRKKKEEPEERVVWAQELRLSRAHCKLCTHRRGTHYLVLKVNSTSRAGFAWKLESIENLMVDLSDQSQPRRVQTKSHFTWPHKATLSVILIPLRDLGLDTSETVGPPLGLKTEKLLHSQKQQAPVF
Homology
[Close]
BLAST of Lsi08G010450 vs. ExPASy TrEMBL
Match: A0A498HW99 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_016637 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.2e-11
Identity = 55/127 (43.31%), Postives = 71/127 (55.91%), Query Frame = 0 

Query: 201 GPARQESSG----QREEKKPQPRRLGDTKQTVILQHHVLKILIVGNRNQSIEIFAREL-- 260
           G A  E+SG    +REEK        D  + V+L HHV+++L+VG+ ++S+EIFA EL  
Sbjct: 117 GLAGAEASGSVAVKREEK--------DAVEPVVLDHHVVEVLVVGDGDESVEIFAGELVL 176

Query: 261 ------------------SRESDSTIDNENLGVAAGVGELIVVGSGLYLAAIAAHEFDFV 304
                             S E D  ID E+ GV A VGEL+VVG+GL  AA+AAHE DFV
Sbjct: 177 ETNGIVRGVAEGGELGDESGELDIAIDCEDFGVTADVGELVVVGAGLDFAAVAAHELDFV 235

[Close]
BLAST of Lsi08G010450 vs. ExPASy TrEMBL
Match: A0A540NN95 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_001899 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-10
Identity = 58/154 (37.66%), Postives = 89/154 (57.79%), Query Frame = 0 

Query: 206 ESSG----QREEKKPQPRRL-GDTKQTVILQHHVLKILIVGNRNQSIEIFA--------- 265
           E+SG    +RE+K+ +P RL G   ++ +L HHV+++ +VG+R +++EIFA         
Sbjct: 68  EASGSVAVKREKKELEPGRLSGSAVESAVLDHHVVEVFVVGDRYENVEIFAGKLVLEVNG 127

Query: 266 -----------RELSRESDSTIDNENLGVAAGVGELIVVGSGLYLAAIAAHEFDFVVVGG 325
                      R+ +++ D  IDNE+ GV A VG+L+V+G+GL  A +AAHE DF VVGG
Sbjct: 128 VIRGVAEGGKLRDENKKLDIAIDNEDFGVTADVGKLVVMGAGLDFAVVAAHELDF-VVGG 187

Query: 326 VE---GRPKKG----FRRNEERSRENQHRRSRNS 328
            E   G   KG    F  +E +SR +   R R++
Sbjct: 188 YERAFGSLAKGCRSQFHGSEGKSRGSPASRHRSA 220

[Close]
BLAST of Lsi08G010450 vs. ExPASy TrEMBL
Match: A0A059BR08 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02169 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.3e-10
Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 0 

Query: 224 TKQTVILQHHVLKILIVGNRNQSIEIFARELSRES--------------------DSTID 283
           ++  ++LQHHVL++L+VG+ ++ +E+ A EL  E+                    D+ +D
Sbjct: 18  SRAPIVLQHHVLEVLVVGDGDEGVEVLAGELVLEAGLGGGGAAEGGELGHEGGELDAAVD 77

Query: 284 NENLGVAAGVGELIVVGSGLYLAAIAAHEFDFVVVG 300
            E+LG+AA VGEL+VVG+GL LAA+AAHE D V VG
Sbjct: 78  GEDLGLAADVGELVVVGAGLDLAAVAAHEADAVAVG 113

[Close]
BLAST of Lsi08G010450 vs. ExPASy TrEMBL
Match: A0A2P5A7R3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_360100 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-09
Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0 

Query: 212 EEKKPQPRRL-GDTKQTVILQHHVLKILIVGNRNQSIEIFAREL---------------- 271
           EE++P P  L G   + VIL HHVL++++VG+ +Q +E+  REL                
Sbjct: 228 EEEQPHPGGLGGGAVEAVILVHHVLEVVVVGDGDQGVEVLPRELVLERHVTLGEGGELGD 287

Query: 272 -SRESDSTIDNENLGVAAGVGELIVVGSGLYLAAIAAHEFDFVVVGGVEGR 305
              E DST+D E+LG+AA V EL+VVG+G  L AIAAHE   V +    GR
Sbjct: 288 HGGELDSTVDGEDLGLAADVAELVVVGTGEDLTAIAAHELGLVALVSRWGR 338

[Close]
BLAST of Lsi08G010450 vs. ExPASy TrEMBL
Match: A0A2P5F7D7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_104260 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-05
Identity = 57/203 (28.08%), Postives = 95/203 (46.80%), Query Frame = 0 

Query: 114 PTEKQQVLRLNDDLQIHNQTQRKRPSPPYSTRYVRREPEVDGSLYQIQTRNQDLRQVEKH 173
           P+   ++  LN  L+ H + +R+R   P S+     E E +  + + +        + +H
Sbjct: 107 PSPNLKLRSLNQRLR-HRRRRRRRRRNPNSSSDPLLETEQEVDVVRARGFRGRFGSMTRH 166

Query: 174 QQATMNLPEAESARNSKHRRTIVCLIWGPARQESSGQREEKKPQPRRL-GDTKQTVILQH 233
           Q  +++       R  +H            R +  G  EE++P P  L G   + V+L H
Sbjct: 167 QIQSIDELVTIGGRTVRHET-------AGGRVDHHG--EEEQPHPGGLGGGAVEAVVLVH 226

Query: 234 HVLKILIVGNRNQSIEIFAREL-----------------SRESDSTIDNENLGVAAGVGE 293
           HVL++++VG+ +Q +E+   EL                   E D  +D E+LG+A+ V E
Sbjct: 227 HVLEVVVVGDGDQGVEVLPGELVLERHVALAEGGELGDHGGELDGPVDGEDLGLASDVAE 286

Query: 294 LIVVGSGLYLAAIAAHEFDFVVV 299
           L+VVG+G  L AIAAHE   V +
Sbjct: 287 LVVVGTGEDLTAIAAHELGLVAL 299

[Close]
BLAST of Lsi08G010450 vs. NCBI nr
Match: RXH73815.1 (hypothetical protein DVH24_016637 [Malus domestica])

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-10
Identity = 55/127 (43.31%), Postives = 71/127 (55.91%), Query Frame = 0 

Query: 201 GPARQESSG----QREEKKPQPRRLGDTKQTVILQHHVLKILIVGNRNQSIEIFAREL-- 260
           G A  E+SG    +REEK        D  + V+L HHV+++L+VG+ ++S+EIFA EL  
Sbjct: 117 GLAGAEASGSVAVKREEK--------DAVEPVVLDHHVVEVLVVGDGDESVEIFAGELVL 176

Query: 261 ------------------SRESDSTIDNENLGVAAGVGELIVVGSGLYLAAIAAHEFDFV 304
                             S E D  ID E+ GV A VGEL+VVG+GL  AA+AAHE DFV
Sbjct: 177 ETNGIVRGVAEGGELGDESGELDIAIDCEDFGVTADVGELVVVGAGLDFAAVAAHELDFV 235

[Close]
BLAST of Lsi08G010450 vs. NCBI nr
Match: TQE12508.1 (hypothetical protein C1H46_001899 [Malus baccata])

HSP 1 Score: 76.3 bits (186), Expect = 8.4e-10
Identity = 58/154 (37.66%), Postives = 89/154 (57.79%), Query Frame = 0 

Query: 206 ESSG----QREEKKPQPRRL-GDTKQTVILQHHVLKILIVGNRNQSIEIFA--------- 265
           E+SG    +RE+K+ +P RL G   ++ +L HHV+++ +VG+R +++EIFA         
Sbjct: 68  EASGSVAVKREKKELEPGRLSGSAVESAVLDHHVVEVFVVGDRYENVEIFAGKLVLEVNG 127

Query: 266 -----------RELSRESDSTIDNENLGVAAGVGELIVVGSGLYLAAIAAHEFDFVVVGG 325
                      R+ +++ D  IDNE+ GV A VG+L+V+G+GL  A +AAHE DF VVGG
Sbjct: 128 VIRGVAEGGKLRDENKKLDIAIDNEDFGVTADVGKLVVMGAGLDFAVVAAHELDF-VVGG 187

Query: 326 VE---GRPKKG----FRRNEERSRENQHRRSRNS 328
            E   G   KG    F  +E +SR +   R R++
Sbjct: 188 YERAFGSLAKGCRSQFHGSEGKSRGSPASRHRSA 220

[Close]
BLAST of Lsi08G010450 vs. NCBI nr
Match: KCW68548.1 (hypothetical protein EUGRSUZ_F02169 [Eucalyptus grandis])

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-09
Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 0 

Query: 224 TKQTVILQHHVLKILIVGNRNQSIEIFARELSRES--------------------DSTID 283
           ++  ++LQHHVL++L+VG+ ++ +E+ A EL  E+                    D+ +D
Sbjct: 18  SRAPIVLQHHVLEVLVVGDGDEGVEVLAGELVLEAGLGGGGAAEGGELGHEGGELDAAVD 77

Query: 284 NENLGVAAGVGELIVVGSGLYLAAIAAHEFDFVVVG 300
            E+LG+AA VGEL+VVG+GL LAA+AAHE D V VG
Sbjct: 78  GEDLGLAADVGELVVVGAGLDLAAVAAHEADAVAVG 113

[Close]
BLAST of Lsi08G010450 vs. NCBI nr
Match: PON32570.1 (hypothetical protein PanWU01x14_360100 [Parasponia andersonii])

HSP 1 Score: 74.7 bits (182), Expect = 2.4e-09
Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0 

Query: 212 EEKKPQPRRL-GDTKQTVILQHHVLKILIVGNRNQSIEIFAREL---------------- 271
           EE++P P  L G   + VIL HHVL++++VG+ +Q +E+  REL                
Sbjct: 228 EEEQPHPGGLGGGAVEAVILVHHVLEVVVVGDGDQGVEVLPRELVLERHVTLGEGGELGD 287

Query: 272 -SRESDSTIDNENLGVAAGVGELIVVGSGLYLAAIAAHEFDFVVVGGVEGR 305
              E DST+D E+LG+AA V EL+VVG+G  L AIAAHE   V +    GR
Sbjct: 288 HGGELDSTVDGEDLGLAADVAELVVVGTGEDLTAIAAHELGLVALVSRWGR 338

[Close]
BLAST of Lsi08G010450 vs. NCBI nr
Match: PON93723.1 (LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_104260 [Trema orientale])

HSP 1 Score: 61.2 bits (147), Expect = 2.8e-05
Identity = 57/203 (28.08%), Postives = 95/203 (46.80%), Query Frame = 0 

Query: 114 PTEKQQVLRLNDDLQIHNQTQRKRPSPPYSTRYVRREPEVDGSLYQIQTRNQDLRQVEKH 173
           P+   ++  LN  L+ H + +R+R   P S+     E E +  + + +        + +H
Sbjct: 107 PSPNLKLRSLNQRLR-HRRRRRRRRRNPNSSSDPLLETEQEVDVVRARGFRGRFGSMTRH 166

Query: 174 QQATMNLPEAESARNSKHRRTIVCLIWGPARQESSGQREEKKPQPRRL-GDTKQTVILQH 233
           Q  +++       R  +H            R +  G  EE++P P  L G   + V+L H
Sbjct: 167 QIQSIDELVTIGGRTVRHET-------AGGRVDHHG--EEEQPHPGGLGGGAVEAVVLVH 226

Query: 234 HVLKILIVGNRNQSIEIFAREL-----------------SRESDSTIDNENLGVAAGVGE 293
           HVL++++VG+ +Q +E+   EL                   E D  +D E+LG+A+ V E
Sbjct: 227 HVLEVVVVGDGDQGVEVLPGELVLERHVALAEGGELGDHGGELDGPVDGEDLGLASDVAE 286

Query: 294 LIVVGSGLYLAAIAAHEFDFVVV 299
           L+VVG+G  L AIAAHE   V +
Sbjct: 287 LVVVGTGEDLTAIAAHELGLVAL 299

The following BLAST results are available for this feature:
BLAST of Lsi08G010450 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi08G010450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A498HW996.2e-1143.31Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_016637 PE=4 SV=1[more]
A0A540NN954.0e-1037.66Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_001899 PE=4 SV=1[more]
A0A059BR085.3e-1042.71Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02169 PE=4 SV... [more]
A0A2P5A7R31.2e-0942.34Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_360100 PE... [more]
A0A2P5F7D71.3e-0528.08Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_104260 PE=4 SV... [more]
BLAST of Lsi08G010450 vs. NCBI nr
Match NameE-valueIdentityDescription
RXH73815.11.3e-1043.31hypothetical protein DVH24_016637 [Malus domestica][more]
TQE12508.18.4e-1037.66hypothetical protein C1H46_001899 [Malus baccata][more]
KCW68548.11.1e-0942.71hypothetical protein EUGRSUZ_F02169 [Eucalyptus grandis][more]
PON32570.12.4e-0942.34hypothetical protein PanWU01x14_360100 [Parasponia andersonii][more]
PON93723.12.8e-0528.08LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_104260 [Trema orientale][more]
BLAST of Lsi08G010450 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..330

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G010450.1Lsi08G010450.1mRNA