Lsi08G010390 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTCCCTCCAATCAATTTATTAACAGCTAATAAACGAATATTTTTGTTTTCTTAGAGCTAGTTTTTTTTTAAAAAAAAGATTTTTGAATAAAAAATGATAAGTTTAATGTAATTATAAAAATATGTGACGTGGCAATGTCGTGGCTTTTCCTCCCATGGACGTATTAATAATTAGAAATTAATTGAAACGCTACCTCACAACATGATTGAAATTATTAAAAATGGAAAAAGATGTATTAGCTTTCTCTCTCCTTGCATTTACATTAGCTGGCAATCCTCCTCAATCACCTCGATGTCATCGTCCCCAACTTTAATCCAACGGCTCTCATTTACCTCTCATTCTACATTCGTCGCAGGCTAGCACAGCTCTTTTTTCTTTTTCTTTTTTCTTTTCTTTTTTTGGGTTTTAAGGCCGCCCGCGCATCTTTACCAAACGGTGAAAACGCAAATCCCTTTTTCTCTCTGTATCATTTTCTTCTGCTCGCCGGAGTTCAAAAATGGCCGCCGCCGTGCCGGAAAATCTCACTCGCGAGCAATATGTGTACCTAGCGAAGCTTGCTGAGCAGGCCGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCGGGCTCTGAGCTCTCTGTTGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAAAAGGAAGAGAGCCGTAAGAATGAAGAGCACGTTGTTCTTGTTAAGGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGATGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCCTCCGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGTATGTGTGGCTTTTTTTTTTTTTCTTTTTTTTTTTTGTGTGTTATTATTGAGATATTTTTGAATTAGTGCTGCTTTTATGGACCTGTGAGGTTGAAAATTTGACTAGTGGATTGACTTTGAATACTGATTTAGTATCGCTACCAAACATCCCTACTTATCCGATCCATCTTTTACTGTTGTTATGTTTCCGCGCTCTAAGTTACAGCCTTCTCTTACAGAAATTAAATCTTGATTTAGCCTCTTCCGATGGGTTTCAAATTGAAGACGATTTTTCTTTATTACTCTGTTTTTCGTTGCTTTTCTCGTGGGATCTCCAGTCTCCAAGAGATCATTTCTATGTGCAACCTCTTTTAATGGTTTATTTTAATAATTGAATAAAAAGATATTAGGATTTCTCAATTCTGTAATATGGGTGTTTGAGATTGGAGTATTCTGAATGCTGATTTTGCACTTGTTGGATTTTATGCTATGAAGGATGTCGCAGTTGCAGATCTTGCACCCACTCATCCGATAAGGCTAGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGTAAGTTTGATCTTTCTTGTTGCATTCCCGTTGTACATTATTTTTCTTTGTTTATTTCTCTTTGTTTTATCATTGAGAAGAAGTGGGCTGATTCTGGCACACTTTTGCTTTTATATCTGGGGCCTCCTTTTATAGATCTTTGTCATATTGTATTTTTTCTGGGTTATCAAACTGTTCCTAAGAAATTGTGTCAGCTATTACTATTACTGGTGCGACTTGGTCAAACTATCGTCTTTACGCTAATTGCTTTATGTGTTGGCAAGGGGCCTTCCTAGTTCCTCCTAAAACTTGATTTCTATGATTGTCGCTGGTTTAGGATCACTCATGCAGGCGTGAACACCACTGTACATATGAAACAATTTTACGTGGATCTTACAATTGTAGGCTTGCATATGCATATTTGGATACGTTTGTTTAA CTTCCCTCCAATCAATTTATTAACAGCTAATAAACGAATATTTTTGTTTTCTTAGAGCTAGTTTTTTTTTAAAAAAAAGATTTTTGAATAAAAAATGATAAGTTTAATGTAATTATAAAAATATGTGACGTGGCAATGTCGTGGCTTTTCCTCCCATGGACGTATTAATAATTAGAAATTAATTGAAACGCTACCTCACAACATGATTGAAATTATTAAAAATGGAAAAAGATGTATTAGCTTTCTCTCTCCTTGCATTTACATTAGCTGGCAATCCTCCTCAATCACCTCGATGTCATCGTCCCCAACTTTAATCCAACGGCTCTCATTTACCTCTCATTCTACATTCGTCGCAGGCTAGCACAGCTCTTTTTTCTTTTTCTTTTTTCTTTTCTTTTTTTGGGTTTTAAGGCCGCCCGCGCATCTTTACCAAACGGTGAAAACGCAAATCCCTTTTTCTCTCTGTATCATTTTCTTCTGCTCGCCGGAGTTCAAAAATGGCCGCCGCCGTGCCGGAAAATCTCACTCGCGAGCAATATGTGTACCTAGCGAAGCTTGCTGAGCAGGCCGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCGGGCTCTGAGCTCTCTGTTGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAAAAGGAAGAGAGCCGTAAGAATGAAGAGCACGTTGTTCTTGTTAAGGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGATGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCCTCCGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGATGTCGCAGTTGCAGATCTTGCACCCACTCATCCGATAAGGCTAGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGATCACTCATGCAGGCGTGAACACCACTGTACATATGAAACAATTTTACGTGGATCTTACAATTGTAGGCTTGCATATGCATATTTGGATACGTTTGTTTAA ATGGCCGCCGCCGTGCCGGAAAATCTCACTCGCGAGCAATATGTGTACCTAGCGAAGCTTGCTGAGCAGGCCGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCGGGCTCTGAGCTCTCTGTTGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAAAAGGAAGAGAGCCGTAAGAATGAAGAGCACGTTGTTCTTGTTAAGGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGATGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCCTCCGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGATGTCGCAGTTGCAGATCTTGCACCCACTCATCCGATAAGGCTAGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGATCACTCATGCAGGCGTGAACACCACTGTACATATGAAACAATTTTACGTGGATCTTACAATTGTAGGCTTGCATATGCATATTTGGATACGTTTGTTTAA MAAAVPENLTREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVESELSDVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEDHSCRREHHCTYETILRGSYNCRLAYAYLDTFV Homology
BLAST of Lsi08G010390 vs. ExPASy Swiss-Prot
Match: P93207 (14-3-3 protein 10 OS=Solanum lycopersicum OX=4081 GN=TFT10 PE=2 SV=2) HSP 1 Score: 337.0 bits (863), Expect = 1.7e-91 Identity = 173/207 (83.57%), Postives = 191/207 (92.27%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy Swiss-Prot
Match: P48348 (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana OX=3702 GN=GRF8 PE=1 SV=2) HSP 1 Score: 337.0 bits (863), Expect = 1.7e-91 Identity = 172/199 (86.43%), Postives = 190/199 (95.48%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy Swiss-Prot
Match: Q96451 (14-3-3-like protein B (Fragment) OS=Glycine max OX=3847 GN=GF14B PE=2 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 6.5e-91 Identity = 170/201 (84.58%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy Swiss-Prot
Match: P93206 (14-3-3 protein 1 OS=Solanum lycopersicum OX=4081 GN=TFT1 PE=3 SV=2) HSP 1 Score: 334.7 bits (857), Expect = 8.5e-91 Identity = 176/204 (86.27%), Postives = 192/204 (94.12%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy Swiss-Prot
Match: P48349 (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana OX=3702 GN=GRF6 PE=1 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.4e-90 Identity = 170/199 (85.43%), Postives = 187/199 (93.97%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy TrEMBL
Match: A0A5A7VDF0 (14-3-3-like protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004070 PE=3 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 1.1e-104 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy TrEMBL
Match: A0A0A0LLU5 (14_3_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G372150 PE=3 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 1.1e-104 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy TrEMBL
Match: A0A6J1BQW4 (14-3-3 protein 10 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004908 PE=3 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.7e-102 Identity = 200/207 (96.62%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy TrEMBL
Match: A0A6J1K4L5 (14-3-3 protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111492243 PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.6e-100 Identity = 196/207 (94.69%), Postives = 203/207 (98.07%), Query Frame = 0
BLAST of Lsi08G010390 vs. ExPASy TrEMBL
Match: A0A6J1HFE8 (14-3-3-like protein GF14 kappa OS=Cucurbita moschata OX=3662 GN=LOC111462549 PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.6e-100 Identity = 196/207 (94.69%), Postives = 203/207 (98.07%), Query Frame = 0
BLAST of Lsi08G010390 vs. NCBI nr
Match: KAA0065077.1 (14-3-3-like protein B [Cucumis melo var. makuwa]) HSP 1 Score: 389.4 bits (999), Expect = 2.2e-104 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Lsi08G010390 vs. NCBI nr
Match: XP_004148413.1 (14-3-3 protein 10 [Cucumis sativus] >XP_038885153.1 14-3-3 protein 10 [Benincasa hispida] >KGN62768.1 hypothetical protein Csa_022528 [Cucumis sativus]) HSP 1 Score: 389.4 bits (999), Expect = 2.2e-104 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Lsi08G010390 vs. NCBI nr
Match: XP_022131869.1 (14-3-3 protein 10 isoform X1 [Momordica charantia] >XP_022131870.1 14-3-3 protein 10 isoform X2 [Momordica charantia]) HSP 1 Score: 382.1 bits (980), Expect = 3.5e-102 Identity = 200/207 (96.62%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Lsi08G010390 vs. NCBI nr
Match: XP_022997297.1 (14-3-3 protein 10 [Cucurbita maxima]) HSP 1 Score: 374.4 bits (960), Expect = 7.3e-100 Identity = 196/207 (94.69%), Postives = 203/207 (98.07%), Query Frame = 0
BLAST of Lsi08G010390 vs. NCBI nr
Match: XP_022961924.1 (14-3-3-like protein GF14 kappa [Cucurbita moschata] >XP_023546607.1 14-3-3-like protein GF14 kappa [Cucurbita pepo subsp. pepo] >KAG6598745.1 14-3-3 protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 374.4 bits (960), Expect = 7.3e-100 Identity = 196/207 (94.69%), Postives = 203/207 (98.07%), Query Frame = 0
BLAST of Lsi08G010390 vs. TAIR 10
Match: AT5G65430.1 (general regulatory factor 8 ) HSP 1 Score: 337.0 bits (863), Expect = 1.2e-92 Identity = 172/199 (86.43%), Postives = 190/199 (95.48%), Query Frame = 0
BLAST of Lsi08G010390 vs. TAIR 10
Match: AT5G65430.2 (general regulatory factor 8 ) HSP 1 Score: 337.0 bits (863), Expect = 1.2e-92 Identity = 172/199 (86.43%), Postives = 190/199 (95.48%), Query Frame = 0
BLAST of Lsi08G010390 vs. TAIR 10
Match: AT5G65430.3 (general regulatory factor 8 ) HSP 1 Score: 337.0 bits (863), Expect = 1.2e-92 Identity = 172/199 (86.43%), Postives = 190/199 (95.48%), Query Frame = 0
BLAST of Lsi08G010390 vs. TAIR 10
Match: AT5G10450.1 (G-box regulating factor 6 ) HSP 1 Score: 334.0 bits (855), Expect = 1.0e-91 Identity = 170/199 (85.43%), Postives = 187/199 (93.97%), Query Frame = 0
BLAST of Lsi08G010390 vs. TAIR 10
Match: AT5G10450.2 (G-box regulating factor 6 ) HSP 1 Score: 334.0 bits (855), Expect = 1.0e-91 Identity = 170/199 (85.43%), Postives = 187/199 (93.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|