Lsi08G009650 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAGAACAGAGTGGTTTCAAGCTCAGTGTCTAATCCGAGTTATGGAGGCTAACTCAGTGGCGAAACTCAGTTTGGTGGGGCTTAGCTATGGAGGGTTTGTTGGGTACAGCATAGCGGCGCTGCGGCCTGAAATGGTGGAGAAAGTAGTGATTTGTTGCTCTGGGGTTTGTGTGGAAGAGAAGGATTTTAAAGACGGGTTGTTGAAAGTCTCTGATTTGGAAGAAGCTACAGCCATTTTGGTGCCCCAAAAGCCAGAGAAGCTTAAACAGTTGGTGGGTTACTCGTTTTTCCGCCCGCCGCCGATGCGGTTGATGCCCTCTTGTCTGCTCAATGATTTCATTGAGGTATGGATGGAGGATTCAAACTTCTAACTTGTTAGTCGAGAATATATACCTAAACTAAGTTTTCCAACTTTTATATCTACACTACTTGCATTTCATACTTAACAATTTTTTACTACACACAATTCGACCTATAAACAAGGTTATGTTTGGTATGTGAATCTATTCATTCTTTTGTTAATTCCAGTGCACTATTAAGTTCATGACATCTACATTTGATATTACATATTAACTTCTTCAAATTATTAAGTTGCACAAATCCAGGTTGAATACAAACCCAAACATAAGCTAGTTTTATAAGTAACAAACTCATTTTGTGTTAATTTGACTAAACTTTGGGGTATGTGGTAGTCAATGTGTTTGGACCATATTGAAGAAAAGAGGGAGCTGATTCGAACTATTCCCAGAGGGAGAAAGCTTTCAGACCTTCCCAAGATTCACCAGGTTGGATTGCTATTCAATACAACTTATCCGCATTAGCTTTAAACAGTTCATTAACTACTTATCTTCATTGGCATTTCATGATTCTGTTTGATTGTTTGTTTTAAGTGAAATTGGGAAGGTTCAAAAAGTTGAGTCGTTTGTATACGGAAATAGCTCTCGAGCTTTAAAATTTGTATCAATTTGGTTCATAAACTTTCAAAAGTGTTAATAGTTCCACAATAAGTAACTTTAAAAATTGATCAACAGGCCCTTAAAATTCCAATTTCATGTCCAATTCTAAAATAGGTCTTCGAACTCTTTTTATTGTTTTTTTTTTACATACAACTGAAAGGTCCAAGGATTTATGAAACACAAATTAAAAAATTTATGAGCTATTAGACATCTCTAATTGCCACTTTTAAAAGTTTTCAAAAAATTTATGAGCTAACAGTGAGATATTAGACATCTCTAATTGCCACTTTTAAAAGTTTTCAAAGACTATACTTATAATTTAAACATTTGTCAACTTGCTCGCAGCGGACGATGATACTGTGGGGGGAACATGACCAAGTATTTCCAGTAGAATTGGGTTACAGATTGAAAAGGTGAGTAATACAACTCCTTAAAAGCAAACAATCGATCAAATATTCTCATTTAGAGGCAAATGATAAATGTGTTGGCCACTCCTTTGAAGTAGGCATTTGGGGGACAATGCTACGCTTGTAGTAATCAAGAATGCAGGCCATGCCTTCAACTCAGAGGAGCCAAAGGAGTTTCTCAACCATTTGATTTCTTTCCTGGTTGATTCATAGCCTCCCCCCATGACGTTTCGGCAGTTCAAATTCACAAACGACAACGTCAAGAAAAAGAAAATGAACAACACCAAAAGTTGGAGTGATCTAACGATTGGTTTTAGTACAACAAACAAGAGAAGAAACATACCTTGACCACATTAAACAATTAAATTTCTTATAGGAATTTTTTACATTTGCCATTTTGCCTCTTAATTCCAAGGACTTAAAACTCAGAAATCTTCAACCATAATATTTGTAATCCCAAAAATGTCCCTCAACTATCAGATTCCATGTGTAACTCTCTTGTACTATTCTACACCAGTGCTCTCTGTGCCATTGTTTACATCAAGTCTATTTTAATGTCTGGCAACAATTCCATCCGATGACTAATGGGACCAAAAAATAAAGCATAATATGAAATAGTAAAACCATGAATGAGCCTATTCTACTCC ACAGAACAGAGTGGTTTCAAGCTCAGTGTCTAATCCGAGTTATGGAGGCTAACTCAGTGGCGAAACTCAGTTTGGTGGGGCTTAGCTATGGAGGGTTTGTTGGGTACAGCATAGCGGCGCTGCGGCCTGAAATGGTGGAGAAAGTAGTGATTTGTTGCTCTGGGGTTTGTGTGGAAGAGAAGGATTTTAAAGACGGGTTGTTGAAAGTCTCTGATTTGGAAGAAGCTACAGCCATTTTGGTGCCCCAAAAGCCAGAGAAGCTTAAACAGTTGGTGGAAAAGAGGGAGCTGATTCGAACTATTCCCAGAGGGAGAAAGCTTTCAGACCTTCCCAAGATTCACCAGCGGACGATGATACTGTGGGGGGAACATGACCAAGTATTTCCAGTAGAATTGGGTTACAGATTGAAAAGTAGGCATTTGGGGGACAATGCTACGCTTGTAGTAATCAAGAATGCAGGCCATGCCTTCAACTCAGAGGAGCCAAAGGAGTTTCTCAACCATTTGATTTCTTTCCTGGTTGATTCATAGCCTCCCCCCATGACGTTTCGGCAGTTCAAATTCACAAACGACAACGTCAAGAAAAAGAAAATGAACAACACCAAAAGTTGGAGTGATCTAACGATTGGTTTTAGTACAACAAACAAGAGAAGAAACATACCTTGACCACATTAAACAATTAAATTTCTTATAGGAATTTTTTACATTTGCCATTTTGCCTCTTAATTCCAAGGACTTAAAACTCAGAAATCTTCAACCATAATATTTGTAATCCCAAAAATGTCCCTCAACTATCAGATTCCATGTGTAACTCTCTTGTACTATTCTACACCAGTGCTCTCTGTGCCATTGTTTACATCAAGTCTATTTTAATGTCTGGCAACAATTCCATCCGATGACTAATGGGACCAAAAAATAAAGCATAATATGAAATAGTAAAACCATGAATGAGCCTATTCTACTCC ATGGAGGCTAACTCAGTGGCGAAACTCAGTTTGGTGGGGCTTAGCTATGGAGGGTTTGTTGGGTACAGCATAGCGGCGCTGCGGCCTGAAATGGTGGAGAAAGTAGTGATTTGTTGCTCTGGGGTTTGTGTGGAAGAGAAGGATTTTAAAGACGGGTTGTTGAAAGTCTCTGATTTGGAAGAAGCTACAGCCATTTTGGTGCCCCAAAAGCCAGAGAAGCTTAAACAGTTGGTGGAAAAGAGGGAGCTGATTCGAACTATTCCCAGAGGGAGAAAGCTTTCAGACCTTCCCAAGATTCACCAGCGGACGATGATACTGTGGGGGGAACATGACCAAGTATTTCCAGTAGAATTGGGTTACAGATTGAAAAGTAGGCATTTGGGGGACAATGCTACGCTTGTAGTAATCAAGAATGCAGGCCATGCCTTCAACTCAGAGGAGCCAAAGGAGTTTCTCAACCATTTGATTTCTTTCCTGGTTGATTCATAG MEANSVAKLSLVGLSYGGFVGYSIAALRPEMVEKVVICCSGVCVEEKDFKDGLLKVSDLEEATAILVPQKPEKLKQLVEKRELIRTIPRGRKLSDLPKIHQRTMILWGEHDQVFPVELGYRLKSRHLGDNATLVVIKNAGHAFNSEEPKEFLNHLISFLVDS Homology
BLAST of Lsi08G009650 vs. ExPASy Swiss-Prot
Match: O05235 (Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) OX=224308 GN=yugF PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.7e-06 Identity = 45/189 (23.81%), Postives = 81/189 (42.86%), Query Frame = 0
BLAST of Lsi08G009650 vs. ExPASy TrEMBL
Match: A0A5A7VI51 (2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2, 4-dienoic acid hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004850 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 7.3e-73 Identity = 150/192 (78.12%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of Lsi08G009650 vs. ExPASy TrEMBL
Match: A0A1S3BC20 (LOW QUALITY PROTEIN: 2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoic acid hydrolase OS=Cucumis melo OX=3656 GN=LOC103488063 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 7.3e-73 Identity = 150/192 (78.12%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of Lsi08G009650 vs. ExPASy TrEMBL
Match: A0A0A0LLN7 (AB hydrolase-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G368940 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71 Identity = 148/192 (77.08%), Postives = 155/192 (80.73%), Query Frame = 0
BLAST of Lsi08G009650 vs. ExPASy TrEMBL
Match: A0A6J1HDR2 (uncharacterized protein LOC111462585 OS=Cucurbita moschata OX=3662 GN=LOC111462585 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.1e-71 Identity = 145/193 (75.13%), Postives = 157/193 (81.35%), Query Frame = 0
BLAST of Lsi08G009650 vs. ExPASy TrEMBL
Match: A0A6J1KAV5 (uncharacterized protein LOC111492191 OS=Cucurbita maxima OX=3661 GN=LOC111492191 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70 Identity = 144/193 (74.61%), Postives = 156/193 (80.83%), Query Frame = 0
BLAST of Lsi08G009650 vs. NCBI nr
Match: XP_038885546.1 (uncharacterized protein LOC120075885 [Benincasa hispida]) HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74 Identity = 153/193 (79.27%), Postives = 159/193 (82.38%), Query Frame = 0
BLAST of Lsi08G009650 vs. NCBI nr
Match: XP_031737138.1 (uncharacterized protein LOC101222914 isoform X1 [Cucumis sativus]) HSP 1 Score: 285.0 bits (728), Expect = 4.0e-73 Identity = 149/192 (77.60%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of Lsi08G009650 vs. NCBI nr
Match: XP_008444836.2 (PREDICTED: LOW QUALITY PROTEIN: 2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoic acid hydrolase [Cucumis melo]) HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72 Identity = 150/192 (78.12%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of Lsi08G009650 vs. NCBI nr
Match: KAA0065149.1 (2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoic acid hydrolase [Cucumis melo var. makuwa]) HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72 Identity = 150/192 (78.12%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of Lsi08G009650 vs. NCBI nr
Match: XP_004152639.1 (uncharacterized protein LOC101222914 isoform X2 [Cucumis sativus] >KGN62693.1 hypothetical protein Csa_022618 [Cucumis sativus]) HSP 1 Score: 278.9 bits (712), Expect = 2.8e-71 Identity = 148/192 (77.08%), Postives = 155/192 (80.73%), Query Frame = 0
BLAST of Lsi08G009650 vs. TAIR 10
Match: AT5G09430.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 210.7 bits (535), Expect = 8.8e-55 Identity = 105/191 (54.97%), Postives = 140/191 (73.30%), Query Frame = 0
BLAST of Lsi08G009650 vs. TAIR 10
Match: AT1G78210.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 190.7 bits (483), Expect = 9.5e-49 Identity = 98/194 (50.52%), Postives = 132/194 (68.04%), Query Frame = 0
BLAST of Lsi08G009650 vs. TAIR 10
Match: AT4G39955.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 159.5 bits (402), Expect = 2.3e-39 Identity = 85/189 (44.97%), Postives = 118/189 (62.43%), Query Frame = 0
BLAST of Lsi08G009650 vs. TAIR 10
Match: AT5G21950.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 92.4 bits (228), Expect = 3.5e-19 Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = 0
BLAST of Lsi08G009650 vs. TAIR 10
Match: AT1G17430.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 7.8e-19 Identity = 62/186 (33.33%), Postives = 93/186 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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