Lsi08G009640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G009640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Multifunctional methyltransferase subunit TRM112-like protein
Location	chr08: 18137588 .. 18137956 (-)
RNA-Seq Expression	Lsi08G009640
Synteny	Lsi08G009640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCTACTGACTCATAACATGCTCTCATCTAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATTGAGGTCGAGAAAGTCGTCGAGAAGCAGGTCGACTTCAATCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCTTCGTCGATGCCTCTCGGTCTATGGGCTATGCCGAGCTTCCCGAGGAGGCCGAGGCATCAATGCTAGACTCCCATGACTTTCTGCAACGATTCCACCATGCACTTCTGGAGTTGCATCTCGAGGAAGGCACTCTTATTTGCCCGGAGACTGGCCGGCGATTCCCTGTCAATAAAGGTATTCCCAATTTGCTTCTTCACGAAGACGAGGTCTGA

mRNA sequence

ATGAGGCTACTGACTCATAACATGCTCTCATCTAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATTGAGGTCGAGAAAGTCGTCGAGAAGCAGGTCGACTTCAATCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCTTCGTCGATGCCTCTCGGTCTATGGGCTATGCCGAGCTTCCCGAGGAGGCCGAGGCATCAATGCTAGACTCCCATGACTTTCTGCAACGATTCCACCATGCACTTCTGGAGTTGCATCTCGAGGAAGGCACTCTTATTTGCCCGGAGACTGGCCGGCGATTCCCTGTCAATAAAGGTATTCCCAATTTGCTTCTTCACGAAGACGAGGTCTGA

Coding sequence (CDS)

ATGAGGCTACTGACTCATAACATGCTCTCATCTAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATTGAGGTCGAGAAAGTCGTCGAGAAGCAGGTCGACTTCAATCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCTTCGTCGATGCCTCTCGGTCTATGGGCTATGCCGAGCTTCCCGAGGAGGCCGAGGCATCAATGCTAGACTCCCATGACTTTCTGCAACGATTCCACCATGCACTTCTGGAGTTGCATCTCGAGGAAGGCACTCTTATTTGCCCGGAGACTGGCCGGCGATTCCCTGTCAATAAAGGTATTCCCAATTTGCTTCTTCACGAAGACGAGGTCTGA

Protein sequence

MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHEDEV

Homology

[Close]

BLAST of Lsi08G009640 vs. ExPASy Swiss-Prot
Match: Q8LFJ5 (Multifunctional methyltransferase subunit TRM112 homolog A OS=Arabidopsis thaliana OX=3702 GN=TRM112A PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-48
Identity = 90/124 (72.58%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK  V+ +RSM
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLH 120
           GYAELPEE+ +A++L S + FL++ HHALLELHLEEG L+CPETGR+FPVNKGIPN+LLH
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EDEV 123
           EDEV
Sbjct: 121 EDEV 124

[Close]

BLAST of Lsi08G009640 vs. ExPASy Swiss-Prot
Match: Q9C9R3 (Multifunctional methyltransferase subunit TRM112 homolog B OS=Arabidopsis thaliana OX=3702 GN=TRM112B PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.7e-45
Identity = 87/124 (70.16%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK  VD +RSM
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLH 120
            Y ELP+ A + + L+S + FL++FHHALLELHLEEG+L+CPETGR+F V+KGIPN+LLH
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EDEV 123
           EDEV
Sbjct: 121 EDEV 124

[Close]

BLAST of Lsi08G009640 vs. ExPASy Swiss-Prot
Match: Q9DCG9 (Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX=10090 GN=Trmt112 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-28
Identity = 57/122 (46.72%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRS 60
           M+LLTHN+LSS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW   V A+ +
Sbjct: 1   MKLLTHNLLSSHVRGVGTRGFPLRLQATEVRINPVEFNPEFVARMIPKVEWAALVQAADT 60

Query: 61  MGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHE 120
           +  AE+P+E          FL++ HH LLE+ + EGTL CPE+GR FP+++GIPN+LL++
Sbjct: 61  LNLAEVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNMLLND 120

Query: 121 DE 122
           +E
Sbjct: 121 EE 122

[Close]

BLAST of Lsi08G009640 vs. ExPASy Swiss-Prot
Match: Q2KIA2 (Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus OX=9913 GN=TRMT112 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-27
Identity = 56/122 (45.90%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRS 60
           MRLLTHN+LSS+++GV   GFPLR++  +V    V+FNPDF+  M  K+EW   ++A+  
Sbjct: 1   MRLLTHNLLSSHVRGVGPRGFPLRLQATEVRINPVEFNPDFIVRMIPKVEWAALLEAADH 60

Query: 61  MGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHE 120
           +   ++P+E       + +FL++ HH LLE+ + EGTL CPE+GR FP+++GIPN+LL +
Sbjct: 61  LHLIQVPKEPIQGYEHNEEFLRKMHHVLLEVEVLEGTLQCPESGRVFPISRGIPNMLLSD 120

Query: 121 DE 122
           +E
Sbjct: 121 EE 122

[Close]

BLAST of Lsi08G009640 vs. ExPASy Swiss-Prot
Match: Q9UI30 (Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens OX=9606 GN=TRMT112 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.7e-27
Identity = 55/122 (45.08%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRS 60
           M+LLTHN+LSS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW  F++A+ +
Sbjct: 1   MKLLTHNLLSSHVRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADN 60

Query: 61  MGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHE 120
           +   ++P+       ++ +FL+  HH LLE+ + EGTL CPE+GR FP+++GIPN+LL E
Sbjct: 61  LRLIQVPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSE 120

Query: 121 DE 122
           +E
Sbjct: 121 EE 122

[Close]

BLAST of Lsi08G009640 vs. ExPASy TrEMBL
Match: A0A6J1JUC5 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucurbita maxima OX=3661 GN=LOC111487970 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRAM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAE+SMLDSHDFLQRFHHALLELHLEEG LICPET RRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. ExPASy TrEMBL
Match: A0A6J1JT67 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488115 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAE+S LDSHDFLQRFHHALLELHLEEG LICPETGRRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAESSKLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. ExPASy TrEMBL
Match: A0A6J1GQW1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucurbita moschata OX=3662 GN=LOC111456646 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRAM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAE+SMLDSHDFLQRFHHALLELHLEEG LICPET RRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. ExPASy TrEMBL
Match: A0A6J1GPK5 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455975 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.3e-61
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGVVNGFPLR+EVEKVVEKQVDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRVEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAE+ MLDSHDFLQRFHHALLELHLEEG LICPETGRRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAESLMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. ExPASy TrEMBL
Match: A0A1S3BBA0 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucumis melo OX=3656 GN=LOC103488061 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.3e-60
Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEA+ASMLDSHDFLQRFHHALLELHLEEG LICPET RRFPVNKGIPN+LLHED
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALICPETNRRFPVNKGIPNMLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. NCBI nr
Match: XP_023548932.1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 2.0e-61
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAE+SMLDSHDFLQRFHHALLELHLEEG LICPETGRRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. NCBI nr
Match: XP_038885364.1 (multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispida] >XP_038885365.1 multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispida] >XP_038885366.1 multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispida])

HSP 1 Score: 243.8 bits (621), Expect = 7.6e-61
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKG++NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGIINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEG LICPETGRRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. NCBI nr
Match: XP_022991525.1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 [Cucurbita maxima])

HSP 1 Score: 243.4 bits (620), Expect = 9.9e-61
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAE+S LDSHDFLQRFHHALLELHLEEG LICPETGRRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAESSKLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. NCBI nr
Match: XP_022954397.1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbita moschata] >XP_022991269.1 multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbita maxima] >KAG7014337.1 Multifunctional methyltransferase subunit TRM112-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.4 bits (620), Expect = 9.9e-61
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRAM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAE+SMLDSHDFLQRFHHALLELHLEEG LICPET RRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. NCBI nr
Match: XP_022953415.1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 [Cucurbita moschata])

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRLLTHNMLSSNIKGVVNGFPLR+EVEKVVEKQVDFNPDFLKNMFSKIEWKP VDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRVEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLHED 120
           GYAELPEEAE+ MLDSHDFLQRFHHALLELHLEEG LICPETGRRFPVNKGIPNLLLHED
Sbjct: 61  GYAELPEEAESLMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 EV 123
           EV
Sbjct: 121 EV 122

[Close]

BLAST of Lsi08G009640 vs. TAIR 10
Match: AT1G22270.1 (Trm112p-like protein )

HSP 1 Score: 192.6 bits (488), Expect = 1.9e-49
Identity = 90/124 (72.58%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK  V+ +RSM
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLH 120
           GYAELPEE+ +A++L S + FL++ HHALLELHLEEG L+CPETGR+FPVNKGIPN+LLH
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EDEV 123
           EDEV
Sbjct: 121 EDEV 124

[Close]

BLAST of Lsi08G009640 vs. TAIR 10
Match: AT1G78190.1 (Trm112p-like protein )

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-46
Identity = 87/124 (70.16%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPFVDASRSM 60
           MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK  VD +RSM
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGTLICPETGRRFPVNKGIPNLLLH 120
            Y ELP+ A + + L+S + FL++FHHALLELHLEEG+L+CPETGR+F V+KGIPN+LLH
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EDEV 123
           EDEV
Sbjct: 121 EDEV 124

The following BLAST results are available for this feature:

BLAST of Lsi08G009640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFJ5	2.6e-48	72.58	Multifunctional methyltransferase subunit TRM112 homolog A OS=Arabidopsis thalia...	[more]
Q9C9R3	4.7e-45	70.16	Multifunctional methyltransferase subunit TRM112 homolog B OS=Arabidopsis thalia...	[more]
Q9DCG9	2.3e-28	46.72	Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX...	[more]
Q2KIA2	2.0e-27	45.90	Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus OX=9...	[more]
Q9UI30	5.7e-27	45.08	Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens OX...	[more]

BLAST of Lsi08G009640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JUC5	4.8e-61	95.90	multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucur...	[more]
A0A6J1JT67	4.8e-61	95.90	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]
A0A6J1GQW1	4.8e-61	95.90	multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucur...	[more]
A0A6J1GPK5	6.3e-61	95.08	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]
A0A1S3BBA0	5.3e-60	93.44	multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucum...	[more]

BLAST of Lsi08G009640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548932.1	2.0e-61	96.72	multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbi...	[more]
XP_038885364.1	7.6e-61	95.08	multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispi...	[more]
XP_022991525.1	9.9e-61	95.90	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]
XP_022954397.1	9.9e-61	95.90	multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbi...	[more]
XP_022953415.1	1.3e-60	95.08	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]

BLAST of Lsi08G009640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22270.1	1.9e-49	72.58	Trm112p-like protein	[more]
AT1G78190.1	3.3e-46	70.16	Trm112p-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.20.25.10		coord: 1..122 e-value: 6.4E-40 score: 138.3
None	No IPR available	PANTHER	PTHR12773:SF5	BNAA09G30730D PROTEIN	coord: 1..122
None	No IPR available	SUPERFAMILY	158997	Trm112p-like	coord: 87..121
IPR005651	Trm112-like	PFAM	PF03966	Trm112p	coord: 3..111 e-value: 6.2E-15 score: 55.5
IPR039127	Multifunctional methyltransferase subunit Trm112	PANTHER	PTHR12773	UPF0315 PROTEIN-RELATED	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G009640.1	Lsi08G009640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018364	peptidyl-glutamine methylation
biological_process	GO:0070476	rRNA (guanine-N7)-methylation
biological_process	GO:0030488	tRNA methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0046982	protein heterodimerization activity