Lsi08G009390 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G009390
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr08: 17858456 .. 17860489 (-)
RNA-Seq ExpressionLsi08G009390
SyntenyLsi08G009390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTCTGGTAGATAGTTTTGTTTCCTCAAACAATGCTTCTCCTGCCCTTCCATCGTCTTCCAAGTTTAACTTCGACCTCCATCCCAGTTTCAGATTTTCTCGAAATTCCATGAATGTAGCTTGTAGGATGTATTTCACTGCGGTATCGGTCCATAATAGACCCCACGGTCAATTTTCTCCAATTGCTCAATGTATGGATCGTAATTATGGAGGTTTTAATGTCCCAACAACTCGTAGTTTCGCTTTGTTTAATCATAATGCCCAGGTTGTTAAATTAAATGCTCGTCGAGTTGATACTTTGTTTGGAAAGAAGATGGCGAAGTTGTATGCCAAGGATGTGAAGTGCGTGGATAGTGACCGTAAGCTGTTCGATGAAATTCCTGAGAGAACGCTGCCAGCCTATGCAGCTTTGATTAGGGCGTATTGTCGGTCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATTGATGGTTGATGAGAGCATACTACCTGATAAATACTTAGTGCCCACGATTCTTAAAGCATGTTCCAGAAGACAAATGGTGAAGACAGGAAAAATGGTTCATGGGTATGCCATTAGGAAGAGGTTGGTCTCTGATATTTTTATTGGGAATGCTCTTATGGATTTCTATGGTAATTGTGGGGATTTGAGATTTTCGATCAATGTTTTTGATTCAATGAGTGAAAAAGATGTGGTTTCATGGACTGCACTTGTTTCAGCCTACATTGAAGAAGGTCTTTTGGATGAGGCGATGGAAGTATTTCACTCCATGCAATCTAGTGGGTTGAAGCCTGATTTGATATCCTGGAATGCACTGGTCTCAGGGTTTGCTCGATATGGAGAGACTGACACTGCTCTCACATACTTGGAAGCCATGCAAGAAGAAGGATTGAGCCCAAGGGTTAATTCATGGAACGGAGTCATATCAGGTTTTGTTCAAAATGGCTATTTCAAAGATGCTTTGGACGTCTTTATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTTACTGTTGCGAGTATACTACCAGCTTGTGCAGGGTTGAAAGATCTAGGTTTAGGCAGGGCTATTCATGCATATGCTCTTAAGTGCGAGCTGTGTACGAACATTTATGTCGAAGGATCATTAGTTGATATGTATTCAAAATGCGGACAAGATGATTATGCTGAAGAAGTTTTTGCCAAAGCAGAGAAGAAAAACATTACATTGTGGAATGAAATTATTGCAACTCACGTGAATCAGGGAAAAACTAGCCAGGCGTTTGAACGTTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGACATGCGAAAAATGGGCAGAAAGTTGAAGCATTTAAGTTGCTATCTGAGATGTTACAGAAAGATTTGGCACCCAATGTTGTATCTTTAAATGTTTTACTATCTGGATTTCAACAATCTGGGTTAAGTTATGAAGCTCTGGAATTATTCCAGACCATGCTGTGCACTGGTTGCCTTCTTAATAAGGTGATTACTTTGCCGATCAGACCAAATACCATCACTATAACTGCTGCTCTGGCAGCTTGTGCTAGCTTGAGTTTATTGCACAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATGCTTTTGAAGACAACCACTTCATTTTGAGTGCTCTAATTGACATGTACACAAAGTGTGAGAGTATTGATTCGGCAATTCAAGTATTTAGCAGAATAAAGAACAGGAATGTAGTTTGTTGGAATGCCTTGATTGCAGGTCTAATGAGAATAATGCAGCACAAAGTGGCAGTTGAACTCTTCTGTCAAATGCTAGTAGAAGGCATAAAACCAAGTTCGGTTACCTTTTCGATACTTCTCCCTGCCTTAGCCGAGAGGTTAGATTTGAAAGCGAGAAGACAGCTACATTCCTATATCATCAAGAGTCAGCACCTTGAATCATGCAACGGCCTTGCAAATGTCTTAAGTTCAGAAAATTTTGATGGAGGAGTTTTGCTTCATGGAATATAA

mRNA sequence

ATGGCAACTCTGGTAGATAGTTTTGTTTCCTCAAACAATGCTTCTCCTGCCCTTCCATCGTCTTCCAAGTTTAACTTCGACCTCCATCCCAGTTTCAGATTTTCTCGAAATTCCATGAATGTAGCTTGTAGGATGTATTTCACTGCGGTATCGGTCCATAATAGACCCCACGGTCAATTTTCTCCAATTGCTCAATGTATGGATCGTAATTATGGAGGTTTTAATGTCCCAACAACTCGTAGTTTCGCTTTGTTTAATCATAATGCCCAGGTTGTTAAATTAAATGCTCGTCGAGTTGATACTTTGTTTGGAAAGAAGATGGCGAAGTTGTATGCCAAGGATGTGAAGTGCGTGGATAGTGACCGTAAGCTGTTCGATGAAATTCCTGAGAGAACGCTGCCAGCCTATGCAGCTTTGATTAGGGCGTATTGTCGGTCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATTGATGGTTGATGAGAGCATACTACCTGATAAATACTTAGTGCCCACGATTCTTAAAGCATGTTCCAGAAGACAAATGGTGAAGACAGGAAAAATGGTTCATGGGTATGCCATTAGGAAGAGGTTGGTCTCTGATATTTTTATTGGGAATGCTCTTATGGATTTCTATGGTAATTGTGGGGATTTGAGATTTTCGATCAATGTTTTTGATTCAATGAGTGAAAAAGATGTGGTTTCATGGACTGCACTTGTTTCAGCCTACATTGAAGAAGGTCTTTTGGATGAGGCGATGGAAGTATTTCACTCCATGCAATCTAGTGGGTTGAAGCCTGATTTGATATCCTGGAATGCACTGGTCTCAGGGTTTGCTCGATATGGAGAGACTGACACTGCTCTCACATACTTGGAAGCCATGCAAGAAGAAGGATTGAGCCCAAGGGTTAATTCATGGAACGGAGTCATATCAGGTTTTGTTCAAAATGGCTATTTCAAAGATGCTTTGGACGTCTTTATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTTACTGTTGCGAGTATACTACCAGCTTGTGCAGGGTTGAAAGATCTAGGTTTAGGCAGGGCTATTCATGCATATGCTCTTAAGTGCGAGCTGTGTACGAACATTTATGTCGAAGGATCATTAGTTGATATGTATTCAAAATGCGGACAAGATGATTATGCTGAAGAAGTTTTTGCCAAAGCAGAGAAGAAAAACATTACATTGTGGAATGAAATTATTGCAACTCACGTGAATCAGGGAAAAACTAGCCAGGCGTTTGAACGTTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGACATGCGAAAAATGGGCAGAAAGTTGAAGCATTTAAGTTGCTATCTGAGATGTTACAGAAAGATTTGGCACCCAATGTTGTATCTTTAAATGTTTTACTATCTGGATTTCAACAATCTGGGTTAAGTTATGAAGCTCTGGAATTATTCCAGACCATGCTGTGCACTGGTTGCCTTCTTAATAAGGTGATTACTTTGCCGATCAGACCAAATACCATCACTATAACTGCTGCTCTGGCAGCTTGTGCTAGCTTGAGTTTATTGCACAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATGCTTTTGAAGACAACCACTTCATTTTGAGTGCTCTAATTGACATGTACACAAAGTGTGAGAGTATTGATTCGGCAATTCAAGTATTTAGCAGAATAAAGAACAGGAATGTAGTTTGTTGGAATGCCTTGATTGCAGGTCTAATGAGAATAATGCAGCACAAAGTGGCAGTTGAACTCTTCTGTCAAATGCTAGTAGAAGGCATAAAACCAAGTTCGGTTACCTTTTCGATACTTCTCCCTGCCTTAGCCGAGAGGTTAGATTTGAAAGCGAGAAGACAGCTACATTCCTATATCATCAAGAGTCAGCACCTTGAATCATGCAACGGCCTTGCAAATGTCTTAAGTTCAGAAAATTTTGATGGAGGAGTTTTGCTTCATGGAATATAA

Coding sequence (CDS)

ATGGCAACTCTGGTAGATAGTTTTGTTTCCTCAAACAATGCTTCTCCTGCCCTTCCATCGTCTTCCAAGTTTAACTTCGACCTCCATCCCAGTTTCAGATTTTCTCGAAATTCCATGAATGTAGCTTGTAGGATGTATTTCACTGCGGTATCGGTCCATAATAGACCCCACGGTCAATTTTCTCCAATTGCTCAATGTATGGATCGTAATTATGGAGGTTTTAATGTCCCAACAACTCGTAGTTTCGCTTTGTTTAATCATAATGCCCAGGTTGTTAAATTAAATGCTCGTCGAGTTGATACTTTGTTTGGAAAGAAGATGGCGAAGTTGTATGCCAAGGATGTGAAGTGCGTGGATAGTGACCGTAAGCTGTTCGATGAAATTCCTGAGAGAACGCTGCCAGCCTATGCAGCTTTGATTAGGGCGTATTGTCGGTCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATTGATGGTTGATGAGAGCATACTACCTGATAAATACTTAGTGCCCACGATTCTTAAAGCATGTTCCAGAAGACAAATGGTGAAGACAGGAAAAATGGTTCATGGGTATGCCATTAGGAAGAGGTTGGTCTCTGATATTTTTATTGGGAATGCTCTTATGGATTTCTATGGTAATTGTGGGGATTTGAGATTTTCGATCAATGTTTTTGATTCAATGAGTGAAAAAGATGTGGTTTCATGGACTGCACTTGTTTCAGCCTACATTGAAGAAGGTCTTTTGGATGAGGCGATGGAAGTATTTCACTCCATGCAATCTAGTGGGTTGAAGCCTGATTTGATATCCTGGAATGCACTGGTCTCAGGGTTTGCTCGATATGGAGAGACTGACACTGCTCTCACATACTTGGAAGCCATGCAAGAAGAAGGATTGAGCCCAAGGGTTAATTCATGGAACGGAGTCATATCAGGTTTTGTTCAAAATGGCTATTTCAAAGATGCTTTGGACGTCTTTATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTTACTGTTGCGAGTATACTACCAGCTTGTGCAGGGTTGAAAGATCTAGGTTTAGGCAGGGCTATTCATGCATATGCTCTTAAGTGCGAGCTGTGTACGAACATTTATGTCGAAGGATCATTAGTTGATATGTATTCAAAATGCGGACAAGATGATTATGCTGAAGAAGTTTTTGCCAAAGCAGAGAAGAAAAACATTACATTGTGGAATGAAATTATTGCAACTCACGTGAATCAGGGAAAAACTAGCCAGGCGTTTGAACGTTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGACATGCGAAAAATGGGCAGAAAGTTGAAGCATTTAAGTTGCTATCTGAGATGTTACAGAAAGATTTGGCACCCAATGTTGTATCTTTAAATGTTTTACTATCTGGATTTCAACAATCTGGGTTAAGTTATGAAGCTCTGGAATTATTCCAGACCATGCTGTGCACTGGTTGCCTTCTTAATAAGGTGATTACTTTGCCGATCAGACCAAATACCATCACTATAACTGCTGCTCTGGCAGCTTGTGCTAGCTTGAGTTTATTGCACAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATGCTTTTGAAGACAACCACTTCATTTTGAGTGCTCTAATTGACATGTACACAAAGTGTGAGAGTATTGATTCGGCAATTCAAGTATTTAGCAGAATAAAGAACAGGAATGTAGTTTGTTGGAATGCCTTGATTGCAGGTCTAATGAGAATAATGCAGCACAAAGTGGCAGTTGAACTCTTCTGTCAAATGCTAGTAGAAGGCATAAAACCAAGTTCGGTTACCTTTTCGATACTTCTCCCTGCCTTAGCCGAGAGGTTAGATTTGAAAGCGAGAAGACAGCTACATTCCTATATCATCAAGAGTCAGCACCTTGAATCATGCAACGGCCTTGCAAATGTCTTAAGTTCAGAAAATTTTGATGGAGGAGTTTTGCTTCATGGAATATAA

Protein sequence

MATLVDSFVSSNNASPALPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQFSPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVDSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGLSPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRAIHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNVLLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIMQHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGLANVLSSENFDGGVLLHGI
Homology
BLAST of Lsi08G009390 vs. ExPASy Swiss-Prot
Match: Q9FXH1 (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.7e-96
Identity = 191/574 (33.28%), Postives = 323/574 (56.27%), Query Frame = 0

Query: 100 DTLFGKKMAKLYAKDVKCVDSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLM 159
           D     K+  +YAK   C+   RK+FD + ER L  ++A+I AY R  +W E+   FRLM
Sbjct: 114 DVFVETKLLSMYAK-CGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 173

Query: 160 VDESILPDKYLVPTILKACSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDL 219
           + + +LPD +L P IL+ C+    V+ GK++H   I+  + S + + N+++  Y  CG+L
Sbjct: 174 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 233

Query: 220 RFSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGF 279
            F+   F  M E+DV++W +++ AY + G  +EA+E+   M+  G+ P L++WN L+ G+
Sbjct: 234 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 293

Query: 280 ARYGETDTALTYLEAMQEEGLSPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNS 339
            + G+ D A+  ++ M+  G++  V +W  +ISG + NG    ALD+F  M L    PN+
Sbjct: 294 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 353

Query: 340 VTVASILPACAGLKDLGLGRAIHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAK 399
           VT+ S + AC+ LK +  G  +H+ A+K     ++ V  SLVDMYSKCG+ + A +VF  
Sbjct: 354 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 413

Query: 400 AEKKNITLWNEIIATHVNQGKTSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEA 459
            + K++  WN +I  +   G   +A+E F  MQ   L+P+++T+NT+++G+ KNG + EA
Sbjct: 414 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 473

Query: 460 FKLLSEMLQKD--LAPNVVSLNVLLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIR 519
             L   M +KD  +  N  + N++++G+ Q+G   EALELF+ M  +  +          
Sbjct: 474 MDLFQRM-EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM---------- 533

Query: 520 PNTITITAALAACASLSLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQV 579
           PN++TI + L ACA+L      +EIHG +LR   +  H + +AL D Y K   I+ +  +
Sbjct: 534 PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTI 593

Query: 580 FSRIKNRNVVCWNALIAGLMRIMQHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDL 639
           F  ++ ++++ WN+LI G +    +  A+ LF QM  +GI P+  T S ++ A     ++
Sbjct: 594 FLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNV 653

Query: 640 KARRQLHSYIIKSQH----LESCNGLANVLSSEN 668
              +++   I    H    LE C+ +  +    N
Sbjct: 654 DEGKKVFYSIANDYHIIPALEHCSAMVYLYGRAN 675

BLAST of Lsi08G009390 vs. ExPASy Swiss-Prot
Match: Q9SV26 (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H65 PE=3 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-74
Identity = 162/506 (32.02%), Postives = 266/506 (52.57%), Query Frame = 0

Query: 123 KLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSRRQ 182
           KLFDE+P+R   A+  ++    RS  W +    FR M           +  +L+ CS ++
Sbjct: 44  KLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKE 103

Query: 183 MVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTALVS 242
               G+ +HGY +R  L S++ + N+L+  Y   G L  S  VF+SM ++++ SW +++S
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163

Query: 243 AYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGLSP 302
           +Y + G +D+A+ +   M+  GLKPD+++WN+L+SG+A  G +  A+  L+ MQ  GL P
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223

Query: 303 RVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRAIH 362
             +S                                   ++S+L A A    L LG+AIH
Sbjct: 224 STSS-----------------------------------ISSLLQAVAEPGHLKLGKAIH 283

Query: 363 AYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTS 422
            Y L+ +L  ++YVE +L+DMY K G   YA  VF   + KNI  WN +++         
Sbjct: 284 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 343

Query: 423 QAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNVLL 482
            A      M+  G+KPD +T+N+L +G+A  G+  +A  ++ +M +K +APNVVS   + 
Sbjct: 344 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 403

Query: 483 SGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGKEI 542
           SG  ++G    AL++F  M   G          + PN  T++  L     LSLLH GKE+
Sbjct: 404 SGCSKNGNFRNALKVFIKMQEEG----------VGPNAATMSTLLKILGCLSLLHSGKEV 463

Query: 543 HGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIMQH 602
           HG+ LR     + ++ +AL+DMY K   + SAI++F  IKN+++  WN ++ G     + 
Sbjct: 464 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 504

Query: 603 KVAVELFCQMLVEGIKPSSVTFSILL 629
           +  +  F  ML  G++P ++TF+ +L
Sbjct: 524 EEGIAAFSVMLEAGMEPDAITFTSVL 504

BLAST of Lsi08G009390 vs. ExPASy Swiss-Prot
Match: Q9FM64 (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.4e-74
Identity = 169/583 (28.99%), Postives = 298/583 (51.11%), Query Frame = 0

Query: 106 KMAKLYAKDVKCVDSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESIL 165
           K+   YAK    ++    LF ++  R + ++AA+I   CR          F  M++  I 
Sbjct: 112 KLVIFYAK-CDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF 171

Query: 166 PDKYLVPTILKACSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINV 225
           PD ++VP + KAC   +  + G+ VHGY ++  L   +F+ ++L D YG CG L  +  V
Sbjct: 172 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 231

Query: 226 FDSMSEKDVVSWTALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYG-- 285
           FD + +++ V+W AL+  Y++ G  +EA+ +F  M+  G++P  ++ +  +S  A  G  
Sbjct: 232 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGV 291

Query: 286 ---------------ETDTAL--------------TYLEAMQEEGLSPRVNSWNGVISGF 345
                          E D  L               Y E + +      V +WN +ISG+
Sbjct: 292 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 351

Query: 346 VQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRAIHAYALKCELCTNI 405
           VQ G  +DA+ +   M L     + VT+A+++ A A  ++L LG+ +  Y ++    ++I
Sbjct: 352 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 411

Query: 406 YVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTSQAFERFRSMQHH 465
            +  +++DMY+KCG    A++VF    +K++ LWN ++A +   G + +A   F  MQ  
Sbjct: 412 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE 471

Query: 466 GLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNVLLSGFQQSGLSYEA 525
           G+ P+V+T+N ++    +NGQ  EA  +  +M    + PN++S   +++G  Q+G S EA
Sbjct: 472 GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 531

Query: 526 LELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGKEIHGYMLRNAFEDN 585
           +   + M  +G          +RPN  +IT AL+ACA L+ LH G+ IHGY++RN    +
Sbjct: 532 ILFLRKMQESG----------LRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 591

Query: 586 HF-ILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIMQHKVAVELFCQML 645
              I ++L+DMY KC  I+ A +VF       +   NA+I+        K A+ L+  + 
Sbjct: 592 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 651

Query: 646 VEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESC 657
             G+KP ++T + +L A     D+    ++ + I+  + ++ C
Sbjct: 652 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683

BLAST of Lsi08G009390 vs. ExPASy Swiss-Prot
Match: Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.5e-64
Identity = 190/661 (28.74%), Postives = 319/661 (48.26%), Query Frame = 0

Query: 19  PSSSKFNFDLHPSFRFSRN---SMNVACRMYFTAVSVHNRPHGQFSPI--AQC-MDRNYG 78
           PSS+ F+     SF F R    S ++  R+Y   +  H++ H +   I   QC + ++  
Sbjct: 9   PSSAMFD-----SFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRK 68

Query: 79  GFN-VPTTRSFALFNHNAQVVKLNARRVDT--LFGKKMAKLYAKDVKCVDSDRKLFDEIP 138
            F+ +P   + AL    A   K     +D+    G  +  LYAK  + V    K FD + 
Sbjct: 69  VFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQ-VSYAEKQFDFL- 128

Query: 139 ERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSRRQMVKTGKM 198
           E+ + A+ +++  Y    K  ++  +F  + +  I P+K+    +L  C+R   V+ G+ 
Sbjct: 129 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 188

Query: 199 VHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTALVSAYIEEGL 258
           +H   I+  L  + + G AL+D Y  C  +  +  VF+ + + + V WT L S Y++ GL
Sbjct: 189 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 248

Query: 259 LDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGLSPRVNSWNG 318
            +EA+ VF  M+  G +PD +++  +++ + R G+   A      M     SP V +WN 
Sbjct: 249 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNV 308

Query: 319 VISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRAIHAYALKCE 378
           +ISG  + G    A++ F NM          T+ S+L A   + +L LG  +HA A+K  
Sbjct: 309 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 368

Query: 379 LCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTSQAFERFR 438
           L +NIYV  SLV MYSKC + + A +VF   E+KN   WN +I  + + G++ +  E F 
Sbjct: 369 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 428

Query: 439 SMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNVLLSGFQQSG 498
            M+  G   D  T+ +LL+  A +       +  S +++K LA N+   N L+  + + G
Sbjct: 429 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 488

Query: 499 LSYEALELFQTMLCTG---------------------CLLNKVITLPIRPNTITITAALA 558
              +A ++F+ M                          L  ++    I  +   + + L 
Sbjct: 489 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 548

Query: 559 ACASLSLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVC 618
           AC  +  L++GK++H   ++   + +    S+LIDMY+KC  I  A +VFS +   +VV 
Sbjct: 549 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 608

Query: 619 WNALIAGLMRIMQHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYII 650
            NALIAG  +    + AV LF +ML  G+ PS +TF+ ++ A  +   L    Q H  I 
Sbjct: 609 MNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 657

BLAST of Lsi08G009390 vs. ExPASy Swiss-Prot
Match: O80647 (Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E33 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.0e-61
Identity = 168/597 (28.14%), Postives = 280/597 (46.90%), Query Frame = 0

Query: 119 DSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDE-SILPDKYLVPTILKA 178
           D  R +FD + +  +  + ++IR Y R+    E    F  M +E  I PDKY     LKA
Sbjct: 50  DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKA 109

Query: 179 CSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSW 238
           C+     K G  +H       L SD++IG AL++ Y    DL  +  VFD M  KDVV+W
Sbjct: 110 CAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTW 169

Query: 239 TALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTA--------- 298
             +VS   + G    A+ +FH M+S  +  D +S   L+   ++  ++D           
Sbjct: 170 NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK 229

Query: 299 --------------------LTYLEAMQEEGLSPRVNSWNGVISGFVQNGYFKDALDVFI 358
                               L   E++ EE      +SW  +++ +  NG+F++ L++F 
Sbjct: 230 KGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289

Query: 359 NMLLFPENPNSVTVASILPACAGLKDLGLGRAIHAYALKCELCTNIYVEGSLVDMYSKCG 418
            M  +    N V  AS L A A + DL  G AIH YA++  L  ++ V  SL+ MYSKCG
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349

Query: 419 QDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTSQAFERFRSMQHHGLKPDVVTYNTLLA 478
           + + AE++F   E +++  W+ +IA++   G+  +A   FR M    +KP+ VT  ++L 
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQ 409

Query: 479 G-----------------------------------HAKNGQKVEAFKLLSEMLQKDLAP 538
           G                                   +AK G+   A K    +  KD   
Sbjct: 410 GCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD--- 469

Query: 539 NVVSLNVLLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASL 598
             V+ N L  G+ Q G + +A ++++ M   G          + P++ T+   L  CA  
Sbjct: 470 -AVAFNALAQGYTQIGDANKAFDVYKNMKLHG----------VCPDSRTMVGMLQTCAFC 529

Query: 599 SLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIK-NRNVVCWNAL 650
           S   +G  ++G ++++ F+    +  ALI+M+TKC+++ +AI +F +    ++ V WN +
Sbjct: 530 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 589

BLAST of Lsi08G009390 vs. ExPASy TrEMBL
Match: A0A5A7VGH4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001190 PE=4 SV=1)

HSP 1 Score: 1144.8 bits (2960), Expect = 0.0e+00
Identity = 577/677 (85.23%), Postives = 618/677 (91.29%), Query Frame = 0

Query: 1   MATLVDSFVSSNNASPALPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQF 60
           MAT +D FVSSNNASP LPS  KF+FDL+P+  FSRNSMNVACRM+F AV   NRP+ QF
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  SPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVDS 120
           SPIA   D    G NVP   SF LFNHN+QVVKLNA RVD LFGKK+ K Y KDVKCVD 
Sbjct: 61  SPIAIRTDCE--GVNVPIPGSFVLFNHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSR 180
           D K+FDEIPER LP YAALIRAYCRSEKWNELFAAFR MVDE ILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERALPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKMVHGYAIRKR+VSDI IGNALMDFYGNC DL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGL 300
           VSAYIEEGLL+EAM+VFHSMQSSGLKPDLISWNALVSGFARYGET+TALTYLEAMQEEGL
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRA 360
            PRVNSWNGVISG VQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGL++LGLGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 IHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGK 420
           +HAYALKCELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIAT+VNQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 TSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNV 480
            SQA ERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEA++LLS+ML+++L PNV+SLNV
Sbjct: 421 NSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLNV 480

Query: 481 LLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGK 540
           L+SGFQ SGLSYEALEL QTMLCTG LLNKVI  P+ P+T+TITAALAACASL+LLHKGK
Sbjct: 481 LVSGFQNSGLSYEALELCQTMLCTGSLLNKVIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIM 600
           EIHGYMLRN FE+NHFI SALI+MY KCE+IDSAIQVFSRIKNRNVVCWNALIAGL+RIM
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGLA 660
           QH+VAVELFCQMLVEGIKPSS TFSILLPAL+ER DLK RRQLHSYIIKSQHLES N LA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSENFDGGVLLHGI 678
           NVLSS+NFD GVLLHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

BLAST of Lsi08G009390 vs. ExPASy TrEMBL
Match: A0A1S3BDB0 (pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=3656 GN=LOC103488425 PE=4 SV=1)

HSP 1 Score: 1143.3 bits (2956), Expect = 0.0e+00
Identity = 576/677 (85.08%), Postives = 618/677 (91.29%), Query Frame = 0

Query: 1   MATLVDSFVSSNNASPALPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQF 60
           MAT +D FVSSNNASP LPS  KF+FDL+P+  FSRNSMNVACRM+F AV   NRP+ QF
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  SPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVDS 120
           SPIA   D    G NVP   SF LF+HN+QVVKLNA RVD LFGKK+ K Y KDVKCVD 
Sbjct: 61  SPIAIRTDCE--GVNVPIPGSFVLFDHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSR 180
           D K+FDEIPERTLP YAALIRAYCRSEKWNELFAAFR MVDE ILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERTLPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKMVHGYAIRKR+VSDI IGNALMDFYGNC DL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGL 300
           VSAYIEEGLL+EAM+VFHSMQSSGLKPDLISWNALVSGFARYGET+TALTYLEAMQEEGL
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRA 360
            PRVNSWNGVISG VQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGL++LGLGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 IHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGK 420
           +HAYALKCELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIAT+VNQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 TSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNV 480
            SQA ERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEA++LLS+ML+++L PNV+SLNV
Sbjct: 421 NSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLNV 480

Query: 481 LLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGK 540
           L+SGFQ SGLSYEALEL QTMLCTG LLNK I  P+ P+T+TITAALAACASL+LLHKGK
Sbjct: 481 LVSGFQNSGLSYEALELCQTMLCTGSLLNKAIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIM 600
           EIHGYMLRN FE+NHFI SALI+MY KCE+IDSAIQVFSRIKNRNVVCWNALIAGL+RIM
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGLA 660
           QH+VAVELFCQMLVEGIKPSS TFSILLPAL+ER DLK RRQLHSYIIKSQHLES N LA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSENFDGGVLLHGI 678
           NVLSS+NFD GVLLHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

BLAST of Lsi08G009390 vs. ExPASy TrEMBL
Match: A0A0A0KFW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1)

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 577/677 (85.23%), Postives = 614/677 (90.69%), Query Frame = 0

Query: 1   MATLVDSFVSSNNASPALPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQF 60
           MAT V  F SSNNAS  LPS  KF+FDL+P+  FSRNSMNVACRM+F AVS HNRP+ QF
Sbjct: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60

Query: 61  SPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVDS 120
           SPIA   DRN  G NVP  RSFALF+H+AQVVKLN  RVD LFGKK+ K Y KDVKCVDS
Sbjct: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120

Query: 121 DRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSR 180
           D K+FDEIPERTLPAYAALIRAYCRSEKWNELFAAFR MVDE ILPDKYLVPTILKACSR
Sbjct: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180

Query: 181 RQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKM HGYAIRKR+VSDI I NALMDFYGNCGDL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGL 300
           VSAYIEEGLL+EAMEVFHSMQSSGLKPDLISWNALVSGFARYGET+TALTYLEAMQEEGL
Sbjct: 241 VSAYIEEGLLNEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRA 360
            PRVNSWNGVISG VQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGL+DLGLGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360

Query: 361 IHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGK 420
           +HAYALKCELCTNIYVEGSLVDMYSKCGQDD AEE+FAKAEKKNITLWNEIIAT++NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420

Query: 421 TSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNV 480
            S A E FRSMQHHGLKPDVVTYNTLLAG+AKNGQKVEA++LLS+MLQ++L PNV+SLNV
Sbjct: 421 NSWALEHFRSMQHHGLKPDVVTYNTLLAGYAKNGQKVEAYELLSDMLQENLVPNVISLNV 480

Query: 481 LLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGK 540
           L+SGFQQSGL+YEALEL QTMLCTG LLNK I  P+ PNT+T+TAALAACASL+LLHKGK
Sbjct: 481 LVSGFQQSGLNYEALELCQTMLCTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIM 600
           EIHGYMLRN F +N+FI SALI+MY KC  IDSAIQVFSRIKNRNVVCWNALIAGL+R M
Sbjct: 541 EIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600

Query: 601 QHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGLA 660
           QHK+AVELFCQMLVEGIKPSS TFSILLPAL+ER DLK RRQLHSYIIKSQHLES N LA
Sbjct: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSENFDGGVLLHGI 678
           NVLSS+N D GVLLHGI
Sbjct: 661 NVLSSDNVDVGVLLHGI 677

BLAST of Lsi08G009390 vs. ExPASy TrEMBL
Match: A0A6J1BQ73 (pentatricopeptide repeat-containing protein At1g19720-like OS=Momordica charantia OX=3673 GN=LOC111004749 PE=4 SV=1)

HSP 1 Score: 1073.2 bits (2774), Expect = 5.0e-310
Identity = 547/679 (80.56%), Postives = 586/679 (86.30%), Query Frame = 0

Query: 1   MATLVDSFVSSNNASPAL--PSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHG 60
           MATL D+F+S NNASP L  PSSSK NFDLHPS  FSRNSMN+ CRM+FTAVS HN P G
Sbjct: 1   MATLKDAFLSPNNASPVLPYPSSSKLNFDLHPSLGFSRNSMNLNCRMHFTAVSAHNPPRG 60

Query: 61  QFSPIAQCMDRNYGGFNVPTTRSFALFNHN---------AQVVKLNARRVDTLFGKKMAK 120
           QF P A+ +DRN  G N+P  RS  L N N         A VVK N  RVD+LFG K+ K
Sbjct: 61  QFVPAAKSIDRNDVGSNIPIARSLVLLNSNFLSDSRQTRAHVVKSNVHRVDSLFGNKLPK 120

Query: 121 LYAKDVKCVDSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKY 180
             A+DVKCVDSD KLFDEIPERTLPAYAALIRAYCRS+KWNELFAAFR MVDE I PDKY
Sbjct: 121 FNAQDVKCVDSDCKLFDEIPERTLPAYAALIRAYCRSQKWNELFAAFRSMVDEGIQPDKY 180

Query: 181 LVPTILKACSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSM 240
           LVPTILKACS RQ+VKTGKMVHG+ IRK  VSDIF+GNALM+FYGNCGDLR SI VFDSM
Sbjct: 181 LVPTILKACSGRQLVKTGKMVHGFVIRKTFVSDIFVGNALMNFYGNCGDLRSSIVVFDSM 240

Query: 241 SEKDVVSWTALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTAL 300
           SEKDVVSWTALVSAY+EEGLLDEAMEVFH+MQSSGLKPDLISWNALVSGFARYGE D AL
Sbjct: 241 SEKDVVSWTALVSAYMEEGLLDEAMEVFHNMQSSGLKPDLISWNALVSGFARYGEIDIAL 300

Query: 301 TYLEAMQEEGLSPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPAC 360
            YLE MQE+GL+PRVNSWNG+ISG VQNGYF+DALDVFINML FPENPNSVTVASILPAC
Sbjct: 301 QYLEEMQEKGLTPRVNSWNGIISGCVQNGYFRDALDVFINMLFFPENPNSVTVASILPAC 360

Query: 361 AGLKDLGLGRAIHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWN 420
           AGL+D+GLGRAIHAYALK ELC N+YVEGSLVDMYSKCGQD  AE+VFA+AEKKNITLWN
Sbjct: 361 AGLRDIGLGRAIHAYALKSELCVNLYVEGSLVDMYSKCGQDYCAEKVFARAEKKNITLWN 420

Query: 421 EIIATHVNQGKTSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQK 480
           EIIA +VNQGK SQA ERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEA+KLLSEMLQK
Sbjct: 421 EIIAAYVNQGKVSQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQK 480

Query: 481 DLAPNVVSLNVLLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAA 540
           DL PNVVSLNVL+SGFQQ GLSYEAL+LF+TMLCTGCLLNKVITLPIRPNT+TITAALAA
Sbjct: 481 DLTPNVVSLNVLVSGFQQFGLSYEALKLFRTMLCTGCLLNKVITLPIRPNTVTITAALAA 540

Query: 541 CASLSLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCW 600
           CA L+L H+GKEIHGYMLRN F DNHFI SALID Y KCE IDSAI+VF RIKNRNVVCW
Sbjct: 541 CADLNLSHQGKEIHGYMLRNGFHDNHFISSALIDTYIKCEDIDSAIRVFRRIKNRNVVCW 600

Query: 601 NALIAGLMRIMQHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIK 660
           NALIAG M+  Q KVA+ELFC+MLVEGIKPSSVT SIL PAL   +DLK RRQLHSYI K
Sbjct: 601 NALIAGHMKERQPKVAIELFCEMLVEGIKPSSVTLSILPPALDLGVDLKVRRQLHSYITK 660

Query: 661 SQHLESCNGLANVLSSENF 669
           SQ LE CN LANV S   F
Sbjct: 661 SQLLEWCNDLANVSSFGKF 679

BLAST of Lsi08G009390 vs. ExPASy TrEMBL
Match: A0A6J1K3Z4 (pentatricopeptide repeat-containing protein At1g19720-like OS=Cucurbita maxima OX=3661 GN=LOC111492109 PE=4 SV=1)

HSP 1 Score: 1057.4 bits (2733), Expect = 2.6e-305
Identity = 532/639 (83.26%), Postives = 574/639 (89.83%), Query Frame = 0

Query: 39  MNVACRMYFTAVSVHNRPHGQFSPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARR 98
           MNVACRM+ TA+S HNR   +F+P+A+C D N  G NVP  RSFALFN N Q VKLNARR
Sbjct: 1   MNVACRMHSTAISAHNRSQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQFVKLNARR 60

Query: 99  VDTLFGKKMAKLYAKDVKCVDSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRL 158
           VD+L G K+AK+ AK   CVDSDRK+FDE+PER LPAY ALIRAYCRSEKWNELFAAF  
Sbjct: 61  VDSLIGNKLAKVCAKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 120

Query: 159 MVDESILPDKYLVPTILKACSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGD 218
           MV+E ILPDKYLVPTILKACS+ Q VKTGKM+HGYAIRKRLVSDIFIGNALMDFYGNCGD
Sbjct: 121 MVEEGILPDKYLVPTILKACSKIQAVKTGKMIHGYAIRKRLVSDIFIGNALMDFYGNCGD 180

Query: 219 LRFSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSG 278
           LRFSINVFDSMSEKDVVSWTALVSAY+EEGLLDEAME FHSMQSSGLKPDLISWNALVSG
Sbjct: 181 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGLKPDLISWNALVSG 240

Query: 279 FARYGETDTALTYLEAMQEEGLSPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPN 338
           FAR+G+  TAL YLEAMQE+GLSPRVNSWNGVISG V NGYFKDAL VFINMLLFPENPN
Sbjct: 241 FARHGKIGTALKYLEAMQEQGLSPRVNSWNGVISGCVLNGYFKDALYVFINMLLFPENPN 300

Query: 339 SVTVASILPACAGLKDLGLGRAIHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFA 398
           SVTVAS+LPACAGL+ LGLGRA+HAYALKCELCTNIYVEGSLV+MYSKCGQDDYAEE+FA
Sbjct: 301 SVTVASVLPACAGLRYLGLGRAVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 360

Query: 399 KAEKKNITLWNEIIATHVNQGKTSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVE 458
           KAEKKNITLWNEIIAT+VNQG+TSQA ERFRSMQHHGL+PDVVTYNTLLAG+AKNGQKVE
Sbjct: 361 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRPDVVTYNTLLAGYAKNGQKVE 420

Query: 459 AFKLLSEMLQKDLAPNVVSLNVLLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRP 518
           A+ LL+EMLQKDLAPNVVSLN L+SGFQQSGLSYEALELFQTML T CL++KVIT PIRP
Sbjct: 421 AYNLLTEMLQKDLAPNVVSLNALVSGFQQSGLSYEALELFQTMLYTACLVDKVITSPIRP 480

Query: 519 N-TITITAALAACASLSLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQV 578
           N  ITITAALAACASL+LLHKGKEIHGYMLRN FEDNH + SALIDMY+KCE IDS IQV
Sbjct: 481 NIVITITAALAACASLNLLHKGKEIHGYMLRNGFEDNHIVSSALIDMYSKCECIDSVIQV 540

Query: 579 FSRIKNRNVVCWNALIAGLMRIMQHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDL 638
           F  IKNRN VCWNALIAG  R+MQ K+AVELFCQMLVEGIKPSS +FSILLPALA R DL
Sbjct: 541 FGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDSFSILLPALA-RTDL 600

Query: 639 KARRQLHSYIIKSQHLESCNGLANVLSSENFDGGVLLHG 677
             RRQLHSYIIKSQ +ESC+ L+ VLSS  FDGGV+LHG
Sbjct: 601 IMRRQLHSYIIKSQLVESCDDLSYVLSSNEFDGGVMLHG 638

BLAST of Lsi08G009390 vs. NCBI nr
Match: XP_038884429.1 (pentatricopeptide repeat-containing protein At1g19720-like [Benincasa hispida])

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 606/675 (89.78%), Postives = 633/675 (93.78%), Query Frame = 0

Query: 3   TLVDSFVSSNNASPALPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQFSP 62
           T +D FVSS+NASPALPSS KFNFDL PSFR SRNSM VACRM+FTA+S H+RP GQFSP
Sbjct: 6   TYIDGFVSSSNASPALPSSFKFNFDLQPSFRLSRNSMYVACRMHFTAISAHDRPQGQFSP 65

Query: 63  IAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVDSDR 122
           IA+C DRNYGGF VP  RSF LFNHNAQVVKLNA RVD LFGKK+A  YAKDV CVDSD 
Sbjct: 66  IAKCTDRNYGGFKVPIARSFGLFNHNAQVVKLNACRVDNLFGKKLATFYAKDVNCVDSDS 125

Query: 123 KLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSRRQ 182
           KLFDEIPERTL AY+ALIRAYCRSEKWNELFAAFR MVDE ILP KYLVPTILKACSRRQ
Sbjct: 126 KLFDEIPERTLSAYSALIRAYCRSEKWNELFAAFRSMVDEGILPGKYLVPTILKACSRRQ 185

Query: 183 MVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTALVS 242
           MVKTGKMVHGYAIRKRLVSDIFIGNAL+D YGNCGDLRFSINVFDSMSEKDVVSWTALVS
Sbjct: 186 MVKTGKMVHGYAIRKRLVSDIFIGNALIDLYGNCGDLRFSINVFDSMSEKDVVSWTALVS 245

Query: 243 AYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGLSP 302
           AYIEEGLLDE MEVFHSMQSSGLKPDLISWNALVSGFARYGET+TALTYLEAMQEEGLSP
Sbjct: 246 AYIEEGLLDEVMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGLSP 305

Query: 303 RVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRAIH 362
           RVNSWNGVISGFVQNGYFKDALDVFINMLLF ENPNSVTVASILPACAGL+DLGLGRAIH
Sbjct: 306 RVNSWNGVISGFVQNGYFKDALDVFINMLLFAENPNSVTVASILPACAGLRDLGLGRAIH 365

Query: 363 AYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTS 422
           AYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIAT+VNQ KTS
Sbjct: 366 AYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQEKTS 425

Query: 423 QAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNVLL 482
           QA E FRS+QHHGLKPDVVTYNTLLAGHAKNGQKVEA+KLLSEMLQKDLAPNVVSLNVL+
Sbjct: 426 QALECFRSLQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQKDLAPNVVSLNVLV 485

Query: 483 SGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGKEI 542
           SGFQQSGLSYEALELFQTMLC GCL NK+IT PIRP+T+TITAAL ACASL+LLHKGKEI
Sbjct: 486 SGFQQSGLSYEALELFQTMLCKGCLHNKMITFPIRPDTVTITAALVACASLNLLHKGKEI 545

Query: 543 HGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIMQH 602
           HGYM RN+FEDNHFI SALIDMY KCE+ID AIQVF  IKNRNVVCWNALIAGLMRIMQ 
Sbjct: 546 HGYMFRNSFEDNHFISSALIDMYAKCENIDLAIQVFRSIKNRNVVCWNALIAGLMRIMQP 605

Query: 603 KVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGLANV 662
           K+AVELFCQMLVEG+KPSSVTFSILLPALAE+ DLKARRQLHSYIIKS++LESCN LANV
Sbjct: 606 KMAVELFCQMLVEGLKPSSVTFSILLPALAEKADLKARRQLHSYIIKSRYLESCNDLANV 665

Query: 663 LSSENFDGGVLLHGI 678
           LSS+NFDGGVLLHGI
Sbjct: 666 LSSDNFDGGVLLHGI 680

BLAST of Lsi08G009390 vs. NCBI nr
Match: KAA0064811.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1144.8 bits (2960), Expect = 0.0e+00
Identity = 577/677 (85.23%), Postives = 618/677 (91.29%), Query Frame = 0

Query: 1   MATLVDSFVSSNNASPALPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQF 60
           MAT +D FVSSNNASP LPS  KF+FDL+P+  FSRNSMNVACRM+F AV   NRP+ QF
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  SPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVDS 120
           SPIA   D    G NVP   SF LFNHN+QVVKLNA RVD LFGKK+ K Y KDVKCVD 
Sbjct: 61  SPIAIRTDCE--GVNVPIPGSFVLFNHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSR 180
           D K+FDEIPER LP YAALIRAYCRSEKWNELFAAFR MVDE ILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERALPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKMVHGYAIRKR+VSDI IGNALMDFYGNC DL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGL 300
           VSAYIEEGLL+EAM+VFHSMQSSGLKPDLISWNALVSGFARYGET+TALTYLEAMQEEGL
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRA 360
            PRVNSWNGVISG VQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGL++LGLGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 IHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGK 420
           +HAYALKCELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIAT+VNQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 TSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNV 480
            SQA ERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEA++LLS+ML+++L PNV+SLNV
Sbjct: 421 NSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLNV 480

Query: 481 LLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGK 540
           L+SGFQ SGLSYEALEL QTMLCTG LLNKVI  P+ P+T+TITAALAACASL+LLHKGK
Sbjct: 481 LVSGFQNSGLSYEALELCQTMLCTGSLLNKVIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIM 600
           EIHGYMLRN FE+NHFI SALI+MY KCE+IDSAIQVFSRIKNRNVVCWNALIAGL+RIM
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGLA 660
           QH+VAVELFCQMLVEGIKPSS TFSILLPAL+ER DLK RRQLHSYIIKSQHLES N LA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSENFDGGVLLHGI 678
           NVLSS+NFD GVLLHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

BLAST of Lsi08G009390 vs. NCBI nr
Match: XP_008445371.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis melo])

HSP 1 Score: 1143.3 bits (2956), Expect = 0.0e+00
Identity = 576/677 (85.08%), Postives = 618/677 (91.29%), Query Frame = 0

Query: 1   MATLVDSFVSSNNASPALPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQF 60
           MAT +D FVSSNNASP LPS  KF+FDL+P+  FSRNSMNVACRM+F AV   NRP+ QF
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  SPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVDS 120
           SPIA   D    G NVP   SF LF+HN+QVVKLNA RVD LFGKK+ K Y KDVKCVD 
Sbjct: 61  SPIAIRTDCE--GVNVPIPGSFVLFDHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSR 180
           D K+FDEIPERTLP YAALIRAYCRSEKWNELFAAFR MVDE ILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERTLPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKMVHGYAIRKR+VSDI IGNALMDFYGNC DL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGL 300
           VSAYIEEGLL+EAM+VFHSMQSSGLKPDLISWNALVSGFARYGET+TALTYLEAMQEEGL
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRA 360
            PRVNSWNGVISG VQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGL++LGLGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 IHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGK 420
           +HAYALKCELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIAT+VNQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 TSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNV 480
            SQA ERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEA++LLS+ML+++L PNV+SLNV
Sbjct: 421 NSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLNV 480

Query: 481 LLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGK 540
           L+SGFQ SGLSYEALEL QTMLCTG LLNK I  P+ P+T+TITAALAACASL+LLHKGK
Sbjct: 481 LVSGFQNSGLSYEALELCQTMLCTGSLLNKAIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIM 600
           EIHGYMLRN FE+NHFI SALI+MY KCE+IDSAIQVFSRIKNRNVVCWNALIAGL+RIM
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGLA 660
           QH+VAVELFCQMLVEGIKPSS TFSILLPAL+ER DLK RRQLHSYIIKSQHLES N LA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSENFDGGVLLHGI 678
           NVLSS+NFD GVLLHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

BLAST of Lsi08G009390 vs. NCBI nr
Match: XP_004146805.1 (pentatricopeptide repeat-containing protein At1g19720 [Cucumis sativus] >KGN47749.1 hypothetical protein Csa_003552 [Cucumis sativus])

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 577/677 (85.23%), Postives = 614/677 (90.69%), Query Frame = 0

Query: 1   MATLVDSFVSSNNASPALPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQF 60
           MAT V  F SSNNAS  LPS  KF+FDL+P+  FSRNSMNVACRM+F AVS HNRP+ QF
Sbjct: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60

Query: 61  SPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVDS 120
           SPIA   DRN  G NVP  RSFALF+H+AQVVKLN  RVD LFGKK+ K Y KDVKCVDS
Sbjct: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120

Query: 121 DRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSR 180
           D K+FDEIPERTLPAYAALIRAYCRSEKWNELFAAFR MVDE ILPDKYLVPTILKACSR
Sbjct: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180

Query: 181 RQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKM HGYAIRKR+VSDI I NALMDFYGNCGDL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGL 300
           VSAYIEEGLL+EAMEVFHSMQSSGLKPDLISWNALVSGFARYGET+TALTYLEAMQEEGL
Sbjct: 241 VSAYIEEGLLNEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRA 360
            PRVNSWNGVISG VQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGL+DLGLGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360

Query: 361 IHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGK 420
           +HAYALKCELCTNIYVEGSLVDMYSKCGQDD AEE+FAKAEKKNITLWNEIIAT++NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420

Query: 421 TSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNV 480
            S A E FRSMQHHGLKPDVVTYNTLLAG+AKNGQKVEA++LLS+MLQ++L PNV+SLNV
Sbjct: 421 NSWALEHFRSMQHHGLKPDVVTYNTLLAGYAKNGQKVEAYELLSDMLQENLVPNVISLNV 480

Query: 481 LLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGK 540
           L+SGFQQSGL+YEALEL QTMLCTG LLNK I  P+ PNT+T+TAALAACASL+LLHKGK
Sbjct: 481 LVSGFQQSGLNYEALELCQTMLCTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIM 600
           EIHGYMLRN F +N+FI SALI+MY KC  IDSAIQVFSRIKNRNVVCWNALIAGL+R M
Sbjct: 541 EIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600

Query: 601 QHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGLA 660
           QHK+AVELFCQMLVEGIKPSS TFSILLPAL+ER DLK RRQLHSYIIKSQHLES N LA
Sbjct: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSENFDGGVLLHGI 678
           NVLSS+N D GVLLHGI
Sbjct: 661 NVLSSDNVDVGVLLHGI 677

BLAST of Lsi08G009390 vs. NCBI nr
Match: KAG6598662.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1114.0 bits (2880), Expect = 0.0e+00
Identity = 562/677 (83.01%), Postives = 606/677 (89.51%), Query Frame = 0

Query: 1   MATLVDSFVSSNNASPA-LPSSSKFNFDLHPSFRFSRNSMNVACRMYFTAVSVHNRPHGQ 60
           MATLVD F+SSNN SPA LPSSSK N DL+PSFRFSRNSMNVACRM+ TA+S HNRP  +
Sbjct: 1   MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60

Query: 61  FSPIAQCMDRNYGGFNVPTTRSFALFNHNAQVVKLNARRVDTLFGKKMAKLYAKDVKCVD 120
           F+P+A+C D N  G NVP  RSFALFN N Q VKLNARRVD+L G  +AK   K   CVD
Sbjct: 61  FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120

Query: 121 SDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACS 180
           SDRK+FDE+PER LPAY ALIRAYCRSEKWNELFAAF  MV+E ILPDKYLVPTILKACS
Sbjct: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180

Query: 181 RRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240
            RQ VKTGKM+HGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA
Sbjct: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240

Query: 241 LVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEG 300
           LVSAY+EEGLLDEAME FHSMQSSGLKPDLISWNALVSGFAR+G+  TAL YLEAMQE+G
Sbjct: 241 LVSAYMEEGLLDEAMEAFHSMQSSGLKPDLISWNALVSGFARHGKIGTALKYLEAMQEQG 300

Query: 301 LSPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGR 360
           LSPRVNSWNGVISG V NG+FKDAL VFINMLLFPENPNSVTVAS+LPACAGL+ LGLGR
Sbjct: 301 LSPRVNSWNGVISGCVLNGFFKDALYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360

Query: 361 AIHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQG 420
           A+HAYALKCELCTNIYVEGSLV+MYSKCGQDDYAEE+FAKAEKKNITLWNEIIAT+VNQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420

Query: 421 KTSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLN 480
           +TSQA ERFRSMQHHGL+PDVVTYNTLLAG+AKNGQKVEA+ LL+EMLQKDLAPNVVSLN
Sbjct: 421 RTSQALERFRSMQHHGLRPDVVTYNTLLAGYAKNGQKVEAYNLLTEMLQKDLAPNVVSLN 480

Query: 481 VLLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKG 540
           VL+SGFQQSGLSYEALELFQTML T CL++KVIT PIRPN +TITA LAACASL+LLHKG
Sbjct: 481 VLVSGFQQSGLSYEALELFQTMLYTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540

Query: 541 KEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRI 600
           KEIHGYMLRN FED+H + SALIDMY+KC+ IDS I+VF  IKNRN VCWNALIAG  R+
Sbjct: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600

Query: 601 MQHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESCNGL 660
           MQ K+AVELFCQMLVEGIKPSS TFSIL PALA R DL  RRQLHSYIIKSQ +ESC+ L
Sbjct: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVESCDDL 660

Query: 661 ANVLSSENFDGGVLLHG 677
           ANVLSS  FDGGVLLHG
Sbjct: 661 ANVLSSNEFDGGVLLHG 676

BLAST of Lsi08G009390 vs. TAIR 10
Match: AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 355.1 bits (910), Expect = 1.2e-97
Identity = 191/574 (33.28%), Postives = 323/574 (56.27%), Query Frame = 0

Query: 100 DTLFGKKMAKLYAKDVKCVDSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLM 159
           D     K+  +YAK   C+   RK+FD + ER L  ++A+I AY R  +W E+   FRLM
Sbjct: 114 DVFVETKLLSMYAK-CGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 173

Query: 160 VDESILPDKYLVPTILKACSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDL 219
           + + +LPD +L P IL+ C+    V+ GK++H   I+  + S + + N+++  Y  CG+L
Sbjct: 174 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 233

Query: 220 RFSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGF 279
            F+   F  M E+DV++W +++ AY + G  +EA+E+   M+  G+ P L++WN L+ G+
Sbjct: 234 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 293

Query: 280 ARYGETDTALTYLEAMQEEGLSPRVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNS 339
            + G+ D A+  ++ M+  G++  V +W  +ISG + NG    ALD+F  M L    PN+
Sbjct: 294 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 353

Query: 340 VTVASILPACAGLKDLGLGRAIHAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAK 399
           VT+ S + AC+ LK +  G  +H+ A+K     ++ V  SLVDMYSKCG+ + A +VF  
Sbjct: 354 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 413

Query: 400 AEKKNITLWNEIIATHVNQGKTSQAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEA 459
            + K++  WN +I  +   G   +A+E F  MQ   L+P+++T+NT+++G+ KNG + EA
Sbjct: 414 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 473

Query: 460 FKLLSEMLQKD--LAPNVVSLNVLLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIR 519
             L   M +KD  +  N  + N++++G+ Q+G   EALELF+ M  +  +          
Sbjct: 474 MDLFQRM-EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM---------- 533

Query: 520 PNTITITAALAACASLSLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQV 579
           PN++TI + L ACA+L      +EIHG +LR   +  H + +AL D Y K   I+ +  +
Sbjct: 534 PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTI 593

Query: 580 FSRIKNRNVVCWNALIAGLMRIMQHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDL 639
           F  ++ ++++ WN+LI G +    +  A+ LF QM  +GI P+  T S ++ A     ++
Sbjct: 594 FLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNV 653

Query: 640 KARRQLHSYIIKSQH----LESCNGLANVLSSEN 668
              +++   I    H    LE C+ +  +    N
Sbjct: 654 DEGKKVFYSIANDYHIIPALEHCSAMVYLYGRAN 675

BLAST of Lsi08G009390 vs. TAIR 10
Match: AT4G01030.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 282.7 bits (722), Expect = 7.6e-76
Identity = 162/506 (32.02%), Postives = 266/506 (52.57%), Query Frame = 0

Query: 123 KLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSRRQ 182
           KLFDE+P+R   A+  ++    RS  W +    FR M           +  +L+ CS ++
Sbjct: 44  KLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKE 103

Query: 183 MVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTALVS 242
               G+ +HGY +R  L S++ + N+L+  Y   G L  S  VF+SM ++++ SW +++S
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163

Query: 243 AYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGLSP 302
           +Y + G +D+A+ +   M+  GLKPD+++WN+L+SG+A  G +  A+  L+ MQ  GL P
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223

Query: 303 RVNSWNGVISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRAIH 362
             +S                                   ++S+L A A    L LG+AIH
Sbjct: 224 STSS-----------------------------------ISSLLQAVAEPGHLKLGKAIH 283

Query: 363 AYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTS 422
            Y L+ +L  ++YVE +L+DMY K G   YA  VF   + KNI  WN +++         
Sbjct: 284 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 343

Query: 423 QAFERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNVLL 482
            A      M+  G+KPD +T+N+L +G+A  G+  +A  ++ +M +K +APNVVS   + 
Sbjct: 344 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 403

Query: 483 SGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGKEI 542
           SG  ++G    AL++F  M   G          + PN  T++  L     LSLLH GKE+
Sbjct: 404 SGCSKNGNFRNALKVFIKMQEEG----------VGPNAATMSTLLKILGCLSLLHSGKEV 463

Query: 543 HGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIMQH 602
           HG+ LR     + ++ +AL+DMY K   + SAI++F  IKN+++  WN ++ G     + 
Sbjct: 464 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 504

Query: 603 KVAVELFCQMLVEGIKPSSVTFSILL 629
           +  +  F  ML  G++P ++TF+ +L
Sbjct: 524 EEGIAAFSVMLEAGMEPDAITFTSVL 504

BLAST of Lsi08G009390 vs. TAIR 10
Match: AT5G55740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 1.0e-75
Identity = 169/583 (28.99%), Postives = 298/583 (51.11%), Query Frame = 0

Query: 106 KMAKLYAKDVKCVDSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESIL 165
           K+   YAK    ++    LF ++  R + ++AA+I   CR          F  M++  I 
Sbjct: 112 KLVIFYAK-CDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF 171

Query: 166 PDKYLVPTILKACSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINV 225
           PD ++VP + KAC   +  + G+ VHGY ++  L   +F+ ++L D YG CG L  +  V
Sbjct: 172 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 231

Query: 226 FDSMSEKDVVSWTALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYG-- 285
           FD + +++ V+W AL+  Y++ G  +EA+ +F  M+  G++P  ++ +  +S  A  G  
Sbjct: 232 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGV 291

Query: 286 ---------------ETDTAL--------------TYLEAMQEEGLSPRVNSWNGVISGF 345
                          E D  L               Y E + +      V +WN +ISG+
Sbjct: 292 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 351

Query: 346 VQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRAIHAYALKCELCTNI 405
           VQ G  +DA+ +   M L     + VT+A+++ A A  ++L LG+ +  Y ++    ++I
Sbjct: 352 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 411

Query: 406 YVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTSQAFERFRSMQHH 465
            +  +++DMY+KCG    A++VF    +K++ LWN ++A +   G + +A   F  MQ  
Sbjct: 412 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE 471

Query: 466 GLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNVLLSGFQQSGLSYEA 525
           G+ P+V+T+N ++    +NGQ  EA  +  +M    + PN++S   +++G  Q+G S EA
Sbjct: 472 GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 531

Query: 526 LELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASLSLLHKGKEIHGYMLRNAFEDN 585
           +   + M  +G          +RPN  +IT AL+ACA L+ LH G+ IHGY++RN    +
Sbjct: 532 ILFLRKMQESG----------LRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 591

Query: 586 HF-ILSALIDMYTKCESIDSAIQVFSRIKNRNVVCWNALIAGLMRIMQHKVAVELFCQML 645
              I ++L+DMY KC  I+ A +VF       +   NA+I+        K A+ L+  + 
Sbjct: 592 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 651

Query: 646 VEGIKPSSVTFSILLPALAERLDLKARRQLHSYIIKSQHLESC 657
             G+KP ++T + +L A     D+    ++ + I+  + ++ C
Sbjct: 652 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683

BLAST of Lsi08G009390 vs. TAIR 10
Match: AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 6.1e-65
Identity = 190/661 (28.74%), Postives = 319/661 (48.26%), Query Frame = 0

Query: 19  PSSSKFNFDLHPSFRFSRN---SMNVACRMYFTAVSVHNRPHGQFSPI--AQC-MDRNYG 78
           PSS+ F+     SF F R    S ++  R+Y   +  H++ H +   I   QC + ++  
Sbjct: 9   PSSAMFD-----SFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRK 68

Query: 79  GFN-VPTTRSFALFNHNAQVVKLNARRVDT--LFGKKMAKLYAKDVKCVDSDRKLFDEIP 138
            F+ +P   + AL    A   K     +D+    G  +  LYAK  + V    K FD + 
Sbjct: 69  VFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQ-VSYAEKQFDFL- 128

Query: 139 ERTLPAYAALIRAYCRSEKWNELFAAFRLMVDESILPDKYLVPTILKACSRRQMVKTGKM 198
           E+ + A+ +++  Y    K  ++  +F  + +  I P+K+    +L  C+R   V+ G+ 
Sbjct: 129 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 188

Query: 199 VHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTALVSAYIEEGL 258
           +H   I+  L  + + G AL+D Y  C  +  +  VF+ + + + V WT L S Y++ GL
Sbjct: 189 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 248

Query: 259 LDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTALTYLEAMQEEGLSPRVNSWNG 318
            +EA+ VF  M+  G +PD +++  +++ + R G+   A      M     SP V +WN 
Sbjct: 249 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNV 308

Query: 319 VISGFVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLKDLGLGRAIHAYALKCE 378
           +ISG  + G    A++ F NM          T+ S+L A   + +L LG  +HA A+K  
Sbjct: 309 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 368

Query: 379 LCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTSQAFERFR 438
           L +NIYV  SLV MYSKC + + A +VF   E+KN   WN +I  + + G++ +  E F 
Sbjct: 369 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 428

Query: 439 SMQHHGLKPDVVTYNTLLAGHAKNGQKVEAFKLLSEMLQKDLAPNVVSLNVLLSGFQQSG 498
            M+  G   D  T+ +LL+  A +       +  S +++K LA N+   N L+  + + G
Sbjct: 429 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 488

Query: 499 LSYEALELFQTMLCTG---------------------CLLNKVITLPIRPNTITITAALA 558
              +A ++F+ M                          L  ++    I  +   + + L 
Sbjct: 489 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 548

Query: 559 ACASLSLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIKNRNVVC 618
           AC  +  L++GK++H   ++   + +    S+LIDMY+KC  I  A +VFS +   +VV 
Sbjct: 549 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 608

Query: 619 WNALIAGLMRIMQHKVAVELFCQMLVEGIKPSSVTFSILLPALAERLDLKARRQLHSYII 650
            NALIAG  +    + AV LF +ML  G+ PS +TF+ ++ A  +   L    Q H  I 
Sbjct: 609 MNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 657

BLAST of Lsi08G009390 vs. TAIR 10
Match: AT2G39620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 239.6 bits (610), Expect = 7.4e-63
Identity = 168/597 (28.14%), Postives = 280/597 (46.90%), Query Frame = 0

Query: 119 DSDRKLFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRLMVDE-SILPDKYLVPTILKA 178
           D  R +FD + +  +  + ++IR Y R+    E    F  M +E  I PDKY     LKA
Sbjct: 50  DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKA 109

Query: 179 CSRRQMVKTGKMVHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSW 238
           C+     K G  +H       L SD++IG AL++ Y    DL  +  VFD M  KDVV+W
Sbjct: 110 CAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTW 169

Query: 239 TALVSAYIEEGLLDEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETDTA--------- 298
             +VS   + G    A+ +FH M+S  +  D +S   L+   ++  ++D           
Sbjct: 170 NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK 229

Query: 299 --------------------LTYLEAMQEEGLSPRVNSWNGVISGFVQNGYFKDALDVFI 358
                               L   E++ EE      +SW  +++ +  NG+F++ L++F 
Sbjct: 230 KGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289

Query: 359 NMLLFPENPNSVTVASILPACAGLKDLGLGRAIHAYALKCELCTNIYVEGSLVDMYSKCG 418
            M  +    N V  AS L A A + DL  G AIH YA++  L  ++ V  SL+ MYSKCG
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349

Query: 419 QDDYAEEVFAKAEKKNITLWNEIIATHVNQGKTSQAFERFRSMQHHGLKPDVVTYNTLLA 478
           + + AE++F   E +++  W+ +IA++   G+  +A   FR M    +KP+ VT  ++L 
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQ 409

Query: 479 G-----------------------------------HAKNGQKVEAFKLLSEMLQKDLAP 538
           G                                   +AK G+   A K    +  KD   
Sbjct: 410 GCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD--- 469

Query: 539 NVVSLNVLLSGFQQSGLSYEALELFQTMLCTGCLLNKVITLPIRPNTITITAALAACASL 598
             V+ N L  G+ Q G + +A ++++ M   G          + P++ T+   L  CA  
Sbjct: 470 -AVAFNALAQGYTQIGDANKAFDVYKNMKLHG----------VCPDSRTMVGMLQTCAFC 529

Query: 599 SLLHKGKEIHGYMLRNAFEDNHFILSALIDMYTKCESIDSAIQVFSRIK-NRNVVCWNAL 650
           S   +G  ++G ++++ F+    +  ALI+M+TKC+++ +AI +F +    ++ V WN +
Sbjct: 530 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 589

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FXH11.7e-9633.28Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... [more]
Q9SV261.1e-7432.02Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidop... [more]
Q9FM641.4e-7428.99Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop... [more]
Q9SS838.5e-6428.74Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... [more]
O806471.0e-6128.14Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5A7VGH40.0e+0085.23Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BDB00.0e+0085.08pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=36... [more]
A0A0A0KFW80.0e+0085.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1[more]
A0A6J1BQ735.0e-31080.56pentatricopeptide repeat-containing protein At1g19720-like OS=Momordica charanti... [more]
A0A6J1K3Z42.6e-30583.26pentatricopeptide repeat-containing protein At1g19720-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
XP_038884429.10.0e+0089.78pentatricopeptide repeat-containing protein At1g19720-like [Benincasa hispida][more]
KAA0064811.10.0e+0085.23pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008445371.10.0e+0085.08PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis m... [more]
XP_004146805.10.0e+0085.23pentatricopeptide repeat-containing protein At1g19720 [Cucumis sativus] >KGN4774... [more]
KAG6598662.10.0e+0083.01Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
AT1G19720.11.2e-9733.28Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT4G01030.17.6e-7632.02pentatricopeptide (PPR) repeat-containing protein [more]
AT5G55740.11.0e-7528.99Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G09040.16.1e-6528.74Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G39620.17.4e-6328.14Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 584..632
e-value: 5.8E-13
score: 48.8
coord: 232..269
e-value: 7.3E-9
score: 35.7
coord: 438..485
e-value: 5.5E-14
score: 52.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 408..440
e-value: 5.7E-4
score: 17.9
coord: 587..620
e-value: 9.0E-6
score: 23.5
coord: 235..268
e-value: 4.5E-9
score: 33.9
coord: 306..331
e-value: 4.0E-4
score: 18.4
coord: 441..475
e-value: 3.4E-7
score: 28.0
coord: 135..167
e-value: 8.8E-6
score: 23.6
coord: 270..302
e-value: 1.1E-6
score: 26.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 270..300
e-value: 1.1E-4
score: 22.2
coord: 306..331
e-value: 1.7E-4
score: 21.6
coord: 379..405
e-value: 0.92
score: 9.9
coord: 136..163
e-value: 0.037
score: 14.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 439..473
score: 12.320559
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 268..302
score: 11.925952
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 404..438
score: 9.832344
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 132..166
score: 9.930995
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 233..267
score: 13.548224
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 585..619
score: 10.490022
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 474..508
score: 9.492543
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 89..232
e-value: 1.5E-14
score: 56.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 254..375
e-value: 2.0E-24
score: 88.5
coord: 378..510
e-value: 9.3E-31
score: 109.3
coord: 511..667
e-value: 5.9E-26
score: 93.6
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 11..632
NoneNo IPR availablePANTHERPTHR47928:SF72SUBFAMILY NOT NAMEDcoord: 11..632

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G009390.1Lsi08G009390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding