Lsi08G008270 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G008270
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Copper transporter
Location	chr08: 16676698 .. 16677126 (+)
RNA-Seq Expression	Lsi08G008270
Synteny	Lsi08G008270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCACATGACCTTCTACTGGAGCAAGGAGGTGACTCTCCTCATCAATTCATGGCGGACAAATTCATGGTTGAGTTATTTCCTCTCTTTGCTTGCTTGTTTCATTGTCTCCATTTTCTACCAGTACTTGGAGAATTATCGAATCCGTTTGAAGCTTCTTCTGTGTCAGAAGCCGTCGCCGTCGGAGATCGAGGTCCCTCTCCTTCGATCTAAAGTGGCTGGGAAGTTTCAGGCTGTGAGATTTGCTGGAGCTCTGTTTTTCGGAGTCAACTCGGCGATCGGTTACCTTCTGATGCTCGCCATCATGTCCTTTAATGGCGGAGTTTTTATTTCAATTGTCTTAGGGCTTGCGATTGGTTATTTGGTGTTTAGGAGTGACGATGAGGACGTTAGTGTTACTGTTGAAAATCCTTGTGCATGTGCTTAG

mRNA sequence

ATGATGCACATGACCTTCTACTGGAGCAAGGAGGTGACTCTCCTCATCAATTCATGGCGGACAAATTCATGGTTGAGTTATTTCCTCTCTTTGCTTGCTTGTTTCATTGTCTCCATTTTCTACCAGTACTTGGAGAATTATCGAATCCGTTTGAAGCTTCTTCTGTGTCAGAAGCCGTCGCCGTCGGAGATCGAGGTCCCTCTCCTTCGATCTAAAGTGGCTGGGAAGTTTCAGGCTGTGAGATTTGCTGGAGCTCTGTTTTTCGGAGTCAACTCGGCGATCGGTTACCTTCTGATGCTCGCCATCATGTCCTTTAATGGCGGAGTTTTTATTTCAATTGTCTTAGGGCTTGCGATTGGTTATTTGGTGTTTAGGAGTGACGATGAGGACGTTAGTGTTACTGTTGAAAATCCTTGTGCATGTGCTTAG

Coding sequence (CDS)

ATGATGCACATGACCTTCTACTGGAGCAAGGAGGTGACTCTCCTCATCAATTCATGGCGGACAAATTCATGGTTGAGTTATTTCCTCTCTTTGCTTGCTTGTTTCATTGTCTCCATTTTCTACCAGTACTTGGAGAATTATCGAATCCGTTTGAAGCTTCTTCTGTGTCAGAAGCCGTCGCCGTCGGAGATCGAGGTCCCTCTCCTTCGATCTAAAGTGGCTGGGAAGTTTCAGGCTGTGAGATTTGCTGGAGCTCTGTTTTTCGGAGTCAACTCGGCGATCGGTTACCTTCTGATGCTCGCCATCATGTCCTTTAATGGCGGAGTTTTTATTTCAATTGTCTTAGGGCTTGCGATTGGTTATTTGGTGTTTAGGAGTGACGATGAGGACGTTAGTGTTACTGTTGAAAATCCTTGTGCATGTGCTTAG

Protein sequence

MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPSPSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIGYLVFRSDDEDVSVTVENPCACA

Homology

[Close]

BLAST of Lsi08G008270 vs. ExPASy Swiss-Prot
Match: Q69P80 (Copper transporter 5.1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT5.1 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.2e-37
Identity = 86/150 (57.33%), Postives = 104/150 (69.33%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKP- 60
           MMHMTFYW K+VT+L + WRT +W  Y LSL+A  + S FYQYLE +RIR+KLL   KP 
Sbjct: 1   MMHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPA 60

Query: 61  ------SPSEIEVP-LLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIS 120
                 S      P LL S  AG++ A R A A  FGVNS +GYLLMLA+MSFNGGVF++
Sbjct: 61  SIPPPASSDAARAPLLLPSSAAGRWPA-RLATAGLFGVNSGLGYLLMLAVMSFNGGVFVA 120

Query: 121 IVLGLAIGYLVFRSDDEDVSVTVENPCACA 143
           +V+GLA GYL FRS D +  V V+NPCACA
Sbjct: 121 VVVGLAAGYLAFRSSDGEDLVVVDNPCACA 149

[Close]

BLAST of Lsi08G008270 vs. ExPASy Swiss-Prot
Match: Q93VM8 (Copper transporter 5 OS=Arabidopsis thaliana OX=3702 GN=COPT5 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.9e-36
Identity = 80/148 (54.05%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYW  + T+L + W+T+SWLSY L+L+ACF+ S FYQYLEN RI+ K L   + +
Sbjct: 1   MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60

Query: 61  P------SEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIV 120
           P      S +  PL+    +G   A + A  L FGVN+AIGYLLMLA MSFNGGVFI+IV
Sbjct: 61  PPPPRSSSGVSAPLIPK--SGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIV 120

Query: 121 LGLAIGYLVFRSDDEDVSVTVENPCACA 143
           +GL  GY VFRSDD       ++PC CA
Sbjct: 121 VGLTAGYAVFRSDDGGADTATDDPCPCA 146

[Close]

BLAST of Lsi08G008270 vs. ExPASy Swiss-Prot
Match: Q6Z0Q9 (Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT5.2 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-23
Identity = 69/176 (39.20%), Postives = 95/176 (53.98%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHM+FYW   VT+L + WRT+ W  Y  SLLA F+ +  YQ+LE  R+RL+     +  
Sbjct: 1   MMHMSFYWGTSVTILFDGWRTSGWPGYLASLLALFLAAALYQHLEARRVRLRAGRRHRAG 60

Query: 61  --------------PSEIEVPLLRSKVAGKF---------------QAVRFAGALFFGVN 120
                         P+  +   L S   G+                 A   A A  FG++
Sbjct: 61  GGGGAASSAAGPVVPAASDARALLSAAGGRLGLGLGLGRRWMKEPRAAASAAAAALFGLS 120

Query: 121 SAIGYLLMLAIMSFNGGVFISIVLGLAIGYLVFR--SDDEDVSV---TVENPCACA 143
           +A+GYLLMLA+MSFNGGVF+++V GLA G+L FR  +D+ D  V    +E+PCACA
Sbjct: 121 AAVGYLLMLAVMSFNGGVFLAVVAGLAAGHLAFRGGADEADGGVGDDELESPCACA 176

[Close]

BLAST of Lsi08G008270 vs. ExPASy Swiss-Prot
Match: Q9FGU8 (Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10
Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTF+W K   +L + W   S   Y++ L   F++S F + L             K  
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGF-------MKSG 88

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           P+ +   LL++ V              + V +A+ YL+MLA+MSFNGGVF++ + G  +G
Sbjct: 89  PASLGGGLLQTAV--------------YTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLG 133

Query: 121 YLVFRS 127
           +++F S
Sbjct: 149 FMIFGS 133

[Close]

BLAST of Lsi08G008270 vs. ExPASy Swiss-Prot
Match: Q60EN8 (Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.3e-09
Identity = 43/125 (34.40%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 2   MHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPSP 61
           MHMTF+W K   +L   W       Y L++L  F +++  ++   YR+            
Sbjct: 23  MHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEF-RGYRV------------ 82

Query: 62  SEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIGY 121
             +E  L R +      A+R A      V   + YL+MLA+MSFNGGVF++IV G A G+
Sbjct: 83  --LEARLARRRAPRAAAALRTA---VHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGF 129

Query: 122 LVFRS 127
           L FR+
Sbjct: 143 LAFRA 129

[Close]

BLAST of Lsi08G008270 vs. ExPASy TrEMBL
Match: A0A1S3BCI1 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103488528 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWSKEVTLLINSWRTNSWLSY LSLLACFIVS+FYQYLENYRIRLKLL C KPS
Sbjct: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYSLSLLACFIVSVFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIE PLLRSKVAGKFQA+RFAGALFFGVNSAIGYLLMLAIMSFNGGVF++IV GLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQALRFAGALFFGVNSAIGYLLMLAIMSFNGGVFVAIVFGLAIG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YLVFRSDDEDV V+VENPCACA
Sbjct: 121 YLVFRSDDEDVIVSVENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. ExPASy TrEMBL
Match: A0A5D3BRJ7 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00060 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWSKEVTLL+NSWRTNSWLSY LSLLACFIVS+FYQYLENYRIRLKLL C KPS
Sbjct: 1   MMHMTFYWSKEVTLLVNSWRTNSWLSYSLSLLACFIVSVFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIE PLLRSKVAGKFQA+RFAGALFFGVNSAIGYLLMLAIMSFNGGVF++IV GLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQALRFAGALFFGVNSAIGYLLMLAIMSFNGGVFVAIVFGLAIG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YLVFRSDDEDV V+VENPCACA
Sbjct: 121 YLVFRSDDEDVIVSVENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. ExPASy TrEMBL
Match: A0A0A0KIJ7 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_6G361380 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-64
Identity = 130/142 (91.55%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWS+EVTLLINSWRT SW SY LSLLACFIVSIFYQYLENYRIRLKLL C KPS
Sbjct: 1   MMHMTFYWSREVTLLINSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIE PLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFI+IV GLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YLVFRSDDEDV V+ ENPCACA
Sbjct: 121 YLVFRSDDEDVIVSAENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. ExPASy TrEMBL
Match: A0A6J1KKN7 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111494025 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.3e-61
Identity = 122/142 (85.92%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWSK+VTLLI+SWRTNSWLSY LSLLACFIVS+FYQYLE+YRIRLKLL C+KPS
Sbjct: 1   MMHMTFYWSKQVTLLIDSWRTNSWLSYSLSLLACFIVSVFYQYLESYRIRLKLLSCRKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIEVPLLRSKVAGK+ AV+FA +LFFGVNSAIGYLLMLA+MSFNGGVF++IVLGLA G
Sbjct: 61  PSEIEVPLLRSKVAGKWTAVKFAESLFFGVNSAIGYLLMLAVMSFNGGVFVAIVLGLAFG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YL FRSDDED SV+ ENPCACA
Sbjct: 121 YLAFRSDDEDFSVSFENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. ExPASy TrEMBL
Match: A0A6J1BPA2 (Copper transporter OS=Momordica charantia OX=3673 GN=LOC111004560 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60
Identity = 121/142 (85.21%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWSKEVTLLINSWRTNSWLSYFLSL AC IVS+FYQY ENYRIRLKLL C+ PS
Sbjct: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PS IEVPL++SKVAGK+ A RFA ALFFGVNSAIGYLLMLAIMSFNGGVF+++VLGLAIG
Sbjct: 61  PSAIEVPLIQSKVAGKWPAARFAEALFFGVNSAIGYLLMLAIMSFNGGVFVAVVLGLAIG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YL FRSD EDV+V+VENPCACA
Sbjct: 121 YLAFRSDGEDVTVSVENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. NCBI nr
Match: XP_038886426.1 (copper transporter 5.1 [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 8.3e-67
Identity = 134/142 (94.37%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWSKEVTLLINSWRTNSWLSY LSLLACFIVSIFYQYLENYRIRLKLLLC+KPS
Sbjct: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYSLSLLACFIVSIFYQYLENYRIRLKLLLCRKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIE PLLRSKVAGKFQAVRFA ALF+GVNSAIGYLLMLAIMSFNGGVF++IVLGLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQAVRFAAALFYGVNSAIGYLLMLAIMSFNGGVFVAIVLGLAIG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YLVFRSDDEDVSV+VENPCACA
Sbjct: 121 YLVFRSDDEDVSVSVENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. NCBI nr
Match: XP_008445546.1 (PREDICTED: copper transporter 5.1 [Cucumis melo])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWSKEVTLLINSWRTNSWLSY LSLLACFIVS+FYQYLENYRIRLKLL C KPS
Sbjct: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYSLSLLACFIVSVFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIE PLLRSKVAGKFQA+RFAGALFFGVNSAIGYLLMLAIMSFNGGVF++IV GLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQALRFAGALFFGVNSAIGYLLMLAIMSFNGGVFVAIVFGLAIG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YLVFRSDDEDV V+VENPCACA
Sbjct: 121 YLVFRSDDEDVIVSVENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. NCBI nr
Match: KAA0064702.1 (copper transporter 5.1 [Cucumis melo var. makuwa] >TYK00719.1 copper transporter 5.1 [Cucumis melo var. makuwa])

HSP 1 Score: 258.5 bits (659), Expect = 3.5e-65
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWSKEVTLL+NSWRTNSWLSY LSLLACFIVS+FYQYLENYRIRLKLL C KPS
Sbjct: 1   MMHMTFYWSKEVTLLVNSWRTNSWLSYSLSLLACFIVSVFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIE PLLRSKVAGKFQA+RFAGALFFGVNSAIGYLLMLAIMSFNGGVF++IV GLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQALRFAGALFFGVNSAIGYLLMLAIMSFNGGVFVAIVFGLAIG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YLVFRSDDEDV V+VENPCACA
Sbjct: 121 YLVFRSDDEDVIVSVENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. NCBI nr
Match: XP_004144217.1 (copper transporter 5.1 [Cucumis sativus] >KGN47576.1 hypothetical protein Csa_018961 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 6.6e-64
Identity = 130/142 (91.55%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWS+EVTLLINSWRT SW SY LSLLACFIVSIFYQYLENYRIRLKLL C KPS
Sbjct: 1   MMHMTFYWSREVTLLINSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIE PLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFI+IV GLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YLVFRSDDEDV V+ ENPCACA
Sbjct: 121 YLVFRSDDEDVIVSAENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. NCBI nr
Match: XP_022999778.1 (copper transporter 5.1 [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 6.8e-61
Identity = 122/142 (85.92%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYWSK+VTLLI+SWRTNSWLSY LSLLACFIVS+FYQYLE+YRIRLKLL C+KPS
Sbjct: 1   MMHMTFYWSKQVTLLIDSWRTNSWLSYSLSLLACFIVSVFYQYLESYRIRLKLLSCRKPS 60

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           PSEIEVPLLRSKVAGK+ AV+FA +LFFGVNSAIGYLLMLA+MSFNGGVF++IVLGLA G
Sbjct: 61  PSEIEVPLLRSKVAGKWTAVKFAESLFFGVNSAIGYLLMLAVMSFNGGVFVAIVLGLAFG 120

Query: 121 YLVFRSDDEDVSVTVENPCACA 143
           YL FRSDDED SV+ ENPCACA
Sbjct: 121 YLAFRSDDEDFSVSFENPCACA 142

[Close]

BLAST of Lsi08G008270 vs. TAIR 10
Match: AT5G20650.1 (copper transporter 5 )

HSP 1 Score: 151.4 bits (381), Expect = 5.6e-37
Identity = 80/148 (54.05%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTFYW  + T+L + W+T+SWLSY L+L+ACF+ S FYQYLEN RI+ K L   + +
Sbjct: 1   MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60

Query: 61  P------SEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIV 120
           P      S +  PL+    +G   A + A  L FGVN+AIGYLLMLA MSFNGGVFI+IV
Sbjct: 61  PPPPRSSSGVSAPLIPK--SGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIV 120

Query: 121 LGLAIGYLVFRSDDEDVSVTVENPCACA 143
           +GL  GY VFRSDD       ++PC CA
Sbjct: 121 VGLTAGYAVFRSDDGGADTATDDPCPCA 146

[Close]

BLAST of Lsi08G008270 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTF+W K   +L + W   S   Y++ L   F++S F + L             K  
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGF-------MKSG 88

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
           P+ +   LL++ V              + V +A+ YL+MLA+MSFNGGVF++ + G  +G
Sbjct: 89  PASLGGGLLQTAV--------------YTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLG 133

Query: 121 YLVFRS 127
           +++F S
Sbjct: 149 FMIFGS 133

[Close]

BLAST of Lsi08G008270 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 61.6 bits (148), Expect = 5.8e-10
Identity = 39/126 (30.95%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTF+W K   +L + W   S   Y L L+  F++++  ++L +  I           
Sbjct: 24  MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSI----------- 83

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAIG 120
                   LR +     +A        + + + + YL+MLA+MSFNGGVFI  + G A+G
Sbjct: 84  --------LRGR-GSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVG 129

Query: 121 YLVFRS 127
           +++F S
Sbjct: 144 FMLFGS 129

[Close]

BLAST of Lsi08G008270 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-09
Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTF+W K   +L + W   S   Y L L+  F++++  ++L +              
Sbjct: 29  MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAH-------------- 88

Query: 61  PSEIEVPLLRSKVAGKF-QAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFISIVLGLAI 120
                 P+LR  V+G   +A   A    + + + + YL+MLA+MSFN GVFI  + G  +
Sbjct: 89  -----SPILR--VSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGV 134

Query: 121 GYLVFRS 127
           G+ +F S
Sbjct: 149 GFFLFGS 134

[Close]

BLAST of Lsi08G008270 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-09
Identity = 45/151 (29.80%), Postives = 69/151 (45.70%), Query Frame = 0


Query: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLLACFIVSIFYQYLENYRIRLKLLLCQKPS 60
           MMHMTF+W K   +L + W   S   Y L L+  F +++  ++L +              
Sbjct: 41  MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAH-------------- 100

Query: 61  PSEIEVPLLRSKVAGKFQAVRFAGAL---FFGVNSAIGYLLMLAIMSFNGGVFISIVLGL 120
                  LLR        A R AG +    + +   + YL+MLA+MSFN GVF+  + G 
Sbjct: 101 -----SSLLRGSTGD--SANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGH 160

Query: 121 AIGYLVF-------RSDDEDVSVTVENPCAC 142
           A+G+++F        SDD   +    + CAC
Sbjct: 161 AVGFMLFGSQTFRNTSDDRKTNYVPPSGCAC 170

The following BLAST results are available for this feature:

BLAST of Lsi08G008270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q69P80	4.2e-37	57.33	Copper transporter 5.1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT5.1 PE=2 ...	[more]
Q93VM8	7.9e-36	54.05	Copper transporter 5 OS=Arabidopsis thaliana OX=3702 GN=COPT5 PE=1 SV=1	[more]
Q6Z0Q9	2.6e-23	39.20	Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT...	[more]
Q9FGU8	1.5e-10	32.54	Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1	[more]
Q60EN8	6.3e-09	34.40	Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1	[more]

BLAST of Lsi08G008270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BCI1	1.3e-65	92.25	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103488528 PE=3 SV=1	[more]
A0A5D3BRJ7	1.7e-65	91.55	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G0...	[more]
A0A0A0KIJ7	3.2e-64	91.55	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_6G361380 PE=3 SV=1	[more]
A0A6J1KKN7	3.3e-61	85.92	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111494025 PE=3 SV=1	[more]
A0A6J1BPA2	1.6e-60	85.21	Copper transporter OS=Momordica charantia OX=3673 GN=LOC111004560 PE=3 SV=1	[more]

BLAST of Lsi08G008270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886426.1	8.3e-67	94.37	copper transporter 5.1 [Benincasa hispida]	[more]
XP_008445546.1	2.7e-65	92.25	PREDICTED: copper transporter 5.1 [Cucumis melo]	[more]
KAA0064702.1	3.5e-65	91.55	copper transporter 5.1 [Cucumis melo var. makuwa] >TYK00719.1 copper transporter...	[more]
XP_004144217.1	6.6e-64	91.55	copper transporter 5.1 [Cucumis sativus] >KGN47576.1 hypothetical protein Csa_01...	[more]
XP_022999778.1	6.8e-61	85.92	copper transporter 5.1 [Cucurbita maxima]	[more]

BLAST of Lsi08G008270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20650.1	5.6e-37	54.05	copper transporter 5	[more]
AT5G59040.1	1.1e-11	32.54	copper transporter 3	[more]
AT2G26975.1	5.8e-10	30.95	Ctr copper transporter family	[more]
AT3G46900.1	4.9e-09	31.50	copper transporter 2	[more]
AT5G59030.1	6.4e-09	29.80	copper transporter 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 4..124 e-value: 2.0E-19 score: 70.7
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 1..142
None	No IPR available	PANTHER	PTHR12483:SF92	COPPER TRANSPORTER 5.1-LIKE	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G008270.1	Lsi08G008270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity