Lsi08G007930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G007930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr08: 16328430 .. 16329677 (-)
RNA-Seq Expression	Lsi08G007930
Synteny	Lsi08G007930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTATCGAAAAATAAATAGATAAATCTCACACGGCTGCCAGGTCAGCCTCCCATGTAGAGTTCAAAAAATATGACCGTTGGGGACGCTCCTCTCATTTAAATCTCAATTCAAACCCATCGCCAAAAATCTGCAACCAAACGTATCTTCTTCACAGATTTTAACGAGAAAATAGCACTCTTATCTCTCTCTATTTCATCCCTTTGCATTTCCCCATCGATTTCCTACATCCATGTCTAAGCTGAGATCTGATCGCAGGCCGCCGCTAGCCAGATCGCCCTTGCGTCTCCGATCTCGCCGGGTTCCTCAATCCAATTCAACAACCTCGATGCAAACGCCGCCCGGTATGCTCTAATCAACCGATTGAATTTTCCTTCGGTTATCGATGAAGATTTTCTTGTTTTTCTTTAATTGATCAACAACGTTTTCGTTTGTGTACAGGTTCTTTGACCAAATCGCAGAAAATGAACCGTACTTCGGATCTGCAAGAATCGGAACTCCGACCTGAGTACCGGACGATTTCTTGCGAATTACGGGCTCTGGCAAGCATGGTTAGGATGGAATTAGGATGTGAAGAATCTGAAAACGGCGAAGGAGGCGATAAATTGAGCGTGAATTCGAGTTCTCTGTTCGAGCGAGGGAGATTTTACGACGAGTACTCCGCAAGGAGGAACGAGAGGCTTAAAAGGAAGAAAGCAGAATCCGTGACGGAGAGCAAGACTCCGTACAATCTCGGCGTAACGGTTGAATCTTCGAAACGTCACAGTTCAAAGAAGCTTGCAAATAGCTTGAGGAAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAGCGAGGCGGCTCCTAGGTATTTGCTGCGTAGCATGACGAAGGAGAATAAGAAGCCTCCATTGCCGGTGAATCTAGAGAAATCAGTGATTGATGCAGGAGAAAAGAAAATGGTCACTCGAAGAGTCCGAAGAATCTGAAGAATTAGGGATCAGATGTTGGCGTCAGGTGGAATTATAGTTTTCCTCCTTTCGTTATCTTTCCTTATTGATCTTTATTTCAGATGATGGTTAAAGAAACTGGATTTTTTTTTTATTATTATTATTTGTGTTTGGATTTGGATAGGATTTTTATGTACTGTAAATGTTGGGTTTGCTTTAGAATTTTCCAATTCGGAAATATCTGACCACATTTAGCTGCTGCTATGATGAGACAGAGAGGCATAGAGCATATTAGTTTTTAGGGTTTTTTTTTTTTTTAAGT

mRNA sequence

AATTTATCGAAAAATAAATAGATAAATCTCACACGGCTGCCAGGTCAGCCTCCCATGTAGAGTTCAAAAAATATGACCGTTGGGGACGCTCCTCTCATTTAAATCTCAATTCAAACCCATCGCCAAAAATCTGCAACCAAACGTATCTTCTTCACAGATTTTAACGAGAAAATAGCACTCTTATCTCTCTCTATTTCATCCCTTTGCATTTCCCCATCGATTTCCTACATCCATGTCTAAGCTGAGATCTGATCGCAGGCCGCCGCTAGCCAGATCGCCCTTGCGTCTCCGATCTCGCCGGGTTCCTCAATCCAATTCAACAACCTCGATGCAAACGCCGCCCGGTTCTTTGACCAAATCGCAGAAAATGAACCGTACTTCGGATCTGCAAGAATCGGAACTCCGACCTGAGTACCGGACGATTTCTTGCGAATTACGGGCTCTGGCAAGCATGGTTAGGATGGAATTAGGATGTGAAGAATCTGAAAACGGCGAAGGAGGCGATAAATTGAGCGTGAATTCGAGTTCTCTGTTCGAGCGAGGGAGATTTTACGACGAGTACTCCGCAAGGAGGAACGAGAGGCTTAAAAGGAAGAAAGCAGAATCCGTGACGGAGAGCAAGACTCCGTACAATCTCGGCGTAACGGTTGAATCTTCGAAACGTCACAGTTCAAAGAAGCTTGCAAATAGCTTGAGGAAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAGCGAGGCGGCTCCTAGGTATTTGCTGCGTAGCATGACGAAGGAGAATAAGAAGCCTCCATTGCCGGTGAATCTAGAGAAATCAGTGATTGATGCAGGAGAAAAGAAAATGGTCACTCGAAGAGTCCGAAGAATCTGAAGAATTAGGGATCAGATGTTGGCGTCAGGTGGAATTATAGTTTTCCTCCTTTCGTTATCTTTCCTTATTGATCTTTATTTCAGATGATGGTTAAAGAAACTGGATTTTTTTTTTATTATTATTATTTGTGTTTGGATTTGGATAGGATTTTTATGTACTGTAAATGTTGGGTTTGCTTTAGAATTTTCCAATTCGGAAATATCTGACCACATTTAGCTGCTGCTATGATGAGACAGAGAGGCATAGAGCATATTAGTTTTTAGGGTTTTTTTTTTTTTTAAGT

Coding sequence (CDS)

ATGTCTAAGCTGAGATCTGATCGCAGGCCGCCGCTAGCCAGATCGCCCTTGCGTCTCCGATCTCGCCGGGTTCCTCAATCCAATTCAACAACCTCGATGCAAACGCCGCCCGGTTCTTTGACCAAATCGCAGAAAATGAACCGTACTTCGGATCTGCAAGAATCGGAACTCCGACCTGAGTACCGGACGATTTCTTGCGAATTACGGGCTCTGGCAAGCATGGTTAGGATGGAATTAGGATGTGAAGAATCTGAAAACGGCGAAGGAGGCGATAAATTGAGCGTGAATTCGAGTTCTCTGTTCGAGCGAGGGAGATTTTACGACGAGTACTCCGCAAGGAGGAACGAGAGGCTTAAAAGGAAGAAAGCAGAATCCGTGACGGAGAGCAAGACTCCGTACAATCTCGGCGTAACGGTTGAATCTTCGAAACGTCACAGTTCAAAGAAGCTTGCAAATAGCTTGAGGAAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAGCGAGGCGGCTCCTAGGTATTTGCTGCGTAGCATGACGAAGGAGAATAAGAAGCCTCCATTGCCGGTGAATCTAGAGAAATCAGTGATTGATGCAGGAGAAAAGAAAATGGTCACTCGAAGAGTCCGAAGAATCTGA

Protein sequence

MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

Homology

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BLAST of Lsi08G007930 vs. ExPASy TrEMBL
Match: A0A5A7T4P2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00190 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.2e-89
Identity = 189/212 (89.15%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPPLARSPLRLRSRRVPQSNSTTS+QTPPGSLTKSQKM R SDLQESELRPE
Sbjct: 1   MSKMRSDRRPPLARSPLRLRSRRVPQSNSTTSIQTPPGSLTKSQKMIRPSDLQESELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-K 120
           YRTISCELRALASMVRMELGC ESE    GDKLSVNSSSLFERGRFYDEYSARRNERL K
Sbjct: 61  YRTISCELRALASMVRMELGCIESEGNGVGDKLSVNSSSLFERGRFYDEYSARRNERLKK 120

Query: 121 RKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMT 180
           RKKAE+V E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE APRYLLRSM 
Sbjct: 121 RKKAETVAEVKTPYNLGVTVESSKRQSSKKLVNSLRKSVSAAYSAERSETAPRYLLRSMM 180

Query: 181 KENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           KENKKPPLPVNLEKS+I  GE+KMVTRR RRI
Sbjct: 181 KENKKPPLPVNLEKSMIGGGERKMVTRRARRI 212

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BLAST of Lsi08G007930 vs. ExPASy TrEMBL
Match: E5GBZ2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.2e-89
Identity = 189/212 (89.15%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPPLARSPLRLRSRRVPQSNSTTS+QTPPGSLTKSQKM R SDLQESELRPE
Sbjct: 1   MSKMRSDRRPPLARSPLRLRSRRVPQSNSTTSIQTPPGSLTKSQKMIRPSDLQESELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-K 120
           YRTISCELRALASMVRMELGC ESE    GDKLSVNSSSLFERGRFYDEYSARRNERL K
Sbjct: 61  YRTISCELRALASMVRMELGCIESEGNGVGDKLSVNSSSLFERGRFYDEYSARRNERLKK 120

Query: 121 RKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMT 180
           RKKAE+V E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE APRYLLRSM 
Sbjct: 121 RKKAETVAEVKTPYNLGVTVESSKRQSSKKLVNSLRKSVSAAYSAERSETAPRYLLRSMM 180

Query: 181 KENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           KENKKPPLPVNLEKS+I  GE+KMVTRR RRI
Sbjct: 181 KENKKPPLPVNLEKSMIGGGERKMVTRRARRI 212

[Close]

BLAST of Lsi08G007930 vs. ExPASy TrEMBL
Match: A0A1S3CME4 (uncharacterized protein LOC103502623 OS=Cucumis melo OX=3656 GN=LOC103502623 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.2e-89
Identity = 189/212 (89.15%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPPLARSPLRLRSRRVPQSNSTTS+QTPPGSLTKSQKM R SDLQESELRPE
Sbjct: 1   MSKMRSDRRPPLARSPLRLRSRRVPQSNSTTSIQTPPGSLTKSQKMIRPSDLQESELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-K 120
           YRTISCELRALASMVRMELGC ESE    GDKLSVNSSSLFERGRFYDEYSARRNERL K
Sbjct: 61  YRTISCELRALASMVRMELGCIESEGNGVGDKLSVNSSSLFERGRFYDEYSARRNERLKK 120

Query: 121 RKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMT 180
           RKKAE+V E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE APRYLLRSM 
Sbjct: 121 RKKAETVAEVKTPYNLGVTVESSKRQSSKKLVNSLRKSVSAAYSAERSETAPRYLLRSMM 180

Query: 181 KENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           KENKKPPLPVNLEKS+I  GE+KMVTRR RRI
Sbjct: 181 KENKKPPLPVNLEKSMIGGGERKMVTRRARRI 212

[Close]

BLAST of Lsi08G007930 vs. ExPASy TrEMBL
Match: A0A6J1G3W4 (uncharacterized protein LOC111450549 OS=Cucurbita moschata OX=3662 GN=LOC111450549 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.2e-89
Identity = 187/211 (88.63%), Postives = 197/211 (93.36%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPPLARSPLRLRSRRVPQSNS TSMQTPPGSLTKS KM R SDLQE+ELRPE
Sbjct: 1   MSKMRSDRRPPLARSPLRLRSRRVPQSNS-TSMQTPPGSLTKSLKMIRPSDLQETELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKR 120
           YRTISCELRALASMV+MELGCEESE G  GD+LSVNSSSLFERGRFYDEYSARRNERLKR
Sbjct: 61  YRTISCELRALASMVKMELGCEESEKGGVGDQLSVNSSSLFERGRFYDEYSARRNERLKR 120

Query: 121 KKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTK 180
           KKAES +E KTPY LGVTVESSKRHSSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTK
Sbjct: 121 KKAESASEIKTPYTLGVTVESSKRHSSKKLANSLRKSVGAAFSVEQSAAAPRYLLRSMTK 180

Query: 181 ENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           ENKKPPLPVNLEKSVI AGE+K+ TR+VRRI
Sbjct: 181 ENKKPPLPVNLEKSVIAAGERKITTRKVRRI 210

[Close]

BLAST of Lsi08G007930 vs. ExPASy TrEMBL
Match: A0A0A0KIG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G357020 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.0e-87
Identity = 186/212 (87.74%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPP+ARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQK  R SDLQESELRPE
Sbjct: 1   MSKMRSDRRPPIARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKTIRPSDLQESELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-K 120
           YRTISCELRALASMVRMELGCEE E+   GDK SVNSSSLFERGR YDEYSARRNERL K
Sbjct: 61  YRTISCELRALASMVRMELGCEEYESNGVGDKSSVNSSSLFERGRLYDEYSARRNERLKK 120

Query: 121 RKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMT 180
           RKKAESV E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE  PRYLLRSM 
Sbjct: 121 RKKAESVAEVKTPYNLGVTVESSKRQSSKKLVNSLRKSVSAAYSEERSETGPRYLLRSMM 180

Query: 181 KENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           KENKKPPLPVNLEKS I  GE+KMVTRR RRI
Sbjct: 181 KENKKPPLPVNLEKSTIGGGERKMVTRRARRI 212

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BLAST of Lsi08G007930 vs. NCBI nr
Match: XP_038886147.1 (uncharacterized protein LOC120076404 [Benincasa hispida])

HSP 1 Score: 347.4 bits (890), Expect = 8.5e-92
Identity = 191/211 (90.52%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPPLARSPLRLRSRRVPQSNST SMQTPPGSLTKSQKMNR  DLQESELRPE
Sbjct: 1   MSKIRSDRRPPLARSPLRLRSRRVPQSNSTPSMQTPPGSLTKSQKMNRLPDLQESELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKR 120
           YR ISCELRALASMVRMELGCEESENG  GDKL+VNSSSLFERGRFYD YSARRNERLKR
Sbjct: 61  YRMISCELRALASMVRMELGCEESENGGDGDKLNVNSSSLFERGRFYDVYSARRNERLKR 120

Query: 121 KKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTK 180
           KKAESV E KTP+NLGVTVESSKRHSSKKL NSLRKSVSAAYSVERSE APRYLLRSMTK
Sbjct: 121 KKAESVAEIKTPHNLGVTVESSKRHSSKKLVNSLRKSVSAAYSVERSEVAPRYLLRSMTK 180

Query: 181 ENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           ENKKPPLPVNLEKSVI AGE+K+  RR RRI
Sbjct: 181 ENKKPPLPVNLEKSVIAAGERKIGPRRARRI 211

[Close]

BLAST of Lsi08G007930 vs. NCBI nr
Match: XP_008464847.1 (PREDICTED: uncharacterized protein LOC103502623 [Cucumis melo] >ADN33991.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0038452.1 uncharacterized protein E6C27_scaffold119G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 337.8 bits (865), Expect = 6.7e-89
Identity = 189/212 (89.15%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPPLARSPLRLRSRRVPQSNSTTS+QTPPGSLTKSQKM R SDLQESELRPE
Sbjct: 1   MSKMRSDRRPPLARSPLRLRSRRVPQSNSTTSIQTPPGSLTKSQKMIRPSDLQESELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-K 120
           YRTISCELRALASMVRMELGC ESE    GDKLSVNSSSLFERGRFYDEYSARRNERL K
Sbjct: 61  YRTISCELRALASMVRMELGCIESEGNGVGDKLSVNSSSLFERGRFYDEYSARRNERLKK 120

Query: 121 RKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMT 180
           RKKAE+V E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE APRYLLRSM 
Sbjct: 121 RKKAETVAEVKTPYNLGVTVESSKRQSSKKLVNSLRKSVSAAYSAERSETAPRYLLRSMM 180

Query: 181 KENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           KENKKPPLPVNLEKS+I  GE+KMVTRR RRI
Sbjct: 181 KENKKPPLPVNLEKSMIGGGERKMVTRRARRI 212

[Close]

BLAST of Lsi08G007930 vs. NCBI nr
Match: XP_022946511.1 (uncharacterized protein LOC111450549 [Cucurbita moschata] >KAG6599101.1 hypothetical protein SDJN03_08879, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030039.1 hypothetical protein SDJN02_08385 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.7 bits (862), Expect = 1.5e-88
Identity = 187/211 (88.63%), Postives = 197/211 (93.36%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPPLARSPLRLRSRRVPQSNS TSMQTPPGSLTKS KM R SDLQE+ELRPE
Sbjct: 1   MSKMRSDRRPPLARSPLRLRSRRVPQSNS-TSMQTPPGSLTKSLKMIRPSDLQETELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKR 120
           YRTISCELRALASMV+MELGCEESE G  GD+LSVNSSSLFERGRFYDEYSARRNERLKR
Sbjct: 61  YRTISCELRALASMVKMELGCEESEKGGVGDQLSVNSSSLFERGRFYDEYSARRNERLKR 120

Query: 121 KKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTK 180
           KKAES +E KTPY LGVTVESSKRHSSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTK
Sbjct: 121 KKAESASEIKTPYTLGVTVESSKRHSSKKLANSLRKSVGAAFSVEQSAAAPRYLLRSMTK 180

Query: 181 ENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           ENKKPPLPVNLEKSVI AGE+K+ TR+VRRI
Sbjct: 181 ENKKPPLPVNLEKSVIAAGERKITTRKVRRI 210

[Close]

BLAST of Lsi08G007930 vs. NCBI nr
Match: XP_023546758.1 (uncharacterized protein LOC111805770 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.5 bits (859), Expect = 3.3e-88
Identity = 186/211 (88.15%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPPLARSPLRLRSRRVPQSNS TSMQTPPGSLTKS KM R SDLQE+ELRPE
Sbjct: 1   MSKMRSDRRPPLARSPLRLRSRRVPQSNS-TSMQTPPGSLTKSLKMIRPSDLQETELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKR 120
           YRTISCELRAL SMV+MELGCEESE G  GDKLSVNSSSLFERGRFYDEYSARRNERLKR
Sbjct: 61  YRTISCELRALTSMVKMELGCEESEKGGVGDKLSVNSSSLFERGRFYDEYSARRNERLKR 120

Query: 121 KKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTK 180
           KKAES +E KTPY LGVTVESSKRHSSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTK
Sbjct: 121 KKAESASEIKTPYTLGVTVESSKRHSSKKLANSLRKSVGAAFSVEQSAAAPRYLLRSMTK 180

Query: 181 ENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           ENKKPPLPVNLEKSVI AGE+K+ TR++RRI
Sbjct: 181 ENKKPPLPVNLEKSVIAAGERKITTRKLRRI 210

[Close]

BLAST of Lsi08G007930 vs. NCBI nr
Match: XP_004144237.1 (uncharacterized protein LOC101215930 [Cucumis sativus] >KGN47536.1 hypothetical protein Csa_018969 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 6.3e-87
Identity = 186/212 (87.74%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPE 60
           MSK+RSDRRPP+ARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQK  R SDLQESELRPE
Sbjct: 1   MSKMRSDRRPPIARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKTIRPSDLQESELRPE 60

Query: 61  YRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-K 120
           YRTISCELRALASMVRMELGCEE E+   GDK SVNSSSLFERGR YDEYSARRNERL K
Sbjct: 61  YRTISCELRALASMVRMELGCEEYESNGVGDKSSVNSSSLFERGRLYDEYSARRNERLKK 120

Query: 121 RKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMT 180
           RKKAESV E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE  PRYLLRSM 
Sbjct: 121 RKKAESVAEVKTPYNLGVTVESSKRQSSKKLVNSLRKSVSAAYSEERSETGPRYLLRSMM 180

Query: 181 KENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           KENKKPPLPVNLEKS I  GE+KMVTRR RRI
Sbjct: 181 KENKKPPLPVNLEKSTIGGGERKMVTRRARRI 212

[Close]

BLAST of Lsi08G007930 vs. TAIR 10
Match: AT5G42330.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-31
Identity = 103/223 (46.19%), Postives = 136/223 (60.99%), Query Frame = 0


Query: 1   MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTP-PGSLTKSQKMNRTSDLQESELRP 60
           MSK+RS  +PPL +SP+RLRSR+V  S    S+QTP PG L   ++      L + +L P
Sbjct: 1   MSKMRSYLKPPLPKSPIRLRSRQVLHS----SLQTPSPGFLKPGRR------LSDVDLNP 60

Query: 61  ----EYRTISCELRALASMVRMELGCEESENGEGG-DKLSVNSSSLFERGRFYDEYSARR 120
               +Y +IS E+ ALA MV+ E   EE        + L+ NS  LFERGRFY+EYSA+R
Sbjct: 61  KPQIKYSSISSEIHALAKMVKDEFAEEEDRKKSSNLESLAKNSVPLFERGRFYEEYSAKR 120

Query: 121 NERLKRKKAESVTE----SKTPYNLGVTVE--SSKRHSSKKLANSLRKSVSAAYSVERSE 180
           NERL+RKK E   E      TPYNLGV  E  ++KR  + K   S++K+V    S+  S 
Sbjct: 121 NERLRRKKGEEAVEGGVVKGTPYNLGVNHEPMTNKRRGTAK-KESIKKTV---VSMVESS 180

Query: 181 AAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI 212
           + PRY LRSM KEN+KPPLP+N+  S +    K + TR+ RRI
Sbjct: 181 SIPRYSLRSMAKENRKPPLPLNVAVSAM----KSVTTRKGRRI 205

The following BLAST results are available for this feature:

BLAST of Lsi08G007930 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G007930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4P2	3.2e-89	89.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
E5GBZ2	3.2e-89	89.15	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3CME4	3.2e-89	89.15	uncharacterized protein LOC103502623 OS=Cucumis melo OX=3656 GN=LOC103502623 PE=...	[more]
A0A6J1G3W4	7.2e-89	88.63	uncharacterized protein LOC111450549 OS=Cucurbita moschata OX=3662 GN=LOC1114505...	[more]
A0A0A0KIG5	3.0e-87	87.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G357020 PE=4 SV=1	[more]

BLAST of Lsi08G007930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886147.1	8.5e-92	90.52	uncharacterized protein LOC120076404 [Benincasa hispida]	[more]
XP_008464847.1	6.7e-89	89.15	PREDICTED: uncharacterized protein LOC103502623 [Cucumis melo] >ADN33991.1 hypot...	[more]
XP_022946511.1	1.5e-88	88.63	uncharacterized protein LOC111450549 [Cucurbita moschata] >KAG6599101.1 hypothet...	[more]
XP_023546758.1	3.3e-88	88.15	uncharacterized protein LOC111805770 [Cucurbita pepo subsp. pepo]	[more]
XP_004144237.1	6.3e-87	87.74	uncharacterized protein LOC101215930 [Cucumis sativus] >KGN47536.1 hypothetical ...	[more]

BLAST of Lsi08G007930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42330.1	2.3e-31	46.19	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..48
None	No IPR available	PANTHER	PTHR37259:SF2	OS07G0474300 PROTEIN	coord: 1..211
None	No IPR available	PANTHER	PTHR37259	OS07G0474300 PROTEIN	coord: 1..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G007930.1	Lsi08G007930.1	mRNA