Lsi08G007040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G007040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Sorting and assembly machinery component 50-like protein
Location	chr08: 15337676 .. 15354567 (+)
RNA-Seq Expression	Lsi08G007040
Synteny	Lsi08G007040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTGCTTTTATATGGTTATCTACCCCCATTAAATCAAAATGGTTTGACATCTTTTATGTGGCTTGTGCTTCTCGTGGTTCCCTTTTCAGATATGCCAATTACATTAATATAAGAAAGAAATGAGTTGCTGCAAATTAGAATCTAAAAGTGAGCTTCCCAGGTAGTGAACAATGTTGATCGCATGCTTGCTGTATTTTCTAGCTTAATACTACAATATGTGCTTAAAACTCATTCGAACTGTTCCGGAACGTGAAGGTTGTTAAATTGGTAATCTTACACTCATTTCTAGCCTTAAGAATGGTTGGTTGTTTGATTCATTATTCAGTATATGAGTATGAGAATGAAGTATTCTATGGAGTGTTTTGAATTCAAGTAGATCGGAAGGAGGATCATGCTGTTGTCCGTGTGTAACCAAAGCACACTTGTAATTTGAAATCAAGTTTTTTTTTTTTTTTTTTTTGTTCTTTTTTTCCCACTCTGTCATTATTTTGAGACATTGTACTTCCTGGCACCAAACCTCGTAACCATGGATATTTGAACTTTTTGATGCTTATTACATATCAATTAGCAACTATGAGTTCATAAACTCTGGTTATTTTTTTAACGTGGTTCCTCTGTTCAGAACCAGACTATGATTCCCAAGATAAATTTTATTGTCTAATTGGAATTCGTGTGTGAACTATTTGGCTTGCTACCTCTAGTACAAAGTTTGAAGTGGTATGATGCTTTTGTAGGCTCGTTCGTGGACTTTTGAAGGTTCTGTTAAGTATAAAAATTGGCTTGGATATGGGGATTTATGGGATGGCTCTTTGGCATATGGTCCTAATCAAACATCTGAGGTGAGTGCCGGTGTTTATTTCCCTAGGCTGAAGCGATTGGTGACTCCTTTGGTGGCACGACTATCCCTACTTTCCCAAGATTGGTTGGAGTTTTCGTCTTACAAAGAGCGGTCTTTAGGCCTTTCTCTTGGTCTATATTCAACAAAGTATCATGATTTGGGATACAACCTTGGATGGCGCACCATAACTGACCCTTCACAGATGGCGTCTAATTCAGTACGGAGACAACTTGGAAATAGTTTACTTTCATCTCTAAAATATACTTTTAAGGTTGACAAGAGGAATTCAGCAGTGAGGCCAACTAGAGGATATGCTTTTGTCTCTACTAGTCAAATTGGTGGTCTTGCACCTGATCACCGGAGCTTGCGATTTGTCCGCCAGGTTTTCTTCTTTTCCTTTTGACTCTCTGTAACAATAAAAGATTTTCCCAAGCCTATGTGTAACTAACAGTTCGTTGTTGGACATTTATAGTTGTGCTGTGTGATACTTGTTTCTTTCAATGTTGAGAAAAACTTTCTGTTTTCAACTTTAACAGGAATTTGATCTACGGTATGCCATTCCTTTCGGCTTTGATCGCGCTGCCATGAACTTTGGAGTTTCTGCCGGAGTTGTTTTTCCTTGGGGAAATGGGTTTTTGAACAAGCCATCATCTCTTCCAGAACGCTTTTTCTTAGGTGGTGATTTCTCTCCCGTATGCACCATTGGAGGCCCCACAACTGTATGGGGATTTAAGACGCGTGGAATGGGACCAACTGAGCCAAGGCGCGAAGTGAGAGATGAAAATAAGGGTGAAAACAATGATTCTCTTGGAAGGGATTTTGTTGGAGGAGATCTTGCAGTCACTGCTTTTGCAGATCTTTCATTTGACCTCCCGATTCGCTGGTTAAGAGAACATGGAATCCACGGACACATATTTGCTGGTGCAGGCAACCTTGCAAAGTTGACAGAGAATGAGTTTCGCAGTTTCTCTTCTCAGAAGTTCATGGAAACATTCCGTACCTCTGTAGGAGTTGGAGTTGTGGTTCCGACAAGACTCTTCCGTCTAGAGGTCAGTCATGATCTCTGATTTGTGTGTTCTATTATTTTGGTAGATAATTTGTTGGTCTGGGTTTGATCTCTGTTTTTGTGTCTAAAGAAAAGGCGTGGTCCATACGGATCCTATATAATGTCCTGCTTGCTGTTTCCTCCACATTGTTTTCTATTGATCAGGAAAAAAGGACAACTGTTGATTGCATTACGATTTGATTTTTACTTGCTAATTATTCTAGTTTGGTTCCTATGAACAGGGGAACTTCTACTACATATTGAAGCAACAAGAGCATGATCGTGGAAAAACTGGCTTTCGGTTTAGCATTTCTGCTCCATCATAAATCTAATTTTGACGAGGTTTGATGTTCAGGAATTACAGAGTAAGGCGGAAGTTATTTTCTTTCTGAGTTATCATTTTGAACTGGATGAAAAAACCTTCTTTTTATAAACATCCAGGGAAATGACAAAAAAAGAAAAAAGAAAAACAAAGCTTTTCTTCAACCATGGAGAATGGAAGGAATAATATGATTTGTGATTGTTGTATTTGATCGAACATGTTACGGAAATCTCCTCTCAAAATTGGTTTCATTGACCCAAATGGGCGGATAATTTTTGTCCTCCATCAATGATATGAGACTTTCATTTCGTAGCCTGTACGGTTCATGATTTCCATCTCTCCACTAAATATTTTGTGCTCATCATGCTCAATTTTGTTTTCAATAGAATCAAATGTCTTTACCTTTATCCCTGCATTGTTATTTTTCTAGAGAATCCTCAAACTTTTATTCTTATTGGATATCTGAAATCCTTGGAATCCATTTCTACCTGGAATTTGGTTTATGATTCTATTAGATCATCAAGCTTCTCAATAGGATAATATAAGTATAACCATGGCTCTCTATTTCTCTCTCCTACTCTGTTTCTCTTTAGAGCTATTGCCTGTGGGAAAGAAATCCTAGTCTCTTAATTCATGGTAAACCCACCCATCAAATTAAATGCCCCAGATAGGAAAAAGTCATATAAATGTAATTCTTTTGATTACTACAAGAAATTTTGCCTGTGGGAAAGAAATCCTAGTCTCTTAATTCATGGTGTGTCCCTTGTTCCTTTACCCTTGAGATTGTTGGTTTGGTTGAAAGAAAGTCTATCTTTGGGACCTGGCTGTGATGTGGACATTCTTAACCATGCAAGGAACTCAATCACTACAAGAAATCTTGCATTTTGCTGCCTTTCTAGTCACTCCTTGATTTTCAAATGTCTATTTTGGGCCTTGTTCTCCAAAATTTATGGCTTTTGCTTGGAGTTTTCCCCCAAAATTTGAGCGACGATTAAGTACAGCCTATGTTCACCTAATTCTATGCTTCCCTTTCCTTTATAGAAAAAATGACAAATTTTTATTGGAGAGCTGCACAAAGTAAGTGCAGCCTAGGCAACACTTAAAGGGCAGTTACACATATAGCAAGATCTAAAATATTAGAAAATATAACACAATACAAAAAATATTGTAAATATAGTAAAATCTAGATCTAGCTATGTGAGTCATCAGTGATAGACAGTCTATTGCCAATACTGTCTATCATTGATAGATTTTGCTATATTTGCAATTTTTTTAAATGTTATACATTTAATTATTATTCTTAAAAGTGCTGCCCAATGCAATTATCCATCTTTCAAAACTTTGTCTCAATTTTTCCATGTACTTGCTTGACGAAAGGCTTTCTTTTCTCGTGTCTTCTCTGCTCTTCTTGGCCCTTTTTCCTTTGTGTTGGAAGTCTTGGATTCTGTCATAGATTTCAGTGAATCCACGCCTGGGTATGCAGAAACTGAAGGAAAATTTCTAGTACCATATTTGTACGAAATTATTTTCCATGCTACCTCCCGTCCATAAAAGAAAGAATTAATAATGGTGTGAAGTTTACTAAATAAAATAATATATCATCTAATGATTTGTCAAATGTCGAAAAAGTAGAATATAAATTATTGTAGTATTAAATTTTTTCGACAATCGAATGAAACAATAGCGTTTTATATAGGAAAATTTCAGAACAAGGAGAAACATTAGTGATTTATGTAGCAAATTTGTTGGGCAATTTTAGGTTGGTTTAAATTGACTTCTAAGTGCACAATTTTTTTTTTCTATGATGGAAACTTATTTATTTGGAATATGTTTACCATATAAGTTGTTCTAATAGATTTTTTTGATCGGTAACAAACAAACGTAATAAATCAAAGTCATCTTTGATACTGTCATTGCTTTCTCCAATTTGTTGCTGTGTTTTTTACCTTTCTTAAAAATACATTTAAAATTGTCAAATTTCTAAAATAAAATTGATTTTTTTTAAATTGCTATTTCAATCTAAATTTTGTTTAGATTATGAAAACGTGCTTAAAAGTAGATAGTAAAAGAGTGAAACGGTAACCAAAAAGAACTTAGCTTAACTGATATTTGTATGTATTGAGAACACGAATCTACATCTGTATGTATTGAGAACCAAAAGATTCGTGGTTCAAATTTTTCTATTTTCAATTTGTACTTAAAAAAAAAAAAAATGATACGTGGATGTATTTTTTTCCTCAAAAAACATAATGGTTATTAAATAGGAATTTTTCATTATTAAAAAAAATAATGTAATCATTAATCGAACTCTACCTGAATATATATACACATGAAATATATACGTGCTTGCCATGTGCAACTGCTACCTGCAGATAATTGTTTCATTCAATGACGTTGAATTGCATATATTCAAATGCACCACATTTATTAATCTGCTTTGGCTTATAGACCAAGGCTTGAATGATGATCCAAGAAACTTTCATAGCGTTTTTGTGTCTTTACTTTTGAAAATGATTTTGTAATTTTGAGAAATACTAATATAGATTCGTGCATTAGGACCTATTTAATAACGTTCAACCAAAAAATCATAAAATGTAATTTTTTCAATACGTATATTTATATATTATTTTAATTTTCAATTTTGTATTTTGATTTTGCAGTATATAATTTTTTTTCCAATTAAAATACATTTAACCTCACTTTAATATTTCACAACCATGATATTTACAAAAGCAATAGAATCTAAATCGTCATCATTTAGGTCAAATGAATCTAATGACAAATAACACAGCTGATCAAATTTAGGTCAAATGAATCTAATGACAAATAACACAGCTGATCAAATTTAGACAATATTTGAATGATAAAAACAATTGTATTATTGTCTTTTTATTTTGCATTGGAACTTATTTATATTAGATAATGTAAAGATTTGATAATTTTATTTTATAGATTTTAATTCATTGATATATATTTTATGTTATATTATAACTACATTATATTCAAACTATAAAACAAAGAAAAGAATAAGGGAAAAAAATAATAAAAACGAAAACCAAGAAATAGTTATCAAACATGTTCTTGTTTTTGTTTCTTTTATTCAAGAAACAAGAATAGTCTCCGAACATATTCATGTTTTCAGTTCTTAAAAAACAAGAAACAAGAAATGAAAATGTTACCAAACGAGACCTCACTAAAACAAAGCTTCCGCTTATTTTGTTAGATTTATTTTAAATTTAATATTATCATTAATGTGGCCCATGTGCATTATCTACTAATTTATCTTTTAGACCTATTATTTTATTAGGCCAATTAAGTAAAAGATAATTCCTAAATTAAATAAAAGATAAAACCCTAATTAAACACCCTGATGGGAGGTGTCTATATAAAGACCCTAGGGATTGGTCCTCTCTCTGCCTCATTAAGTAGTTCTTTTCTTGAGAAACCTAATTAAGTTCTAAAGAAAGGCCAAGAGAGAGAAACACAATCCCTTAGAAGACTATGATCATGGATCAAGGTATGTTATTCTAATTAATATTATTGTGAAAATCATCTAGTTCAAAGATCTTGGTAGTTATTGTTTTATACAATATTAGAGTTTTATTGTATAATCATGAAGTTAAAATTTACATGTGGTTTTATTGTATAATCATGAAGTTAAAATTTACATGTGGTATCAGGGATTTGATTAAGAACTTGTGGTTTTCCATTGATGATTTATTGTATGATTTGATGTTTCCGCTGCTAAAAATTTTATTTTGTGAATATGATTCAAGGAAGTCTTTGTACTGTTGTAAGTTTTGAACAATAATCTGAAATTTATTTATTTTAAAAATAATCGATAAAGTTTTATTTCGATTTCATTCGAAGATTGAGATATAGACTTCTTGAAAAAGAAGAAAGAAAGATTTAAATTAGGAAATCTATATTCTATGAGTGTTGCCGTAAGAGAAGTCTATCGGTTGCCATAAGTCAACTTACTGAAGTTTTCTTCATGAATAAATTTTGTAAGTGTTTTGTTTTCTTGCTTTTGGCATTAATGCAATGTATGGTGAAATTTCAATCGATGATTATCATTGATTGAGTTTGAAACTTGAGTTATGAACTATGCTATGATTTTTTTTTTTTTTTTTTTTTTGAGTTTATTATTGATTCAAATGTATTATATGTACAATTAATGATATTTGTGAAAATTTAAGTTTAATGTTAATGTATTATGCACAAATTAAATCCCATCAAAATTTCGATTCCATCAAGTTTAACAAATTAAATTATGTATTTATTTTTGGTTTTATGTATTATGTATATCATGAATAACACATGTTTAATTATATCTTTGTAATTTAAATTACACAATGGAATATGTAAAATTGCATATTTCATTGATAAAATTATTTGCAATATTTTTATTTTGTAAATTGTATGATATAAATTACTATTTGAAATTATGTTGTTTTTATATCTATATATTATGAATAATTTGTTCGTCATCAAAGTGGCCAAATTAGCAAATTTTATATAGATATCAAATGAAGGTTAGTTAATTCATGAAAATAAAGAAATTTTAGAAATTAACGGAAGATCTTTTATCTTTTGATTTAATTAATTAAAAGGATAAAAGATAATCAAAAGATAAACACAATCAATTATCTTTTGTTTTCAAATTTTAAATTATTCCTTATTCAAAATTCAAATTATTACTTATTTTAAATTTATATTATGCGAGATTTAAGTTTTATCTTTTATTAAAGATAATCGCACTTTCAGTTAATAATGTTTTGCAAATTTACATGATAAATAATTTGTGGTTATTTTATTATGATATCTATAGTATGAATAATTTGTTAGTCACCAAAGTGGCCAAATTAGTAAATGTAAGTTCTATATAGATATCAAATTTAAGTCAATTATCAATTACTCATGTTTGTAGTTGTTTTATTGTGATATATCTATGTTATGAATAATTTGTTAGTCACCAAAGTGGCCTAATTAGTAAGTCTTATAGATATTCCATTGATAATGTATGCAAATTAAGGTGATAAATTATTGTGATTACTTTATTATGATATCTATATTATGAATAATTTGTTAGTCACCAAAATGGCCAAATTAGTAAGTTCAATAGATATCAAATTAAATTTAATTCAATTACTCATGTTTATGTGATGCTAATGAAAGAGGTGATATTATGAAACATTAAAGTTATTATCATGAGTATATTGAAATTCATTATTATAAAACATTTTAAATCGCCCAAAGGTTGATGTGTTTTATAATTTTGAATCTTATCGTGGTTAATTGAGATGTTTGGCTAGATATTTTTAGTATACCCAAAGATAGCTAATGTATCTAGTTTGAGTATTTTTAATTACCAATTACGTAAAATTAAAGTTAGCATCAATTATGTATATATTGTTGTATCTTCCAAAGAAGAACTTCAATATATGCTTAATGATTATTATTGTTATCTGAATCTAAATTGTATATTTAAGTTTATTTATTCATAAGCATATTTATTCCATATTTGCAGTATTTGTTTCTATTTCTCTTCATTCGCAAGTTATGTCTATAATCAAGTTTAACGTACTCAATTTTTCTAATTAGTGCAAACAATTCTAATTCCATCTTGGTGCTTTGGAACTTGATTTGACACTTTTTAAGTGAGAAACCTGCTGCACTTACTAATGTTAGCAATGTTGAGGAAAGATCTTTCTATAAAGATTGGAAAAGATCAAATAGATTTAAGCCTAATGTATATGCGAGTGACTGTAGAAACGATATCAAGTCTACAATTATAAGAAAAAACTGAAAATGCTGAGGAATTTATGAAAATTGTTCTCAGTCTGAGTTAGTTGATAAGTCACTTGTTGGAACACTTATAAGTACCTTAACCACCATTAAGTTTGATGGTTTTCGTACTATGCATGAGCATATCTAAAGAAAGAATTAAAAGATTGGTAAAGAACGAAATCCTTCCAAATTTGGATTTTACTGGGAACTTGTGTGGATTGTATTAAAGGAAAACAAACAAAACACACGGTTAATAAAGTAGTCACAAGAAGCTCACAGCTCCTTGAAATTATACACACTGATATTTGTGGGCCTTTTGATGTTCCATCTTTTGGTGGAGAAAGTATTTCATTACCCTTATTGATGATTTTTTCACGTTATGGATATATCTACTTGTTACATGAAAATTTTCAATCGATAGATGCCTTGAAGGTATTTATCAATGAAGTTGAAAGACAATTAGATAGAAAAGTGAAAATCGTAAGATCTGATAGAGGTGGTGAATATTATGGAAAATATGAGGAGAATGGACAGCGCCCTGGTCCATTTGCTAAATTCCTAGAAAATCATTGCATATGTGCTTAATACACAATGCCAGAAACACCACAAAAAAATGGTGTTGCAGAAAGGCGCAATCGTATATTAATGAACATGGTTAGGAGTATGTTATTAATTCATCTTTACCCATATTTTTCTGAGTGTATGCTTTAAGAACTGCTCAATACTTATTAAACAGGGTTCCTAGTAAGTCAGTTCCAAAGACACCTTTTGAACTATGGACAGGAAGGAAACCCAGTTTAAGGCACCTACATGTTTGGGGTTGCCAAGCGGTAGTAAGCATTTATAATCCACACGAATAGAAACTGGATTCAAGTACAACCGGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGGTATAGATTTTATTGTCCTAGCCACAACACGATAATAGTTGAAACTGAAAATCCAAGGTTCATTAAAGATGACAAAATTAATGGGAGTTTGGAACTCTTTCATCTAAAGTGGAAATTCAAGAAGTTAGGGTGGAAACTCTTTCATCTATAACTTCTTCTCAAGTTGTTGTTCCTGTAGTTGTTGACTATGTTAACAATCCACAAGAAAAACAAATTAATGATCAAACTCCACATAATGATATTATGATAAATGAACCTGTAATTGAGCAAACCACAAGAAATAGAATTAAGAAGATCTATAAGACAAACAAGATTAGCTATTTCTGATGATTATGTGGTTTATTTGCATAAGTCAGAATTTGACTTAGGTATTGATAACGATCCAGTTTCGTTTTCACAAGCCATTAAAAGTGATAATTTTGCCAAATGGTTAGATGCCATGAAAGAAGTATTGAAATCAATGGATTACAATGAGGTTTGGGACCTTGTAGAATTGCCTAAAGGAAGTAAAAGAGTTAGGTATAGATGGGTCTTAAAGACTAAACATGACTCAAATGACAATATCGAACGATGCAAGGCTAGACTCATTGCCAAAGGTTATACTTAGAAATATGGTATTAACTATACAAAGACTTTTTCTCCTGTCTCTCAAAACGATTCATTGAGAATTATTATGACTTTAATTGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAAACTGCTTTTCTAAACGGGAATTTAGATGAAGAAATGCTCATGAATCAACCTGAAGGTTTTATGGTTGAAAGAAAGGAACATATAGTGTGTAAGCTAAAGAGATCAATATACAAACTTAAACAAACTTCCTGACAATGGTATCTTAAATTTAATGATGTCATCACATCTTTTGGATTTAAAGAAAACATCGTTGATCGATGTATATATCTAAATATCAGTAGGAGTAAGTTGGTAATTCTTGTTCTGTATGTTGATAACATCTTGCTAACTACTAATGACTTTGGTTTATTATGTCAGACCAAAGAATTTCTCTCTAAAAACTTTGAAATGAAGGATATGGGAGAGGCATCCTATGTGATTGAAATTGAAATGTTTCATGATCGAGCACATGGATTGTTAGGATTGTCTAAAAAACATATATTAATAAAGTTTTTAAAGAGATTTAAGGTGGATAAATGCTCTTAGTTCCAATTCAGAAGGGAGATAAGTTTAGTCTCATGTAATGTCTAAAGAATGAATTGGAACAAAATCAAATAGATACCATTCTGTATGCTTCTATTATCAGAAGTTTTAATATATGCACTAACTTGTACCATACCAGACATCAGTTTTGTTGTCGATATGCTGGACAGATATCAAAGTAATCTAGGAATTGATCATTGAAAAGCTACAAAGAAAGTGTTAAGGTATCTATCTGCAAAGAATAAAGGATTAGATGCTTACTTACAGAAGATCTGATCATCTTAAGGTGATTGGATATTTAGATTCAAACGTTGTTGAGTATGTGGATATATGAAAACCAATATTTAGCTATTTGTTCCGATTATGTGGAGGAACAATTTTATGTAAGAGTGTGAAGCAGTCTATCATCTCTGCATCCACTATGAAAGTTGAATTTGTAGCATATTGCTTTGAAGCTACAATTAATGTATGATTTATGGTTGTGGAACTTTATTTCAAGACTTGAATTTGTCGACAGTATTGTCAAGTTGCTGAAAATTTATTGTGATAATTCCACAACAGCCTTCTTCTCTAAACGACAAGTATTTAAAAGTGTTTAACATATTGAATTAAAATACTTTGTTAAAGAAAAGAAGTAGTTCAGAAACAAAGAGTGCCAGTCAAATACATTAACACAAATCTTATGATTGTGGATCCACTGACTAAAGAATTGTCATCAAAGACATTTAATGAACATGTCAAACGTATGGGCATTAGTGAATACCATTATTGATATTATGATTATGCTATTTGACACTCTGAGCTCATTTATTGAATGTTTCTGATTTTATCTTACAGTCCTATTTCTTATGATTGGTATATACATAAATGAATTACATAAATGAAACAGGACATTGTCTTTGATAAAGACGCTTATTGTTGGACCATTATTGATTTTCTTTATTATAGATCATGTTAGATGAAGAACTATTCTTTTGATACATGGAAGAGAGTATGTTAATGCAATGACGTATGACCGTCATGATCCTTTAGTAATTTCTTTGACTTGATATTGATATTATGATATGAAGATAAAAACTTTTATCTTCTCTGCGCATTATGTTTATAAATGTATATAGTAAATAACGTTAAATGGGCCAAGTGGGAGAATGTTAGATTTATTTTAAATTTAATATTATCATTAATGTGACCCATGTGCATTATCTACTAATTTATCTTTTAGGCCTATTATTTTATTAGGCCAATTAAATAAAAGATAATTCCTAAATTAAATAAAAGATAAAACCCTAATTAAACACCCTGATGGGAGGTGTCTATATAAAGACCCTAGGGATTGGTCCTCTCTCAGCCTAAGTAGTTCTTTTCTCCACATCAAGAAACCCTAATTAAGTTCTAAAGGAAGGCCAAGAGAGAGAAACACAATCCCTTAGAAGACTATGATTATAGATCAAGGTATGTTATTCTAATTAATATTATTGTGAAAATCATCTAGTTCAAAGATCTCGGTATTTATTGTTTTATACAATATTAGAGTTTTATTGTATAATCATGAAGTTAAAATTTACATATTTTTCATCTACAAAAGGTTATTGCGTTTAAAGCTTTAGGCGTGCCCCTCATGTTTTAACAAAAAAAAAAAAAAAAAACAAAACATAATTTAAATTTAAAATGAATGTGAAGAGAAAACTCAAATACATTTTGAGTTCTGAATTGAGAACAAGACTATGGACTCAGTTCCATTCTGATCCTTCTATTAAGAATGACAAAATACTTCAAAATTCTATCAAGATCACAAAGTAAGAGATAGACTTCAAAAAGTAACTCAATTTCCAATAATTTATACCTGGAAATTCTGAAAAAGTTTATACAAAATGGGCAGAGAAATGAGCATGTGAATGAAGAGAGTGCATCTTCAAAATAATATAAATAACATTATCTTCCTGTGAATAAGATATAAAACAATGTTGAGTTATTTATTCTTTTGGTATGTGTAGGCTGCACCATAATCAGCCAAGGTTACAAGTTAAAGGCAAGATGCAAAGCATACTTATTTTCACCTGATGAGTTTTGATTATAGTTGAGAGAGTTGAGTTTTCTTGAAAAATTTCTGCTTGGTTGGTTGGGTTTGAAAACCTTGGATTCAAATAAGCTTAATCATGATGATGAACATGTATGAACTGAAATATTTAACAAACATAAAAAGCATTGACGGAACTCACTCACTAGTTGTGTTTTCCATCATGGAACTGGGCATTCTTTGAAGACTTGAAAGTTTCAAGAAACTTCTTGGCCTTCTGTAGTTCTTGCTTCTGTCTTGACTTATCCCAATTATGTTCAGCTGCTAATATCTCAATTACTCGAGGCAATGCATGGTTAGCAGCATCGGTATCGAGGAAAGCAAGTCGTGATCTTCTGGCAATGAAATCTACTGCAGATTCACAGTACTCGTGCCGTGCACAGTATGCAACTTCAGCCTCCAAGAAGGGGTAGCCATGGGCTAACCGCTTCCCCAAACTCTCATTCTATCATTTAAAAAGAAGAATATATATATATATATATATATATATATATATATATTTTGTCATGGAAAGCTTATGAAACAAACTAGACTAAAAAATGTCTCTACATGCTAAAGATCATTTTATCGAATGTATAAGAGTAAGCCTTTAGCAGCTCCATTGATGTTAAATCTCTCACTAGGGCTCCTTTTAATAACAATTTGGTCTTGGGTTTTTAAAATTTGTGTTTGTTTTCTTCCAATTCTTTTAGGATGGTTTATATCTTTTCTAAGGAAAGATTTGAATTCTTAGTCAAATTCTAAACAAAAACAAATTTTTTAAAACTATTTTTTCCCCCCAAAGCTTCGCTAGATAACAAAACCAAAAAATCAATAAGTGGAAGTACTGATTTTAAACTTAAAATCAAAATCAGTTGGTTATCGCTTTGGGTTCAACTCCTATGCACAGGGACTTCCCTTCCCTTAAATAGGTTGGTTGAATTAGATATTTAGTTCACAAAATGACTATGTCTGAATTTTCCAAACTCCCCTTTGCAGACTTTTCTCACGATGCCTATGAAAAACTAAATATTCAACTATTATTTTCTCCAACATCTTTGTTGAAATCAGAACTTAACTAAGCAAGACCAAATCAGGCCTTGGGGTCGGAAGGCAGAAAAATAGATGCTTTTACAACGATTACACCTGCTTGGGGGAAGGGAGAACGTAGGGTTCCTTTCTTTAACCACGTCTCCTTCAGTAAGGGACCATACTAAAAATTTCACCTTTTTGGACACTTTCTTCCTTAGAACTCAAGGACACAATTGTACAACCTATAGAACAGATCCTGTTCAAGTAAGGTCATGCACTTTCTTCCTCCAAAAATCTATCAGAACTGCTTCAATGAAACACCATCGCCATTTCCTTTGGTGTTAAGGAAGGAGAAGAAAGATTTAGGTAAGAACGAGCCCATTTAAATCAAACTCCACCATGCCTAAACCCTTGGTCAGAACTGAACACCTTCAAGAAGGTGAGACAGCTCAATCCAAGTGAGTTTTAGATTCCAGCCAGATCAGGCAATTCTTAACCAGTAAAGATACAGATCACCGAAGTTTCTCGTTTGAGGAGGTAATTTTGGTTTTGCTCAAAAAGAGGTGGTAATGTTGGCCATCAATCTGACCAGAAAAAGATTGGGGATCCATTACCAACTTTAATCTTCAACACTTCCTTTATTTTCACTCTTGATTAAAGAATAAAGTTCCTAGGACTTGCTATTGATGCCCAGAGCTCTTAGCTCTTACAGGGAGCCCCCATCTCCAAAGGGGGTCTATTTCCTAAGAGAAGCTCCACTAACGATTTCAAGGTTAAAGCCACATTACTATCCTGCATTTTGCCTGATCTGAGAGGTAATCGTGGCAACCACTTATTTATGTAGCATATATAACCATATTCCTATGACAAATTTGCAGAATAATGCCTATTCAACCCTAATGTGACTATCCTATCTTTTTTGGGATAAGATAATGTGACTATCCTATCAGTATGCAGTATTAAGGGGGGTCAAACGTAATTTTTCTCTTTAGAGACGTGAAATAAGAATTAAAATAAATAAAGAGAACAAAAAAAGTTAGCAATGGTATAGAGAGAAATGCAAACCTGGGCTATGGTGGCCACTCTTTCAGCTAAAACACCATACGCTTGAGATAAATGTCTTGCAGCAGAAGTGTCCATAACTCCGGGGACAACTTTACCACTATGAGTCTTCTTCATGCGTAAATATTGTTGAGCTAAGACAGTAAAATAGGCAGGTTCCCATCCATCTCCACCAGCAAGCCGCAGCTTGTCAGTTACACATTCATTTGTGGGCTTCAGCTTTCCAGACTTTATAGCTGCACTAACAGCATCTTCCGCCATACTGAAACCAATTCCAATCAGAACTATAGTCGTGGTAAAAAGAAAGTGTGAAGACATCGAAGGCAGAAGAAAGGTCAAAGGAAAAAAATGAAAAACAAAAACAGAAAAAAAATGAGTAATAGTACCTCCGATAAGTAGTCCATTTCCCACCAGTAATTGTGACCAATCCCGGATAATCTTCACAAACAACATGATCTCTTGAGATGCTCTCTGTATTTCTAGCTGATGGATCTATAGCCAAAGGACGAATACCACTCCATGCTGAGAGAACATCTGTTCGCCGCACCTAAAAATTTGCAAGGGAATTGAGTCCGGGTCTCTCAAAGAAGACTACCAGAATGGAGGAGGAAATGGAAACAATTTTTATCAAACGCAGGTGAATGTGAAGTTAACTAGAACAACATGAACAACTTTTGAGGTGTCATGAGAACTTAAACATTCAAACGTATGCATAATATTTAAGTTATCCATCAGGCACAATCCCAACCTACACATCTACAGTCCCCTTTGCTGCATCACTATACCAGAAGTCAAAATGATATCACTGACCAACATCCGTTTGAGGTAACTGTTTAGCTTCAAACATCCACTTGATGGAACAGTAAAATAAACAATAGTCGAAGTCATCTTGAACTTATTCTTCACGTGCAAACTTAGGAAGAGATTATTAACCTTGACTTTACTGCCACACAATAGTAAACTAAAGAACCCACACTTAAATCTATTTTAGCCTATTACATGTAAAAGAGGAGCTTTAAAAATTATACTGTGCTAAAATGCGAACCTCTTTTAACATAATATTGAAATTAATAGCGTATACCTTGAAAAGGTTTTTTCTTTTTTCTTTTCTAACATCATCTTTTGCTACTGACTTCAATTGCAACAGAGGTTAAAGGCAAATCTTATTGAAGCAATGTGGAAAGTAGTTACAGGTAAAGAATAAAGGTTGGTGCCAGGACGCGGATATATAGGCTGAAAGAAGAAGACAACTACCATGTTTTTTCTCGTCCAGGAAATTGAGTAAGAACATTTTCAAAATGTTAATTTCCCAAAGGATTCTAAATCAATGTAATTAAGAATGAGAACCAAATATTTTCAAAATGTTAATTTCCCAAAGGATTCTAAATCAATGTAATAAAGAATGAGAACCAAATTAACTTAGGACCCGTTTGGATTGACTTTCTAAGTGTTTAAGTAAGTGCTTATAAGTGCAAAAAAAAAGTGATTATAAACACTTAGAAAGTAAATCCAAACGGGCTCTTAGAATGATTAGATAAGAAGACAAACAATAGACCAACAGACCAACAGACAAAAGGGATAAGACACATGAGTTTTGAACTTCGATGTTCTTACCACAAAGCAGAAAAAAGACGACCTAGTGTAAATTATGGATACAAGGCACAAACATGAATGCAGATAAATACATGGAAATCAGAAAGACCCTAATGAATTATTTCAATTGTTTTAAATCTTAACACGGTTATTCATACAACCAAGTTATATTGAAAAGAAAAGGAAACATCTAATTTTGTACCAAAACCTAGAAAGAAACAGGTGTTAAATGAGCAATCGAATGCCTCTTTTGTGTCAGAATATAAAATCCACATACCTTCACGTTAAGGTAATCAGAAATTGCATCCAGTATAAACTGAATTTCATCCTCGTGTGGCTCAGGAAGCATAGTGATGCCCGTGTTGGAATCTGTGGTTCCAGCAACTGTTCGTCCTAACCATGGCAGCATAAAGACAACACGCCCGTCCTTAGTCTTGGGAACAATTAGACCCATTCCTTCAGGAGAATAATAATCAGGGAGAACGACATGGACACCACTGCTGGGACAGATCATAGACACTGCCTCTTTATCGGCCATCTTTCTCACTGAATCACAAAATGGCCCAGCAGCATTGACAATCACCTTTGCATAGGTATCAAACTCTCTATCTGGTACATTTAAGTATTTAGAGAGGATCAGATAAGTAAAATGATTATATAAGCCAGTCTAGAACTTTAATCATCACTCCGTCACTAGTTTAATTGTGTAATTCCAACTAGCATCTACTGTCATTTATGCCAAATACAAAACCATGTAAAATCTAGTTCCATCTTCCAACAGGAGGTTATTGCAGTGATCTTAAATCAATATAGCAAGTTGATCAACAAAAGATAGTGTTTCAAGGGTTCTAGTCATATATTGAAGATGATCATTTTTCCAAGCCCCTCAACTGATGTCCAATCCTACAACAGTAATTGCCACAAAGCAACAAAAACCAAGAGGGGAAAGAGAATGGGGTAAAGGGTAAAATAAACTCTCTCTGTTTTTTTTTTTTTCTTTAGAGAGAGATTGAACCCTGACAATTCCAATTCCAGTACCCTGTAA

mRNA sequence

ATGACTCAAATTGGTGGTCTTGCACCTGATCACCGGAGCTTGCGATTTGTCCGCCAGGAATTTGATCTACGGTATGCCATTCCTTTCGGCTTTGATCGCGCTGCCATGAACTTTGGAGTTTCTGCCGGAGTTGTTTTTCCTTGGGGAAATGGGTTTTTGAACAAGCCATCATCTCTTCCAGAACGCTTTTTCTTAGGTGGTGATTTCTCTCCCGTATGCACCATTGGAGGCCCCACAACTGTATGGGGATTTAAGACGCGTGGAATGGGACCAACTGAGCCAAGGCGCGAAGTGAGAGATGAAAATAAGGGTGAAAACAATGATTCTCTTGGAAGGGATTTTGTTGGAGGAGATCTTGCAGTCACTGCTTTTGCAGATCTTTCATTTGACCTCCCGATTCGCTGGTTAAGAGAACATGGAATCCACGGACACATATTTGCTGGTGCAGGCAACCTTGCAAAGTTGACAGAGAATGAGTTTCGCAGTTTCTCTTCTCAGAAGTTCATGGAAACATTCCGTACCTCTGTAGGAGTTGGAGTTGTGGTTCCGACAAGACTCTTCCGTCTAGAGGGGAACTTCTACTACATATTGAAGCAACAAGAGCATGATCGTGGAAAAACTGGCTTTCGAGAGAGATTGAACCCTGACAATTCCAATTCCAGTACCCTGTAA

Coding sequence (CDS)

ATGACTCAAATTGGTGGTCTTGCACCTGATCACCGGAGCTTGCGATTTGTCCGCCAGGAATTTGATCTACGGTATGCCATTCCTTTCGGCTTTGATCGCGCTGCCATGAACTTTGGAGTTTCTGCCGGAGTTGTTTTTCCTTGGGGAAATGGGTTTTTGAACAAGCCATCATCTCTTCCAGAACGCTTTTTCTTAGGTGGTGATTTCTCTCCCGTATGCACCATTGGAGGCCCCACAACTGTATGGGGATTTAAGACGCGTGGAATGGGACCAACTGAGCCAAGGCGCGAAGTGAGAGATGAAAATAAGGGTGAAAACAATGATTCTCTTGGAAGGGATTTTGTTGGAGGAGATCTTGCAGTCACTGCTTTTGCAGATCTTTCATTTGACCTCCCGATTCGCTGGTTAAGAGAACATGGAATCCACGGACACATATTTGCTGGTGCAGGCAACCTTGCAAAGTTGACAGAGAATGAGTTTCGCAGTTTCTCTTCTCAGAAGTTCATGGAAACATTCCGTACCTCTGTAGGAGTTGGAGTTGTGGTTCCGACAAGACTCTTCCGTCTAGAGGGGAACTTCTACTACATATTGAAGCAACAAGAGCATGATCGTGGAAAAACTGGCTTTCGAGAGAGATTGAACCCTGACAATTCCAATTCCAGTACCCTGTAA

Protein sequence

MTQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAVTAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVVVPTRLFRLEGNFYYILKQQEHDRGKTGFRERLNPDNSNSSTL

Homology

[Close]

BLAST of Lsi08G007040 vs. ExPASy TrEMBL
Match: A0A5A7T0T1 (Sorting and assembly machinery component 50-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00380 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118
Identity = 205/209 (98.09%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +Q+GGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE
Sbjct: 321 SQVGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 380

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENK ENNDSLGRDFVGGDLAV
Sbjct: 381 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKDENNDSLGRDFVGGDLAV 440

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVGVGVV
Sbjct: 441 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGVV 500

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 501 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 529

[Close]

BLAST of Lsi08G007040 vs. ExPASy TrEMBL
Match: A0A0A0KE64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406550 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 7.8e-118
Identity = 204/209 (97.61%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +Q+GGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE
Sbjct: 321 SQVGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 380

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENK +NNDSLGRDFVGGDLAV
Sbjct: 381 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKDDNNDSLGRDFVGGDLAV 440

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVGVGVV
Sbjct: 441 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGVV 500

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 501 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 529

[Close]

BLAST of Lsi08G007040 vs. ExPASy TrEMBL
Match: A0A1S3C310 (LOW QUALITY PROTEIN: sorting and assembly machinery component 50 homolog OS=Cucumis melo OX=3656 GN=LOC103496447 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.3e-117
Identity = 204/209 (97.61%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +Q+GGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGV FPWGNGFLNKPSSLPE
Sbjct: 321 SQVGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVXFPWGNGFLNKPSSLPE 380

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENK ENNDSLGRDFVGGDLAV
Sbjct: 381 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKDENNDSLGRDFVGGDLAV 440

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVGVGVV
Sbjct: 441 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGVV 500

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 501 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 529

[Close]

BLAST of Lsi08G007040 vs. ExPASy TrEMBL
Match: A0A6J1K1Q1 (sorting and assembly machinery component 50 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111489331 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.1e-116
Identity = 201/209 (96.17%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +QIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVV PWGNGFLNKPSSLPE
Sbjct: 331 SQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPE 390

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKG++ND+LGRDFVGGDLAV
Sbjct: 391 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGKDNDALGRDFVGGDLAV 450

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLP+RWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVGVG+V
Sbjct: 451 TAFADLSFDLPLRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGIV 510

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 511 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 539

[Close]

BLAST of Lsi08G007040 vs. ExPASy TrEMBL
Match: A0A6J1FH45 (sorting and assembly machinery component 50 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111445341 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116
Identity = 201/209 (96.17%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +QIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVV PWGNGFLNKPSSLPE
Sbjct: 331 SQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPE 390

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGE+ND+LGRDFVGGDLAV
Sbjct: 391 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEDNDALGRDFVGGDLAV 450

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLP+RWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKF ETFRTSVGVG+V
Sbjct: 451 TAFADLSFDLPLRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFRETFRTSVGVGIV 510

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 511 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 539

[Close]

BLAST of Lsi08G007040 vs. NCBI nr
Match: KAA0036493.1 (sorting and assembly machinery component 50-like protein [Cucumis melo var. makuwa] >TYJ99993.1 sorting and assembly machinery component 50-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 434.1 bits (1115), Expect = 7.3e-118
Identity = 205/209 (98.09%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +Q+GGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE
Sbjct: 321 SQVGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 380

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENK ENNDSLGRDFVGGDLAV
Sbjct: 381 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKDENNDSLGRDFVGGDLAV 440

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVGVGVV
Sbjct: 441 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGVV 500

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 501 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 529

[Close]

BLAST of Lsi08G007040 vs. NCBI nr
Match: XP_004140074.1 (sorting and assembly machinery component 50 homolog [Cucumis sativus] >KGN47843.1 hypothetical protein Csa_002751 [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 204/209 (97.61%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +Q+GGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE
Sbjct: 321 SQVGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 380

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENK +NNDSLGRDFVGGDLAV
Sbjct: 381 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKDDNNDSLGRDFVGGDLAV 440

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVGVGVV
Sbjct: 441 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGVV 500

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 501 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 529

[Close]

BLAST of Lsi08G007040 vs. NCBI nr
Match: XP_008456518.1 (PREDICTED: LOW QUALITY PROTEIN: sorting and assembly machinery component 50 homolog [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 2.8e-117
Identity = 204/209 (97.61%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +Q+GGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGV FPWGNGFLNKPSSLPE
Sbjct: 321 SQVGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVXFPWGNGFLNKPSSLPE 380

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENK ENNDSLGRDFVGGDLAV
Sbjct: 381 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKDENNDSLGRDFVGGDLAV 440

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVGVGVV
Sbjct: 441 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGVV 500

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 501 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 529

[Close]

BLAST of Lsi08G007040 vs. NCBI nr
Match: XP_023550898.1 (sorting and assembly machinery component 50 homolog B-like [Cucurbita pepo subsp. pepo] >XP_023550899.1 sorting and assembly machinery component 50 homolog B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.6 bits (1106), Expect = 8.0e-117
Identity = 202/209 (96.65%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +QIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVV PWGNGFLNKPSSLPE
Sbjct: 332 SQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPE 391

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGE+ND+LGRDFVGGDLAV
Sbjct: 392 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEDNDALGRDFVGGDLAV 451

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLP+RWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVGVG+V
Sbjct: 452 TAFADLSFDLPLRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGIV 511

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 512 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 540

[Close]

BLAST of Lsi08G007040 vs. NCBI nr
Match: XP_038885406.1 (sorting and assembly machinery component 50 homolog [Benincasa hispida] >XP_038885407.1 sorting and assembly machinery component 50 homolog [Benincasa hispida])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +QIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVV PWGNGFLNKPSSLPE
Sbjct: 330 SQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPE 389

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEN+DSLGRDFVGGDLAV
Sbjct: 390 RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENDDSLGRDFVGGDLAV 449

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFS QKFMETFRTSVG G+V
Sbjct: 450 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGAGIV 509

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGFR 211
           VPTRLFRLEGNFYYILKQQ+HDRGKTGFR
Sbjct: 510 VPTRLFRLEGNFYYILKQQQHDRGKTGFR 538

[Close]

BLAST of Lsi08G007040 vs. TAIR 10
Match: AT5G05520.1 (Outer membrane OMP85 family protein )

HSP 1 Score: 311.6 bits (797), Expect = 5.1e-85
Identity = 135/208 (64.90%), Postives = 179/208 (86.06%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +QIGGLAPD R+LRF+RQE DLRYA+P GF RAA+NFG++ G+ FPWG+G+ ++ S +PE
Sbjct: 312 SQIGGLAPDSRTLRFLRQEIDLRYAVPLGFYRAALNFGIAGGITFPWGSGYKSRASCVPE 371

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGG+ SPVC++GGP+ +WGFKTRG+GP EPRREV+D+   E+ D+  RDFVGGD+AV
Sbjct: 372 RFFLGGNISPVCSLGGPSALWGFKTRGLGPNEPRREVQDD---ESGDTYERDFVGGDVAV 431

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFD P++W R+ GIHGH+FA AGN+A+L+EN++R+F++ K +ETFR+SVG G+V
Sbjct: 432 TAFADLSFDFPLKWFRDRGIHGHVFACAGNMAELSENKYRNFTAPKLLETFRSSVGAGIV 491

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTGF 210
           VPT LFR+E N+ +ILK+QEHDR K+GF
Sbjct: 492 VPTSLFRMELNYCHILKKQEHDRAKSGF 516

[Close]

BLAST of Lsi08G007040 vs. TAIR 10
Match: AT3G11070.1 (Outer membrane OMP85 family protein )

HSP 1 Score: 309.7 bits (792), Expect = 1.9e-84
Identity = 141/207 (68.12%), Postives = 177/207 (85.51%), Query Frame = 0


Query: 2   TQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPE 61
           +QIGGLAPD RSLRF++QE DLRYA+PFGF  AA+NFGVS GV FPWG+G+ N+PSS+PE
Sbjct: 315 SQIGGLAPDSRSLRFLKQEVDLRYAVPFGFYNAAINFGVSGGVSFPWGSGYQNRPSSIPE 374

Query: 62  RFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGENNDSLGRDFVGGDLAV 121
           RFFLGG+ SPVC++ GP+ +WGFKTRG+GP+EP+R      KG++     RDFVGGD AV
Sbjct: 375 RFFLGGNSSPVCSLSGPSALWGFKTRGVGPSEPKR------KGDSE----RDFVGGDAAV 434

Query: 122 TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSSQKFMETFRTSVGVGVV 181
           TAFADLSFDLP+RWLRE GIHGH+FA AGN+AKL+ENEFR+F++ KF+ETFRTSVG G+V
Sbjct: 435 TAFADLSFDLPVRWLRERGIHGHVFACAGNMAKLSENEFRNFTAPKFLETFRTSVGAGIV 494

Query: 182 VPTRLFRLEGNFYYILKQQEHDRGKTG 209
           +PT LFR+E N+ +ILK+QEHD+ ++G
Sbjct: 495 LPTSLFRMELNYCHILKKQEHDQARSG 511

The following BLAST results are available for this feature:

BLAST of Lsi08G007040 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G007040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0T1	3.5e-118	98.09	Sorting and assembly machinery component 50-like protein OS=Cucumis melo var. ma...	[more]
A0A0A0KE64	7.8e-118	97.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406550 PE=4 SV=1	[more]
A0A1S3C310	1.3e-117	97.61	LOW QUALITY PROTEIN: sorting and assembly machinery component 50 homolog OS=Cucu...	[more]
A0A6J1K1Q1	1.1e-116	96.17	sorting and assembly machinery component 50 homolog B-like OS=Cucurbita maxima O...	[more]
A0A6J1FH45	1.9e-116	96.17	sorting and assembly machinery component 50 homolog B-like OS=Cucurbita moschata...	[more]

BLAST of Lsi08G007040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036493.1	7.3e-118	98.09	sorting and assembly machinery component 50-like protein [Cucumis melo var. maku...	[more]
XP_004140074.1	1.6e-117	97.61	sorting and assembly machinery component 50 homolog [Cucumis sativus] >KGN47843....	[more]
XP_008456518.1	2.8e-117	97.61	PREDICTED: LOW QUALITY PROTEIN: sorting and assembly machinery component 50 homo...	[more]
XP_023550898.1	8.0e-117	96.65	sorting and assembly machinery component 50 homolog B-like [Cucurbita pepo subsp...	[more]
XP_038885406.1	1.4e-116	96.65	sorting and assembly machinery component 50 homolog [Benincasa hispida] >XP_0388...	[more]

BLAST of Lsi08G007040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05520.1	5.1e-85	64.90	Outer membrane OMP85 family protein	[more]
AT3G11070.1	1.9e-84	68.12	Outer membrane OMP85 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000184	Bacterial surface antigen (D15)	PFAM	PF01103	Omp85	coord: 14..210 e-value: 8.1E-16 score: 58.4
None	No IPR available	GENE3D	2.40.160.50	membrane protein fhac: a member of the omp85/tpsb transporter family	coord: 2..210 e-value: 3.0E-24 score: 88.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..108
None	No IPR available	PANTHER	PTHR12815:SF38	OUTER MEMBRANE OMP85 FAMILY PROTEIN	coord: 2..209
IPR039910	Surface antigen D15-like	PANTHER	PTHR12815	SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER	coord: 2..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G007040.1	Lsi08G007040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045040	protein insertion into mitochondrial outer membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009527	plastid outer membrane
cellular_component	GO:0001401	SAM complex
cellular_component	GO:0019867	outer membrane