Lsi08G006690 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTATTTTCATATAAAAATTTTACTGTAACGATGGTGATTTGTAGACAGTGAAAATTTTACTATTAAATAGTTTGATATTTTTTCTACTTATAATAATTTCTCTTTCCTTTTCCTTTCTATATTTATTTATATATATTCAATTGATGGTCACTTGCCGTATCATCAGCTGCTGTCTTGCAGCTTGCGGCTGTGTAATTGCCACCATGAGCCTCTTGATTCTTGGCAGCCGTGACTGGATTACGACCACCGCGGTCGTTCCTTCGCTCTCCGGTGAGCTCAGACAGCCTCGGATTCTACCTTTCCGAACTCTCCACCGTACACCGCCGGCGTTCAGGATTCCATCTTTCTCCTCTAGCTGCGTTTCGCCTCCTCAAGCTGTTTCCAGCGATGTTTTGCATGATGCCGGCGCGACGGCGGCTGTCCTCGTCGGCGCCTACTCGCTTGTTCGCGGATTCGACACTCTCACCCGGCGGAATTTGATTCAACAGGTTCGTCGTCGAATTCATTCTCTTCCTCGATTGCATATGCAACTTATTTTGGTGATAGTACTGATCCAATTATATGCGCGCGAGTCGAGATCTGGATACTACGTTCGCAATTAGTTAATTAGGCAAAACGATATGTATATTTTAGTATGTGCCTTAGAAAGGTATATTTCGATTTCCACAAATGGAAGAGGGTGGACTGTAATGGAGAAATGCATTTCCGGTTTTCCTTTCTCAAAATGAAAGTGGAACCAAATTTTATTGGAAGCCGCTAACCTAAATAAGGAAATTCTGGCAAGATTTTCTACATTTTGAGTTAATCGAAAACCTTAAGTTTCTCGCTTGCTTTGGTAGATTAATTTGAGTGTATACAGGAACTGCATATAAGTAGTAAGTAGTTCATAGCAAGTAGGAACTATGTACAGAACCTGAATCAGGTAATTTTACAAAAGTAGAATCATCCCATAGCCCTTTTGAAATGTTTTGGAACCATTACTGCTAAGGTACCTGTTCGGTTTTAAGTATCTTCCTCTTAGTTTTGATCTTCAAGGGTTTACACTTGGCGTTAATGGATCTGTTCAGGGCCATTTAGTTCCCACTTTCTTTGTAGTTCATTAACATTTGGGTTTCAGTTGATAATCAGATTTTCTTTGATCTACTTCCTCCTGGCCCTGTATTTAATGTTCTGTTTATTGGGTTTCAGGGAAGTCGATTACAATTGTATTGGATATCAATTCTTTTATAATACCAACAAGAAATTTATCACTCCTCTCTGCACATAAACTAAGTTTCATTTTTATTTAAGTAGTTCCTTAGTTTTGTGGCCATGGAGGAAATAAATATTAGTTACATGAAAGAGGAGGAAAATCTGATAGAAACTATTGTGTTCTTTGTTCTGATCATGAATAACATCAATATTACTCTCTCTGGCCTTCAATGAAACAGAATTTGAGCAGAAAACTTGTCCACATATTGTCCGGATTGCTTTTCACAATGTCTTGGCCTATATTCAGGTAATTCTAAGCTTGTTTTCCTTTGCATAGAAGTTACTCGCATCATTTATTTTGCATACCAATGATTTAAATCTGGGTATTTCTCTTTCTCACCCACTTCAGTTTATCGTTTTAATTCTAGAATAGCACCTCAACAGAGGCTCGCTACTTCGCTTCAATAGTTCCTACTATGAATTGCTTGAGGCTTGTCATCAATGGCCTCTCATTAACCAAAGATGAAGGACTTTTGAAATCGCTTACTCGGGAAGGAAAACCAGAGTAAAGTTCCATCTACTAAAACCCTTTTCAGAATCCCCTAAATCCCTTAAATTATATGTACCTCAATTATAACCCCTTTAATCAAAATCTACAGGGAATTGCTGAGAGGCCCTCTATATTATGTTCTAATACTGATTTTGTCAGCTGTTGTCTTCTGGCGTGAATCTCCAGTTGGTTTGATCTCATTGGGAATGATGTGTGGAGGAGATGGTAAAATTTTAACCTTCTTTAAATATCTTCCCATTACTACTTCTATTTATATAACTCCTAATTTTTGTTGAGTTAACTGCAGGTATTGCTGATATAATGGGAAGAAAATTTGGGTCCAAAAGGCTTCCTTATAATCAGGGGAAGAGTTGGATTGGTAGCATATCAATGTTTATCCTTGGATTCTGTGTCTCCATCGGGTGAGTTCTTCTTGCCTTTCTTTCTTTTCCTCAAAATATCCACTTAAATTAAAAACACTACTTGCTATTCTTGAGCTTGATATTTGTGAAAGTAATTTTGAGAAATGCTTGGTTGTTATGTGTGTAGAATGTTGTACTATTACTCAGTTCTTGGATATTTGGAGTTGGATTGGGGAAAGGCATTGCAAAAAGTTGCTTTGGTTTCTCTGGTGGCAACTGTGGTGGAATCTCTTCCAATTGCAAATGTTGTAGATGATAATATATCAGTACCACTGGTCACTATGGCAGTAGCCTTTATGACTTTCAGTCTTTAGTATTATGGACTTTTCCCATCTTTCCATCACACTTACTCTTGCCAGCTCTGTAAAGTCATTTTTCCTTTCTCTCTCATTCAAATTTACTTAGATATTTTAAATCATTTTTAAAAGAGACGGTTGCAAATATAGCAATCAAATTTAAAGTATTAGAATATATAGCAACATTTTAAAAAAATTGCAAATATAGCAAAATCTATCCGTGATAGACTTTCATTGTTGATGGACTTTTATGGTCTAGGTGGTCTACCACTGATAGATCGATCATAAGAGTCTATCAGTGATAGATAGATTTTGCTGTATTTGCAATTTCTAAAATAGATACTATTACAATTACTTTTTTAAAAATTAAAACTAGGTAAGGTTACATATTTTTATTTAAAATTATATATAAATGCCCCATCTTTTTTAGAAATAATAACAAAATTTACCCATAAATTTAGTATAGTCTAGAAGTGCCTAGCTTTTATCTCCAACTTTGGAAATTTAGCCTTAATTTAAGGCAGGGCTGCAATTGTTTTAAAAAAGAAAAAAAATAAAAGCAAAATTTAATGAAAATTAAGTTTTGTACTTGATAAGGATCTAAGATTGTCAGTCCATGAATTCAAAAGGGATAATACTTTGATCTATCTCACTTATTTCTATGATTTCTCTTCTTATTATTCACACCAAAAAATAATTAAGAAATTTACGAGAAGACAATTTTGTAGGATGTACAAATATAGATACTTCACGGTAGGGGTGTAAGTCATAATCGTTCAAGCCAGCCAAAACTGCCGTCACGGTGCGGTGGCAGGATTCGGTTGGGGGTTTGTTTCGCCATTTATTATTAAAGCTGAAAACCTCACTCGCGATCGCCATGGCTATATTCCTCCGCCATCAGCCACCACTGACACTACAATTTCGTCAAATTTGTTTTAGAAGTTCAACTTGGTACTTGAAATTAAAATGGAAATCGGACGCCGGACTCAAGGGACTAGGGAGTAGGGACTGGGGGACTGACCGACATGAGATGACAATTGATACTAGAGTGAGTCTAGACAATACATGTTACCTGTAAAAGACAAAGTGTATAAATTGTGCTGTATAATAATAAATAGAGTAAATTACTTGGTCAATACATTGTAAGATACAGATTTATTTGGTACTTGAGTTATTGAAATTTATATTTTTATGAGAAATAGATTTAAGAGACAGGTGT ATTATTTTCATATAAAAATTTTACTGTAACGATGGTGATTTGTAGACAGTGAAAATTTTACTATTAAATAGTTTGATATTTTTTCTACTTATAATAATTTCTCTTTCCTTTTCCTTTCTATATTTATTTATATATATTCAATTGATGGTCACTTGCCGTATCATCAGCTGCTGTCTTGCAGCTTGCGGCTGTGTAATTGCCACCATGAGCCTCTTGATTCTTGGCAGCCGTGACTGGATTACGACCACCGCGGTCGTTCCTTCGCTCTCCGGTGAGCTCAGACAGCCTCGGATTCTACCTTTCCGAACTCTCCACCGTACACCGCCGGCGTTCAGGATTCCATCTTTCTCCTCTAGCTGCGTTTCGCCTCCTCAAGCTGTTTCCAGCGATGTTTTGCATGATGCCGGCGCGACGGCGGCTGTCCTCGTCGGCGCCTACTCGCTTGTTCGCGGATTCGACACTCTCACCCGGCGGAATTTGATTCAACAGAATAGCACCTCAACAGAGGCTCGCTACTTCGCTTCAATAGTTCCTACTATGAATTGCTTGAGGCTTGTCATCAATGGCCTCTCATTAACCAAAGATGAAGGACTTTTGAAATCGCTTACTCGGGAAGGAAAACCAGAGGAATTGCTGAGAGGCCCTCTATATTATGTTCTAATACTGATTTTGTCAGCTGTTGTCTTCTGGCGTGAATCTCCAGTTGGTTTGATCTCATTGGGAATGATGTGTGGAGGAGATGGTATTGCTGATATAATGGGAAGAAAATTTGGGTCCAAAAGGCTTCCTTATAATCAGGGGAAGAGTTGGATTGGTAGCATATCAATGTTTATCCTTGGATTCTGTGTCTCCATCGGAATGTTGTACTATTACTCAGTTCTTGGATATTTGGAGTTGGATTGGGGAAAGGCATTGCAAAAAGTTGCTTTGGTTTCTCTGGTGGCAACTGTGGTGGAATCTCTTCCAATTGCAAATGTTGTAGATGATAATATATCAGTACCACTGGTCACTATGGCAGTAGCCTTTATGACTTTCAGTCTTTAGTATTATGGACTTTTCCCATCTTTCCATCACACTTACTCTTGCCAGCTCTGTAAAGTCATTTTTCCTTTCTCTCTCATTCAAATTTACTTAGATATTTTAAATCATTTTTAAAAGAGACGGTTGCAAATATAGCAATCAAATTTAAAGTATTAGAATATATAGCAACATTTTAAAAAAATTGCAAATATAGCAAAATCTATCCGTGATAGACTTTCATTGTTGATGGACTTTTATGGTCTAGGTGGTCTACCACTGATAGATCGATCATAAGAGTCTATCAGTGATAGATAGATTTTGCTGTATTTGCAATTTCTAAAATAGATACTATTACAATTACTTTTTTAAAAATTAAAACTAGGTAAGGTTACATATTTTTATTTAAAATTATATATAAATGCCCCATCTTTTTTAGAAATAATAACAAAATTTACCCATAAATTTAGTATAGTCTAGAAGTGCCTAGCTTTTATCTCCAACTTTGGAAATTTAGCCTTAATTTAAGGCAGGGCTGCAATTGTTTTAAAAAAGAAAAAAAATAAAAGCAAAATTTAATGAAAATTAAGTTTTGTACTTGATAAGGATCTAAGATTGTCAGTCCATGAATTCAAAAGGGATAATACTTTGATCTATCTCACTTATTTCTATGATTTCTCTTCTTATTATTCACACCAAAAAATAATTAAGAAATTTACGAGAAGACAATTTTGTAGGATGTACAAATATAGATACTTCACGGTAGGGGTGTAAGTCATAATCGTTCAAGCCAGCCAAAACTGCCGTCACGGTGCGGTGGCAGGATTCGGTTGGGGGTTTGTTTCGCCATTTATTATTAAAGCTGAAAACCTCACTCGCGATCGCCATGGCTATATTCCTCCGCCATCAGCCACCACTGACACTACAATTTCGTCAAATTTGTTTTAGAAGTTCAACTTGGTACTTGAAATTAAAATGGAAATCGGACGCCGGACTCAAGGGACTAGGGAGTAGGGACTGGGGGACTGACCGACATGAGATGACAATTGATACTAGAGTGAGTCTAGACAATACATGTTACCTGTAAAAGACAAAGTGTATAAATTGTGCTGTATAATAATAAATAGAGTAAATTACTTGGTCAATACATTGTAAGATACAGATTTATTTGGTACTTGAGTTATTGAAATTTATATTTTTATGAGAAATAGATTTAAGAGACAGGTGT ATGGTCACTTGCCGTATCATCAGCTGCTGTCTTGCAGCTTGCGGCTGTGTAATTGCCACCATGAGCCTCTTGATTCTTGGCAGCCGTGACTGGATTACGACCACCGCGGTCGTTCCTTCGCTCTCCGGTGAGCTCAGACAGCCTCGGATTCTACCTTTCCGAACTCTCCACCGTACACCGCCGGCGTTCAGGATTCCATCTTTCTCCTCTAGCTGCGTTTCGCCTCCTCAAGCTGTTTCCAGCGATGTTTTGCATGATGCCGGCGCGACGGCGGCTGTCCTCGTCGGCGCCTACTCGCTTGTTCGCGGATTCGACACTCTCACCCGGCGGAATTTGATTCAACAGAATAGCACCTCAACAGAGGCTCGCTACTTCGCTTCAATAGTTCCTACTATGAATTGCTTGAGGCTTGTCATCAATGGCCTCTCATTAACCAAAGATGAAGGACTTTTGAAATCGCTTACTCGGGAAGGAAAACCAGAGGAATTGCTGAGAGGCCCTCTATATTATGTTCTAATACTGATTTTGTCAGCTGTTGTCTTCTGGCGTGAATCTCCAGTTGGTTTGATCTCATTGGGAATGATGTGTGGAGGAGATGGTATTGCTGATATAATGGGAAGAAAATTTGGGTCCAAAAGGCTTCCTTATAATCAGGGGAAGAGTTGGATTGGTAGCATATCAATGTTTATCCTTGGATTCTGTGTCTCCATCGGAATGTTGTACTATTACTCAGTTCTTGGATATTTGGAGTTGGATTGGGGAAAGGCATTGCAAAAAGTTGCTTTGGTTTCTCTGGTGGCAACTGTGGTGGAATCTCTTCCAATTGCAAATGTTGTAGATGATAATATATCAGTACCACTGGTCACTATGGCAGTAGCCTTTATGACTTTCAGTCTTTAG MVTCRIISCCLAACGCVIATMSLLILGSRDWITTTAVVPSLSGELRQPRILPFRTLHRTPPAFRIPSFSSSCVSPPQAVSSDVLHDAGATAAVLVGAYSLVRGFDTLTRRNLIQQNSTSTEARYFASIVPTMNCLRLVINGLSLTKDEGLLKSLTREGKPEELLRGPLYYVLILILSAVVFWRESPVGLISLGMMCGGDGIADIMGRKFGSKRLPYNQGKSWIGSISMFILGFCVSIGMLYYYSVLGYLELDWGKALQKVALVSLVATVVESLPIANVVDDNISVPLVTMAVAFMTFSL Homology
BLAST of Lsi08G006690 vs. ExPASy Swiss-Prot
Match: Q2N2K1 (Probable phytol kinase 1, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 6.4e-80 Identity = 164/289 (56.75%), Postives = 201/289 (69.55%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy Swiss-Prot
Match: Q9LZ76 (Phytol kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE5 PE=1 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 6.2e-75 Identity = 150/248 (60.48%), Postives = 187/248 (75.40%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy Swiss-Prot
Match: Q7XR51 (Probable phytol kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0670700 PE=2 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 6.0e-70 Identity = 136/235 (57.87%), Postives = 172/235 (73.19%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy Swiss-Prot
Match: Q2N2K4 (Probable phytol kinase, chloroplastic OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.3e-69 Identity = 149/295 (50.51%), Postives = 193/295 (65.42%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy Swiss-Prot
Match: Q2N2K3 (Probable phytol kinase, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 4.3e-68 Identity = 142/290 (48.97%), Postives = 186/290 (64.14%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy TrEMBL
Match: A0A5D3CII7 (Putative phytol kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00500 PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.3e-128 Identity = 253/299 (84.62%), Postives = 262/299 (87.63%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy TrEMBL
Match: A0A1S3C4T7 (probable phytol kinase 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496482 PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.3e-128 Identity = 253/299 (84.62%), Postives = 262/299 (87.63%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy TrEMBL
Match: A0A0A0LMM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G385070 PE=3 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.3e-127 Identity = 247/298 (82.89%), Postives = 260/298 (87.25%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy TrEMBL
Match: A0A6J1H170 (phytol kinase 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111459441 PE=3 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 2.2e-115 Identity = 234/311 (75.24%), Postives = 257/311 (82.64%), Query Frame = 0
BLAST of Lsi08G006690 vs. ExPASy TrEMBL
Match: A0A6J1JIM6 (phytol kinase 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487279 PE=3 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 1.9e-114 Identity = 231/311 (74.28%), Postives = 256/311 (82.32%), Query Frame = 0
BLAST of Lsi08G006690 vs. NCBI nr
Match: XP_038884259.1 (probable phytol kinase 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 488.0 bits (1255), Expect = 5.7e-134 Identity = 258/300 (86.00%), Postives = 268/300 (89.33%), Query Frame = 0
BLAST of Lsi08G006690 vs. NCBI nr
Match: XP_008456566.1 (PREDICTED: probable phytol kinase 1, chloroplastic isoform X1 [Cucumis melo] >TYK11733.1 putative phytol kinase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 468.4 bits (1204), Expect = 4.7e-128 Identity = 253/299 (84.62%), Postives = 262/299 (87.63%), Query Frame = 0
BLAST of Lsi08G006690 vs. NCBI nr
Match: XP_011649863.1 (probable phytol kinase 1, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 464.5 bits (1194), Expect = 6.7e-127 Identity = 247/298 (82.89%), Postives = 260/298 (87.25%), Query Frame = 0
BLAST of Lsi08G006690 vs. NCBI nr
Match: XP_031737375.1 (probable phytol kinase 1, chloroplastic isoform X4 [Cucumis sativus]) HSP 1 Score: 455.3 bits (1170), Expect = 4.1e-124 Identity = 242/291 (83.16%), Postives = 254/291 (87.29%), Query Frame = 0
BLAST of Lsi08G006690 vs. NCBI nr
Match: XP_031737374.1 (probable phytol kinase 1, chloroplastic isoform X3 [Cucumis sativus] >KAE8652226.1 hypothetical protein Csa_022182 [Cucumis sativus]) HSP 1 Score: 452.2 bits (1162), Expect = 3.5e-123 Identity = 240/288 (83.33%), Postives = 251/288 (87.15%), Query Frame = 0
BLAST of Lsi08G006690 vs. TAIR 10
Match: AT5G04490.1 (vitamin E pathway gene 5 ) HSP 1 Score: 282.3 bits (721), Expect = 4.4e-76 Identity = 150/248 (60.48%), Postives = 187/248 (75.40%), Query Frame = 0
BLAST of Lsi08G006690 vs. TAIR 10
Match: AT5G58560.1 (Phosphatidate cytidylyltransferase family protein ) HSP 1 Score: 163.3 bits (412), Expect = 3.0e-40 Identity = 98/282 (34.75%), Postives = 156/282 (55.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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