Lsi08G005930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G005930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	tRNA pseudouridine(38/39) synthase
Location	chr08: 14218645 .. 14236512 (+)
RNA-Seq Expression	Lsi08G005930
Synteny	Lsi08G005930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAAGGTCGGGGGAGGGGGGTGGGGTCAACCTCTTCCCGACAAAGGCAACATGGGGGTTGGTCCCTTTGACCTGAGATCGAGGTGAGGTCGGCTTATTCCAACTAAACTTAAGTGAGATCAACCCATTACTCAATTCGCTCCCTCTCTGCCCAAATGTCTTCAATCTTCCAAGTGTTCACACTATTCACATTATAAAATACTAATACAAACGAACCAATCTCAATATAGTTGAGTTTGACGAGACATTATATTGTTTACTAGAGAGTACAAATTTTGAAATATCATATCGAAGACAAATAAGACTTTAAAAAATGCGCAAAAAAATAAAAATAGACAGTAGAGGTGTAAATTTGAAACTACAATATGAATAAAAGAACAAAATATATTTTTTAATAGAGAAAAAATGAAAAAAAAAAAAAAAAAAAATTCCTAGATGCACCATGGTCAATGTATTAAAAGCAAGGGAAATTTGTGATGGTCTTTATAGTCTTACTTTCCTCATTCATCATATCATTGTTAAGTCTGACTACCTATAAGTAGTTAACTAATGTTTTTTCATGTCGAGTGCATTAAAAGAACAAACTTCTACTCTTATTCCAACCTGTTATTATGTAATAGTTTGTTTTGGAGATGTTTTCTAAAAAGAAAAAAAAAAATAGGAGAAAAAAGAAAGAGAAAAAGAGAGAGATAGTCTAAATGGGCCGTGGGATATTCAGGCCCAAAATCCGATCTGGATATGTTCATAACGTGGGCTTCTAAACAAAATTGGGCCTTGAGCTTAAGCCCACGATGGATACGGGCACATAGTCCGGTACGCGTTGCGTAGATCGTCCGTGCATACTGCCTCTATAAATACATTCCCGCCTTCTGTAATAGCTTCAAGAACTTCAATTAATCTGTTTCCTCTCGTCTTCAACCTCTGAATCTCAGTTTTCAGAGAAACGTCTTTGATAGGGTTTTTAGGGATTCTAGGGTTTGTTTCGTGCTTTGATGCAATCTGGTGTGATACGATCTGCAGCATTTGCTCACTGCAGTAACGGCGTGTTTCTTCTGTCTTGCTAGAAGCTTTCGTATGTGTTATCGCATTGTTTCTCTGTATCTCGTCTTCGACTCTAATTTGACTCGCGATGAATTCCGATTTTTGTCTGAACTTTGGGGCTTTATTACCTCTCTTGCAGTGGCCGTCTGAAATTTGGGGCTGTATTTCTTGACGTACACAATGGTTAATGGACAGAGTGGAACATTCCCTTGATCATAGAGAAACTGCCGGAGCAATCGGGATGATTTCAGGAGCTAACGAGTTTCAGCCATTGGAGGAAAACCTAATTGTCAGTCTTCAATCCCAGCTTCGTTTTCTCCAAGGCAGGGTTAAGGTTTGACCGTCTTCTCTCATTTCAACTTCCGTTTGGTTAATGACATAGTGGCGAAGTATTGGGAGAGCCATGACAGATGTTCGATCTCAATCCACTAATCTGACAGGAATTGGAGGAGGAAAATTTGAAGCTATCCTCTCGACTTGCTAGTTGCCGCTGTTCTGAGGTTTGGTCGACTATATTAGAATGAAATCAGAGCTATTTGGTTCTCATGCCGGCCTAGCTAGCCGTATGGTAGACTTTTCGTCAGGGCTAACTAAACATGAATTCGTGCAGAGGAGGATAAACTTTGACGACGGGAGTAGATCGATTGAGAAAAGCAAGGAATCTGGCACTACTAAGAAGAAAACAGTAGAAAAAACTCCAGGCTAGTCATTACTTTATGACCAAATAGAGTCTGTTTGTTTACTCCTCCATATTTGCACACACATATATATATTGGAAATAAGAGGATATCCATGGTAGCATGGTGGAGCAGTAGTAGCTCACATGTATATACGACTAGGAACGCACTTTCATATCTTGTAATGTAATGAGATTATTATGAAATTCAAGATTAAGAGATGATGATTTGTGAGTCCGAACTATAGTCCAATTATGCATTAGCAGATGACGAAATATTCAATGAGGCCGGTACAATGTGTCGGCCTCACCAAATAACTTTCATGTCCCTAATAATCCTACGACACAGAGTAAAAAGTGAAAAATGATGCAACTCAGTCTAAAAATGGCAAGCCTATTTTTTCTTTTTTGCAAAATTTTTAAAATTTATTTTACGAGCAACAGACGTTTGGAATGTTTATGAAATTTAGATGAAATAATTTACGGTAGTTTCATGCATATTATCAACCTTGTTTATAATATATCACAAGAGTCATATTCCATGTTTCTTTTGCGAGGATTATCTTCTGGAATGATTTGGTTGTTTCTACTCTCAAATTTAATTATTTTATGGGTGAAGGTTATAACACAATGATCTTGGAGCACTGTTCGAAGAGATATATTGCTCTAAAAATAATGTATTTCGGGCAGAGGTATGTAATCTTGTCATAATGGGAACAAGACCAGTGTCTTTTAAGTTTTACTTTCCCCTGCTAATTTTCCGTACATCATAGTCCTCCAGTAACTTCTTCTGAAGTAAGGAGAAATCTTATTTAAAAAAGGAAAAAGAAAAAACAAACAAACAAAAGAAGAATCAAAACAAGTTGTCACTAAAACTATTCTGTCTTTGTTGCTCTTTTGATATTGCGAAAATTCAACTTTGTATCAAATAATGCCTGAAGTTCTGGTTACATCATCTGTACAGGTTCTACGGTTTTGCTTCAGAGGCACAAATGGAACCAACAGTTGAAGTACAGTTTCAAATTCAGCTTCTTAAATCTTAACAAATTATTTATGATTTTTCAATTACATTGGTACTGGTGGGAAATGTCAAGATCAAGAACGCACGATATTGGTTCTCAATGTTTACTGGGAGTGCCTAAACATTTAATAATGCATTTAGAGGATCATAATATCAATTTTTTTTCACCTTCCATCTTTTCTAATTGATATTTGATCACACCATCTGTTAGAACTCATCATGCAACTCTCAAAAGTAAATATAAGGTTTTCTTTGTCAACAAATACTCTTCCGCTCCTGCTTGCTAAGGAATAACATTGATATTATTTTGATGCTGTGCTTAATTATGGATTTGGATTATAATTAATAATGCTAGAAAACACAATCAACAATGATTTTGGTCCTTCTGATCAGTAGCATGAGTTTGAGTCATAAATCTCATAAGCATGAATTAAGGGGAGGGGGGGGGGGGGTCAATTAGTTTGTTATGGAAATAATGAGAATGCTAAGGGGGTGTCAACATAGTTGAGATTCCCGTGTACATCTCTTGATCCCTATTTTCGCTATTTGTTTCTTCTCGTATCTACTTTGTACTTTGAGCATTAGTCTCATTTTATTAATTCAATGAAGAGGCTGGTTTCCATTTCAAAAAAAAAAAAAAATCTCTTAAGCATGAATTATGAGGTAACCAGACTCCCAAGATTTCAGAGGCTTTGGATGTCTCCTGAGTTTCACTCCAGTAATAGTAATTAGCCCCTCTGACCTTCACCCTTGCAATTCCTTCTTACAGCCACCCTCTCTTCACCTTTCCCTCTCTTTTGTGATTCTCTTGCGATCCCAAAAGAAAACAAGAGGATTAAGAGATAGATGGAGCCAAAGGTGAACTAAAAAGAGAAGGAATAGTCACTGGAAAAGACTTTTGATAGGGTTGATTGGGACATTTGGATACTATATAAAAGTTGAAAGGCTAAGGCAATAGACGAGCATGACTTCATGGTTGGGTGTTACATTTCACATCAATTTGTTTAAGGGAGGGGGTAATGGTAGATATGGTGGTTGTGAGGAATGTTGGGCGAGAAGAAATTTAATTGTTAATTTTTTTATCCATGGATTAATTGTCAATTTGTTATCTCATCTTCCTGCAGTCTGAAATTTTCAGAGCTCTTGAGAAAGCCAGGCTTCTTGGTGTTGGTAGGAAGGAGTCTTGTTATTCAAGATGTGGGAGAACGGACAGGGGAGTCTCATCTGTCGGACAAGTAAGACGTTTCAAATCTGTAGGGAATAACATTGTATGGCTAGAATAACATTGTACGGCTAGAATAACATTGTATAATGATAATGTTATGCTTGTTTCCTGAATACTGAATTAATTCACTTTTGGTTTTCCATTAGCCGTTCAAAATGACATTTCCTGCCACCTCTTACACGTCCTTGGGGGGTTTGGTTGAGGTGTGGAATGGAAACGGAAATCTAATGATACCTCTTTTATGTAGTTGACTAGGACTGTCTTGTAATGTTCTTTATGTGTCCCTCGTTTGTACGAACGCACGAAAAACACATGAAAATATTGCTGAAAAAGCTTAATATTTTTAATATGAAAACCAAAGAGATGAAGATGGACAACATAATTCTTTTAGTTATTTGGGTTTTTCTTCTATGGATTTATTATTATAATTATCAAGGCTACAGTTCGTTGTCCAAATTTGGCTTTTAATTTAAATTTATATTACAAATGCTTTTCTGGTTCCGTAAGTCATTAGTCACCCAGTAGTCAGAGAATCAGAATTAATTGGGCAACTTTGTTGACCTTCCAATCATCATTTGACTTAATTTCCCCTTTCTTAGCATTCACATCACACTATCGTTCCTGCAGGTAATTTCTCTCTATTTGCGGTCAAACCTTAAGGATCCCCCTAATGGTGAAAATAGTGATCATAATGAGGAGCAACATGGTCAGCCAAGTTGATGTTGCCAAAGTTGTTATCTGTTGTTAATACCTTGCATGCTGAATCATTCTAATGAGCTGAGTGATGACATTGAGTGGGTCATATTTTTTGCTTTCTGTTTTACATGGATGTATTTGACTATTTTAATAGTTGATAGATTTTCATAGCATTAAGTTACTGCAAATGATACAAACTATGTTTTAGTTTACTGTTTTTCCCAAAAATTTAGACTGTCATTTAAAGCATTTTTCTCTAATTAGCTTTACTATAGGGTGATAATATCTCTTTCAACAAGTGTTAACGTTCACATCACCTACTATCTCTTTGCGTTGCTAAACATAACTTTTAATGTTATCTTATTGTAACAAATTAGTTTATGTACAAGCAGACAATTAAGAGCAAAAATCATTCTCGTTGATTCTGTCCTGTTTACATTTGTGTATAGTATTTTAGATAATGGTGGCTCCATTGTCTGATTTTTGTTAGAAATATAAAATATCAATGGAAGAGCCTTCAAAGAATGATAGATTTGATAATGATGGCATTCTTGTTTGAAACTTCAAAATATAACAGAGTCTTTACTGCATTAGGAAAGGAAAGTAGATGGTAGCAAGACCGTATATAGGGAACTGCAGACATATATATATATATAAATAAAAATGTGATCTATTGTTTCATGTGCTTATTTTTTCTGAATTTCATATTCTATAGGGGTAGGTTCTTTTGTGTTCTAATTGGAGTGTTGCATGCTTTTTCCATCTCTGTTATCTTAATTTCACTTTCTTTATTATTTATTCTCAGATGGAGAAATTGATTATGTGAGAGTAATTAATAGAGTCCTTCCTAGTGACATTCGGGTGTTAGGCTGGTGTACTGTTCCTATTGGCTTCAGTGCAAGGTTTGTCTTGCTCTTGTGATTTTTTATAGATTTATTTATTTCCCTTTGGCCTGTTCTTGTGAGCGATGTGTTGTGTAGTTTTTTAATGGGAATTTAGGATCACGAAACCAGCATCCAGCAGATTTAAAAATCAATCTAACTGGCTTTGACTGCAGAGCTGATGTGCCTACATGAAATTTTGAACATAGCCGGGTGCTATGCTTTAACCTTCTAAATGTCAATACACCTCTCTAAGAGTTGCAGTGACCATCAGCATCTCCTTGCACCCCTTACCTTATACAAGCAGCTTTACTTGTGTGTTCTTCTTTTTCTTTGTTAGATACAGCTGGGGCTACATGCTGCTTAAGTTTTTTAGACATGCTTAACATTGCCAATGTATGTATTGCATCATGATCTGGGGATGACATTTTACATTACTTTGGGGCATTGGTTTGAAACCAAGAACCATGTTTGATTTTTGGTTACTTCCTAAAATTTGAGTTTACACATGTATTACCTTTTTGCTAAAGAATAATATTTTTTACAAGGGACTCAGTCAATAGGGATTATGGTTCATAATTATCTTAAAATTAGTTTTGGAAAACCCACATTGTAACTCATACCCAAACAATTCAAGAATGTTCAAATCCACAATGTTGAGTGTTATACTTGGTAATCATCAGTACTTTTATGATGCTCCACATACACACAGATACTCCATTCAACATGTATGCTTATATTGTCGGAACAATGTTAATGCTTACTCTGGCATTGTTGCCTCTATATGCAGCACAGGTTTAGTTGTTTACGAAGAAAGTATAAATATTTTTTCTGGGGAGCAAATTTGAATATCACGGTATGCGAATTATTTTGTTTTAGGCTTATAATGCTTTTGCAGAAATAATTTGGATCTGCATTTTCACCAGGCTATGGAGAGGGCCGGTAAGAAGTTTGTAGGGGAACACGACTTTAGAAACTTCTGCAAAATGAATGCTGCAAATGTTCACAATTATAGGCGACGCATCATGTCGTTTGACATTTCTCCTTGTGATGTGAGGTTGGTGTTGCTATCAGATCTTCTCATCTGTTCTCCAATTGAACTGCGTAATCGGATTGTGCCTTGCGTTTGTATATTTTTATTCTCGAATCTGCTTTGCACATTTGCTTCTCAGGCCATCCAAACTAGCCTTCCTCTAGCTATTGTTCATGCTTATGTTACTTTATTCTTCCCAGTTTTGGCCTCTTAAGTCCACTAACTATGTTCTCTCCTAGGTGTTGCCAAGCTGACAGTAGTTTACTAACTAGAATAGTAGTGCTTCTCTGACCATATTCATTTTGAGTTGTAGATAATACTGTTGAAATGGACCATCTCTGTGATTTGTATCATGTACAGGGGTGGACTGAGTTCACATCATGCAAGATGCTTCGAACCTTGGAAGGATGATCATGTTAAGCATCCTTACATTATTGCCGTGTTAGATTTCTGTTTATTCCAAATCTAGAATGTATGAAGATGATTAGACAAATTAAAAGAATATGAAATTCTCTTCTACTCTTCTGGGAGAAAAAACTGTGATCCTATAGAACCGTGTTTTATGATAGAACTCTCTCGAATGTATCTTTTGCAACTTCATTCCACATCATCGTGTCCCGAACTAAGATGTCGTCTTGACTCAGGGTATCCTTTTTTTAATAAATAAATTAATCTCTCTCTCTCTCTCTCTCATGCACATCTATGAAATATTTTTGTTTCTCGACTCTGAATCTTTCTGGTACTTTGCCAGGATGGAAGGCAATCTATTATGGGCATTCAACATTGAAGGCAGTGCTTTCCTCTGGCATCAGGTCCGCTGCATGGTTGCTGTAGTATTCATGGTTGGGCAAGGTCTTGAAGATCCTGATGTGTGTGCCAGACGTCTTTACATCTGAAATTGCTATGCTTAAATAAGTTGCTTTTTTAATATGTTAAACTGCTTGCTTTTGCTCATGGAAATATAGCCATCTTATACTTCATAGGCCTTAATACTCTCACTTCAGTTTATCATATCTATCTGGAACGGCCAAAAAAGATAAATAAGTAATTGTAAATTTGGTGGTAACTAGGAGCTAGTGTTTTTCAGAATAGACAGCCAAATTTAACTTTATATAGATGCATCGGCCGTTGACAAGGAAACTACCTAGCCACTGTTTCTGTGCAATACATTGGTCACACAATTAGCACTCATTTCAAGATGGCAACATTGAAAGCCACTGTATTATGGTTTCCCAATTATCAACATTACTTGGCACATGGTGTGAATTTGTTATGTTATCTGGAGTATAAAATGCATCTTAATCTAATGGATGAGAGGACTGCTAAATTTTGTAGGTCGTAGATATTCTACTGGATCCATTAAGTACACCAAGGAAGCCTCAATACGTTATGGCTTCAGAAAGTCCTCTGGTTCTTCATTCTTGTGAATTTGAAGGTGTCAAATTTAGGTGTTCGTCAGGTACTTATTGCAATTGATTATAGATATTGTGACTTCTACCGCCAGTATATTATCTTTTCACCTTAGTTGTCGTTATATTATTGTTCTATATTTAGAGGATTTCCCTGCCTGCATTGCTTCTAGATGCTGGAGAAGCTCTTCAGTTGCATTTATCAAATGAAATCCGAACATATGAGCTCCAAGCTGCAATATTCAAAGAAGCTCTTCTAAGCTGTTTGCCAATCACAAATGGTTTGAATTGTAGTCTTTCCCTATTATACATTAGTCTTCCTTTTTCAATTGATTCATGATACTGATGCGACCACTTCTATCTCCCCTCCAGATGGGAGCTCTTCAGACAAAAGAAAGTTAAAGAAGAAAAATTGCCATGTTGCCCTATTGTCAAGGCCAACTGAGCGTAAGTTATTCACAAAAATACTGTTTACTATTGGGATTATTTATTTGGTAATGTCATATAGTACTACACTATCTGTACTAAACAACTGAATATATTGTTTTAGTATCACAGTTAAAAAGAAAAACACTTAGTTACCCAAATCTAATAACCCTTGTGTACATACGAGTTACCGAATGGGGTCATAACCATTATATGTTTTGTCTGTGAACTCCTCAAGTATTATAGATGTCTTGAGATGAGCAAAAATGGGCTCAGGATGGTTTACACTTCATGTTATTTTGCTTGCATTCCTTTGCCTACCAGAGGTAATTAATATCTACCCACGCCCTTCAGTTACAGCTGGATGCAAAAGCAGGGTGTAAGGTATTTCCCTCACAACTATTGATATGAGATGGAAAGAAATGCTCTAAGGCAATACAAACACTTCCCAGTCTATTCGTGAGGGTTGAATAAACTCTTCTTCCTATCAGCTTGCTGAAACTGAAAGATATAAAAAGTACGAAAATCCACTCCCTAATTCTTTACAAATGTGTAGAGCCCCCCTTTCCCAAACATTCTCTGTGCTCAAAACCTCACCTGATCCCCCCAACGTCCCTCAAGGCAGACCTCAAATGGTTCCATCCACGATTCTAACTCACTCACTGAGGTACATCGTCCTTACTTCTTCTGTATTGAAGAGTAATCAGGGGCCTAACATAGGGTTGCTTAAATTTTTTAGTAAAAGGGGCAGGATTCTAAAGGTGACTTGGCTACTTCGATGGATTTAGACTTTCTAGAACATATTATTCCTAGATTTAGAAAGCAATCTTCTAGATAATTGACTTGTCCTTTGAATTCCCTTAATCTTGTGGCCGATCTTTTCAATAGAACTATGCATCTGAAGTGGAAAATCGATGAAATATTGAAATTGTAGTGAACTGACTTCTCTTTCTTTGCTAATGATTTATGTTCTTGCAAGCCTAGCCGCCGTGGAGGAAGATGCTAATCGAAAACTTCAAATATTAGCTACATGATTGGGTTATCTTCTAAAGAGGGATTGGCCTTTGTTTGTTTGATCGGTTAAATCCTTGTATCTAAAGTGTTGCCTTTTCTCCTCCTCATCCTCTAACGATATTATTAACTGCCATTTTTATTCTCTGTTTCCAAAACCATACCTTTCCCACTGTTCTTATTCCAATATGATAGTGTATGTATTGATATATGCTGTTACCTTTCCTTGTAAATCTTACGAGTTGTTTTACTTATCCCAGCTTCTTATGAAGAGCGGCGTGCCAAACTTGATCCAACATCAACGAGTTGATCAAATACATCTTCTTAGGTGCAGGTAACATGGTTTCCCATTGCATGCTATATTCACTTCATTGTCAAGATCTTTATGTCTCTTAACATGGTATCTAGTTTCACATTTTTGTGTTTTCTGAAAAATACGTAAAAAGTTGTCAAGGAAAAAATGAAACTAGTTATCATATTGATATGGATAGAAGATAAATCTAAGAGTATCTCTTGTTCCATTTTATAAGAGAGTAGAAGTATTTTAAAAGTAGATTTGGCCTATCTTTTAGAACACTAATAATTAAGGGCACTTCTCATATTTATCGGAAATTCAAACGGTTCAAAAAAGTACGAACCACTTCATTTCCTAAAAAAACATAGGTAGCAAAAAGTATTGGCAATGGTGGTTTTTAACTCACCCTTAGTAAACAAATTGCATTACCGTAGGCCCTTTGGTAACAATTTTATTTTTGGTCTTCTATTTTTGAAATTTGTACTTATTTTCTATTAAATTTTTTATAGTAGGTTTCACCTTTCTCAAACAATTATTTGAATTTATAGTGAAATTTTGAAAACAGAATAAGCTTATAAATACAATCAGCTTGATAATCATTTTGGCACCATTTATTTTTTGTTTTAGGATTTTAAAAATTAAGTTTAGGAACATTATTTCTATTTATTACTTTCTTTGTTTTGATATCTACCCTTTAAAGATGTTTTAAAAAATCAAGTCAAATTTTGAAAACTAAAAAGTAGTTTTTTTTTTAACTTCTTTTTTATGAACAATGGTAAAAAGTGGTTTTTTTTTGGAAAGCGGTTGAAGACGAAATCCATTTATAAAAAAGTGGATAATAAAACAAAGAAAATTTATATAGGAAAGAAGTATTCATAGAAATCAACCTCTGTAGTTTTGCAGAGTTTGAACACTCAAAACATTAAAAGAGCAGAAGCAGCAATGATGAGCATCTGGTGATGAAGGGGAGAGGTGTCTAAAGAAAAAGGTGACAGGCCAACCAGACCCCAACATCAACATGTAGTATCATCATGAATCCAGGTGCATGAACTCAGACCAAATCATTTTTCTCACTTGCTCTGTCCCCCTTTCCTTCCAATTATTTTTCACATCTTTATGGTTTTATTATGTTGACAATGACTATTGATGGTTCTGTGCTGTATGTTTCTTAATGTTCTAAACTGTGTAAAGTTTAACTTGTTTTTATCACATAAATTATTATTTTTTTTTTCTTTTTGAAAAATAGTTGGAGATACTTTGTTCTAGAGGAGGCTATGTTTTTAAACTAAAATTTAGGTTTAATTTTACAAAAACACCCCTGAACTTGGATAGGGTTCTTTATTCTTTTTTGGAAAAGACTATATAAAAGATTTAAGTTCATTATTGATCTTTAAAATGATTTACCTCAACAATTTATACATTAGTTGTCTCATCAATCTACATGAATGATTATAAATGATGTCACATATACCTTTCATTTTTATTTTTTATACCTGAGTCGTGCTTTGATTTTCAAAGGATAATTTTTTAAACAAATTTCAAAGTTCAAAAGTAAAGTTGAAACTTTTGAAAGTCTAGAATTGAAACCTACCATAAAATTCATGAGTATTTTGATACTACAAGTACTATGCCAATTGAGCTATACTCATTTTTGGTGTATAATTTAATTAATTATTGAATGATCAATATGGTTATTAATGAACAGCTATTACCTTATTTATCTAGTTATTATGAACGAAAAGGTATAGAATTTAGCTTAACAAATCACAGGAATGATATCAGGTAATAGTTTATCAATTGACAGACTTTTTTTCCCCTTTGTGCATGCCAGATAATAAGGTCAAAAGTGATTGTGGTCAAGAAAGAAAACATTTTAAGTTAATTATGATTTTACTTTTAAGATTATTTAAAAAAGTGTTATGATTCTGCCTCAATCTTCTCGTCAATATTGGTACTGATTGAATAATAATATATAATCTCTCACTTGTTTATTCTTTTCATGCAATTAGGAAATGGGTTGAATAATATACTTTATAATACCATTCCATTTTGAGAAAATAAATACAGGAGAAGAGAAGTATTTTTGAAGTTACTTGCAAGTTGCAGCTTCATCTTTAATAGACTTAAAAGGGAGGTTTTTCAATAATCTTTTCTCCTTTGATGAAGGAAAGAGTAGATTGAAGGCAAGCACAGCTCATCTAGATAACAAACTCAGACAAGACCTTAGTCAAATTTCTATCATCAGTCATAAAAGAAAGAAAACTCGTTTTTTTTTGAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAATCTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAACAAGAAATTGCATTTTAACTTTTGAGTAGTTTTATATTTAAAACAAATTGTATTATGAATAGTTTATATTTTGGAATAATGATTTACTCATAAACTGGTGTTTTGGATAAATTGTTTCTTGATATATTCTTTTGGGATGAAGTTTAAAATTTAAATTTACCATTATTTAAAATTATCGCAATTTTCTCTCCATCTTTATTTATTATTATTTTTTTTGGGATGGGAACTATAGGTGTATCATTAAGTTTCAAAATGTTACACTTTTATTCCTTAATTTGTCTTCTCTTTAACCCAAAAGGGGAGTACTTAAAATTGTATTGTTCTATTAACATGTTATACTAATTGAAATAGATCTTAAAAGCATTTAGTATTGATTAATTAATTGCCTTCTGGTGAAGTACGAGTTTGACTATATAAAGATATTGGTTCCTTTTAAACAGGAAAATGAATTTAAATACTTGTCTGAAATATAAAATTAACATCTTTTTGGCTTGAAATTCTGTAGATTTGAATTTTCTTTAATATATGTGTTGGGAGTGTTGGGGCTTGGGAGTAAGGTTTCAAATTCGGATTGACATCAGATCGCCCATCCAATTGAAAACAAATTTCCATTTCTGTTTACTTTTATCTAATTTATTAGATATAAGTAAACAATAGAACACTATAATTTGGAGATTTTTATATGCATCTCATATTTCACGTCTAAAATACCATTTGATAGGTTTAAAACTAATAAAAAATAATATTTTGCTAGTATAAAAAAAATTGCCAATGCTTTTGTGAGATTGATGGAGGAAGAGCTCTAATGTGAGAGCAATATAGTATTAAATTAGTCCAACATAAGTGTGTGGAGGGAGGATGAGCGAGAGTGCGAGGGAGTGATACAAACAAAAGGTTATACATCATTATTTTTAAAATACAGATCAAATGACATTTTGGTTATGAAATTTGGGTCATCCGTACAAAAATCTTCATAGCTCAACTTTCAATACTAAAATAAATTATAGTAGGTGTTAGATGATATGAAATTAAATTTATCTTCACACGTGAACTCTTTTGAGTCAATCGGTAATTTAAGAGTAAGAGTAGGACAGATTTTTTTGGTTCTTTAGAAAGTTCTTTAAGGACCCATTCTTCTTCTTCTTCTTCTAAAAGTGTAAATAATGTACTTTACAAAATTGTTAAATTGTTAGTAAGAAGTGTTATGGATAATTTTGGACCGAAGATATAATTGACATAAAACCGGAGATGAATTAATAGAGCCAAAAAATAAAAAGATTCGAGCAAAAAATAACGTCATATGACCAAAATGGACCTAGGAGAGAGAGTTTATTTGCGCCAAGACTGAAATTAATATGCTCAACCTCGATCAATGTCGAGGCCAAGTCTAAAAAAATGTTTAATGGGGTATACTTCTTGCATGCCTTGATTCAATGAGTGGTCATCTATTGTTATAAATACATTCTTATAACTTTAAGAAAAATAAGTCTATTCTCTAGTCACAAACTATTAACTTAGTGCAATGATACACTCCATAATTTAAGCATTGGAGTATGTATGGCAAGCACCATAACAATGCACAAATTTTTCTATTTTGTGAGTCATTTTCTTCTCCTTATCAAACAAATTTACTGTTATTATCATTCTTTTCCTTGTTCGAATTTTCACATTAACTTAAAGTATATTAATATTTTCAATATTGAAATAAATCTCCTTTCATAAGTAAAAGTATCCAAATAAACCTCTCCTAAATAAGTTTTAAAAAAAACCCTAAAAAGGAGGAGGTTTATCTCACAAAATCATGAATTTACCAATTAAAATAAAAACTATTTGAAATGTTATAAAATCTCAATAGCAATATTAATTTTTTGAATTCAAGAGGAACTTTTTTTTTTTTTTTTTTTTTTTGAGAAAACTTTTGCGTTGTTAATTAAAACAACACAATCAATAATTATTAAAGTCATTATTGCATTGCGACCTCAATAATTTATAATTATCGAAAATTATTTATTTATCCTACTCTTAGAAAAAAAAAATATATTTATCCGAACTGCCGAAGTACAGAGAAAGATCTCGTTCCCGCGAGGGAAGCTCGGATCAAACGAGAGGCTCTCCCTCTTTTCTCCTCAAAACCAACAAAAACCACTTTTCGTTTTCGCTCTCAATTCCAATTTTCTTCCATTTCTCCCTTCGTTTTCTGTTCTTCTCAATTTGAATCTGATTTTCAGAAAATTGTGTCTCGTTCTTGTGTTGTGTTGATTTTGCGGTGAAAAATCCATTGGGAAAAATGGAGGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTTTCGGCTCTTCTCACTCTCTTGCCCCACCATTCTTCCGATCTACTCTCCCAGGTTGACCAGCCTCTTCAGGTGAAATTTCTTTGTTCGTCGGCTGTTATTTTGAAATTTCTTTGAGATTTTGTTGGTTTTTGTATATTATCAGCGTTTTTTTTCCTTTTAACTATTTATTCGGTTCTTAGGGTTCTCATTTGATTTTTATTTTTTTTTTTTTTTTTTTATCGGCTTTGTCTTGTTCCGATTCAACCCAATTTCCCTAACTATAGTTGTAATCCTGGGTCCTGGTTCTAATTAGGTTCGGGTTCAAGGATGAATATTTTGCGGTGGCAGGGTTGAATAATTAAGAGCGGTTCTCTGATTTTCTTTTTAGTTATCTTTTACTTCATTTACAAGGTTTTGTTTGTTTAAATAAGCAGGGATAGGTGTTATATTACTTTCCCTTTTTCCACCTCTTCTTGTTACTATCTGTTCTCTCTTGGATTATTTTATTACTACTATGCTGATGAACTTTTGTTCTAGTCGCCTTTGGTGCTAAGTTAAGTTTTCTATGATAAATTGCATTTCTTCAACCCTTTCCCCCTCCTTTCAACTGACAGTGCTTCAACTTGTTAAAATGAACTTAAGTTCCCAAGTTTTCTGAATGAGAAATCACAACATTTACAGGTTCTATGTGATGTGGACAATGGGAAGGAATTCATTTTGTGTGAATACAACAGAGATGCAGATTCATATAGGTATGTACTTGGATCTACTTTTGCAGGATTTGTGCATCTAGCACGAGTAATATGCATCGAATGGTTTTAACAAGGTTTTCTCAGTTAATAGATATTTTGATGTCTACCTTAATGTTTGAGGCTATTATGCTAACTGTTCCAGTTATGAGTAGCACTTTGAAATGTATGCCTAACTTCAAGACAAGTTCTTTGCATGTTTCAGAATTCCATTTGTGTTTGTACTTATCTACTAGATAGGTAAAGCCAGTGGGTATGCATTATGTAAATCCAATTTTTTCGTTAAATATATGAGTCAGTTGTAAGCAAGCATTTATTGCATGATTTATGAAGGGCTTTCAATGTAAAAAAATCTTTAAGTCTGTGATCACTGTTTTTCCTTGTACCACTGGTTATGTAAGCCAACAAATATAACAGTATTGGAAAAGAAAAACACAGATTCTGTTGACTAATATAAGAATACTAAGTTTGGGAATATGATCGCATGATCTATGGTTGGGTTGATTAAAAAGTAGGTTCTGTATATTTTTGCTTTCTTATAGTTTCTTTTTGTCAATGTTTTATTTATATGCACTACATGATGCTACATTCTTTTCTTGCCATATAGATCACCGTGGTCAAACAAATACCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGAGGAAACTTGAAATTGAAGCAAATGAAGTATTCACAATCTATCGTGACCAGTGAGGTCCTTTGCTTGCTTCCTTTTTGACCTTTGTGCAATAGAATACTCTTCATACATTTTAGATACTATCTGCAACCAGCGTATACTTCTAGATTCAAAAGGCATTTTCTTGTGCGATTATTTATTTCTAAGACAAATATAGAACCTACCCAGCCCAAACCGAAAAATGAACCTACCCCGTTGAATTTAACACTCAATTGCCTTGTGTGATTATGTATTTCTTAAGACAGCTGCTTTAACAAATGATTGGTCAGGTATTATGAAGGTGGCATTTCATCTGTGTATATGTGGGAAGATGATGAGGAAAGTTTTGTCGGCTGTTTTTTGATAAAGAAAGGTAAGACTAACTAATACATGAGCTATGAGCATTAATAAAAGTGAATGTTTGCTCATGTGATGCTTTTTGAGGATAAAGATGGCTCAAAGACTGGTCATGGTCGAAGGGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTATCTTTGTTTCCGTTGATAAAAGATGATCTACTAGATTTTGGATTGTTCATATACTCTGCCCATCTCTTTACCAAATTCAGGTGAGGCTAGAAGATGAGGGTACAGCCAGCTATTGTCTAACTAGTACAGTCATGCTGTCCTTGACAACAGATAACAATGCAGCAGGGACTTTCAGTTTGTCCGGTTCAATTAGAAGACAGGTACTTCGAAATGAATTTTGTATTGATGACTATTTAGATTCAAATAGTAACCATCATGAGTTGACCATAAGAGTCATGAGTATAATAAAGAACTTAGAGAGAATGAGTTCATCCCATGGTGGACGCCTACCTAGAATTTAGTATTTTACGAGTTTTCTTGATCCCATTATGAGTCAACAACAAATATGCTTGTGAATAGCAGTCATCTGTTGCTCTACCATGTTACTTTGACGGTTATTATTTCATCCGTGCCTGTGTGTTCTTCTTTTATTCTACCTTGCACCTTTAATACGAGTAATAATAGAGGGTGTTGTTTGATGTTTGAGAAGGTTCTCTTAAATTAAACCTTTCTTTTTGTAACAAAGGGAGGGATTTTTTTTTGGCTATTTTGTGGGGCATCTGGCTTAAGAAGAATAGTAAAGTTCCTCCATGTGGGTGTTTGTTAATTTGGGTTCTTGTAATATCAACTTACCCTATTCTTGTATAGATGAAAGCATGGTTTCTTATTAAAAAAAGATAATAATCATTCTGGTTCCACTACTGTTATAGATGAAGATGAAGCTCTCAGTTGCCGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTAATTGTCCCCCGATCCTTCGCCTCTCTCGATTTGTCATCTCTGGATCTGTATGCCCTTTTCAAGGCACAAGGTTTAACCAAAGAAATGAAATTATTCGACGTGGTACCCTTCACAGGTCTATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGGTGCATATGAAATTACCCGACAAGTGACCACGGATTATACAGAAACTGAATCGGCATAG

mRNA sequence

ATGGTCAAGGTCGGGGGAGGGGGGTGGGGTCAACCTCTTCCCGACAAAGGCAACATGGGGGTTGGTCCCTTTGACCTGAGATCGAGAGTGGAACATTCCCTTGATCATAGAGAAACTGCCGGAGCAATCGGGATGATTTCAGGAGCTAACGAGTTTCAGCCATTGGAGGAAAACCTAATTGTCAGTCTTCAATCCCAGCTTCGTTTTCTCCAAGGCAGGGTTAAGGAATTGGAGGAGGAAAATTTGAAGCTATCCTCTCGACTTGCTAGTTGCCGCTGTTCTGAGTCTGAAATTTTCAGAGCTCTTGAGAAAGCCAGGCTTCTTGGTGTTGGTAGGAAGGAGTCTTGTTATTCAAGATGTGGGAGAACGGACAGGGGAGTCTCATCTGTCGGACAAGTAATTTCTCTCTATTTGCGGTCAAACCTTAAGGATCCCCCTAATGGTGAAAATAGTGATCATAATGAGGAGCAACATGATGGAGAAATTGATTATGTGAGAGTAATTAATAGAGTCCTTCCTAGTGACATTCGGGTGTTAGGCTGGTGTACTGTTCCTATTGGCTTCAGTGCAAGAAATAATTTGGATCTGCATTTTCACCAGGCTATGGAGAGGGCCGGTAAGAAGTTTGTAGGGGAACACGACTTTAGAAACTTCTGCAAAATGAATGCTGCAAATGTTCACAATTATAGGCGACGCATCATGTCGTTTGACATTTCTCCTTGTGATGTGAGGGGTGGACTGAGTTCACATCATGCAAGATGCTTCGAACCTTGGAAGGATGATCATGTTAAGCATCCTTACATTATTGCCGTGATGGAAGGCAATCTATTATGGGCATTCAACATTGAAGGCAGTGCTTTCCTCTGGCATCAGGTCCGCTGCATGGTTGCTGTAGTATTCATGGTTGGGCAAGGTCTTGAAGATCCTGATGTCGTAGATATTCTACTGGATCCATTAAGTACACCAAGGAAGCCTCAATACGTTATGGCTTCAGAAAGTCCTCTGGTTCTTCATTCTTGTGAATTTGAAGGTGTCAAATTTAGGTGTTCGTCAGATGCTGGAGAAGCTCTTCAGTTGCATTTATCAAATGAAATCCGAACATATGAGCTCCAAGCTGCAATATTCAAAGAAGCTCTTCTAAGCTGTTTGCCAATCACAAATGATGGGAGCTCTTCAGACAAAAGAAAGTTAAAGAAGAAAAATTGCCATGTTGCCCTATTGTCAAGGCCAACTGAGCAAAATTGTGTCTCGTTCTTGTGTTGTGTTGATTTTGCGGTGAAAAATCCATTGGGAAAAATGGAGGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTTTCGGCTCTTCTCACTCTCTTGCCCCACCATTCTTCCGATCTACTCTCCCAGGTTGACCAGCCTCTTCAGGTTCTATGTGATGTGGACAATGGGAAGGAATTCATTTTGTGTGAATACAACAGAGATGCAGATTCATATAGATCACCGTGGTCAAACAAATACCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGAGGAAACTTGAAATTGAAGCAAATGAAGATAAAGATGGCTCAAAGACTGGTCATGGTCGAAGGGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTGAGGCTAGAAGATGAGGGTACAGCCAGCTATTGTCTAACTAGTACAGTCATGCTGTCCTTGACAACAGATAACAATGCAGCAGGGACTTTCAGTTTGTCCGGTTCAATTAGAAGACAGATGAAGATGAAGCTCTCAGTTGCCGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTAATTGTCCCCCGATCCTTCGCCTCTCTCGATTTGTCATCTCTGGATCTGTATGCCCTTTTCAAGGCACAAGGTTTAACCAAAGAAATGAAATTATTCGACGTGGTACCCTTCACAGGTCTATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGGTGCATATGAAATTACCCGACAAGTGACCACGGATTATACAGAAACTGAATCGGCATAG

Coding sequence (CDS)

ATGGTCAAGGTCGGGGGAGGGGGGTGGGGTCAACCTCTTCCCGACAAAGGCAACATGGGGGTTGGTCCCTTTGACCTGAGATCGAGAGTGGAACATTCCCTTGATCATAGAGAAACTGCCGGAGCAATCGGGATGATTTCAGGAGCTAACGAGTTTCAGCCATTGGAGGAAAACCTAATTGTCAGTCTTCAATCCCAGCTTCGTTTTCTCCAAGGCAGGGTTAAGGAATTGGAGGAGGAAAATTTGAAGCTATCCTCTCGACTTGCTAGTTGCCGCTGTTCTGAGTCTGAAATTTTCAGAGCTCTTGAGAAAGCCAGGCTTCTTGGTGTTGGTAGGAAGGAGTCTTGTTATTCAAGATGTGGGAGAACGGACAGGGGAGTCTCATCTGTCGGACAAGTAATTTCTCTCTATTTGCGGTCAAACCTTAAGGATCCCCCTAATGGTGAAAATAGTGATCATAATGAGGAGCAACATGATGGAGAAATTGATTATGTGAGAGTAATTAATAGAGTCCTTCCTAGTGACATTCGGGTGTTAGGCTGGTGTACTGTTCCTATTGGCTTCAGTGCAAGAAATAATTTGGATCTGCATTTTCACCAGGCTATGGAGAGGGCCGGTAAGAAGTTTGTAGGGGAACACGACTTTAGAAACTTCTGCAAAATGAATGCTGCAAATGTTCACAATTATAGGCGACGCATCATGTCGTTTGACATTTCTCCTTGTGATGTGAGGGGTGGACTGAGTTCACATCATGCAAGATGCTTCGAACCTTGGAAGGATGATCATGTTAAGCATCCTTACATTATTGCCGTGATGGAAGGCAATCTATTATGGGCATTCAACATTGAAGGCAGTGCTTTCCTCTGGCATCAGGTCCGCTGCATGGTTGCTGTAGTATTCATGGTTGGGCAAGGTCTTGAAGATCCTGATGTCGTAGATATTCTACTGGATCCATTAAGTACACCAAGGAAGCCTCAATACGTTATGGCTTCAGAAAGTCCTCTGGTTCTTCATTCTTGTGAATTTGAAGGTGTCAAATTTAGGTGTTCGTCAGATGCTGGAGAAGCTCTTCAGTTGCATTTATCAAATGAAATCCGAACATATGAGCTCCAAGCTGCAATATTCAAAGAAGCTCTTCTAAGCTGTTTGCCAATCACAAATGATGGGAGCTCTTCAGACAAAAGAAAGTTAAAGAAGAAAAATTGCCATGTTGCCCTATTGTCAAGGCCAACTGAGCAAAATTGTGTCTCGTTCTTGTGTTGTGTTGATTTTGCGGTGAAAAATCCATTGGGAAAAATGGAGGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTTTCGGCTCTTCTCACTCTCTTGCCCCACCATTCTTCCGATCTACTCTCCCAGGTTGACCAGCCTCTTCAGGTTCTATGTGATGTGGACAATGGGAAGGAATTCATTTTGTGTGAATACAACAGAGATGCAGATTCATATAGATCACCGTGGTCAAACAAATACCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGAGGAAACTTGAAATTGAAGCAAATGAAGATAAAGATGGCTCAAAGACTGGTCATGGTCGAAGGGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTGAGGCTAGAAGATGAGGGTACAGCCAGCTATTGTCTAACTAGTACAGTCATGCTGTCCTTGACAACAGATAACAATGCAGCAGGGACTTTCAGTTTGTCCGGTTCAATTAGAAGACAGATGAAGATGAAGCTCTCAGTTGCCGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTAATTGTCCCCCGATCCTTCGCCTCTCTCGATTTGTCATCTCTGGATCTGTATGCCCTTTTCAAGGCACAAGGTTTAACCAAAGAAATGAAATTATTCGACGTGGTACCCTTCACAGGTCTATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGGTGCATATGAAATTACCCGACAAGTGACCACGGATTATACAGAAACTGAATCGGCATAG

Protein sequence

MVKVGGGGWGQPLPDKGNMGVGPFDLRSRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLASCRCSESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSNLKDPPNGENSDHNEEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSARNNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPCDVRGGLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYELQAAIFKEALLSCLPITNDGSSSDKRKLKKKNCHVALLSRPTEQNCVSFLCCVDFAVKNPLGKMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEYNRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEDKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLSLTTDNNAAGTFSLSGSIRRQMKMKLSVAEGHLCNMGRMIEEMESKLRNSLDQVIVPRSFASLDLSSLDLYALFKAQGLTKEMKLFDVVPFTGLFWENKRDGLHLAATLRSGAYEITRQVTTDYTETESA

Homology

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BLAST of Lsi08G005930 vs. ExPASy Swiss-Prot
Match: Q9M9G7 (Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana OX=3702 GN=At1g71790 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.2e-80
Identity = 155/230 (67.39%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 433 MEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEYN 492
           MEAA+GL+RRMPPK SETALSALL+L+P HSSDLLSQVD PLQVL D+++GK+FILCEYN
Sbjct: 1   MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query: 493 RDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANE----------------------- 552
           RDADSYRSPWSNKY PPLED   PS ELRKLE+EAN+                       
Sbjct: 61  RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 553 ----------DKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLSLTT 612
                      KDGSK+GHGRRG L+EGAWDAIHVI+V  E+E  A YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query: 613 DNNAAGTFSLSGSIRRQMKMKLSVAEGHLCNMGRMIEEMESKLRNSLDQV 630
           D+ ++G F LSGSIRRQMKM+L+VA+GHLCNMGRMIEE+E KLRNSLDQV
Sbjct: 181 DDESSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQV 230

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BLAST of Lsi08G005930 vs. ExPASy Swiss-Prot
Match: Q3SX07 (tRNA pseudouridine(38/39) synthase OS=Bos taurus OX=9913 GN=PUS3 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.4e-48
Identity = 123/287 (42.86%), Postives = 163/287 (56.79%), Query Frame = 0


Query: 95  ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSNLKDPPNGENSDH- 154
           E ++F AL K RL+   R+ S Y RCGRTD+GVS+ GQVISL LRS++   P G +S+H 
Sbjct: 90  EEKLFEALTKTRLV-ENRQTSNYHRCGRTDKGVSAFGQVISLDLRSHI---PKGRDSEHF 149

Query: 155 --NEEQHD--GEIDYVRVINRVLPSDIRVLGWCTVPIGFSA--------------RNNLD 214
               E +D   EI Y  ++NRVLP DIRVL W  V   FSA              R NLD
Sbjct: 150 NLKNEVNDVATEIRYTHILNRVLPPDIRVLAWAPVETSFSARFSCLERTYRYFFPRANLD 209

Query: 215 LHFHQAMERAGKKFVGEHDFRNFCKMNAAN-VHNYRRRIMSFDISPCDVRGGLSSHHARC 274
           +     M  A +K+VG HDFRN CKM+ AN V N++R I+S  +     R G +      
Sbjct: 210 I---VTMNYAAQKYVGTHDFRNLCKMDVANGVINFQRTILSAQVQ----RVGQNLGEEGW 269

Query: 275 FEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDI 334
            EP++                 L  F + G AFL+HQVRCM+AV+F++GQG+E P+V+D 
Sbjct: 270 QEPFQ-----------------LCQFEVTGQAFLYHQVRCMMAVLFLIGQGMEKPEVIDE 329

Query: 335 LLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHL 362
           LL+    P+KPQY MA E PLVL+ C+FE +K+    +  E    HL
Sbjct: 330 LLNIEKNPQKPQYSMAVEFPLVLYDCKFENIKWIYDREVQEFNVTHL 348

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BLAST of Lsi08G005930 vs. ExPASy Swiss-Prot
Match: Q9BZE2 (tRNA pseudouridine(38/39) synthase OS=Homo sapiens OX=9606 GN=PUS3 PE=1 SV=3)

HSP 1 Score: 193.4 bits (490), Expect = 8.9e-48
Identity = 119/281 (42.35%), Postives = 160/281 (56.94%), Query Frame = 0


Query: 95  ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSNLKDPPNGENSDHN 154
           E ++F AL K RL+   R+ S Y RCGRTD+GVS+ GQVISL LRS      + E+ +  
Sbjct: 90  EEKLFEALTKTRLV-ESRQTSNYHRCGRTDKGVSAFGQVISLDLRSQFPRGRDSEDFNVK 149

Query: 155 EEQHDG--EIDYVRVINRVLPSDIRVLGWCTVPIGFSAR-----NNLDLHFHQA------ 214
           EE +    EI Y  ++NRVLP DIR+L W  V   FSAR           F +A      
Sbjct: 150 EEANAAAEEIRYTHILNRVLPPDIRILAWAPVEPSFSARFSCLERTYRYFFPRADLDIVT 209

Query: 215 MERAGKKFVGEHDFRNFCKMNAAN-VHNYRRRIMSFDISPCDVRGGLSSHHARCFEPWKD 274
           M+ A +K+VG HDFRN CKM+ AN V N++R I+S  +       G S    R  EP++ 
Sbjct: 210 MDYAAQKYVGTHDFRNLCKMDVANGVINFQRTILSAQVQLV----GQSPGEGRWQEPFQ- 269

Query: 275 DHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLS 334
                           L  F + G AFL+HQVRCM+A++F++GQG+E P+++D LL+   
Sbjct: 270 ----------------LCQFEVTGQAFLYHQVRCMMAILFLIGQGMEKPEIIDELLNIEK 329

Query: 335 TPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHL 362
            P+KPQY MA E PLVL+ C+FE VK+    +A E    HL
Sbjct: 330 NPQKPQYSMAVEFPLVLYDCKFENVKWIYDQEAQEFNITHL 348

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BLAST of Lsi08G005930 vs. ExPASy Swiss-Prot
Match: P14315 (F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus OX=9031 GN=CAPZB PE=1 SV=3)

HSP 1 Score: 190.3 bits (482), Expect = 7.6e-47
Identity = 104/227 (45.81%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 432 KMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEY 491
           +++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D   GK+++LC+Y
Sbjct: 5   QLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDY 64

Query: 492 NRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEDKDGSK---------------T 551
           NRD DSYRSPWSNKY PPLEDGAMPS  LRKLE+EAN   D  +                
Sbjct: 65  NRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDL 124

Query: 552 GHGRRGFLQ-----------EGAWDAIHVIEVRLEDEG-TASYCLTSTVMLSLTTDNNAA 611
            HG  G +            +G WD+IHV+EV+ +  G TA Y LTSTVML L T+   +
Sbjct: 125 DHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGS 184

Query: 612 GTFSLSGSIRRQMKMKLSVAEG--HLCNMGRMIEEMESKLRNSLDQV 630
           GT +L GS+ RQM+   +V++   H+ N+GR++E+ME+K+R++L+++
Sbjct: 185 GTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEI 231

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BLAST of Lsi08G005930 vs. ExPASy Swiss-Prot
Match: P79136 (F-actin-capping protein subunit beta OS=Bos taurus OX=9913 GN=CAPZB PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 9.9e-47
Identity = 104/227 (45.81%), Postives = 147/227 (64.76%), Query Frame = 0


Query: 432 KMEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEY 491
           +++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D   GK+++LC+Y
Sbjct: 34  QLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDY 93

Query: 492 NRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEDKDGSK---------------T 551
           NRD DSYRSPWSNKY PPLEDGAMPS  LRKLE+EAN   D  +                
Sbjct: 94  NRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDL 153

Query: 552 GHGRRGFLQ-----------EGAWDAIHVIEVRLEDEG-TASYCLTSTVMLSLTTDNNAA 611
            HG  G +            +G WD+IHV+EV+ +  G TA Y LTSTVML L T+ + +
Sbjct: 154 DHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGS 213

Query: 612 GTFSLSGSIRRQMKMKLSVAE--GHLCNMGRMIEEMESKLRNSLDQV 630
           GT +L GS+ RQM+   +V++   H+ N+GR++E+ME+K+R++L+++
Sbjct: 214 GTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEI 260

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BLAST of Lsi08G005930 vs. ExPASy TrEMBL
Match: A0A5D3C242 (tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00640 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 4.2e-157
Identity = 316/497 (63.58%), Postives = 335/497 (67.40%), Query Frame = 0


Query: 35  DHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLASCRCS 94
           D  ET GAI     ANEFQP + N I SLQSQLR LQ RVKELEEEN KLSS LASC CS
Sbjct: 9   DITETTGAIRKTLEANEFQPFDGNQIASLQSQLRLLQDRVKELEEENSKLSSPLASCCCS 68

Query: 95  ------------------------------------------------------------ 154
                                                                       
Sbjct: 69  ERRMNFGDRSCSIEKSTESGTTKKKSVERTTGYNTRILDHCSKRYIALKVMYFGQRFYGF 128

Query: 155 ----------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSNLKD 214
                     ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+LYLRSNLKD
Sbjct: 129 ASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIALYLRSNLKD 188

Query: 215 PPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSARNNLDLHFHQAME 274
           PPN ENS HN EEQHDGEIDYVRVIN+VLP+DIRVLGWC VP+GFSARNNLDLHFHQAME
Sbjct: 189 PPNAENSCHNAEEQHDGEIDYVRVINKVLPNDIRVLGWCPVPVGFSARNNLDLHFHQAME 248

Query: 275 RAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPCDVR------------------- 334
           RAGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISPCDVR                   
Sbjct: 249 RAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISPCDVRLVFVSDLLVFFPIGLPVPC 308

Query: 335 -----GGLSSHHARCFEPWKDDHVKHPYIIAVM-----------------------EGNL 394
                   +  ++R    +    ++  + +A++                       EGNL
Sbjct: 309 LIDTCLAFAHFYSRICFAYVLQAIQTSFPLAIVKLMLLYSPIFGLSSLLAMFSPRTEGNL 368

Query: 395 LWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLV 414
           LWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPL TPRKPQYVMASE+PLV
Sbjct: 369 LWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLRTPRKPQYVMASENPLV 428

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BLAST of Lsi08G005930 vs. ExPASy TrEMBL
Match: A0A6J1JWD4 (tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488950 PE=3 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 1.9e-154
Identity = 305/472 (64.62%), Postives = 324/472 (68.64%), Query Frame = 0


Query: 31  EHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLAS 90
           EHSLDHR   GA+   SG +EFQP + NLI +LQSQLR LQGRVKELEEEN  LSSRLAS
Sbjct: 5   EHSLDHRGATGAMETTSGTDEFQPFDRNLIENLQSQLRLLQGRVKELEEENSNLSSRLAS 64

Query: 91  CRCS-------------------------------------------------------- 150
           C CS                                                        
Sbjct: 65  CYCSERRMNFDDGSSSIEKSKKYGSLKDKTTEKKAVEKTPGYNTRILDHCSKRYIALKVM 124

Query: 151 -------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVIS 210
                              ESEIFRAL+KARLL  GRKESCYSRCGRTD+GVSSVGQVI+
Sbjct: 125 YFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDKGVSSVGQVIA 184

Query: 211 LYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR--- 270
           LYLRSNLKDPPNGEN +HN +E HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSAR   
Sbjct: 185 LYLRSNLKDPPNGENGNHNSKEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSARFSC 244

Query: 271 -----------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISP 330
                       NL++    AME AGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISP
Sbjct: 245 LRRRYKYLFWGANLNI---SAMESAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISP 304

Query: 331 CDVRGGLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVF 390
           CDVR                           MEGNLLWAFNIEGSAFLWHQVRCMVAVVF
Sbjct: 305 CDVR---------------------------MEGNLLWAFNIEGSAFLWHQVRCMVAVVF 364

Query: 391 MVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLH 413
           MVGQGLEDPDVVDILLDP+ TPRKPQYVMASE+PLVLHSCEFEGVKFRCS+DAGEALQLH
Sbjct: 365 MVGQGLEDPDVVDILLDPVRTPRKPQYVMASENPLVLHSCEFEGVKFRCSTDAGEALQLH 424

[Close]

BLAST of Lsi08G005930 vs. ExPASy TrEMBL
Match: A0A6J1JQK1 (tRNA pseudouridine(38/39) synthase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488950 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 1.3e-153
Identity = 304/472 (64.41%), Postives = 323/472 (68.43%), Query Frame = 0


Query: 31  EHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLAS 90
           EHSLDHR   GA+   SG +EFQP + NLI +LQSQLR LQGRVK LEEEN  LSSRLAS
Sbjct: 5   EHSLDHRGATGAMETTSGTDEFQPFDRNLIENLQSQLRLLQGRVKVLEEENSNLSSRLAS 64

Query: 91  CRCS-------------------------------------------------------- 150
           C CS                                                        
Sbjct: 65  CYCSERRMNFDDGSSSIEKSKKYGSLKDKTTEKKAVEKTPGYNTRILDHCSKRYIALKVM 124

Query: 151 -------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVIS 210
                              ESEIFRAL+KARLL  GRKESCYSRCGRTD+GVSSVGQVI+
Sbjct: 125 YFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDKGVSSVGQVIA 184

Query: 211 LYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR--- 270
           LYLRSNLKDPPNGEN +HN +E HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSAR   
Sbjct: 185 LYLRSNLKDPPNGENGNHNSKEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSARFSC 244

Query: 271 -----------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISP 330
                       NL++    AME AGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISP
Sbjct: 245 LRRRYKYLFWGANLNI---SAMESAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISP 304

Query: 331 CDVRGGLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVF 390
           CDVR                           MEGNLLWAFNIEGSAFLWHQVRCMVAVVF
Sbjct: 305 CDVR---------------------------MEGNLLWAFNIEGSAFLWHQVRCMVAVVF 364

Query: 391 MVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLH 413
           MVGQGLEDPDVVDILLDP+ TPRKPQYVMASE+PLVLHSCEFEGVKFRCS+DAGEALQLH
Sbjct: 365 MVGQGLEDPDVVDILLDPVRTPRKPQYVMASENPLVLHSCEFEGVKFRCSTDAGEALQLH 424

[Close]

BLAST of Lsi08G005930 vs. ExPASy TrEMBL
Match: A0A6J1FEX0 (tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444871 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 4.8e-153
Identity = 305/472 (64.62%), Postives = 324/472 (68.64%), Query Frame = 0


Query: 31  EHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLAS 90
           EHSLD+R   GA+   SG +EFQP + NLI +LQS+LR LQGRVK LEEEN  LSSRLA+
Sbjct: 5   EHSLDYRGGTGAMETTSGTDEFQPFDGNLIGNLQSRLRLLQGRVKVLEEENSNLSSRLAT 64

Query: 91  CRCS-------------------------------------------------------- 150
           C CS                                                        
Sbjct: 65  CCCSERRMNFDDGSSSIEKSRKYGSLKDKTTKKKAVEKTPGYNTRILDHCSKRYIALKVM 124

Query: 151 -------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVIS 210
                              ESEIFRAL+KARLL  GRKESCYSRCGRTDRGVSSVGQVI+
Sbjct: 125 YFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDRGVSSVGQVIA 184

Query: 211 LYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR--- 270
           LYLRSNLKDPPNGEN +HN EE HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSAR   
Sbjct: 185 LYLRSNLKDPPNGENGNHNAEEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSARFSC 244

Query: 271 -----------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISP 330
                       NL++    AMERAGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISP
Sbjct: 245 LRRKYKYLFWGANLNI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISP 304

Query: 331 CDVRGGLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVF 390
           CDVR                           MEGNLLWAFNIEGSAFLWHQVRCMVAVVF
Sbjct: 305 CDVR---------------------------MEGNLLWAFNIEGSAFLWHQVRCMVAVVF 364

Query: 391 MVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLH 413
           MVGQGLEDPDVVDILLDPL TPRKPQYVMASE+PLVLHSCEFEGVKFRCS+DAGEALQLH
Sbjct: 365 MVGQGLEDPDVVDILLDPLRTPRKPQYVMASENPLVLHSCEFEGVKFRCSTDAGEALQLH 424

[Close]

BLAST of Lsi08G005930 vs. ExPASy TrEMBL
Match: A0A1S3C3Y8 (tRNA pseudouridine(38/39) synthase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496569 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 5.8e-151
Identity = 307/465 (66.02%), Postives = 319/465 (68.60%), Query Frame = 0


Query: 35  DHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLASCRCS 94
           D  ET GAI     ANEFQP + N I SLQSQLR LQ RVKELEEEN KLSS LASC CS
Sbjct: 9   DITETTGAIRKTLEANEFQPFDGNQIASLQSQLRLLQDRVKELEEENSKLSSPLASCCCS 68

Query: 95  ------------------------------------------------------------ 154
                                                                       
Sbjct: 69  ERRMNFGDRSCSIEKSTESGTTKKKSVERTTGYNTRILDHCSKRYIALKVMYFGQRFYGF 128

Query: 155 ----------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSNLKD 214
                     ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+LYLRSNLKD
Sbjct: 129 ASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIALYLRSNLKD 188

Query: 215 PPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR------------ 274
           PPN ENS HN EEQHDGEIDYVRVIN+VLP+DIRVLGWC VP+GFSAR            
Sbjct: 189 PPNAENSCHNAEEQHDGEIDYVRVINKVLPNDIRVLGWCPVPVGFSARFSCLRRKYKYFF 248

Query: 275 --NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPCDVRGGLSS 334
              NLD+    AMERAGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISPCDVR     
Sbjct: 249 WGANLDI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISPCDVR----- 308

Query: 335 HHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDP 394
                                  EGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDP
Sbjct: 309 ----------------------TEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDP 368

Query: 395 DVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYE 415
           DVVDILLDPL TPRKPQYVMASE+PLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTY+
Sbjct: 369 DVVDILLDPLRTPRKPQYVMASENPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYK 428

[Close]

BLAST of Lsi08G005930 vs. NCBI nr
Match: KAG6578858.1 (putative F-actin-capping protein subunit beta, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 909.8 bits (2350), Expect = 1.4e-260
Identity = 501/741 (67.61%), Postives = 524/741 (70.72%), Query Frame = 0


Query: 26  LRSRVEHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLS 85
           L    EHSLD+R   GA+   SG +EFQP + NLI +LQSQLR LQGRVKELEEEN  LS
Sbjct: 19  LMDGAEHSLDYRGGTGAMETTSGTDEFQPFDGNLIGNLQSQLRLLQGRVKELEEENSNLS 78

Query: 86  SRLASCRCS--------------------------------------------------- 145
           SRLASC CS                                                   
Sbjct: 79  SRLASCCCSERRMNFDDGSSSIEKSKKYGSLKDKTTKKKAVEKTPGYNTRILDHCSKRYI 138

Query: 146 ------------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSV 205
                                   ESEIFRALEKARLL  GRKESCYSRCGRTDRGVSSV
Sbjct: 139 ALKVMYFGRRFYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDRGVSSV 198

Query: 206 GQVISLYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFS 265
           GQVI+LYLRSNLKDPPNGEN +HN EE HDGEIDYVRV+NRVLP+DIRVLGWCTVP+GFS
Sbjct: 199 GQVIALYLRSNLKDPPNGENGNHNSEEHHDGEIDYVRVMNRVLPNDIRVLGWCTVPVGFS 258

Query: 266 AR--------------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMS 325
           AR               NL++    AMERAGKKFVGEHDFRNFCKM+AANVHNYRR IMS
Sbjct: 259 ARFSCLRRKYKYLFWGANLNI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRCIMS 318

Query: 326 FDISPCDVRGGLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCM 385
           FDISPCDVR                           MEGN LWAFNIEGSAFLWHQVRCM
Sbjct: 319 FDISPCDVR---------------------------MEGNPLWAFNIEGSAFLWHQVRCM 378

Query: 386 VAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGE 445
           VAVVFMVGQGLEDPDVVDILLDP+ TPRKPQYVMASE+PLVLHSCEFEGVKFRCS+DAGE
Sbjct: 379 VAVVFMVGQGLEDPDVVDILLDPVRTPRKPQYVMASENPLVLHSCEFEGVKFRCSTDAGE 438

Query: 446 ALQLHLSNEIRTYELQAAIFKEALLSCLPITNDGSSSDKRKLKKKNCHVALLSRPTE--- 505
           ALQLHL+NEIRTYELQAAIFKEALLSCLPITND S SD RK+KKK CHV LLSRPTE   
Sbjct: 439 ALQLHLTNEIRTYELQAAIFKEALLSCLPITNDESFSDNRKIKKKICHVPLLSRPTEPSY 498

Query: 506 -----------QNCVSFLCCVDFAVKNPLGKMEAAMGLMRRMPPKHSETALSALLTLLPH 565
                      +  VS  C      +     MEAAMGLMRRMPP+HSETALSALLTLLPH
Sbjct: 499 EERRAKLNSSSKKIVSPSCAALILRRKTQETMEAAMGLMRRMPPRHSETALSALLTLLPH 558

Query: 566 HSSDLLSQVDQPLQVLCDVDNGKEFILCEYNRDADSYRSPWSNKYHPPLEDGAMPSIELR 625
           HSSDLLSQVDQPLQ LCDVDNGKEFILCEYNRDADSYRSPWSNKYHPPLEDG+MPSIE+R
Sbjct: 559 HSSDLLSQVDQPLQALCDVDNGKEFILCEYNRDADSYRSPWSNKYHPPLEDGSMPSIEMR 618

Query: 626 KLEIEANE---------------------------------DKDGSKTGHGRRGFLQEGA 630
           KLEIEANE                                  KDGSKTGHGRRGFLQEGA
Sbjct: 619 KLEIEANEVFTIYRDQYYEGGISSVYMWEDDEESFVGCFLIKKDGSKTGHGRRGFLQEGA 678

[Close]

BLAST of Lsi08G005930 vs. NCBI nr
Match: XP_038884605.1 (tRNA pseudouridine(38/39) synthase isoform X2 [Benincasa hispida])

HSP 1 Score: 581.6 bits (1498), Expect = 8.9e-162
Identity = 320/467 (68.52%), Postives = 331/467 (70.88%), Query Frame = 0


Query: 31  EHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLAS 90
           EHSLD+RE+  AIGM SGANEFQP   N I SLQSQLR LQGRVKELEEEN KLSSR AS
Sbjct: 5   EHSLDYRESTEAIGMTSGANEFQPFNGNQIASLQSQLRLLQGRVKELEEENSKLSSRFAS 64

Query: 91  CRCS-------------------------------------------------------- 150
           CRCS                                                        
Sbjct: 65  CRCSERRMNFDDGSSSIGKSKESSTTKKKAVKKTAGYNTRILDHCSKRYIALKVMYFGQR 124

Query: 151 --------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRS 210
                         ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+LYLRS
Sbjct: 125 FYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIALYLRS 184

Query: 211 NLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR-------- 270
           NLKDPPNGENS HN EEQHDGEIDYVRVINR LP+DIRVLGWCTVP+GFSAR        
Sbjct: 185 NLKDPPNGENSYHNGEEQHDGEIDYVRVINRALPNDIRVLGWCTVPVGFSARFSCLRRKY 244

Query: 271 ------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPCDVRG 330
                  NL++    AMERAGKKFVGEHDFRNFCKM+AANVHNYRRRIMSFDISPCDVR 
Sbjct: 245 KYFFWGANLNI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRRIMSFDISPCDVR- 304

Query: 331 GLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQG 390
                                     MEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQG
Sbjct: 305 --------------------------MEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQG 364

Query: 391 LEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEI 413
           LEDPDVVDILL+PL TPRKPQYVMASE+PLVLHSCEFE VKFRCSSDAGEALQLHL NEI
Sbjct: 365 LEDPDVVDILLNPLRTPRKPQYVMASENPLVLHSCEFEHVKFRCSSDAGEALQLHLWNEI 424

[Close]

BLAST of Lsi08G005930 vs. NCBI nr
Match: XP_038884603.1 (tRNA pseudouridine(38/39) synthase isoform X1 [Benincasa hispida] >XP_038884604.1 tRNA pseudouridine(38/39) synthase isoform X1 [Benincasa hispida])

HSP 1 Score: 573.5 bits (1477), Expect = 2.4e-159
Identity = 319/470 (67.87%), Postives = 330/470 (70.21%), Query Frame = 0


Query: 31  EHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLAS 90
           EHSLD+RE+  AIGM SGANEFQP   N I SLQSQLR LQGRVKELEEEN KLSSR AS
Sbjct: 5   EHSLDYRESTEAIGMTSGANEFQPFNGNQIASLQSQLRLLQGRVKELEEENSKLSSRFAS 64

Query: 91  CRCS-------------------------------------------------------- 150
           CRCS                                                        
Sbjct: 65  CRCSERRMNFDDGSSSIGKSKESSTTKKKAVKKTAGYNTRILDHCSKRYIALKVMYFGQR 124

Query: 151 --------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRS 210
                         ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+LYLRS
Sbjct: 125 FYGFASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIALYLRS 184

Query: 211 NLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR-------- 270
           NLKDPPNGENS HN EEQHDGEIDYVRVINR LP+DIRVLGWCTVP+GFSAR        
Sbjct: 185 NLKDPPNGENSYHNGEEQHDGEIDYVRVINRALPNDIRVLGWCTVPVGFSARFSCLRRKY 244

Query: 271 ------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPCDVRG 330
                  NL++    AMERAGKKFVGEHDFRNFCKM+AANVHNYRRRIMSFDISPCDVR 
Sbjct: 245 KYFFWGANLNI---SAMERAGKKFVGEHDFRNFCKMDAANVHNYRRRIMSFDISPCDVR- 304

Query: 331 GLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQG 390
                                     MEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQG
Sbjct: 305 --------------------------MEGNLLWAFNIEGSAFLWHQVRCMVAVVFMVGQG 364

Query: 391 LEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEI 413
           LEDPDVVDILL+PL TPRKPQYVMASE+PLVLHSCEFE VKFRCSSDAGEALQLHL NEI
Sbjct: 365 LEDPDVVDILLNPLRTPRKPQYVMASENPLVLHSCEFEHVKFRCSSDAGEALQLHLWNEI 424

[Close]

BLAST of Lsi08G005930 vs. NCBI nr
Match: TYK04459.1 (tRNA pseudouridine(38/39) synthase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 8.6e-157
Identity = 316/497 (63.58%), Postives = 335/497 (67.40%), Query Frame = 0


Query: 35  DHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLASCRCS 94
           D  ET GAI     ANEFQP + N I SLQSQLR LQ RVKELEEEN KLSS LASC CS
Sbjct: 9   DITETTGAIRKTLEANEFQPFDGNQIASLQSQLRLLQDRVKELEEENSKLSSPLASCCCS 68

Query: 95  ------------------------------------------------------------ 154
                                                                       
Sbjct: 69  ERRMNFGDRSCSIEKSTESGTTKKKSVERTTGYNTRILDHCSKRYIALKVMYFGQRFYGF 128

Query: 155 ----------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSNLKD 214
                     ESEIFRALEKARLL  GRKESCYSRCGRTD+GVSSVGQVI+LYLRSNLKD
Sbjct: 129 ASEAQMEPTVESEIFRALEKARLLVGGRKESCYSRCGRTDKGVSSVGQVIALYLRSNLKD 188

Query: 215 PPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSARNNLDLHFHQAME 274
           PPN ENS HN EEQHDGEIDYVRVIN+VLP+DIRVLGWC VP+GFSARNNLDLHFHQAME
Sbjct: 189 PPNAENSCHNAEEQHDGEIDYVRVINKVLPNDIRVLGWCPVPVGFSARNNLDLHFHQAME 248

Query: 275 RAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISPCDVR------------------- 334
           RAGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISPCDVR                   
Sbjct: 249 RAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISPCDVRLVFVSDLLVFFPIGLPVPC 308

Query: 335 -----GGLSSHHARCFEPWKDDHVKHPYIIAVM-----------------------EGNL 394
                   +  ++R    +    ++  + +A++                       EGNL
Sbjct: 309 LIDTCLAFAHFYSRICFAYVLQAIQTSFPLAIVKLMLLYSPIFGLSSLLAMFSPRTEGNL 368

Query: 395 LWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLV 414
           LWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPL TPRKPQYVMASE+PLV
Sbjct: 369 LWAFNIEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLRTPRKPQYVMASENPLV 428

[Close]

BLAST of Lsi08G005930 vs. NCBI nr
Match: XP_022992675.1 (tRNA pseudouridine(38/39) synthase isoform X1 [Cucurbita maxima] >XP_022992676.1 tRNA pseudouridine(38/39) synthase isoform X1 [Cucurbita maxima])

HSP 1 Score: 556.2 bits (1432), Expect = 4.0e-154
Identity = 305/472 (64.62%), Postives = 324/472 (68.64%), Query Frame = 0


Query: 31  EHSLDHRETAGAIGMISGANEFQPLEENLIVSLQSQLRFLQGRVKELEEENLKLSSRLAS 90
           EHSLDHR   GA+   SG +EFQP + NLI +LQSQLR LQGRVKELEEEN  LSSRLAS
Sbjct: 5   EHSLDHRGATGAMETTSGTDEFQPFDRNLIENLQSQLRLLQGRVKELEEENSNLSSRLAS 64

Query: 91  CRCS-------------------------------------------------------- 150
           C CS                                                        
Sbjct: 65  CYCSERRMNFDDGSSSIEKSKKYGSLKDKTTEKKAVEKTPGYNTRILDHCSKRYIALKVM 124

Query: 151 -------------------ESEIFRALEKARLLGVGRKESCYSRCGRTDRGVSSVGQVIS 210
                              ESEIFRAL+KARLL  GRKESCYSRCGRTD+GVSSVGQVI+
Sbjct: 125 YFGRRFYGFASEAQMEPTVESEIFRALDKARLLVGGRKESCYSRCGRTDKGVSSVGQVIA 184

Query: 211 LYLRSNLKDPPNGENSDHN-EEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSAR--- 270
           LYLRSNLKDPPNGEN +HN +E HDGEIDYVRVINRVLP+DIRVLGWCTVP+GFSAR   
Sbjct: 185 LYLRSNLKDPPNGENGNHNSKEHHDGEIDYVRVINRVLPNDIRVLGWCTVPVGFSARFSC 244

Query: 271 -----------NNLDLHFHQAMERAGKKFVGEHDFRNFCKMNAANVHNYRRRIMSFDISP 330
                       NL++    AME AGKKFVGEHDFRNFCKM+AANVHNYRR IMSFDISP
Sbjct: 245 LRRRYKYLFWGANLNI---SAMESAGKKFVGEHDFRNFCKMDAANVHNYRRCIMSFDISP 304

Query: 331 CDVRGGLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVRCMVAVVF 390
           CDVR                           MEGNLLWAFNIEGSAFLWHQVRCMVAVVF
Sbjct: 305 CDVR---------------------------MEGNLLWAFNIEGSAFLWHQVRCMVAVVF 364

Query: 391 MVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFRCSSDAGEALQLH 413
           MVGQGLEDPDVVDILLDP+ TPRKPQYVMASE+PLVLHSCEFEGVKFRCS+DAGEALQLH
Sbjct: 365 MVGQGLEDPDVVDILLDPVRTPRKPQYVMASENPLVLHSCEFEGVKFRCSTDAGEALQLH 424

[Close]

BLAST of Lsi08G005930 vs. TAIR 10
Match: AT1G34150.1 (Pseudouridine synthase family protein )

HSP 1 Score: 332.4 bits (851), Expect = 8.8e-91
Identity = 192/436 (44.04%), Postives = 246/436 (56.42%), Query Frame = 0


Query: 61  VSLQSQLRFLQGRVKELEEENLKLSSRLASCRCS-------------------------- 120
           ++ +++L FL+ RVKELE EN KL S+++SC+C                           
Sbjct: 19  IAKETELVFLRNRVKELEVENAKLLSQVSSCQCQQMEVKHDRSLSDSSSLVRRRRVRKGD 78

Query: 121 --------------------------------------ESEIFRALEKARLLGVGRKESC 180
                                                 ESE+F+ALE+ RLL   +K+SC
Sbjct: 79  KNSIPSHLISKRYVALKIMYFGKRFYGFSAEAQMEPSIESEVFKALERTRLLVGDKKDSC 138

Query: 181 YSRCGRTDRGVSSVGQVISLYLRSNLKDPPNGENSDHNEEQHD-GEIDYVRVINRVLPSD 240
           YSRCGRTD+GVSS GQVI+L+LRS LK PP    +  N    +  E DYVRV+NR LP D
Sbjct: 139 YSRCGRTDKGVSSTGQVIALFLRSRLKSPPGDSKAQVNGRTGERPEYDYVRVLNRALPDD 198

Query: 241 IRVLGWCTVPIGFSA--------------RNNLDLHFHQAMERAGKKFVGEHDFRNFCKM 300
           IRV+GW   PI F A              R NL+L    AM+ AGKKF+GEHDFRNFCKM
Sbjct: 199 IRVIGWSPAPIDFHARFSCYAREYKYFFWRQNLNL---SAMDFAGKKFIGEHDFRNFCKM 258

Query: 301 NAANVHNYRRRIMSFDISPCDVRGGLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFN 360
           + ANVH Y RR+  F++SPC      +SH                      EG+ L  F 
Sbjct: 259 DVANVHCYTRRVTFFEVSPCQ-----NSH----------------------EGDQLCTFT 318

Query: 361 IEGSAFLWHQVRCMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCE 413
           + GSAFLWHQ+RCMVAV+FM+GQG+E  DV+D LLD   TPRKPQY++ASE PLVL +CE
Sbjct: 319 MRGSAFLWHQIRCMVAVLFMIGQGVESVDVIDTLLDTKKTPRKPQYLLASEIPLVLRTCE 378

[Close]

BLAST of Lsi08G005930 vs. TAIR 10
Match: AT1G71790.1 (Subunits of heterodimeric actin filament capping protein Capz superfamily )

HSP 1 Score: 300.4 bits (768), Expect = 3.7e-81
Identity = 155/230 (67.39%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 433 MEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEYN 492
           MEAA+GL+RRMPPK SETALSALL+L+P HSSDLLSQVD PLQVL D+++GK+FILCEYN
Sbjct: 1   MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query: 493 RDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANE----------------------- 552
           RDADSYRSPWSNKY PPLED   PS ELRKLE+EAN+                       
Sbjct: 61  RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 553 ----------DKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLSLTT 612
                      KDGSK+GHGRRG L+EGAWDAIHVI+V  E+E  A YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query: 613 DNNAAGTFSLSGSIRRQMKMKLSVAEGHLCNMGRMIEEMESKLRNSLDQV 630
           D+ ++G F LSGSIRRQMKM+L+VA+GHLCNMGRMIEE+E KLRNSLDQV
Sbjct: 181 DDESSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQV 230

[Close]

BLAST of Lsi08G005930 vs. TAIR 10
Match: AT3G06950.1 (Pseudouridine synthase family protein )

HSP 1 Score: 53.9 bits (128), Expect = 6.0e-07
Identity = 73/295 (24.75%), Postives = 108/295 (36.61%), Query Frame = 0


Query: 86  SRLASCRCSES--EIFRALEKA--RLLGVGRKESCYSRCGRTDRGVSSVGQVISLYLRSN 145
           +R A  +  ES   I   LEKA  ++  +GRKE      GRTD GV + GQV      ++
Sbjct: 52  TRFAGWQYQESPPTIQSMLEKALIQITELGRKELQLIGAGRTDAGVHAWGQV------AH 111

Query: 146 LKDPPNGENSDHNEEQHDGEIDYVRVINRVLPSDIRVLGWCTVPIGFSARNNLDLHFHQ- 205
              P N  + D           +   +N +LP DIRV         F AR +     ++ 
Sbjct: 112 FVTPFNYTSLD----------SFHAALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRY 171

Query: 206 --------------------------AMERAGKKFVGEHDFRNFCKMNAAN-VHNYRRRI 265
                                      M  A   FVG+HDF  F      + V +  + I
Sbjct: 172 QIYNDTFMDPFQRHWAYHCAYKLNASKMREAANLFVGKHDFSAFANATREDGVPDPLKTI 231

Query: 266 MSFDISPCDVRGGLSSHHARCFEPWKDDHVKHPYIIAVMEGNLLWAFNIEGSAFLWHQVR 325
             FD+                                +  G+LL    +EGS FL+ QVR
Sbjct: 232 SRFDV--------------------------------IQMGSLL-QLEVEGSGFLYRQVR 291

Query: 326 CMVAVVFMVGQGLEDPDVVDILLDPLSTPRKPQYVMASESPLVLHSCEFEGVKFR 349
            MVA++  +G+   D D+V ++L+        +Y     SP   H      VK++
Sbjct: 292 NMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTSLPASP---HGLCLVSVKYK 294

The following BLAST results are available for this feature:

BLAST of Lsi08G005930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9G7	5.2e-80	67.39	Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3SX07	2.4e-48	42.86	tRNA pseudouridine(38/39) synthase OS=Bos taurus OX=9913 GN=PUS3 PE=2 SV=1	[more]
Q9BZE2	8.9e-48	42.35	tRNA pseudouridine(38/39) synthase OS=Homo sapiens OX=9606 GN=PUS3 PE=1 SV=3	[more]
P14315	7.6e-47	45.81	F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus OX=9031 G...	[more]
P79136	9.9e-47	45.81	F-actin-capping protein subunit beta OS=Bos taurus OX=9913 GN=CAPZB PE=1 SV=1	[more]

BLAST of Lsi08G005930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C242	4.2e-157	63.58	tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1JWD4	1.9e-154	64.62	tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1JQK1	1.3e-153	64.41	tRNA pseudouridine(38/39) synthase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FEX0	4.8e-153	64.62	tRNA pseudouridine(38/39) synthase isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3C3Y8	5.8e-151	66.02	tRNA pseudouridine(38/39) synthase isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Lsi08G005930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578858.1	1.4e-260	67.61	putative F-actin-capping protein subunit beta, partial [Cucurbita argyrosperma s...	[more]
XP_038884605.1	8.9e-162	68.52	tRNA pseudouridine(38/39) synthase isoform X2 [Benincasa hispida]	[more]
XP_038884603.1	2.4e-159	67.87	tRNA pseudouridine(38/39) synthase isoform X1 [Benincasa hispida] >XP_038884604....	[more]
TYK04459.1	8.6e-157	63.58	tRNA pseudouridine(38/39) synthase isoform X1 [Cucumis melo var. makuwa]	[more]
XP_022992675.1	4.0e-154	64.62	tRNA pseudouridine(38/39) synthase isoform X1 [Cucurbita maxima] >XP_022992676.1...	[more]

BLAST of Lsi08G005930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34150.1	8.8e-91	44.04	Pseudouridine synthase family protein	[more]
AT1G71790.1	3.7e-81	67.39	Subunits of heterodimeric actin filament capping protein Capz superfamily	[more]
AT3G06950.1	6.0e-07	24.75	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..94
None	No IPR available	PANTHER	PTHR11142:SF5	TRNA PSEUDOURIDINE(38/39) SYNTHASE	coord: 95..415
IPR001698	F-actin-capping protein subunit beta	PRINTS	PR00192	FACTINCAPB	coord: 484..510 score: 75.46 coord: 524..551 score: 28.57 coord: 453..474 score: 56.25 coord: 432..452 score: 41.67
IPR001698	F-actin-capping protein subunit beta	PFAM	PF01115	F_actin_cap_B	coord: 545..631 e-value: 1.1E-23 score: 84.2 coord: 433..529 e-value: 3.0E-37 score: 128.6
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 81..191 e-value: 2.9E-19 score: 71.2
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 192..383 e-value: 1.0E-36 score: 128.4
IPR043175	F-actin-capping protein subunit beta, N-terminal domain	GENE3D	1.20.58.570		coord: 431..516 e-value: 1.0E-36 score: 126.8
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 206..343 e-value: 3.4E-28 score: 98.2
IPR042276	F-actin-capping protein subunit alpha/beta, domain 2	GENE3D	3.90.1150.210		coord: 531..638 e-value: 2.5E-26 score: 94.6
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 95..415
IPR019771	F-actin capping protein, beta subunit, conserved site	PROSITE	PS00231	F_ACTIN_CAPPING_BETA	coord: 489..494
IPR037282	F-actin-capping protein subunit alpha/beta	SUPERFAMILY	90096	Subunits of heterodimeric actin filament capping protein Capz	coord: 432..631
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 95..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G005930.1	Lsi08G005930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051016	barbed-end actin filament capping
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008033	tRNA processing
biological_process	GO:0030036	actin cytoskeleton organization
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0008290	F-actin capping protein complex
molecular_function	GO:0003779	actin binding
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding