Homology
BLAST of Lsi08G005870 vs. ExPASy Swiss-Prot
Match:
O64380 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=1)
HSP 1 Score: 705.7 bits (1820), Expect = 5.1e-202
Identity = 392/661 (59.30%), Postives = 481/661 (72.77%), Query Frame = 0
Query: 1 MAATVPTPATSASVQT-AAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVA 60
M VP+P SVQ +IP + V +SSLY GDLD V E L +LF VA
Sbjct: 14 MVDQVPSPTAQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVA 73
Query: 61 QVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRK 120
VVS+RVCRDQ RR SLGYAY+NFS+ DA AME LN+TP+ +PIRIM+SNRDPS R
Sbjct: 74 NVVSVRVCRDQNRR-SLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRL 133
Query: 121 SGYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESS 180
SG NIFIKNLD SIDNKAL +TF++FGT+LSCKVA+D G+SKGYGFVQFE EESA+++
Sbjct: 134 SGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAA 193
Query: 181 IIRLNGMLLNDKQVYVGHFIRHQERIRANGS---QFTNVYVKNLPETTTDDDLKNLFAAH 240
I +LNGML+NDKQV+VGHFIR QER R + +FTNVYVKNLP+ +D+L+ F
Sbjct: 194 IDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKF 253
Query: 241 GAITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAERE 300
G I+SA+VM D +G S+CFGFVNF+ T++AA+AVEK+NG LGDD +LYVGRAQ+K+ERE
Sbjct: 254 GVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDD-VLYVGRAQKKSERE 313
Query: 301 AELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLS 360
EL+ KFEQER +RFEK QGANLY+KNLDD +DDEKLKE+FSEYG +TS KVML+ G+S
Sbjct: 314 EELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMS 373
Query: 361 KGSGFVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGIS 420
+G GFVA+S+P+EA RAL+EMNGKM GRKPLY+A+AQRKE+R+A LQA F+QIRA
Sbjct: 374 RGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIRA----- 433
Query: 421 SLPSGMPGFH--PGAPRV-TPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGP-NF 480
P M GFH PG P PQ +Y GQ +VP QP GYGFQPQ M GMRPG GP NF
Sbjct: 434 --PGPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGPGNF 493
Query: 481 LMPYQFQRQGQPGPRSGMRRGGNS--QPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRY 540
++PY QRQ Q GPR G RRG + Q + QQQ L+ R G RY
Sbjct: 494 IVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQ---------------LMHRNPSPGMRY 553
Query: 541 MN---NARNGLEPPILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASAT 600
MN N RNG++ + PQG++ P++PL D+S +S Q++ +P S L S+LASA+
Sbjct: 554 MNGASNGRNGMDSSV-PQGILPPIIPLPIDASSISH-----QKAPLLPISKLTSSLASAS 613
Query: 601 PENQRVMLGEQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVL 649
P ++ MLGEQLYPLVER EP H AKVTGMLLEMDQ E+LHL+ESP+ LKSKV+EA++VL
Sbjct: 614 PADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVL 644
BLAST of Lsi08G005870 vs. ExPASy Swiss-Prot
Match:
Q05196 (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=3)
HSP 1 Score: 679.9 bits (1753), Expect = 3.0e-194
Identity = 380/675 (56.30%), Postives = 483/675 (71.56%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
+AA P P + S Q AA+ + +SSLYVGDLD SVNE LL+LF QVA
Sbjct: 26 VAAAAPPPFPAVS-QVAAVAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAP 85
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
V ++RVCRD T R SLGYAYVNF++ +DA AME LN+ P+ +PIRIM+SNRDPS R S
Sbjct: 86 VHNLRVCRDLTHR-SLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLS 145
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
G N+FIKNLD SIDNKAL++TF++FGT+LSCKVA+D G+SKGYGFVQFE EE+A+++I
Sbjct: 146 GKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAI 205
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGS---QFTNVYVKNLPETTTDDDLKNLFAAHG 240
+LNGMLLNDKQV+VGHF+R Q+R R+ FTNVYVKNLP+ TDD+LK F +G
Sbjct: 206 DKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYG 265
Query: 241 AITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREA 300
I+SA+VM D +G S+ FGFVNF + ++AA AVEK+NG LG+D +LYVGRAQ+K++RE
Sbjct: 266 DISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGED-VLYVGRAQKKSDREE 325
Query: 301 ELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSK 360
EL+ KFEQER SRFEKLQG+NLY+KNLDD ++DEKLKE+FSEYG +TSCKVM++ GLS+
Sbjct: 326 ELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSR 385
Query: 361 GSGFVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISS 420
G GFVA+S+P+EA A+ EMNGKM GRKPLYVA+AQRKEER+A LQ+ F QIR+ G +S
Sbjct: 386 GFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSP 445
Query: 421 LPSGMPGFH---PGAPRVTPQQ-VYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMG-PNF 480
+PS M GFH PG P P ++ G GLVP QP GYG+Q Q M GMRPG G PNF
Sbjct: 446 VPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGPPNF 505
Query: 481 LMPYQFQRQGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMN 540
+MP+ QRQ QPGPR G RRG N+ QQQF Q +L + + +
Sbjct: 506 MMPFPLQRQTQPGPRVGFRRGANNM---QQQFQQQQ----------MLQQNASRFMGGAG 565
Query: 541 NARNGLEPPILPQGLVGPMMPLAFDSSGVS-SSPIDIQRSRAVPTSTLASALASATPENQ 600
N RNG+E PQG++ PL ++S S ++P + + S LAS LA A+P+
Sbjct: 566 NRRNGMEAS-APQGII----PLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKH 625
Query: 601 RVMLGEQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKAL 660
MLG+ LYPLVE+ EP +AAKVTGMLLEMDQ E+LHL+ESP+ LK+KV+EA++VLR++
Sbjct: 626 PRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSA 679
Query: 661 SEPELSDQLGALALT 667
+S AL+
Sbjct: 686 DPAAVSSVDDQFALS 679
BLAST of Lsi08G005870 vs. ExPASy Swiss-Prot
Match:
P42731 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1)
HSP 1 Score: 636.0 bits (1639), Expect = 4.9e-181
Identity = 366/668 (54.79%), Postives = 464/668 (69.46%), Query Frame = 0
Query: 7 TPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRV 66
TP S + T+A P+T AT F ++SLYVGDLD +V + QL + FGQ+ VV++RV
Sbjct: 10 TPNGSTAAVTSA--PATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRV 69
Query: 67 CRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYANIF 126
CRD R+SLGY YVNF++ QDA A++ LN+ P+ GKPIR+M S+RDPS+R+SG NIF
Sbjct: 70 CRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIF 129
Query: 127 IKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSIIRLNGM 186
IKNLD SID+KALHDTF++FG ++SCKVA+DS+GQSKGYGFVQ+ NEESA+ +I +LNGM
Sbjct: 130 IKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGM 189
Query: 187 LLNDKQVYVGHFIRHQER-IRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAITSAIVM 246
LLNDKQVYVG F+R QER AN ++FTNVYVKNL E+TTDDDLKN F +G ITSA+VM
Sbjct: 190 LLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVM 249
Query: 247 TDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELKAKFEQ 306
D GKSK FGFVNF+N D AA AVE LNG DDK YVGRAQ+K+ERE EL+ ++EQ
Sbjct: 250 KDGEGKSKGFGFVNFENADDAARAVESLNGHKF-DDKEWYVGRAQKKSERETELRVRYEQ 309
Query: 307 ERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVAFS 366
K +K Q +NLY+KNLD I DEKLKE+FS +GT+TS KVM D +G SKGSGFVAF+
Sbjct: 310 NLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFA 369
Query: 367 SPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPSGMPGF 426
+P+EAT A+++++GKM KPLYVA+AQRKE+R+ RLQAQF+Q+R S+ MP +
Sbjct: 370 TPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVY 429
Query: 427 HPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMG--PNFLMPYQFQRQGQ 486
PG P + QQ+++GQ P ++PPQP GYG+Q QL+ GMRPG G P+F MP +Q +
Sbjct: 430 PPGGPGI-GQQMFYGQAPPAMIPPQP-GYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQR 489
Query: 487 PGPRSGMRRGG-----NSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGL 546
PG G R GG P+ QQQ GR+ FRY
Sbjct: 490 PG--GGRRPGGIQHSQQQNPMMQQQMHPRGRM-----------------FRY-------- 549
Query: 547 EPPILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQ 606
PQG G SG P D+ + + LAS L++ATPE QR MLGE
Sbjct: 550 -----PQGRGG---------SG-DVPPYDMGNNMPLTIGALASNLSNATPEQQRTMLGEV 609
Query: 607 LYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSD 666
LYPLVE++E AAKVTGMLLEMDQ EVLHL+ESP+ LK+KVAEAM+VLR +++ ++
Sbjct: 610 LYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLR-SVAAGGATE 629
BLAST of Lsi08G005870 vs. ExPASy Swiss-Prot
Match:
Q9FXA2 (Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=1)
HSP 1 Score: 602.8 bits (1553), Expect = 4.6e-171
Identity = 353/678 (52.06%), Postives = 451/678 (66.52%), Query Frame = 0
Query: 5 VPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSI 64
V P +A+ AA + A ++SLYVGDLD +V + QL E F Q QVVS+
Sbjct: 15 VAVPGAAAAEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSV 74
Query: 65 RVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYAN 124
RVCRD T R+SLGY YVN+++ QDA A+ LNF +NG+ IR+M S RDPS+RKSG N
Sbjct: 75 RVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGN 134
Query: 125 IFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSIIRLN 184
IFIKNLD SID+KALH+TF+ FG +LSCKVA+D +GQSKGYGFVQ++ +E+A+ +I +LN
Sbjct: 135 IFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLN 194
Query: 185 GMLLNDKQVYVGHFIRHQERIRANGS-QFTNVYVKNLPETTTDDDLKNLFAAHGAITSAI 244
GMLLNDKQVYVG F+ +R + +FTNVYVKNL E+ +D++L +F G TS +
Sbjct: 195 GMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCV 254
Query: 245 VMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELKAKF 304
+M D GKSK FGFVNF+N+D AA AV+ LNG DDK +VG+AQ+K+ERE ELK KF
Sbjct: 255 IMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTF-DDKEWFVGKAQKKSERETELKQKF 314
Query: 305 EQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVA 364
EQ K +K QG+NLY+KNLD+ + D+KL+E F+ +GTITSCKVM D G+S+GSGFVA
Sbjct: 315 EQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVA 374
Query: 365 FSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPSGMP 424
FS+P+EATRA+ EMNGKM KPLYVA+AQRKE+RKARLQAQF+Q+R ++ M
Sbjct: 375 FSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQ 434
Query: 425 GFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMG--PNFLMP------ 484
+ PG P + QQ+++GQG P ++ PQP G+G+Q QL+ GMRPG PNF MP
Sbjct: 435 MYPPGGPPM-GQQLFYGQGPPAMI-PQP-GFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQ 494
Query: 485 YQFQRQGQPGPRSGMRRGGNSQ-----PVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRY 544
Q Q+Q Q G RRG Q P+ QQQ GR+ +RY
Sbjct: 495 QQQQQQQQQQRPGGGRRGALPQPQQPSPMMQQQMHPRGRM-----------------YRY 554
Query: 545 MNNARNGLEPPILPQGLVGPMMPLAFD-SSGVSSSPIDIQRSRAVPTSTLASALASATPE 604
N + P M+ + +D SSG D S+ VP LA+ LA+A PE
Sbjct: 555 PQRDVNTMPGP------TQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALATRLANAAPE 614
Query: 605 NQRVMLGEQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRK 664
QR MLGE LYPLVE+LEP AAKVTGMLLEMDQ EVLHL+ESP+ LK+KV EAM+VLR
Sbjct: 615 QQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLRS 665
Query: 665 ALSEPE--LSDQLGALAL 666
+ +DQL +L+L
Sbjct: 675 VAQQQAGGAADQLASLSL 665
BLAST of Lsi08G005870 vs. ExPASy Swiss-Prot
Match:
O22173 (Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=1)
HSP 1 Score: 595.1 bits (1533), Expect = 9.7e-169
Identity = 341/657 (51.90%), Postives = 441/657 (67.12%), Query Frame = 0
Query: 6 PTPATSASVQTAAIPPSTGTVATGGGFLSS---SLYVGDLDQSVNEGQLLELFGQVAQVV 65
P + TA+ P G G G SLYVGDLD +V + QL + F +V QVV
Sbjct: 14 PPAVVNDGAATASATPGIGVGGGGDGVTHGALCSLYVGDLDFNVTDSQLYDYFTEVCQVV 73
Query: 66 SIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGY 125
S+RVCRD SLGY YVN+S+ DA AM+ LN++ +NGK IRI S+RD S R+SG
Sbjct: 74 SVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGV 133
Query: 126 ANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSIIR 185
N+F+KNLD S+DNK LH+ F+ GT++SCKVA D GQS+GYGFVQF+ E+SA+++I +
Sbjct: 134 GNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEK 193
Query: 186 LNGMLLNDKQVYVGHFIRHQER-IRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAITS 245
LNG +LNDKQ++VG F+R +ER A+ +FTNVYVKNL E TTDD+LK F +G+I+S
Sbjct: 194 LNGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISS 253
Query: 246 AIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELKA 305
A+VM D +GKS+CFGFVNF+N + AA AVE LNG DDK YVG+AQ+K+ERE EL
Sbjct: 254 AVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKF-DDKEWYVGKAQKKSERELELSR 313
Query: 306 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGF 365
++EQ K G NLY+KNLDD + DEKL+ELF+E+GTITSCKVM D G SKGSGF
Sbjct: 314 RYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGF 373
Query: 366 VAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPSG 425
VAFS+ EA+R LNEMNGKM G KPLYVA+AQRKEER+A+LQAQF+Q+R I +
Sbjct: 374 VAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMR-PAFIPGVGPR 433
Query: 426 MPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGM--GPNFLMPYQFQ 485
MP F GAP + QQ+++GQG P ++P QP G+G+QPQL+ GMRP GP
Sbjct: 434 MPIFTGGAPGL-GQQIFYGQGPPPIIPHQP-GFGYQPQLVPGMRPAFFGGP-------MM 493
Query: 486 RQGQPGPRSGMRRGG-------NSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMN 545
+ GQ GPR G RR G + QP+P Q R G+G+RY +
Sbjct: 494 QPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPR---------------GRGYRYPS 553
Query: 546 NARNGLEPPILPQG-LVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQ 605
RN +P G + G M+P+A+D + + S+ + LA++LA+ATP Q
Sbjct: 554 GGRN------MPDGPMPGGMVPVAYDMN-------VMPYSQPMSAGQLATSLANATPAQQ 613
Query: 606 RVMLGEQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLR 649
R +LGE LYPLV+++E HAAKVTGMLLEMDQ EVLHL+ESP+ L +KV+EA++VLR
Sbjct: 614 RTLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLR 631
BLAST of Lsi08G005870 vs. ExPASy TrEMBL
Match:
A0A1S3C568 (Polyadenylate-binding protein OS=Cucumis melo OX=3656 GN=LOC103496577 PE=3 SV=1)
HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 614/667 (92.05%), Postives = 630/667 (94.45%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MAATVP PAT+A+VQTA IPP TG VATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ
Sbjct: 1 MAATVPAPATAATVQTAVIPPPTGAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
GYAN+FIKNLD SIDNKAL DTFA FG VLSCKVA+DSNGQSKGYGFVQFE+EESAE SI
Sbjct: 121 GYANVFIKNLDLSIDNKALRDTFAAFGPVLSCKVAVDSNGQSKGYGFVQFESEESAEISI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
+LNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHG IT
Sbjct: 181 EKLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGTIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNG+VLGDDKILYVGRAQRKAEREAELK
Sbjct: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGTVLGDDKILYVGRAQRKAEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSSPDEAT+ALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS
Sbjct: 361 FVAFSSPDEATKALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGA RV+PQQ+Y+GQGNPGL PPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR
Sbjct: 421 GIPGFHPGA-RVSPQQMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLEP 540
QGQPGPRSGMRRGGNSQP+PQQQ L LRG GQGFRYMNNARNGLE
Sbjct: 481 QGQPGPRSGMRRGGNSQPLPQQQ---------------LPLRGFGQGFRYMNNARNGLES 540
Query: 541 PILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQLY 600
P+LPQGLV PMMPLAFD SGVSS P DIQR+RAVPTSTLASALASATPENQRVMLGEQLY
Sbjct: 541 PVLPQGLVSPMMPLAFDGSGVSSPPNDIQRTRAVPTSTLASALASATPENQRVMLGEQLY 600
Query: 601 PLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSDQL 660
PLVERLEP HAAKVTGMLLEMDQPEVLHLIESP+DLKSKVAEAMEVLRKA SEPELSDQL
Sbjct: 601 PLVERLEPSHAAKVTGMLLEMDQPEVLHLIESPEDLKSKVAEAMEVLRKASSEPELSDQL 651
Query: 661 GALALTK 668
GALALTK
Sbjct: 661 GALALTK 651
BLAST of Lsi08G005870 vs. ExPASy TrEMBL
Match:
A0A6J1BXU1 (Polyadenylate-binding protein OS=Momordica charantia OX=3673 GN=LOC111006278 PE=3 SV=1)
HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 571/668 (85.48%), Postives = 617/668 (92.37%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MAA V T+A VQ AAIPP G+ ATG GFLSSSLYVGDLDQSVNEGQLLE+FGQVAQ
Sbjct: 1 MAAAVQASVTAAQVQPAAIPPPVGSAATGAGFLSSSLYVGDLDQSVNEGQLLEVFGQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQTRRQSLGYAYVNFS+HQDA NAME LNFTPVNGKPIRIMISNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTRRQSLGYAYVNFSNHQDASNAMELLNFTPVNGKPIRIMISNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
G+AN+FIKNLD SIDNKALHDTFA FGTVLSCKVA+DSNGQSKGYGFVQFE+EE+AES+I
Sbjct: 121 GHANVFIKNLDISIDNKALHDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEEAAESAI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
IRLNGML+NDKQVYVGHFIRHQERIRANGS FTNVYVKNLPETTTDDDLK++FAAHG+IT
Sbjct: 181 IRLNGMLINDKQVYVGHFIRHQERIRANGSMFTNVYVKNLPETTTDDDLKDIFAAHGSIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SA+VM DSNGKS+CFGFVNFQ +D+AA AVEKLNG++LGDDK+LYVGRAQRK+EREAELK
Sbjct: 241 SAVVMRDSNGKSRCFGFVNFQTSDAAAVAVEKLNGTILGDDKVLYVGRAQRKSEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AK+EQER SRFEKLQGANLYIKN+DDH+DDEKLKELFSE+GTITSCKVMLDQHGLSKGSG
Sbjct: 301 AKYEQERLSRFEKLQGANLYIKNIDDHVDDEKLKELFSEFGTITSCKVMLDQHGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSS +EAT+ALNEMNGKM GRKPLYVAVAQRKEERKARLQAQFAQIRA GG+SSLPS
Sbjct: 361 FVAFSSSEEATKALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGMSSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGAPR+ PQQ+Y+GQGN GLVPPQPAGYGFQPQLM+GMRPGM PN+++PYQFQR
Sbjct: 421 GIPGFHPGAPRLAPQQMYYGQGN-GLVPPQPAGYGFQPQLMTGMRPGMAPNYMVPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLEP 540
QGQPG GMRRGGNSQPV QQQ ++LRGSGQGFRYMNNARNGLE
Sbjct: 481 QGQPGRGPGMRRGGNSQPVQQQQ---------------MVLRGSGQGFRYMNNARNGLES 540
Query: 541 PILPQGLVG-PMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQL 600
P+LPQGLVG PMMPLAF+SSGV+SSPIDIQRSR VPTSTLASALASATPENQRVMLGEQL
Sbjct: 541 PVLPQGLVGPPMMPLAFESSGVTSSPIDIQRSRTVPTSTLASALASATPENQRVMLGEQL 600
Query: 601 YPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSDQ 660
YPLV+RLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLK+KVAEAMEVLRKA SEPEL+DQ
Sbjct: 601 YPLVDRLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKNKVAEAMEVLRKATSEPELTDQ 652
Query: 661 LGALALTK 668
L +LAL K
Sbjct: 661 LTSLALNK 652
BLAST of Lsi08G005870 vs. ExPASy TrEMBL
Match:
A0A0A0KEB0 (Polyadenylate-binding protein OS=Cucumis sativus OX=3659 GN=Csa_6G052760 PE=3 SV=1)
HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 581/667 (87.11%), Postives = 597/667 (89.51%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MAATVP PAT+A+VQTA IPP T VATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ
Sbjct: 1 MAATVPAPATAATVQTAVIPPPTVAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
GYAN+FIKNLD SIDNKAL DTFA FGTVLSCKVA+DSNGQSKGYGFVQFE+EESAE SI
Sbjct: 121 GYANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
+LNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFA HG IT
Sbjct: 181 EKLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKL+G+VLGDDK LYVGRAQRKAEREAELK
Sbjct: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCK
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCK------------- 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
LNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRA GGISSLPS
Sbjct: 361 -------------LNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGISSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGA RV+PQQ+Y+GQGNPGL PPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR
Sbjct: 421 GIPGFHPGAARVSPQQMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLEP 540
QGQPGPR G+RRGGNSQP+PQQQ L LRG GQ FRYMNNARNGLE
Sbjct: 481 QGQPGPRLGVRRGGNSQPLPQQQ---------------LPLRGYGQSFRYMNNARNGLET 540
Query: 541 PILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQLY 600
P+LPQGLV PMMPLAFD SGVSS P DIQRSRAVPTSTLASALASA+ ENQRVMLGEQLY
Sbjct: 541 PVLPQGLVSPMMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALASASLENQRVMLGEQLY 600
Query: 601 PLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSDQL 660
PLVERLEP HAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKA SEPELSDQL
Sbjct: 601 PLVERLEPSHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKASSEPELSDQL 626
Query: 661 GALALTK 668
GAL LTK
Sbjct: 661 GALTLTK 626
BLAST of Lsi08G005870 vs. ExPASy TrEMBL
Match:
A0A6J1H757 (Polyadenylate-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461096 PE=3 SV=1)
HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 560/671 (83.46%), Postives = 606/671 (90.31%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MA V PA A+VQTAAIPP T +VATGGGFLSSSLYVGDLD +V+EGQLLELF QVAQ
Sbjct: 1 MATPVTAPAAVATVQTAAIPP-TDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQT RQSLGYAYVNFS+HQ+A +A++HLNF+P+NGKPIRIM+SNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTGRQSLGYAYVNFSNHQEASSALKHLNFSPINGKPIRIMMSNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
G+AN+FIKNLD SIDNKALHDTFATFG +LSCKVAIDSNGQSKGYGFVQFENE SA +I
Sbjct: 121 GHANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
+RLNGMLLNDKQV+VGHFIR QERI+ANGS FTNVYVKNL ETTT DDLKNLFA HGAIT
Sbjct: 181 VRLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SA+VMTD GKSKCFGFVNFQ+ DSAAAAVE LNG++LGD+K+LYV RAQ+K EREAELK
Sbjct: 241 SAVVMTDLKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQ+GLSKGSG
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSSPDEATRALNE+NGKMKGRKPL+VAVAQ KEERKARLQAQFAQ RA G ISSLPS
Sbjct: 361 FVAFSSPDEATRALNELNGKMKGRKPLFVAVAQHKEERKARLQAQFAQARAAGAISSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGAPR+ PQQ+Y+GQGNPGLVP QPAGYGFQPQLM+GMRPGMGPNF++PYQFQR
Sbjct: 421 GIPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFILPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLE- 540
QGQPGPR GMRRGGNSQP +QQ S LLRG+GQGF YMNN RNGL+
Sbjct: 481 QGQPGPRPGMRRGGNSQPFNKQQQS--------------LLRGTGQGFSYMNNVRNGLKP 540
Query: 541 ---PPILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLG 600
PP+LPQ +VGP+MPL FD+SGVSSSPID+QRSR VP+STLASALASA+PENQRVMLG
Sbjct: 541 PVLPPVLPQAVVGPVMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLG 600
Query: 601 EQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPEL 660
EQLYPLVE LEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVL KA SEPEL
Sbjct: 601 EQLYPLVECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPEL 656
Query: 661 SDQLGALALTK 668
SDQLGALAL K
Sbjct: 661 SDQLGALALAK 656
BLAST of Lsi08G005870 vs. ExPASy TrEMBL
Match:
A0A6J1JI74 (Polyadenylate-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111487196 PE=3 SV=1)
HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 562/671 (83.76%), Postives = 603/671 (89.87%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
M V PAT A+VQTAAIPP T +VATGGGFL+SSLYVGDLD +VNEGQLLELF QVAQ
Sbjct: 1 MKTPVTAPATVATVQTAAIPP-TDSVATGGGFLNSSLYVGDLDPTVNEGQLLELFSQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQTRR+SLGYAYVNFS+HQ+A +A+EHLNFT +NGKPIRIM+SNR+PSIRKS
Sbjct: 61 VVSIRVCRDQTRRRSLGYAYVNFSNHQEASSALEHLNFTLINGKPIRIMMSNRNPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
G AN+FIKNLD SIDNKAL+DTFATFGT+LSCKVAIDSNGQSKGYGFVQFENEE+A +I
Sbjct: 121 GQANVFIKNLDASIDNKALYDTFATFGTILSCKVAIDSNGQSKGYGFVQFENEEAANIAI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
+RLNGMLLNDKQV+VGHFIR QERI+ANGS TNVYVKNL ETTT DDLKNLFA HGAIT
Sbjct: 181 VRLNGMLLNDKQVFVGHFIRRQERIQANGSTVTNVYVKNLLETTTADDLKNLFATHGAIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SA VMTDSN KSKCFGFVNFQ+ DSAAAAVE LNG+VLGDDK+LYV RAQ+KAEREAELK
Sbjct: 241 SAAVMTDSNRKSKCFGFVNFQSPDSAAAAVETLNGTVLGDDKVLYVARAQKKAEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AKF QERKSRFEKLQGANLYIKNLDD IDDEKLKELFSEYGTITSCKVMLDQ+GLSKGSG
Sbjct: 301 AKFVQERKSRFEKLQGANLYIKNLDDQIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSSPDEATRALNE+NGKMKGRKPLYVAVAQ KEERKARLQAQFAQ RA G ISSLPS
Sbjct: 361 FVAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGAPR+ PQQ+Y+GQGNPGLVP QPAGYGFQPQLM+GMRPGMGPNF+MPYQFQR
Sbjct: 421 GIPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLE- 540
QGQPGPR GMRRGGNSQP +QQ S LLRG+GQGF YMNN RNGL+
Sbjct: 481 QGQPGPRPGMRRGGNSQPFNKQQQS--------------LLRGTGQGFSYMNNVRNGLKP 540
Query: 541 ---PPILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLG 600
PP+LPQ LVGP+MPL FD+SGVSSSPIDIQRSR VP+STLASALASA+PENQR+MLG
Sbjct: 541 PVLPPVLPQALVGPVMPLTFDTSGVSSSPIDIQRSRVVPSSTLASALASASPENQRMMLG 600
Query: 601 EQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPEL 660
EQLYPLVE LEPGHAAKVTGMLLEMDQPEVLHLIESPDDL SKVAEAMEVL KA EPEL
Sbjct: 601 EQLYPLVECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLNSKVAEAMEVLHKASFEPEL 656
Query: 661 SDQLGALALTK 668
SDQLGALAL K
Sbjct: 661 SDQLGALALAK 656
BLAST of Lsi08G005870 vs. NCBI nr
Match:
XP_038885325.1 (polyadenylate-binding protein 3 [Benincasa hispida])
HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 626/667 (93.85%), Postives = 641/667 (96.10%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MAATVP PAT+A V TAAIPPSTG+VATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ
Sbjct: 1 MAATVPAPATAALVPTAAIPPSTGSVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
GYAN+FIKNLDTSIDNKALHD FA+FGTVLSCKVA+DSNGQSKGYGFVQFENEESAESSI
Sbjct: 121 GYANVFIKNLDTSIDNKALHDAFASFGTVLSCKVAVDSNGQSKGYGFVQFENEESAESSI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
+RLNGML+NDKQVYVG FIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHG IT
Sbjct: 181 VRLNGMLINDKQVYVGPFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGTIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNG++LGDD+ILYVGRAQRKAEREAELK
Sbjct: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGTILGDDRILYVGRAQRKAEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSSPDEATRAL+EMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQ+RATGGIS LPS
Sbjct: 361 FVAFSSPDEATRALSEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQMRATGGISPLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
GMPGFHPGAPRV+PQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQ+QR
Sbjct: 421 GMPGFHPGAPRVSPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQYQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLEP 540
QGQPGPRSGMRRGGNSQPV QQQ LLLRGSGQGFRYMNNARNGLEP
Sbjct: 481 QGQPGPRSGMRRGGNSQPVQQQQ---------------LLLRGSGQGFRYMNNARNGLEP 540
Query: 541 PILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQLY 600
+LPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQLY
Sbjct: 541 SVLPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQLY 600
Query: 601 PLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSDQL 660
PLVERLEP HAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKA SEPELSDQL
Sbjct: 601 PLVERLEPSHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKASSEPELSDQL 652
Query: 661 GALALTK 668
GALALTK
Sbjct: 661 GALALTK 652
BLAST of Lsi08G005870 vs. NCBI nr
Match:
XP_008456718.1 (PREDICTED: polyadenylate-binding protein 3 [Cucumis melo])
HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 614/667 (92.05%), Postives = 630/667 (94.45%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MAATVP PAT+A+VQTA IPP TG VATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ
Sbjct: 1 MAATVPAPATAATVQTAVIPPPTGAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
GYAN+FIKNLD SIDNKAL DTFA FG VLSCKVA+DSNGQSKGYGFVQFE+EESAE SI
Sbjct: 121 GYANVFIKNLDLSIDNKALRDTFAAFGPVLSCKVAVDSNGQSKGYGFVQFESEESAEISI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
+LNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHG IT
Sbjct: 181 EKLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGTIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNG+VLGDDKILYVGRAQRKAEREAELK
Sbjct: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGTVLGDDKILYVGRAQRKAEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSSPDEAT+ALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS
Sbjct: 361 FVAFSSPDEATKALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGA RV+PQQ+Y+GQGNPGL PPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR
Sbjct: 421 GIPGFHPGA-RVSPQQMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLEP 540
QGQPGPRSGMRRGGNSQP+PQQQ L LRG GQGFRYMNNARNGLE
Sbjct: 481 QGQPGPRSGMRRGGNSQPLPQQQ---------------LPLRGFGQGFRYMNNARNGLES 540
Query: 541 PILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQLY 600
P+LPQGLV PMMPLAFD SGVSS P DIQR+RAVPTSTLASALASATPENQRVMLGEQLY
Sbjct: 541 PVLPQGLVSPMMPLAFDGSGVSSPPNDIQRTRAVPTSTLASALASATPENQRVMLGEQLY 600
Query: 601 PLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSDQL 660
PLVERLEP HAAKVTGMLLEMDQPEVLHLIESP+DLKSKVAEAMEVLRKA SEPELSDQL
Sbjct: 601 PLVERLEPSHAAKVTGMLLEMDQPEVLHLIESPEDLKSKVAEAMEVLRKASSEPELSDQL 651
Query: 661 GALALTK 668
GALALTK
Sbjct: 661 GALALTK 651
BLAST of Lsi08G005870 vs. NCBI nr
Match:
XP_004140947.2 (polyadenylate-binding protein 3 [Cucumis sativus] >KGN46107.2 hypothetical protein Csa_005667 [Cucumis sativus])
HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 606/667 (90.85%), Postives = 623/667 (93.40%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MAATVP PAT+A+VQTA IPP T VATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ
Sbjct: 1 MAATVPAPATAATVQTAVIPPPTVAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
GYAN+FIKNLD SIDNKAL DTFA FGTVLSCKVA+DSNGQSKGYGFVQFE+EESAE SI
Sbjct: 121 GYANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
+LNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFA HG IT
Sbjct: 181 EKLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKL+G+VLGDDK LYVGRAQRKAEREAELK
Sbjct: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSSPDEAT+ALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRA GGISSLPS
Sbjct: 361 FVAFSSPDEATKALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGISSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGA RV+PQQ+Y+GQGNPGL PPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR
Sbjct: 421 GIPGFHPGAARVSPQQMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLEP 540
QGQPGPR G+RRGGNSQP+PQQQ L LRG GQ FRYMNNARNGLE
Sbjct: 481 QGQPGPRLGVRRGGNSQPLPQQQ---------------LPLRGYGQSFRYMNNARNGLET 540
Query: 541 PILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQLY 600
P+LPQGLV PMMPLAFD SGVSS P DIQRSRAVPTSTLASALASA+ ENQRVMLGEQLY
Sbjct: 541 PVLPQGLVSPMMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALASASLENQRVMLGEQLY 600
Query: 601 PLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSDQL 660
PLVERLEP HAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKA SEPELSDQL
Sbjct: 601 PLVERLEPSHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKASSEPELSDQL 652
Query: 661 GALALTK 668
GAL LTK
Sbjct: 661 GALTLTK 652
BLAST of Lsi08G005870 vs. NCBI nr
Match:
XP_022133807.1 (polyadenylate-binding protein 3-like [Momordica charantia])
HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 571/668 (85.48%), Postives = 617/668 (92.37%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MAA V T+A VQ AAIPP G+ ATG GFLSSSLYVGDLDQSVNEGQLLE+FGQVAQ
Sbjct: 1 MAAAVQASVTAAQVQPAAIPPPVGSAATGAGFLSSSLYVGDLDQSVNEGQLLEVFGQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQTRRQSLGYAYVNFS+HQDA NAME LNFTPVNGKPIRIMISNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTRRQSLGYAYVNFSNHQDASNAMELLNFTPVNGKPIRIMISNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
G+AN+FIKNLD SIDNKALHDTFA FGTVLSCKVA+DSNGQSKGYGFVQFE+EE+AES+I
Sbjct: 121 GHANVFIKNLDISIDNKALHDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEEAAESAI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
IRLNGML+NDKQVYVGHFIRHQERIRANGS FTNVYVKNLPETTTDDDLK++FAAHG+IT
Sbjct: 181 IRLNGMLINDKQVYVGHFIRHQERIRANGSMFTNVYVKNLPETTTDDDLKDIFAAHGSIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SA+VM DSNGKS+CFGFVNFQ +D+AA AVEKLNG++LGDDK+LYVGRAQRK+EREAELK
Sbjct: 241 SAVVMRDSNGKSRCFGFVNFQTSDAAAVAVEKLNGTILGDDKVLYVGRAQRKSEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AK+EQER SRFEKLQGANLYIKN+DDH+DDEKLKELFSE+GTITSCKVMLDQHGLSKGSG
Sbjct: 301 AKYEQERLSRFEKLQGANLYIKNIDDHVDDEKLKELFSEFGTITSCKVMLDQHGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSS +EAT+ALNEMNGKM GRKPLYVAVAQRKEERKARLQAQFAQIRA GG+SSLPS
Sbjct: 361 FVAFSSSEEATKALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGMSSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGAPR+ PQQ+Y+GQGN GLVPPQPAGYGFQPQLM+GMRPGM PN+++PYQFQR
Sbjct: 421 GIPGFHPGAPRLAPQQMYYGQGN-GLVPPQPAGYGFQPQLMTGMRPGMAPNYMVPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLEP 540
QGQPG GMRRGGNSQPV QQQ ++LRGSGQGFRYMNNARNGLE
Sbjct: 481 QGQPGRGPGMRRGGNSQPVQQQQ---------------MVLRGSGQGFRYMNNARNGLES 540
Query: 541 PILPQGLVG-PMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQL 600
P+LPQGLVG PMMPLAF+SSGV+SSPIDIQRSR VPTSTLASALASATPENQRVMLGEQL
Sbjct: 541 PVLPQGLVGPPMMPLAFESSGVTSSPIDIQRSRTVPTSTLASALASATPENQRVMLGEQL 600
Query: 601 YPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSDQ 660
YPLV+RLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLK+KVAEAMEVLRKA SEPEL+DQ
Sbjct: 601 YPLVDRLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKNKVAEAMEVLRKATSEPELTDQ 652
Query: 661 LGALALTK 668
L +LAL K
Sbjct: 661 LTSLALNK 652
BLAST of Lsi08G005870 vs. NCBI nr
Match:
KAG7032892.1 (Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 563/671 (83.90%), Postives = 606/671 (90.31%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
MA V PA A+VQTAAIPP T +VATGGGFLSSSLYVGDLD +V+EGQLLELF QVAQ
Sbjct: 1 MATPVTAPAAVATVQTAAIPP-TDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQ 60
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
VVSIRVCRDQT RQSLGYAYVNFS+HQ+A +A+EHLNF+P+NGKPIRIM+SNRDPSIRKS
Sbjct: 61 VVSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKS 120
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
G+AN+FIKNLD SIDNKALHDTFATFG +LSCKVAIDSNGQSKGYGFVQFENE SA +I
Sbjct: 121 GHANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAI 180
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAIT 240
+RLNGMLLNDKQV+VGHFIR QERI+ANGS FTNVYVKNL ETTT DDLKNLFA HGAIT
Sbjct: 181 VRLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAIT 240
Query: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELK 300
SA+VMTDS GKSKCFGFVNFQ+ DSAAAAVE LNG++LGD+K+LYV RAQ+K EREAELK
Sbjct: 241 SAVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELK 300
Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360
AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQ+GLSKGSG
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSG 360
Query: 361 FVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420
FVAFSSPDEATRALNE+NGKMKGRKPLYVAVAQ KEERKARLQAQFAQ RA G ISSLPS
Sbjct: 361 FVAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPS 420
Query: 421 GMPGFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480
G+PGFHPGAPR+ PQQ+Y+GQGNPGLVP QPAGYGFQPQLM+GMRPGMGPNF+MPYQFQR
Sbjct: 421 GIPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQR 480
Query: 481 QGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGLE- 540
QGQPGP GMRRGGNSQP +QQ S LLRG+GQGF YMNN RNGL+
Sbjct: 481 QGQPGPHPGMRRGGNSQPFNKQQQS--------------LLRGTGQGFSYMNNVRNGLKP 540
Query: 541 ---PPILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLG 600
PP+LPQ +VGP+MPL FD+SGVSSSPID+QRSR VP+STLASALASA+PENQRVMLG
Sbjct: 541 PVLPPVLPQAVVGPVMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLG 600
Query: 601 EQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPEL 660
EQLYPLVE LEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVL KA SEPEL
Sbjct: 601 EQLYPLVECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPEL 656
Query: 661 SDQLGALALTK 668
SDQLGALAL K
Sbjct: 661 SDQLGALALAK 656
BLAST of Lsi08G005870 vs. TAIR 10
Match:
AT1G22760.1 (poly(A) binding protein 3 )
HSP 1 Score: 705.7 bits (1820), Expect = 3.6e-203
Identity = 392/661 (59.30%), Postives = 481/661 (72.77%), Query Frame = 0
Query: 1 MAATVPTPATSASVQT-AAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVA 60
M VP+P SVQ +IP + V +SSLY GDLD V E L +LF VA
Sbjct: 14 MVDQVPSPTAQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVA 73
Query: 61 QVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRK 120
VVS+RVCRDQ RR SLGYAY+NFS+ DA AME LN+TP+ +PIRIM+SNRDPS R
Sbjct: 74 NVVSVRVCRDQNRR-SLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRL 133
Query: 121 SGYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESS 180
SG NIFIKNLD SIDNKAL +TF++FGT+LSCKVA+D G+SKGYGFVQFE EESA+++
Sbjct: 134 SGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAA 193
Query: 181 IIRLNGMLLNDKQVYVGHFIRHQERIRANGS---QFTNVYVKNLPETTTDDDLKNLFAAH 240
I +LNGML+NDKQV+VGHFIR QER R + +FTNVYVKNLP+ +D+L+ F
Sbjct: 194 IDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKF 253
Query: 241 GAITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAERE 300
G I+SA+VM D +G S+CFGFVNF+ T++AA+AVEK+NG LGDD +LYVGRAQ+K+ERE
Sbjct: 254 GVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDD-VLYVGRAQKKSERE 313
Query: 301 AELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLS 360
EL+ KFEQER +RFEK QGANLY+KNLDD +DDEKLKE+FSEYG +TS KVML+ G+S
Sbjct: 314 EELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMS 373
Query: 361 KGSGFVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGIS 420
+G GFVA+S+P+EA RAL+EMNGKM GRKPLY+A+AQRKE+R+A LQA F+QIRA
Sbjct: 374 RGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIRA----- 433
Query: 421 SLPSGMPGFH--PGAPRV-TPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMGP-NF 480
P M GFH PG P PQ +Y GQ +VP QP GYGFQPQ M GMRPG GP NF
Sbjct: 434 --PGPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGPGNF 493
Query: 481 LMPYQFQRQGQPGPRSGMRRGGNS--QPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRY 540
++PY QRQ Q GPR G RRG + Q + QQQ L+ R G RY
Sbjct: 494 IVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQ---------------LMHRNPSPGMRY 553
Query: 541 MN---NARNGLEPPILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASAT 600
MN N RNG++ + PQG++ P++PL D+S +S Q++ +P S L S+LASA+
Sbjct: 554 MNGASNGRNGMDSSV-PQGILPPIIPLPIDASSISH-----QKAPLLPISKLTSSLASAS 613
Query: 601 PENQRVMLGEQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVL 649
P ++ MLGEQLYPLVER EP H AKVTGMLLEMDQ E+LHL+ESP+ LKSKV+EA++VL
Sbjct: 614 PADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVL 644
BLAST of Lsi08G005870 vs. TAIR 10
Match:
AT1G71770.1 (poly(A)-binding protein 5 )
HSP 1 Score: 679.9 bits (1753), Expect = 2.1e-195
Identity = 380/675 (56.30%), Postives = 483/675 (71.56%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
+AA P P + S Q AA+ + +SSLYVGDLD SVNE LL+LF QVA
Sbjct: 26 VAAAAPPPFPAVS-QVAAVAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAP 85
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
V ++RVCRD T R SLGYAYVNF++ +DA AME LN+ P+ +PIRIM+SNRDPS R S
Sbjct: 86 VHNLRVCRDLTHR-SLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLS 145
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
G N+FIKNLD SIDNKAL++TF++FGT+LSCKVA+D G+SKGYGFVQFE EE+A+++I
Sbjct: 146 GKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAI 205
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGS---QFTNVYVKNLPETTTDDDLKNLFAAHG 240
+LNGMLLNDKQV+VGHF+R Q+R R+ FTNVYVKNLP+ TDD+LK F +G
Sbjct: 206 DKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYG 265
Query: 241 AITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREA 300
I+SA+VM D +G S+ FGFVNF + ++AA AVEK+NG LG+D +LYVGRAQ+K++RE
Sbjct: 266 DISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGED-VLYVGRAQKKSDREE 325
Query: 301 ELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSK 360
EL+ KFEQER SRFEKLQG+NLY+KNLDD ++DEKLKE+FSEYG +TSCKVM++ GLS+
Sbjct: 326 ELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSR 385
Query: 361 GSGFVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISS 420
G GFVA+S+P+EA A+ EMNGKM GRKPLYVA+AQRKEER+A LQ+ F QIR+ G +S
Sbjct: 386 GFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSP 445
Query: 421 LPSGMPGFH---PGAPRVTPQQ-VYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMG-PNF 480
+PS M GFH PG P P ++ G GLVP QP GYG+Q Q M GMRPG G PNF
Sbjct: 446 VPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGPPNF 505
Query: 481 LMPYQFQRQGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMN 540
+MP+ QRQ QPGPR G RRG N+ QQQF Q +L + + +
Sbjct: 506 MMPFPLQRQTQPGPRVGFRRGANNM---QQQFQQQQ----------MLQQNASRFMGGAG 565
Query: 541 NARNGLEPPILPQGLVGPMMPLAFDSSGVS-SSPIDIQRSRAVPTSTLASALASATPENQ 600
N RNG+E PQG++ PL ++S S ++P + + S LAS LA A+P+
Sbjct: 566 NRRNGMEAS-APQGII----PLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKH 625
Query: 601 RVMLGEQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKAL 660
MLG+ LYPLVE+ EP +AAKVTGMLLEMDQ E+LHL+ESP+ LK+KV+EA++VLR++
Sbjct: 626 PRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSA 679
Query: 661 SEPELSDQLGALALT 667
+S AL+
Sbjct: 686 DPAAVSSVDDQFALS 679
BLAST of Lsi08G005870 vs. TAIR 10
Match:
AT1G71770.2 (poly(A)-binding protein 5 )
HSP 1 Score: 679.9 bits (1753), Expect = 2.1e-195
Identity = 380/675 (56.30%), Postives = 483/675 (71.56%), Query Frame = 0
Query: 1 MAATVPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60
+AA P P + S Q AA+ + +SSLYVGDLD SVNE LL+LF QVA
Sbjct: 26 VAAAAPPPFPAVS-QVAAVAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAP 85
Query: 61 VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120
V ++RVCRD T R SLGYAYVNF++ +DA AME LN+ P+ +PIRIM+SNRDPS R S
Sbjct: 86 VHNLRVCRDLTHR-SLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLS 145
Query: 121 GYANIFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSI 180
G N+FIKNLD SIDNKAL++TF++FGT+LSCKVA+D G+SKGYGFVQFE EE+A+++I
Sbjct: 146 GKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAI 205
Query: 181 IRLNGMLLNDKQVYVGHFIRHQERIRANGS---QFTNVYVKNLPETTTDDDLKNLFAAHG 240
+LNGMLLNDKQV+VGHF+R Q+R R+ FTNVYVKNLP+ TDD+LK F +G
Sbjct: 206 DKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYG 265
Query: 241 AITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREA 300
I+SA+VM D +G S+ FGFVNF + ++AA AVEK+NG LG+D +LYVGRAQ+K++RE
Sbjct: 266 DISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGED-VLYVGRAQKKSDREE 325
Query: 301 ELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSK 360
EL+ KFEQER SRFEKLQG+NLY+KNLDD ++DEKLKE+FSEYG +TSCKVM++ GLS+
Sbjct: 326 ELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSR 385
Query: 361 GSGFVAFSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISS 420
G GFVA+S+P+EA A+ EMNGKM GRKPLYVA+AQRKEER+A LQ+ F QIR+ G +S
Sbjct: 386 GFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSP 445
Query: 421 LPSGMPGFH---PGAPRVTPQQ-VYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMG-PNF 480
+PS M GFH PG P P ++ G GLVP QP GYG+Q Q M GMRPG G PNF
Sbjct: 446 VPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGPPNF 505
Query: 481 LMPYQFQRQGQPGPRSGMRRGGNSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMN 540
+MP+ QRQ QPGPR G RRG N+ QQQF Q +L + + +
Sbjct: 506 MMPFPLQRQTQPGPRVGFRRGANNM---QQQFQQQQ----------MLQQNASRFMGGAG 565
Query: 541 NARNGLEPPILPQGLVGPMMPLAFDSSGVS-SSPIDIQRSRAVPTSTLASALASATPENQ 600
N RNG+E PQG++ PL ++S S ++P + + S LAS LA A+P+
Sbjct: 566 NRRNGMEAS-APQGII----PLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKH 625
Query: 601 RVMLGEQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKAL 660
MLG+ LYPLVE+ EP +AAKVTGMLLEMDQ E+LHL+ESP+ LK+KV+EA++VLR++
Sbjct: 626 PRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSA 679
Query: 661 SEPELSDQLGALALT 667
+S AL+
Sbjct: 686 DPAAVSSVDDQFALS 679
BLAST of Lsi08G005870 vs. TAIR 10
Match:
AT4G34110.1 (poly(A) binding protein 2 )
HSP 1 Score: 636.0 bits (1639), Expect = 3.5e-182
Identity = 366/668 (54.79%), Postives = 464/668 (69.46%), Query Frame = 0
Query: 7 TPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRV 66
TP S + T+A P+T AT F ++SLYVGDLD +V + QL + FGQ+ VV++RV
Sbjct: 10 TPNGSTAAVTSA--PATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRV 69
Query: 67 CRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYANIF 126
CRD R+SLGY YVNF++ QDA A++ LN+ P+ GKPIR+M S+RDPS+R+SG NIF
Sbjct: 70 CRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIF 129
Query: 127 IKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSIIRLNGM 186
IKNLD SID+KALHDTF++FG ++SCKVA+DS+GQSKGYGFVQ+ NEESA+ +I +LNGM
Sbjct: 130 IKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGM 189
Query: 187 LLNDKQVYVGHFIRHQER-IRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGAITSAIVM 246
LLNDKQVYVG F+R QER AN ++FTNVYVKNL E+TTDDDLKN F +G ITSA+VM
Sbjct: 190 LLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVM 249
Query: 247 TDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELKAKFEQ 306
D GKSK FGFVNF+N D AA AVE LNG DDK YVGRAQ+K+ERE EL+ ++EQ
Sbjct: 250 KDGEGKSKGFGFVNFENADDAARAVESLNGHKF-DDKEWYVGRAQKKSERETELRVRYEQ 309
Query: 307 ERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVAFS 366
K +K Q +NLY+KNLD I DEKLKE+FS +GT+TS KVM D +G SKGSGFVAF+
Sbjct: 310 NLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFA 369
Query: 367 SPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPSGMPGF 426
+P+EAT A+++++GKM KPLYVA+AQRKE+R+ RLQAQF+Q+R S+ MP +
Sbjct: 370 TPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVY 429
Query: 427 HPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMG--PNFLMPYQFQRQGQ 486
PG P + QQ+++GQ P ++PPQP GYG+Q QL+ GMRPG G P+F MP +Q +
Sbjct: 430 PPGGPGI-GQQMFYGQAPPAMIPPQP-GYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQR 489
Query: 487 PGPRSGMRRGG-----NSQPVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRYMNNARNGL 546
PG G R GG P+ QQQ GR+ FRY
Sbjct: 490 PG--GGRRPGGIQHSQQQNPMMQQQMHPRGRM-----------------FRY-------- 549
Query: 547 EPPILPQGLVGPMMPLAFDSSGVSSSPIDIQRSRAVPTSTLASALASATPENQRVMLGEQ 606
PQG G SG P D+ + + LAS L++ATPE QR MLGE
Sbjct: 550 -----PQGRGG---------SG-DVPPYDMGNNMPLTIGALASNLSNATPEQQRTMLGEV 609
Query: 607 LYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKALSEPELSD 666
LYPLVE++E AAKVTGMLLEMDQ EVLHL+ESP+ LK+KVAEAM+VLR +++ ++
Sbjct: 610 LYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLR-SVAAGGATE 629
BLAST of Lsi08G005870 vs. TAIR 10
Match:
AT1G49760.1 (poly(A) binding protein 8 )
HSP 1 Score: 602.8 bits (1553), Expect = 3.3e-172
Identity = 353/678 (52.06%), Postives = 451/678 (66.52%), Query Frame = 0
Query: 5 VPTPATSASVQTAAIPPSTGTVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSI 64
V P +A+ AA + A ++SLYVGDLD +V + QL E F Q QVVS+
Sbjct: 15 VAVPGAAAAEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSV 74
Query: 65 RVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYAN 124
RVCRD T R+SLGY YVN+++ QDA A+ LNF +NG+ IR+M S RDPS+RKSG N
Sbjct: 75 RVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGN 134
Query: 125 IFIKNLDTSIDNKALHDTFATFGTVLSCKVAIDSNGQSKGYGFVQFENEESAESSIIRLN 184
IFIKNLD SID+KALH+TF+ FG +LSCKVA+D +GQSKGYGFVQ++ +E+A+ +I +LN
Sbjct: 135 IFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLN 194
Query: 185 GMLLNDKQVYVGHFIRHQERIRANGS-QFTNVYVKNLPETTTDDDLKNLFAAHGAITSAI 244
GMLLNDKQVYVG F+ +R + +FTNVYVKNL E+ +D++L +F G TS +
Sbjct: 195 GMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCV 254
Query: 245 VMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGSVLGDDKILYVGRAQRKAEREAELKAKF 304
+M D GKSK FGFVNF+N+D AA AV+ LNG DDK +VG+AQ+K+ERE ELK KF
Sbjct: 255 IMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTF-DDKEWFVGKAQKKSERETELKQKF 314
Query: 305 EQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVA 364
EQ K +K QG+NLY+KNLD+ + D+KL+E F+ +GTITSCKVM D G+S+GSGFVA
Sbjct: 315 EQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVA 374
Query: 365 FSSPDEATRALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPSGMP 424
FS+P+EATRA+ EMNGKM KPLYVA+AQRKE+RKARLQAQF+Q+R ++ M
Sbjct: 375 FSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQ 434
Query: 425 GFHPGAPRVTPQQVYFGQGNPGLVPPQPAGYGFQPQLMSGMRPGMG--PNFLMP------ 484
+ PG P + QQ+++GQG P ++ PQP G+G+Q QL+ GMRPG PNF MP
Sbjct: 435 MYPPGGPPM-GQQLFYGQGPPAMI-PQP-GFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQ 494
Query: 485 YQFQRQGQPGPRSGMRRGGNSQ-----PVPQQQFSQWGRIIEAFVEICLLLRGSGQGFRY 544
Q Q+Q Q G RRG Q P+ QQQ GR+ +RY
Sbjct: 495 QQQQQQQQQQRPGGGRRGALPQPQQPSPMMQQQMHPRGRM-----------------YRY 554
Query: 545 MNNARNGLEPPILPQGLVGPMMPLAFD-SSGVSSSPIDIQRSRAVPTSTLASALASATPE 604
N + P M+ + +D SSG D S+ VP LA+ LA+A PE
Sbjct: 555 PQRDVNTMPGP------TQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALATRLANAAPE 614
Query: 605 NQRVMLGEQLYPLVERLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRK 664
QR MLGE LYPLVE+LEP AAKVTGMLLEMDQ EVLHL+ESP+ LK+KV EAM+VLR
Sbjct: 615 QQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLRS 665
Query: 665 ALSEPE--LSDQLGALAL 666
+ +DQL +L+L
Sbjct: 675 VAQQQAGGAADQLASLSL 665
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O64380 | 5.1e-202 | 59.30 | Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=... | [more] |
Q05196 | 3.0e-194 | 56.30 | Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=... | [more] |
P42731 | 4.9e-181 | 54.79 | Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=... | [more] |
Q9FXA2 | 4.6e-171 | 52.06 | Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=... | [more] |
O22173 | 9.7e-169 | 51.90 | Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3C568 | 0.0e+00 | 92.05 | Polyadenylate-binding protein OS=Cucumis melo OX=3656 GN=LOC103496577 PE=3 SV=1 | [more] |
A0A6J1BXU1 | 0.0e+00 | 85.48 | Polyadenylate-binding protein OS=Momordica charantia OX=3673 GN=LOC111006278 PE=... | [more] |
A0A0A0KEB0 | 0.0e+00 | 87.11 | Polyadenylate-binding protein OS=Cucumis sativus OX=3659 GN=Csa_6G052760 PE=3 SV... | [more] |
A0A6J1H757 | 0.0e+00 | 83.46 | Polyadenylate-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461096 PE=3... | [more] |
A0A6J1JI74 | 0.0e+00 | 83.76 | Polyadenylate-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111487196 PE=3 S... | [more] |
Match Name | E-value | Identity | Description | |
XP_038885325.1 | 0.0e+00 | 93.85 | polyadenylate-binding protein 3 [Benincasa hispida] | [more] |
XP_008456718.1 | 0.0e+00 | 92.05 | PREDICTED: polyadenylate-binding protein 3 [Cucumis melo] | [more] |
XP_004140947.2 | 0.0e+00 | 90.85 | polyadenylate-binding protein 3 [Cucumis sativus] >KGN46107.2 hypothetical prote... | [more] |
XP_022133807.1 | 0.0e+00 | 85.48 | polyadenylate-binding protein 3-like [Momordica charantia] | [more] |
KAG7032892.1 | 0.0e+00 | 83.90 | Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |