Lsi08G005660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G005660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	NAC domain-containing protein 83-like
Location	chr08: 13897716 .. 13899245 (-)
RNA-Seq Expression	Lsi08G005660
Synteny	Lsi08G005660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGAGTACAGTTTGCATGAGAGTATGATCATACATGGCTATTCAGATTCAAACTACGTGTTGTGTCGAATTAGAAAGAATGAAAGAGCCAAAAGAAAAACAGAGAAAATATGTAATATTCAACCTATCAAGAAGAGGGTTTTGGCACCTAACATTAATGAGATGGAAAAGAATAACAAAAGAGGACCTACAAGAAAAGCAAATAAAAGACAATCTTCGTCTGAGTTGCAGCTAGTAGAGCCAAGAGTGGTGGCACCTAATATGGTCTACAACATGCCTTGTGATCCCACCAACCAAATTACTACTAATTTGTCCTACTCGATGTTAATGACCACTGACCAAGATACTAGTAATGTGCCTTATAAGGCTGAGATAGCCCGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGGCCATCAACCAGAGTACAAATGATGTGCCTTATATGCTTGGAATGTCCACCTACCAAGGTACTAGTAACGTGCCTTACGAAGCTGATCAGATAGCCAATAATCAAAGTACTAGTGGCATATCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACATGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATATCATATGTGCATAACATGACCATCAACCAAAGTACAAGTGATGTCCCTTACATGCTTGGAATGACCACAGACCAGGATACTAGTAATGTGCCTTGTGAGGTTGATCATATAGTCACTAATCAAAATACTAGTGATGACATGTCATACATTCATAACACGACCATCTACCAGAGTACAAGTGGTGCGCCTTGCATGCCTGAAATGACCATCAATCAATTTACTAATGATGTGTCTTACTTGCCTCAAATGTCCACCGACCAAGGTACTAGTGGTGTGTCTCATGATCCTAACATGACCATCAACCAAAGTACGTGTGACGTGCAAAATATGACTATCACCCAGAGTACGAATGGTGTGTCTAACATTCCTGAAATCACCACCAACAGGATGGAACCTACTGCCAACAAGTTGCAATGGATAGATGATATTTTAGATTTTAGTGATACAAAATATGATGATTTGGCGGACTTAAGTTCATTAGATGAGTATTGGGATGAGAGTGGGATAGTTGGTCAAGAGATTAATGTGTGA

mRNA sequence

ATGCATGAGTACAGTTTGCATGAGAGTATGATCATACATGGCTATTCAGATTCAAACTACGTGTTGTGTCGAATTAGAAAGAATGAAAGAGCCAAAAGAAAAACAGAGAAAATATGTAATATTCAACCTATCAAGAAGAGGGTTTTGGCACCTAACATTAATGAGATGGAAAAGAATAACAAAAGAGGACCTACAAGAAAAGCAAATAAAAGACAATCTTCGTCTGAGTTGCAGCTAGTAGAGCCAAGAGTGGTGGCACCTAATATGGTCTACAACATGCCTTGTGATCCCACCAACCAAATTACTACTAATTTGTCCTACTCGATGTTAATGACCACTGACCAAGATACTAGTAATGTGCCTTATAAGGCTGAGATAGCCCGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGGCCATCAACCAGAGTACAAATGATGTGCCTTATATGCTTGGAATGTCCACCTACCAAGGTACTAGTAACGTGCCTTACGAAGCTGATCAGATAGCCAATAATCAAAGTACTAGTGGCATATCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACATGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATATCATATGTGCATAACATGACCATCAACCAAAGTACAAGTGATGTCCCTTACATGCTTGGAATGACCACAGACCAGGATACTAGTAATGTGCCTTGTGAGGTTGATCATATAGTCACTAATCAAAATACTAGTGATGACATGTCATACATTCATAACACGACCATCTACCAGAGTACAAGTGGTGCGCCTTGCATGCCTGAAATGACCATCAATCAATTTACTAATGATGTGTCTTACTTGCCTCAAATGTCCACCGACCAAGGTACTAGTGGTGTGTCTCATGATCCTAACATGACCATCAACCAAAGTACGTGTGACGTGCAAAATATGACTATCACCCAGAGTACGAATGGTGTGTCTAACATTCCTGAAATCACCACCAACAGGATGGAACCTACTGCCAACAAGTTGCAATGGATAGATGATATTTTAGATTTTAGTGATACAAAATATGATGATTTGGCGGACTTAAGTTCATTAGATGAGTATTGGGATGAGAGTGGGATAGTTGGTCAAGAGATTAATGTGTGA

Coding sequence (CDS)

ATGCATGAGTACAGTTTGCATGAGAGTATGATCATACATGGCTATTCAGATTCAAACTACGTGTTGTGTCGAATTAGAAAGAATGAAAGAGCCAAAAGAAAAACAGAGAAAATATGTAATATTCAACCTATCAAGAAGAGGGTTTTGGCACCTAACATTAATGAGATGGAAAAGAATAACAAAAGAGGACCTACAAGAAAAGCAAATAAAAGACAATCTTCGTCTGAGTTGCAGCTAGTAGAGCCAAGAGTGGTGGCACCTAATATGGTCTACAACATGCCTTGTGATCCCACCAACCAAATTACTACTAATTTGTCCTACTCGATGTTAATGACCACTGACCAAGATACTAGTAATGTGCCTTATAAGGCTGAGATAGCCCGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGGCCATCAACCAGAGTACAAATGATGTGCCTTATATGCTTGGAATGTCCACCTACCAAGGTACTAGTAACGTGCCTTACGAAGCTGATCAGATAGCCAATAATCAAAGTACTAGTGGCATATCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACGTGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATGCCATATGTGCATAACATGACCATCAACCAGAGTACAAGTGATGTGCATGAAGGTACTAGTAACATGCCTTATGAGGCTGATCAGAAAGCCAGTAATCAAAGTACTAGTGACATATCATATGTGCATAACATGACCATCAACCAAAGTACAAGTGATGTCCCTTACATGCTTGGAATGACCACAGACCAGGATACTAGTAATGTGCCTTGTGAGGTTGATCATATAGTCACTAATCAAAATACTAGTGATGACATGTCATACATTCATAACACGACCATCTACCAGAGTACAAGTGGTGCGCCTTGCATGCCTGAAATGACCATCAATCAATTTACTAATGATGTGTCTTACTTGCCTCAAATGTCCACCGACCAAGGTACTAGTGGTGTGTCTCATGATCCTAACATGACCATCAACCAAAGTACGTGTGACGTGCAAAATATGACTATCACCCAGAGTACGAATGGTGTGTCTAACATTCCTGAAATCACCACCAACAGGATGGAACCTACTGCCAACAAGTTGCAATGGATAGATGATATTTTAGATTTTAGTGATACAAAATATGATGATTTGGCGGACTTAAGTTCATTAGATGAGTATTGGGATGAGAGTGGGATAGTTGGTCAAGAGATTAATGTGTGA

Protein sequence

MHEYSLHESMIIHGYSDSNYVLCRIRKNERAKRKTEKICNIQPIKKRVLAPNINEMEKNNKRGPTRKANKRQSSSELQLVEPRVVAPNMVYNMPCDPTNQITTNLSYSMLMTTDQDTSNVPYKAEIARNQSTSDMPYVHNMAINQSTNDVPYMLGMSTYQGTSNVPYEADQIANNQSTSGISYVHNMTINQSTSDVHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQSTSDVHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQSTSDVHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQSTSDVHEGTSNMPYEADQKASNQSTSDISYVHNMTINQSTSDVPYMLGMTTDQDTSNVPCEVDHIVTNQNTSDDMSYIHNTTIYQSTSGAPCMPEMTINQFTNDVSYLPQMSTDQGTSGVSHDPNMTINQSTCDVQNMTITQSTNGVSNIPEITTNRMEPTANKLQWIDDILDFSDTKYDDLADLSSLDEYWDESGIVGQEINV

Homology

[Close]

BLAST of Lsi08G005660 vs. ExPASy TrEMBL
Match: A8XTG9 (Protein CBG18512 OS=Caenorhabditis briggsae OX=6238 GN=CBG18512 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-13
Identity = 116/417 (27.82%), Postives = 183/417 (43.88%), Query Frame = 0


Query: 98  TNQITTNLSYSMLMTTDQDTSNVPYKAEIARNQSTSDM-PYVHNMAINQSTNDVPYMLGM 157
           ++++T+  S S   T  Q TS+ P + E   + S+S+M     +  + QST+  P     
Sbjct: 203 SSEMTSEASSS---TVTQSTSSEPCETESTGSSSSSEMTSEASSSTVTQSTSSEPCETES 262

Query: 158 STYQGTSNVPYEADQIANNQSTS---------GISYVHNMTINQSTSDVHEGTSNVPYEA 217
           +    +S +  EA      QSTS         G S    MT   S+S V + TS+ P E 
Sbjct: 263 TGSSSSSEMTSEASSSTVTQSTSSEPCETESTGSSSSSEMTSEASSSTVTQSTSSEPCET 322

Query: 218 DQKASNQSTSDMPYVHNMTINQSTSDVHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQ 277
           +   S+ S+        MT   S+S V + TS+ P E D   S+ S+        MT   
Sbjct: 323 ESTGSSSSS-------EMTSEASSSTVTQSTSSEPCETDSTGSSSSS-------EMTSEA 382

Query: 278 STSDVHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQSTSDVHEGTSNMPYEADQKASN 337
           S+S V + TS+ P+E +   S+ S+        MT   S+S V + TS+ P E +   S+
Sbjct: 383 SSSTVTQSTSSEPFETESTGSSSSS-------EMTSEASSSTVTQSTSSEPCETESTGSS 442

Query: 338 QSTSDISYVHNMTINQSTSDVPY----------------MLGMTTDQDTSNVPCEVDHIV 397
            S+   S   + T+ QSTS  P+                    T  Q TS+ PCE +   
Sbjct: 443 SSSEMTSEASSSTVTQSTSSEPFETESTGSSSSSEMTSEASSSTVTQSTSSEPCETES-- 502

Query: 398 TNQNTSDDM-SYIHNTTIYQSTSGAPCMPEMTINQFTNDVSYLPQMST-DQGTSGVSHDP 457
           T  ++S +M S   ++T+ QSTS  PC  E T +  +++++     ST  Q TS    + 
Sbjct: 503 TGSSSSSEMTSEASSSTVTQSTSSEPCETESTGSSSSSEMTSEASSSTVTQSTSSEPFET 562

Query: 458 NMTINQS----TCDVQNMTITQSTN---------GVSNIPEITTNRMEPTANKLQWI 474
             T + S    T +  + T+TQST+         G S+  E+T+       N +  I
Sbjct: 563 ESTGSSSSSEMTSEASSSTVTQSTSSEPCETESTGSSSSSEMTSEASSSYCNSINII 593

[Close]

BLAST of Lsi08G005660 vs. ExPASy TrEMBL
Match: A0A5A7TC54 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00130 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.1e-09
Identity = 60/150 (40.00%), Postives = 77/150 (51.33%), Query Frame = 0


Query: 1   MHEYSLHESMIIHGYSDSNYVLCRIRKNERAKRKTEKICNIQPIKKRVLAPNINEMEKNN 60
           MHEY LH+S + +   D NYVLCRIRKNERAKRK E     QP KKR+ AP I+     N
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIRELQQPNKKRMTAPKISP----N 202

Query: 61  KRGPTRKANKRQSSSELQLVEPRVVAPNMVYNMPCDPTNQITTNLSYSMLMTTDQDTSNV 120
           KR  T KA +     +LQ +EPR++    +YN    P              TT +D S V
Sbjct: 203 KRLKT-KAKESCLVDQLQPIEPRLMIRETIYNSNIIPDK------------TTCEDISVV 262

Query: 121 PYKAEIARNQSTSDMPYVHNMAINQSTNDV 151
            +   +  NQ   D  Y   MA N  +N++
Sbjct: 263 DHVPNMIANQ---DNVYTPLMATNIESNNL 272

[Close]

BLAST of Lsi08G005660 vs. ExPASy TrEMBL
Match: A0A5D3CL63 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00650 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.1e-09
Identity = 60/150 (40.00%), Postives = 77/150 (51.33%), Query Frame = 0


Query: 1   MHEYSLHESMIIHGYSDSNYVLCRIRKNERAKRKTEKICNIQPIKKRVLAPNINEMEKNN 60
           MHEY LH+S + +   D NYVLCRIRKNERAKRK E     QP KKR+ AP I+     N
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIRELQQPNKKRMTAPKISP----N 202

Query: 61  KRGPTRKANKRQSSSELQLVEPRVVAPNMVYNMPCDPTNQITTNLSYSMLMTTDQDTSNV 120
           KR  T KA +     +LQ +EPR++    +YN    P              TT +D S V
Sbjct: 203 KRLKT-KAKESCLVDQLQPIEPRLMIRETIYNSNIIPDK------------TTCEDISVV 262

Query: 121 PYKAEIARNQSTSDMPYVHNMAINQSTNDV 151
            +   +  NQ   D  Y   MA N  +N++
Sbjct: 263 DHVPNMIANQ---DNVYTPLMATNIESNNL 272

[Close]

BLAST of Lsi08G005660 vs. ExPASy TrEMBL
Match: A0A1S3CPA2 (NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.1e-09
Identity = 60/150 (40.00%), Postives = 77/150 (51.33%), Query Frame = 0


Query: 1   MHEYSLHESMIIHGYSDSNYVLCRIRKNERAKRKTEKICNIQPIKKRVLAPNINEMEKNN 60
           MHEY LH+S + +   D NYVLCRIRKNERAKRK E     QP KKR+ AP I+     N
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIRELQQPNKKRMTAPKISP----N 202

Query: 61  KRGPTRKANKRQSSSELQLVEPRVVAPNMVYNMPCDPTNQITTNLSYSMLMTTDQDTSNV 120
           KR  T KA +     +LQ +EPR++    +YN    P              TT +D S V
Sbjct: 203 KRLKT-KAKESCLVDQLQPIEPRLMIRETIYNSNIIPDK------------TTCEDISVV 262

Query: 121 PYKAEIARNQSTSDMPYVHNMAINQSTNDV 151
            +   +  NQ   D  Y   MA N  +N++
Sbjct: 263 DHVPNMIANQ---DNVYTPLMATNIESNNL 272

[Close]

BLAST of Lsi08G005660 vs. ExPASy TrEMBL
Match: A0A5D3CNQ3 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00810 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-08
Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 1   MHEYSLHESMIIHGYSDSNYVLCRIRKNERAKRKTEKICNIQPIKKRVLAPNINEMEKNN 60
           MHEY LH+S + +   D NYVLCRIRKNERAKRK E     QP KKR+ AP I+     N
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIRELQQPNKKRMTAPKISP----N 202

Query: 61  KRGPTRKANKRQSSSELQLVEPRVVAPNMVYN 93
           KR  T KA +     +LQ +EPR++    +YN
Sbjct: 203 KRLKT-KAKESCLVDQLQPIEPRLMIRETIYN 229

[Close]

BLAST of Lsi08G005660 vs. NCBI nr
Match: XP_038877574.1 (NAC domain-containing protein 96-like [Benincasa hispida])

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-29
Identity = 89/161 (55.28%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 1   MHEYSLHESMIIHGYSDSNYVLCRIRKNERAKRKTEKICNIQPIKKRVLAPNINEMEKNN 60
           MHEYSLHES+I  GYSD  YVLCRIRKNE  KRK   ICNIQP KKRVLAP I++  K N
Sbjct: 140 MHEYSLHESVITCGYSDPKYVLCRIRKNEGPKRKALGICNIQPTKKRVLAPEIHDTRKIN 199

Query: 61  KRGPTRKANKRQSSSELQLVEPRVVAPNMVYNMPCDP---TNQITTNLSYSMLMTTDQDT 120
           +R PTRKANK       QL E  VV PNMV +M CDP   TNQI  ++SY  L TT++  
Sbjct: 200 QRRPTRKANKILLE---QLGEQSVVTPNMVCHMACDPKMTTNQIPHDVSYLALTTTEKGI 259

Query: 121 SNVPYKAEIARNQSTSDMPYVHNMAINQSTNDVPYMLGMST 159
            ++P + E+  NQ TSDMPY  NM      N +P+M  ++T
Sbjct: 260 GDMP-QPEMTINQITSDMPYAQNM------NIMPHMPEITT 290

[Close]

BLAST of Lsi08G005660 vs. NCBI nr
Match: XP_002635447.1 (Hypothetical protein CBG18512 [Caenorhabditis briggsae] >CAP35946.1 Protein CBG18512 [Caenorhabditis briggsae])

HSP 1 Score: 86.7 bits (213), Expect = 6.5e-13
Identity = 116/417 (27.82%), Postives = 183/417 (43.88%), Query Frame = 0


Query: 98  TNQITTNLSYSMLMTTDQDTSNVPYKAEIARNQSTSDM-PYVHNMAINQSTNDVPYMLGM 157
           ++++T+  S S   T  Q TS+ P + E   + S+S+M     +  + QST+  P     
Sbjct: 203 SSEMTSEASSS---TVTQSTSSEPCETESTGSSSSSEMTSEASSSTVTQSTSSEPCETES 262

Query: 158 STYQGTSNVPYEADQIANNQSTS---------GISYVHNMTINQSTSDVHEGTSNVPYEA 217
           +    +S +  EA      QSTS         G S    MT   S+S V + TS+ P E 
Sbjct: 263 TGSSSSSEMTSEASSSTVTQSTSSEPCETESTGSSSSSEMTSEASSSTVTQSTSSEPCET 322

Query: 218 DQKASNQSTSDMPYVHNMTINQSTSDVHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQ 277
           +   S+ S+        MT   S+S V + TS+ P E D   S+ S+        MT   
Sbjct: 323 ESTGSSSSS-------EMTSEASSSTVTQSTSSEPCETDSTGSSSSS-------EMTSEA 382

Query: 278 STSDVHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQSTSDVHEGTSNMPYEADQKASN 337
           S+S V + TS+ P+E +   S+ S+        MT   S+S V + TS+ P E +   S+
Sbjct: 383 SSSTVTQSTSSEPFETESTGSSSSS-------EMTSEASSSTVTQSTSSEPCETESTGSS 442

Query: 338 QSTSDISYVHNMTINQSTSDVPY----------------MLGMTTDQDTSNVPCEVDHIV 397
            S+   S   + T+ QSTS  P+                    T  Q TS+ PCE +   
Sbjct: 443 SSSEMTSEASSSTVTQSTSSEPFETESTGSSSSSEMTSEASSSTVTQSTSSEPCETES-- 502

Query: 398 TNQNTSDDM-SYIHNTTIYQSTSGAPCMPEMTINQFTNDVSYLPQMST-DQGTSGVSHDP 457
           T  ++S +M S   ++T+ QSTS  PC  E T +  +++++     ST  Q TS    + 
Sbjct: 503 TGSSSSSEMTSEASSSTVTQSTSSEPCETESTGSSSSSEMTSEASSSTVTQSTSSEPFET 562

Query: 458 NMTINQS----TCDVQNMTITQSTN---------GVSNIPEITTNRMEPTANKLQWI 474
             T + S    T +  + T+TQST+         G S+  E+T+       N +  I
Sbjct: 563 ESTGSSSSSEMTSEASSSTVTQSTSSEPCETESTGSSSSSEMTSEASSSYCNSINII 593

[Close]

BLAST of Lsi08G005660 vs. NCBI nr
Match: XP_006817859.1 (PREDICTED: flocculation protein FLO11-like, partial [Saccoglossus kowalevskii])

HSP 1 Score: 73.9 bits (180), Expect = 4.4e-09
Identity = 66/245 (26.94%), Postives = 112/245 (45.71%), Query Frame = 0


Query: 174 NNQSTSGISYVHNMTINQSTSDVHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQSTSD 233
           +N +TS    V+N+ +N  TSD    +  V        ++ +TS  P V+N+ +N  TSD
Sbjct: 119 SNNTTSSSPQVNNIVVNTETSDTTSSSPQVNNIVVNTETSDTTSSSPQVNNIVVNTETSD 178

Query: 234 VHEGTSNVPYEADQKASNQSTSDMPYVHNMTINQSTSDVHEGTSNVPYEADQKASNQSTS 293
               +  V        ++ +TS  P V+N+ +N  TSD    +  V        ++ +TS
Sbjct: 179 TTSSSPQVNNIVVNTETSDTTSSSPQVNNIVVNTETSDTTSSSPQVNNIVVNTETSDTTS 238

Query: 294 DMPYVHNMTINQSTSDVHEGTSNMPYEADQKASNQSTSDISYVHNMTINQSTSDVPYMLG 353
             P V+N+ +N  TSD    +  +        ++ +TS    V+N+ +N  TSD      
Sbjct: 239 SSPQVNNIVVNTETSDTTSSSPQVNNIVVNTETSDTTSSSPQVNNIVVNTETSDT----- 298

Query: 354 MTTDQDTSNVPCEVDHIVTNQNTSDDMS-------YIHNTTIYQSTSGAPCMPEMTINQF 412
                 TS+ P +V++IV N  TSD  S        + NT    +TS +P +  + +N  
Sbjct: 299 ------TSSSP-QVNNIVVNTETSDTTSSSPQVNNIVVNTETSDTTSSSPQVNNIVVNTE 351

[Close]

BLAST of Lsi08G005660 vs. NCBI nr
Match: XP_008465646.1 (PREDICTED: NAC domain-containing protein 83-like [Cucumis melo] >KAA0041044.1 NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-08
Identity = 60/150 (40.00%), Postives = 77/150 (51.33%), Query Frame = 0


Query: 1   MHEYSLHESMIIHGYSDSNYVLCRIRKNERAKRKTEKICNIQPIKKRVLAPNINEMEKNN 60
           MHEY LH+S + +   D NYVLCRIRKNERAKRK E     QP KKR+ AP I+     N
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIRELQQPNKKRMTAPKISP----N 202

Query: 61  KRGPTRKANKRQSSSELQLVEPRVVAPNMVYNMPCDPTNQITTNLSYSMLMTTDQDTSNV 120
           KR  T KA +     +LQ +EPR++    +YN    P              TT +D S V
Sbjct: 203 KRLKT-KAKESCLVDQLQPIEPRLMIRETIYNSNIIPDK------------TTCEDISVV 262

Query: 121 PYKAEIARNQSTSDMPYVHNMAINQSTNDV 151
            +   +  NQ   D  Y   MA N  +N++
Sbjct: 263 DHVPNMIANQ---DNVYTPLMATNIESNNL 272

[Close]

BLAST of Lsi08G005660 vs. NCBI nr
Match: TYK12052.1 (NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-08
Identity = 60/150 (40.00%), Postives = 77/150 (51.33%), Query Frame = 0


Query: 1   MHEYSLHESMIIHGYSDSNYVLCRIRKNERAKRKTEKICNIQPIKKRVLAPNINEMEKNN 60
           MHEY LH+S + +   D NYVLCRIRKNERAKRK E     QP KKR+ AP I+     N
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIRELQQPNKKRMTAPKISP----N 202

Query: 61  KRGPTRKANKRQSSSELQLVEPRVVAPNMVYNMPCDPTNQITTNLSYSMLMTTDQDTSNV 120
           KR  T KA +     +LQ +EPR++    +YN    P              TT +D S V
Sbjct: 203 KRLKT-KAKESCLVDQLQPIEPRLMIRETIYNSNIIPDK------------TTCEDISVV 262

Query: 121 PYKAEIARNQSTSDMPYVHNMAINQSTNDV 151
            +   +  NQ   D  Y   MA N  +N++
Sbjct: 263 DHVPNMIANQ---DNVYTPLMATNIESNNL 272

The following BLAST results are available for this feature:

BLAST of Lsi08G005660 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G005660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A8XTG9	3.1e-13	27.82	Protein CBG18512 OS=Caenorhabditis briggsae OX=6238 GN=CBG18512 PE=4 SV=1	[more]
A0A5A7TC54	6.1e-09	40.00	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3CL63	6.1e-09	40.00	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CPA2	6.1e-09	40.00	NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE...	[more]
A0A5D3CNQ3	1.8e-08	50.00	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Lsi08G005660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877574.1	1.7e-29	55.28	NAC domain-containing protein 96-like [Benincasa hispida]	[more]
XP_002635447.1	6.5e-13	27.82	Hypothetical protein CBG18512 [Caenorhabditis briggsae] >CAP35946.1 Protein CBG1...	[more]
XP_006817859.1	4.4e-09	26.94	PREDICTED: flocculation protein FLO11-like, partial [Saccoglossus kowalevskii]	[more]
XP_008465646.1	1.3e-08	40.00	PREDICTED: NAC domain-containing protein 83-like [Cucumis melo] >KAA0041044.1 NA...	[more]
TYK12052.1	1.3e-08	40.00	NAC domain-containing protein 83-like [Cucumis melo var. makuwa]	[more]

BLAST of Lsi08G005660 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G005660.1	Lsi08G005660.1	mRNA