Lsi08G005360 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G005360
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein 2
Locationchr08: 13329603 .. 13335050 (+)
RNA-Seq ExpressionLsi08G005360
SyntenyLsi08G005360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAACCGGGCCATCATTAAGGGAAGGTTATGGTGGAGTTCCTCCCAATGTTTCTTCTAATGTAGGGCGGGCGAAATTTGGGTGGGAGAGTCCTCCTAAAAGGGTACGTACTTTGTCTTGTGATGATGGAAGGAGGATGTTCGTTAAGGGTAGTTTTGGATGGGTCTTGAGAGATCACAATGAGAATATTGTTTGCGTTGGGTGTAAGTCTGTGATTGGCGTCTATGATATTTCAATGCTAGAAATGTAGGTGATGAAGAGGGTTTGCAATTCAGATTTTTCCGGAGAAGATAGCAACTTAATGATTTTTTTTTTTTCTTTGGAAACTACATAATTTACAACTAGTTATAAGGGGGGTTAGAAAACTAAGTCTTGGCATTTTTTTATAAAAAAAAAAAATTAGCCTAAACATTAGGCTTTAAGTAACATATTTATAGTAGTAAAGTAACCTTTATTTATTTATTTATTATTTTTTTTTTAATGAGTTTTAGGATAAAAACCCCATAACTTCCGAAATTGGTAAGTAGATTAGAAAATATAATAGAGTTACTTATGTGGTAATCTAATTTGATGTAAAATTAGATTTTTTTTAAAATTTTTTTAATTTAATTTAATTTTTTGAGAAATTAAAAAATATCAAACTATTTACAAATATAGAAAATTTTTATTGTCTATCGCTTGATTGATAGAATTTTTAGTGATAGACCGTAAAATTTTTTTATATTTATAAATAGTTTGACTCATTTTTTTATATTTGAAAATAATTCTATTTTTTTTTTTTTTGGTTAGACGTGGAATTAGATAATTGATTCTGGCGTAATATCTACGGTGAGGTCTCGCGTATTAGATCCTAATTTGTCTGAGGAGTTTTGTTCTTCAGCTTCGAAACATTTACTCGGAAACAACAGATAGCTCTAAATTAATCGGCAGTTAGGGTTTTAGGAATCTCCAAATTCTTCGTGAAGGTCAATTCATTTGTCTCCGGTTTCCAAGATCCCGATTTCCCTCTGTCTTCTGAACCACTAATTTTGGAAAATTGCAGCATATATGGCGGATGATTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCTCGTACTGAATATGGTAGGCCCGTCTATTTATTATGTTTAATTTGTTGGTACTTGAAGCCTCTTTTCTGAAATTTGGGTTCTTTTCTCGAATTCGGTTGCGCATAATGATTTTGCAGCTAGTTCGGCAGTAAATTTTGATGGGCTTAATTCCGTAACAATATCTGGAAAATTAATGAAAGCATTTTCGTTTTGTTTGGTTTGATTTGTTAAGTTAGTTGTGAATAATCAGTGTTCACAAAGTAATTGAATTCAGGTTTTTGCTGATAAAGTTGTAGTTGAAAATTCTGTATGAAGAATGTGCCGAAAATTCTGTATGAAGAATGTGCCCGAAATCATCTCTTCCCCAGCTTCTTGGTGGGTGTTATGTAGATCTTCGAAGTGTGTCTTTCACGGGGTACTAAAATAGTTTGATGGTCCAACGCACTTCATCGATAGATGAGACAAGACAATTTTCCTTTTTTTTGGTTCTGGTGGGGGATGTGCAAGCCAAGTTCTTAAAAAAGTAGTAGGTAGGGTAGGACTAAGAGGTCATGGGTTCAATCCATATTGGTCACCTATCTAGGATTTAATATCCTATGGTTTCTTTGACACCAAAATGTTGTAGGATCAAACGAGTTTAGTGTTTTAAAAAGCCCTCTCGGGCGCGTGCCTAGGCTCAAGGCGCAGATCTGGTGCCTCAGGTGCGTGCCTTTTGTGAAGCCCCAAGGCTCAAAGCCCTGGGACTTGGGGCTTTTTTATTATTTTTAAAAAATAGTAATAATTAAGGGTTTTCCTTTATTAACTAAAAAAATCAAGTTTACTTAAGCCTAAATGCAAAATTTCTTGTGTTTGGGGTCTTTTTTTTTTTTTTTTTTTCCATATTTCCACTTCAACTATGCTTTCTCTTTTTAATGTAATATTTTATATATAATGCGCCTCACAAAAAAAAAGCCGCGCCTTTTTGTGCGTCTTGCGCCTAGGCTCTAGAGGGCCATTGTGCCTTGGGCGTTTAAAAATACTAGGCGGGTTATCTCGTGAGATTAGTTGAGGTGTGCGTAAGCTGGTCTGGACACTCACAGATGTAAAAAGAGAAAAAAAGTAGTATAAAGGGTGTCATTAAAAGTTTTAATGTCCTCATGAACTGAAACTTGGGATAATGCCCTTGTTTTCACCTATAGTCAGTTTTGAAATTTTACTTCATATTTTTGAACCTTGTTGAAAATCCTTAGGGGATGAAAATAAACTTTATAAACCATTCATACAACTTTCACGATCTCAAGGAAGAAACCATGACAATGAATCTTAATGTGCCTGGGGTAGCTTGTCTTTGTCCTATATCTGTATGGTATGCCTATGCCATCATGGGAAAGTCCAAACTCTTCAACGTTTTGGTCCTTAGTAGTGGAGAAAATTCATATCACGCTGTTCACTAAATGGAAGGTTGCTCTATGTTGACATTCTGACAAAGAGAGTCATTATTTGCTTGACTTCCTATAATGTGAGAGAAGGCTTTCCAATCATCTCTCCAGTTTTGGAGGTGTTGAAGCGGCAGGGGGGGGGGGGTTAGTATTCAGTGGCTTTGGCCTAGCAAAGCGTCTGATCCCCTATATCAATTCATTGGTGGTACGCATTTTCGAGTGCAAGCCAAAATTCTTCAGTTATTTATTTTAACTGGCTCGCTTTTATGCTTCCTGCCTAATTGAGTCTTTTATTATTGTGTTTAGACTTTTATTGTTTTTATTGTCTTTTGTTACTTTTGTTTCCTTTACTTCTCTAATCTCTCCCTTGTTTTGTTCTATTGAGCATTAGTCTCTTTTCATTTCATCAACAAAAAGTTTTTTCCTTTGTTAAAAAAAAAAAGGTCCACCTTGCTAAATGGTCTTGGATTTCTGCTCATGGGAGCTCCCGTGAAGGTAGCTAAAGAAATTATCATCAGCAATCAATTATGCTAAGGAAAGTATACTAGAAGAAAATGAGGGGTTGGAGGTTGGGGGAATAGTGTAATGCTAATGTTATAAATGATAGGGAAGGACTATCCAAATACGGTGCGCTCATACAAGAATCTAAATCGAGGGTGGATACAAATGTAATAGAAACACTTCAGAGCTTGAGGGAGATTTGATGGACTGGGAAGTTGAATATTGGAGTGCTTTTGAGGGGCAGATTGCTTTATAGTATGAATGGAAGTAACGGATATGGAGAGGAAGAAACTCTGGAATAAAGTGGGAAATTTATTTGCTGCTATGATGGAAAGTGGTGTCTTGGGAGAGACTTTAATGTAGTGAGAATAGTAAAGAATCTTCAGCCAGAGCAGCAATTAAAAGCATGATGAATTTGGATAAGTTAGTTGATGAGATCAGAATGATCAAAATAGAATAATGTGCCTGGTTGAGTTTTAGAGATGTTCTTGTGCAGTCCCTTGTGGATTAGTTTTGTGTCTCCTAGGAATGCTTAACATAGTTTCATCCTATCAATGAAAGATTTGTGTTCTATTAAAAGAAAGGAACGGTTAACAAAATTTCAAGAGTTGAAGTCAATAAAGAAGGCGAGATCAAGGTTTTGATCCCTTTTAAATGTGTAGGGAACAGGGGAGCGTGATGGGACCATGGCCTTTTAGATTGGAGAACCTTGGGTGAAACATCAAGAGTTTTGGAGGAGATAGTGAGTTAACTGTGGAAATTGGGAAAATGATATTAGTAGCTGCACTTTGAAAGGGATTATAAACAAATGGGAATTGGATACATTTAAAAAATTTGGTAGCGGAGGGAGTTGAAAATCTAATCAGCAACATATATAAAGAAGGGAGAATGTTTAAAAAATTTGGTAACGGAAGGAGTTGAAAATCTAATCAGCAGCATAAAAGGGAGAATGGGTGCTTGGAGTGGAGAGCTAGAGAGACAAAAATCAATGCAATGGCAATTGCGTGGCATCATTCTCAAAAAGGTTTCTAGTTGCTTCCAAAAATTTAAATGGTTAAAAGAAGACGATGTTAGACTTTTGGTATATATATTTATACAATAATAATGTTTGTAGCGAAAGATTTGTCTTGTTTTTTTTTTTTGTTTTTTTGAATTACATTTGGTTGTTCTTACAATAAACTTTAGGTAAATATATTGGGTATAATTAATATTTTCATATATTGGGTAAATTAAGATTTTCATATTATGTATTCATATTGTGATCCCCTACCTTAATAATGTTTAGATACTTCCATGTGATCCACATTCGTTAACATATTATTGTTGGACATCTTACAATAATCTTGAAGTCTTTTTGAAGAATTTCACTTGGTTTCATAAACTAGAAGCTGAGGTTTTTTTGGGATTGAAACAAAATTTTCACTTTATTTACCTACGGTTCTGTTTAAGACTTTGATTTTCTATTTAATTTTGCTCTTATAGATGTTATCCGTCCATTGAACTTAAAGTAGTGTTATATAGTATTTGGATAGGGAGGATGAAGAGATTAGATACGTGGAATATGAAAGTATGAATGAACTGCTAAAACAATTAATTTAAATGGTATGAACTGCTAAAACAATTAATTTAAATGGTACGATAGGACTTTCTATACTCATTGAACTTTGTTGATTTAATTGAGTATTATTGAAGTAGTGTGTGTATTTTACTTTTAACAACTCTTTTATTCCTTCGCTAATAGGGCATCTGTTCTTTCATGTGTGGAATAAACTCTTTTTTTCTTTTTTTTTTTTCCTTCTTCTTTTGGTCTTGTTAGCTGTTTTCCTTATTGTAAATTGGAAATGGAATCATGTCCTGCTTTCACTCTCTGCAGAACATCCATCCTCTGGATTGTCTACCGGCCATGAGATGCACAATTATTTAGCAAGTGATGATTGTGGTGGTCCTCGGTCTGTAAAAGATACACAAACAATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGGTATGACTGAGATCTAGATTTATTCTCTTTTCTTACCTCGCAGTTTGAGTGCTGAAAACATTTTGTAATTGCTTCTGAAGCAACTTTCTTCTTTTCCTTCCGGAGAAGTACCCACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGACCTTTATTACCTGATCCTATTGTAATGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTAGAAATATTGAGTATGGTAATCATCTTCCTGTAGATTCGATGAGCAGACCTGGACGTGAAACTGTGCCTCTTCCTCCTGATGCCTCCAACACTTTATATGTCGAAGGACTTCCTCCAGATAGTTCCCGGAGGGAAGTAGCTCGTATCCTTTTTATAGGTGGTGATGCCACAAGATAA

mRNA sequence

ATGAGAACCGGGCCATCATTAAGGGAAGGTTATGGTGGAGTTCCTCCCAATGTTTCTTCTAATGTAGGGCGGGCGAAATTTGGGTGGGAGAGTCCTCCTAAAAGGGTACGTACTTTGTCTTGTGATGATGGAAGGAGGATGTTCGTTAAGGGTAGTTTTGGATGGGTCTTGAGAGATCACAATGAGAATATTGTTTGCGTTGGGTCATATATGGCGGATGATTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCTCGTACTGAATATGAACATCCATCCTCTGGATTGTCTACCGGCCATGAGATGCACAATTATTTAGCAAGTGATGATTGTGGTGGTCCTCGGTCTGTAAAAGATACACAAACAATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTCCTTCCGGAGAAGTACCCACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGACCTTTATTACCTGATCCTATTGTAATGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTAGAAATATTGAGTATGGTAATCATCTTCCTGTAGATTCGATGAGCAGACCTGGACGTGAAACTGTGCCTCTTCCTCCTGATGCCTCCAACACTTTATATGTCGAAGGACTTCCTCCAGATAGTTCCCGGAGGGAAGTAGCTCGTATCCTTTTTATAGGTGGTGATGCCACAAGATAA

Coding sequence (CDS)

ATGAGAACCGGGCCATCATTAAGGGAAGGTTATGGTGGAGTTCCTCCCAATGTTTCTTCTAATGTAGGGCGGGCGAAATTTGGGTGGGAGAGTCCTCCTAAAAGGGTACGTACTTTGTCTTGTGATGATGGAAGGAGGATGTTCGTTAAGGGTAGTTTTGGATGGGTCTTGAGAGATCACAATGAGAATATTGTTTGCGTTGGGTCATATATGGCGGATGATTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCTCGTACTGAATATGAACATCCATCCTCTGGATTGTCTACCGGCCATGAGATGCACAATTATTTAGCAAGTGATGATTGTGGTGGTCCTCGGTCTGTAAAAGATACACAAACAATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTCCTTCCGGAGAAGTACCCACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGACCTTTATTACCTGATCCTATTGTAATGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTAGAAATATTGAGTATGGTAATCATCTTCCTGTAGATTCGATGAGCAGACCTGGACGTGAAACTGTGCCTCTTCCTCCTGATGCCTCCAACACTTTATATGTCGAAGGACTTCCTCCAGATAGTTCCCGGAGGGAAGTAGCTCGTATCCTTTTTATAGGTGGTGATGCCACAAGATAA

Protein sequence

MRTGPSLREGYGGVPPNVSSNVGRAKFGWESPPKRVRTLSCDDGRRMFVKGSFGWVLRDHNENIVCVGSYMADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFIGGDATR
Homology
BLAST of Lsi08G005360 vs. ExPASy Swiss-Prot
Match: G7ID19 (RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.3e-44
Identity = 97/186 (52.15%), Postives = 127/186 (68.28%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSP-GMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQT 130
           MAD +WNRQQ  LP P GMLKRPRTEY+   SG+++G+E+HNY+A ++  G + + DT+ 
Sbjct: 1   MADGFWNRQQQHLPPPGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNN--GHQMLNDTKI 60

Query: 131 IGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPA 190
           +GSAYDR+LQS  L+SF SGE    G +G  R V         +PG  L DP  M     
Sbjct: 61  LGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-------GELPGHSLGDPSAMGHLSG 120

Query: 191 V--SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARI 250
           V   PDL+ NGR++ +G  LP+D++SRPG ET+PLP DAS+TLYVEGLP DS++REVA I
Sbjct: 121 VGGGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHI 177

Query: 251 L--FIG 252
              F+G
Sbjct: 181 FRPFVG 177

BLAST of Lsi08G005360 vs. ExPASy Swiss-Prot
Match: Q8H0P8 (RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.3e-41
Identity = 97/184 (52.72%), Postives = 116/184 (63.04%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MAD YWNRQQ LLP  G+ KRPR +YE P+SGL +G+EMH     +D  G   VKD++TI
Sbjct: 1   MADGYWNRQQSLLPHSGLHKRPRPDYEMPASGLPSGNEMHYLSREEDRSGHPMVKDSKTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVM-SRPPA 190
           GSAYDRYLQ  Q+ SF SGE  T G +G+ R +         +P   L DP  M  R   
Sbjct: 61  GSAYDRYLQG-QVPSFTSGEASTVGALGLQRGIGG-------LPNHSLSDPSAMIGRHGG 120

Query: 191 VSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL- 250
             PDLAPNGR + YG   P+D +SR G E   LPPDAS TLY+EGLP D +RREVA I  
Sbjct: 121 GGPDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFR 176

Query: 251 -FIG 252
            F+G
Sbjct: 181 PFVG 176

BLAST of Lsi08G005360 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27
Identity = 84/199 (42.21%), Postives = 113/199 (56.78%), Query Frame = 0

Query: 60  HNENIVCVGSY----MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLAS 119
           H+  I+  G Y    ++ D+++   P  P  G      T Y  PS       +MH+YL+ 
Sbjct: 171 HHAGILSPGPYSLPSVSPDFFSTIGPTDPQEG------TPYLIPSG------DMHSYLSQ 230

Query: 120 D-DCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMP 179
           D D G P SVKDT++IGSAYDRYLQS+Q    PS E      +GM R   + M     MP
Sbjct: 231 DEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNM-----MP 290

Query: 180 GPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEG 239
           GP + + ++     ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEG
Sbjct: 291 GPSMGE-LMAGCGGSLPSDFRPNGRDMGFGQ---LDSVGRPGREPHPLPPDVSNTLYVEG 348

Query: 240 LPPDSSRREVARIL--FIG 252
           LP + SRREV+ I   F+G
Sbjct: 351 LPSNCSRREVSHIFRPFVG 348

BLAST of Lsi08G005360 vs. ExPASy Swiss-Prot
Match: A1A6K6 (Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-22
Identity = 81/184 (44.02%), Postives = 98/184 (53.26%), Query Frame = 0

Query: 71  MADDYWNRQ-QPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQT 130
           MAD YWN+Q Q   P  G +KRPR+++E PSS ++ GH    Y   +D      V DT+T
Sbjct: 1   MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDL----DVPDTRT 60

Query: 131 IGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPA 190
           IGSAYDRYLQSVQ     SGE    G + MGR        G  +      D  ++ R   
Sbjct: 61  IGSAYDRYLQSVQ-----SGE---GGSVSMGRSGGGGGGGGGNVQ---TIDDFMLRRGGV 120

Query: 191 VSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL- 250
           +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + SRREVA I  
Sbjct: 121 LPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNCSRREVAHIFR 161

Query: 251 -FIG 252
            F+G
Sbjct: 181 PFVG 161

BLAST of Lsi08G005360 vs. ExPASy Swiss-Prot
Match: Q6JB11 (Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.6e-05
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0

Query: 212 MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG 252
           M   GR   PLPPDAS+TLY+EGLP + +RREV+ I   F+G
Sbjct: 22  MGYGGRPEPPLPPDASSTLYIEGLPANCTRREVSHIFRPFVG 63

BLAST of Lsi08G005360 vs. ExPASy TrEMBL
Match: A0A1S3B4F0 (RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103485638 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.3e-92
Identity = 170/183 (92.90%), Postives = 175/183 (95.63%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSP MLKRPRT+YE P+SGLSTGH+MHNYLASDD GGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG+RMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL-- 250
           SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA I   
Sbjct: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 251 FIG 252
           F+G
Sbjct: 181 FVG 183

BLAST of Lsi08G005360 vs. ExPASy TrEMBL
Match: A0A6J1CKA2 (RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011769 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.5e-88
Identity = 162/183 (88.52%), Postives = 170/183 (92.90%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSPGMLKRPR +YE PSSGL TGHEMHNYL SDD GGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVGSRMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL-- 250
           SPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVA I   
Sbjct: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 251 FIG 252
           F+G
Sbjct: 181 FVG 183

BLAST of Lsi08G005360 vs. ExPASy TrEMBL
Match: A0A6J1JXN9 (RNA-binding protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489771 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.9e-85
Identity = 158/183 (86.34%), Postives = 168/183 (91.80%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSPGMLKRPRTEYE PSSGL   HEMHNY+A+DD GGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRTEYEPPSSGLPAVHEMHNYIANDDHGGPRAVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSSF SGEVPTHGEMGMGRP+ANRMP+G+RMPGPLLPDP+VMSRP AV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPLANRMPIGNRMPGPLLPDPVVMSRPLAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL-- 250
           SPDLA NGRNIEYGNHLPVDS +RP RETVPLPPDA+NTLYVEGLP DSSRREVA I   
Sbjct: 121 SPDLALNGRNIEYGNHLPVDSTNRPIRETVPLPPDATNTLYVEGLPSDSSRREVAHIFRP 180

Query: 251 FIG 252
           F+G
Sbjct: 181 FVG 183

BLAST of Lsi08G005360 vs. ExPASy TrEMBL
Match: A0A6J1E3U2 (RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430572 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.5e-83
Identity = 154/183 (84.15%), Postives = 164/183 (89.62%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSPGMLKRPR EYE PSSG   GH+MHN+LASDD  GP +VKDTQ I
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRAEYELPSSGFPPGHDMHNHLASDDRSGPPAVKDTQAI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSS  SGEVPT GEMGMGRP+ANR+PVGSRMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSAASGEVPTLGEMGMGRPIANRIPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL-- 250
           SPDL PNGRNIEYGNHLPV+SM+RPGRETVPLPPDASNTLYVEGLP DSSRREVA I   
Sbjct: 121 SPDLTPNGRNIEYGNHLPVESMNRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 251 FIG 252
           F+G
Sbjct: 181 FVG 183

BLAST of Lsi08G005360 vs. ExPASy TrEMBL
Match: A0A6J1FDW9 (RNA-binding protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444852 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 9.4e-83
Identity = 155/183 (84.70%), Postives = 165/183 (90.16%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSPGMLKRPRTEYE PSSGL   HEMHNY+A+DD GGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRTEYEPPSSGLPAVHEMHNYIANDDHGGPRAVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQ SSF SGEVPTHGEMGMGRP+ANRMP+ +RMPGPLLPDP+VMSRP AV
Sbjct: 61  GSAYDRYLQSVQPSSFTSGEVPTHGEMGMGRPLANRMPIANRMPGPLLPDPVVMSRPLAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL-- 250
           SPDLA NGRNIEY NHLPVDS +RP RETVPLPPDA+NTLYVEGLP DSSRREVA I   
Sbjct: 121 SPDLALNGRNIEYSNHLPVDSTNRPIRETVPLPPDATNTLYVEGLPSDSSRREVAHIFRP 180

Query: 251 FIG 252
           F+G
Sbjct: 181 FVG 183

BLAST of Lsi08G005360 vs. NCBI nr
Match: XP_038884975.1 (RNA-binding protein 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.9e-93
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSPG+LKRPRTEYE PSSGL +GHEMHNYLASDD GG RSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGILKRPRTEYELPSSGLPSGHEMHNYLASDDRGGLRSVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 250
           SPD+APNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
Sbjct: 121 SPDIAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180

BLAST of Lsi08G005360 vs. NCBI nr
Match: XP_038884977.1 (RNA-binding protein 2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.9e-93
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSPG+LKRPRTEYE PSSGL +GHEMHNYLASDD GG RSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGILKRPRTEYELPSSGLPSGHEMHNYLASDDRGGLRSVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 250
           SPD+APNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
Sbjct: 121 SPDIAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180

BLAST of Lsi08G005360 vs. NCBI nr
Match: XP_038884978.1 (RNA-binding protein 2-like isoform X4 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.9e-93
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSPG+LKRPRTEYE PSSGL +GHEMHNYLASDD GG RSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGILKRPRTEYELPSSGLPSGHEMHNYLASDDRGGLRSVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 250
           SPD+APNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
Sbjct: 121 SPDIAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180

BLAST of Lsi08G005360 vs. NCBI nr
Match: XP_008441534.1 (PREDICTED: RNA-binding protein 2 [Cucumis melo] >XP_008441535.1 PREDICTED: RNA-binding protein 2 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 2.7e-92
Identity = 170/183 (92.90%), Postives = 175/183 (95.63%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSP MLKRPRT+YE P+SGLSTGH+MHNYLASDD GGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG+RMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL-- 250
           SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA I   
Sbjct: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 251 FIG 252
           F+G
Sbjct: 181 FVG 183

BLAST of Lsi08G005360 vs. NCBI nr
Match: XP_031743537.1 (RNA-binding protein 2 isoform X3 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 1.3e-91
Identity = 168/183 (91.80%), Postives = 174/183 (95.08%), Query Frame = 0

Query: 71  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTI 130
           MADDYWNRQQPLLPSP MLKRPRT+YE P+SGLSTGH+MHNYL SDD GGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGPRSVKDTQTI 60

Query: 131 GSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAV 190
           GSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG+RMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 191 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL-- 250
           SPDLAPNGRN+EYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA I   
Sbjct: 121 SPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 251 FIG 252
           F+G
Sbjct: 181 FVG 183

BLAST of Lsi08G005360 vs. TAIR 10
Match: AT1G21320.2 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-33
Identity = 87/190 (45.79%), Postives = 121/190 (63.68%), Query Frame = 0

Query: 71  MADDYWNRQQ----PLLPSPGML--KRPRTEYEHPSSGLSTGHEMHNYLASD-DCGGPRS 130
           MAD+YWN+Q+    P+  +P +L  KRPR++++     + +G +MH+YL+ D D G P S
Sbjct: 1   MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSG-DMHSYLSQDEDRGIPHS 60

Query: 131 VKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIV 190
           VKDT++IGSAYDRYLQS+Q    PS E      +GM R   + M     MPGP + + ++
Sbjct: 61  VKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNM-----MPGPSMGE-LM 120

Query: 191 MSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRRE 250
                ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLP + SRRE
Sbjct: 121 AGCGGSLPSDFRPNGRDMGFGQ---LDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRRE 180

Query: 251 VARIL--FIG 252
           V+ I   F+G
Sbjct: 181 VSHIFRPFVG 180

BLAST of Lsi08G005360 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 84/199 (42.21%), Postives = 113/199 (56.78%), Query Frame = 0

Query: 60  HNENIVCVGSY----MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLAS 119
           H+  I+  G Y    ++ D+++   P  P  G      T Y  PS       +MH+YL+ 
Sbjct: 171 HHAGILSPGPYSLPSVSPDFFSTIGPTDPQEG------TPYLIPSG------DMHSYLSQ 230

Query: 120 D-DCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMP 179
           D D G P SVKDT++IGSAYDRYLQS+Q    PS E      +GM R   + M     MP
Sbjct: 231 DEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNM-----MP 290

Query: 180 GPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEG 239
           GP + + ++     ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEG
Sbjct: 291 GPSMGE-LMAGCGGSLPSDFRPNGRDMGFGQ---LDSVGRPGREPHPLPPDVSNTLYVEG 348

Query: 240 LPPDSSRREVARIL--FIG 252
           LP + SRREV+ I   F+G
Sbjct: 351 LPSNCSRREVSHIFRPFVG 348

BLAST of Lsi08G005360 vs. TAIR 10
Match: AT1G76940.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-23
Identity = 81/184 (44.02%), Postives = 98/184 (53.26%), Query Frame = 0

Query: 71  MADDYWNRQ-QPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQT 130
           MAD YWN+Q Q   P  G +KRPR+++E PSS ++ GH    Y   +D      V DT+T
Sbjct: 1   MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDL----DVPDTRT 60

Query: 131 IGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPA 190
           IGSAYDRYLQSVQ     SGE    G + MGR        G  +      D  ++ R   
Sbjct: 61  IGSAYDRYLQSVQ-----SGE---GGSVSMGRSGGGGGGGGGNVQ---TIDDFMLRRGGV 120

Query: 191 VSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL- 250
           +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + SRREVA I  
Sbjct: 121 LPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNCSRREVAHIFR 161

Query: 251 -FIG 252
            F+G
Sbjct: 181 PFVG 161

BLAST of Lsi08G005360 vs. TAIR 10
Match: AT1G76940.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-06
Identity = 34/74 (45.95%), Postives = 40/74 (54.05%), Query Frame = 0

Query: 180 DPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDS 239
           D  ++ R   +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + 
Sbjct: 42  DDFMLRRGGVLPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNC 101

Query: 240 SRREVARIL--FIG 252
           SRREVA I   F+G
Sbjct: 102 SRREVAHIFRPFVG 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
G7ID196.3e-4452.15RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1[more]
Q8H0P82.3e-4152.72RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1[more]
F4HWF91.4e-2742.21Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE... [more]
A1A6K62.3e-2244.02Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE... [more]
Q6JB117.6e-0557.14Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3B4F01.3e-9292.90RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103485638 PE=4 SV=1[more]
A0A6J1CKA21.5e-8888.52RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011769 PE=4 S... [more]
A0A6J1JXN95.9e-8586.34RNA-binding protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148977... [more]
A0A6J1E3U25.5e-8384.15RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430572 PE=4 SV... [more]
A0A6J1FDW99.4e-8384.70RNA-binding protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444... [more]
Match NameE-valueIdentityDescription
XP_038884975.11.9e-9395.56RNA-binding protein 2-like isoform X1 [Benincasa hispida][more]
XP_038884977.11.9e-9395.56RNA-binding protein 2-like isoform X3 [Benincasa hispida][more]
XP_038884978.11.9e-9395.56RNA-binding protein 2-like isoform X4 [Benincasa hispida][more]
XP_008441534.12.7e-9292.90PREDICTED: RNA-binding protein 2 [Cucumis melo] >XP_008441535.1 PREDICTED: RNA-b... [more]
XP_031743537.11.3e-9191.80RNA-binding protein 2 isoform X3 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT1G21320.21.4e-3345.79nucleotide binding;nucleic acid binding [more]
AT1G21320.11.0e-2842.21nucleotide binding;nucleic acid binding [more]
AT1G76940.11.7e-2344.02RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G76940.21.8e-0645.95RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR10501U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Bcoord: 77..248
NoneNo IPR availablePANTHERPTHR10501:SF53NUCLEAR SPECKLE RNA-BINDING PROTEIN A-RELATEDcoord: 77..248

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G005360.1Lsi08G005360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding