Lsi08G005230 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G005230
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DUF150 domain-containing protein
Location	chr08: 13180314 .. 13183390 (-)
RNA-Seq Expression	Lsi08G005230
Synteny	Lsi08G005230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATAGCAACACTGTGTTGTGACTCGTGAGCTTCATCATCCCCAACACTCTGTTCGGACGGTTTTGTTTCTTCTAACGCACATTAACGGATTTCAAGTCCCAAGAGCAGGAATGTTCTTGATTACGGCTCGTAATTTCAGACTCTCTGCGGTTTCCACTTCAATAATCCTTCCACGGAGTGGCTTCCGATGGTCTTCAATCTCCCCCAGAAATCTTCCCTTCCCATTTGTCGAGCATCGATTTTCTTCTACGTCGAACAATCCCCTATTACTTCATGCCAGAAAGAGAGACTCAGAATCAGAGCCAGTTCTCAAACGAAACATCGTCGAGGAAGTGTCGCAGGACGAAGAAGATGACGTCCTTCTCGACGAACTTGAAGAAGGTAAAACCCATTTACAAAAACTCTCTCTCATTTTGTCCCTTTAATTTCAACTAAATGCTAGTGTAGACTGGTCTTGGAAAAGTAAATTGACGGGACACGTTCTTGATTGCATAGATGAGATAATGGAAGATGATGGCGAAGATTACTTTGAAGAAGAGTATATGGAGGATAATGCTGAAGTTTATGTAAGATTTTCGCGTCTAAATAAAAAACTTCAACTCAAGTCCTGGGTTAGTGGTTTGATGGTTAATTTTGTTTGAAGGAAGGGGATGGCGGGGAAGGAGGTGGAATTTCCCTTGCTGGGACATGGTGGGATAAAGAAGCACTGGCCATAGCTGAGGAGGTTATTCTTTCATTTCACGGTGAATTGAAGATTTATGCTTTCAAAACAGTCTCGAATTCCACTGTTCGAGTGCGGATTGAAAAGCTTTCTAACAAGTAAGTTTTGCAATCTCTGTAATTATGTTATGTGTGTGTTTCTTTGTATCTTATAAAAAGTTAAATAGAAATGCATTGCAAATTTTCTAAAACATATTAGAATGAGGTTTGGTTTTGTTGCAATATGATAACTTCCCTATTGCTGCATTCATAAGAATGAAATGCCGTCTCCCTGCTTTCCTCTCAAAGGATTGTTTGAGTGATGTTTGATATTAGGAAATATTAGGATTACTAGCCCTAAATTTTACTCGCAAATTAAGGAAGATAGTTCATACTAGGATAAAAGATTTAAGACTTGTTTGGAATGATTGCCTAAGTGCTTAAAAACATTTTTTCTATACTTCAAAACACTTCCTTAATATTTTGAAAGTCATTCCAAACAAGCCCTTATAATACTAGTTCACCCACTTCCAATGAGTTAGATCCAATCTTCTACTCATGTTTAAGTGCAAATTGAAAAGCTCATATTCTACTCTTGTTCAAGTCCCAACCTGCTCTCCTCTAAAGGGGTTGTTTGAGACTTTGAGTGATGTTCATATTAGGAAGTATTTGGATTACTAGCCCTAGATTTCACTTGCAAATTAAAGGAGATATTTCACACCAGGACTAGAGATTTAGGACTTATTTGGAATGATTGCCTAAGTGCTTAAAAACATTTTTTTTATACTTAAAAGCACTTTTTAAACACGTGGAAAGTCATTCCAAACATACTCTTATACTAGTTCACCCACTTCGATTGAGTTAGATCCAATATTCTACTCATGTTGTAGGTTACACAATAATCGATGGGAGAAGATAACACCAAACTAGATAAGTTTTCTCACTGTTTTTCTCTCTAAAAACAACTTAGATAAGTCTCTTTTCCTTGTATAGTCCCCCACCCCATTATCTTCAAAAAAGAGATAACTAAGGCTTAATTAGTATGTTGCTCAAGCCATGGTTCTGGCCATTTTGGAAATCCTGTCTTGCTTCTGGTGCTGCTGAGCCTACCTCTATAGATAGATGCTCGTATTTAGTTTTGAACTCAAGGATTAAATCTTGCACTAGTAATGCGCCCACACGTCTTTAACCAAAATTTTGATGGACTTGGTTTAGACCCCACAACTTAGCAGTTCTAGTTATCTTTTAAGCTGGAAATGGAGATGCCTTTTGCTTTCATGTTAATCAAGAGAAAATCATTACCCTTTGGCTTCTAGTTTTTCCTTCTGGTATTAGTATTCTCACTGAACCCATTCACCACACAACTCAAGTCACACTAATCTGAAGGATTTCCTGATACTAAGGACGTTACAAGTTGAAATCCAGTTTAAGGATATGAAAATGTGTTACACTTAAGATGTTGTTTTCCAAGTTTACTGTCGGTGCATGTGTTGTTGCTTAGACTAAGGACCATTCCTGGGTTCTAATTCCGAATAATGCACCTCAGATCGGGTTCCCCCAGTATGGAAGATATTGAGGCATTTTCTACATCATATCGAGCACGATTGGATGAGGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTATGCTTCATTTTTCCCTGTTCTAATTCCCTCATTTTTTTTTCCCGTATCATCAACCAATCTATCTTTAGCTTCTGAATGAGAAAATTTTCACTTCCATTAATCAAATTAGTTTTCTAATTGACAAGAGCAAAATAGAATTGCTCTCTTAGAACTACTCTGTTAGCTTTTGGGTCTAAACGGGTGTTAATCCTTCCTACATTATAAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGGATTCCTGACGAGCTGGATCGGTTCAAAGAGAGGACAATGTATGTGAAATACACAAACAATGTAGTTACAGCCAGTTCGTCCTCTGAGAATGATGGCATTTTCAAGCTTGTGTCATTCGACATAGAAGCAAAGTGCTGCACTTGGGGTTTAGCAGACGTGAAGATAAATCGAGAGAAGGCGGGAAAAGGAAGACCTCTAAGCAAAAAGCAAAGAGAGTGGCGTTTAGAAACTCCTTTTGATTCATTACGTTTGGTTAGGCTGTATTCTGATTGCTGATAATGCAATCAAATTTTGGTGGGAATTCAGCACCCCCTCAATCAAAGATGTATAGTAAATCCACATCTGTTGATTTTAAGATTGAAAATTTGTTGTTGATAAAACTTTAGAACAAGAAAGAGTTCCCTTCGACTCAATTTTGGAAGTCATTGGCTCACGCTTGGTGATCAAGAAGTTTAGCTTGGTATAGGAGTTTTCGAACTT

mRNA sequence

GCCATAGCAACACTGTGTTGTGACTCGTGAGCTTCATCATCCCCAACACTCTGTTCGGACGGTTTTGTTTCTTCTAACGCACATTAACGGATTTCAAGTCCCAAGAGCAGGAATGTTCTTGATTACGGCTCGTAATTTCAGACTCTCTGCGGTTTCCACTTCAATAATCCTTCCACGGAGTGGCTTCCGATGGTCTTCAATCTCCCCCAGAAATCTTCCCTTCCCATTTGTCGAGCATCGATTTTCTTCTACGTCGAACAATCCCCTATTACTTCATGCCAGAAAGAGAGACTCAGAATCAGAGCCAGTTCTCAAACGAAACATCGTCGAGGAAGTGTCGCAGGACGAAGAAGATGACGTCCTTCTCGACGAACTTGAAGAAGACTGGTCTTGGAAAAGTAAATTGACGGGACACGTTCTTGATTGCATAGATGAGATAATGGAAGATGATGGCGAAGATTACTTTGAAGAAGAGTATATGGAGGATAATGCTGAAGTTTATGAAGGGGATGGCGGGGAAGGAGGTGGAATTTCCCTTGCTGGGACATGGTGGGATAAAGAAGCACTGGCCATAGCTGAGGAGGTTATTCTTTCATTTCACGGTGAATTGAAGATTTATGCTTTCAAAACAGTCTCGAATTCCACTGTTCGAGTGCGGATTGAAAAGCTTTCTAACAAATCGGGTTCCCCCAGTATGGAAGATATTGAGGCATTTTCTACATCATATCGAGCACGATTGGATGAGGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGGATTCCTGACGAGCTGGATCGGTTCAAAGAGAGGACAATGTATGTGAAATACACAAACAATGTAGTTACAGCCAGTTCGTCCTCTGAGAATGATGGCATTTTCAAGCTTGTGTCATTCGACATAGAAGCAAAGTGCTGCACTTGGGGTTTAGCAGACGTGAAGATAAATCGAGAGAAGGCGGGAAAAGGAAGACCTCTAAGCAAAAAGCAAAGAGAGTGGCGTTTAGAAACTCCTTTTGATTCATTACGTTTGGTTAGGCTGTATTCTGATTGCTGATAATGCAATCAAATTTTGGTGGGAATTCAGCACCCCCTCAATCAAAGATGTATAGTAAATCCACATCTGTTGATTTTAAGATTGAAAATTTGTTGTTGATAAAACTTTAGAACAAGAAAGAGTTCCCTTCGACTCAATTTTGGAAGTCATTGGCTCACGCTTGGTGATCAAGAAGTTTAGCTTGGTATAGGAGTTTTCGAACTT

Coding sequence (CDS)

ATGTTCTTGATTACGGCTCGTAATTTCAGACTCTCTGCGGTTTCCACTTCAATAATCCTTCCACGGAGTGGCTTCCGATGGTCTTCAATCTCCCCCAGAAATCTTCCCTTCCCATTTGTCGAGCATCGATTTTCTTCTACGTCGAACAATCCCCTATTACTTCATGCCAGAAAGAGAGACTCAGAATCAGAGCCAGTTCTCAAACGAAACATCGTCGAGGAAGTGTCGCAGGACGAAGAAGATGACGTCCTTCTCGACGAACTTGAAGAAGACTGGTCTTGGAAAAGTAAATTGACGGGACACGTTCTTGATTGCATAGATGAGATAATGGAAGATGATGGCGAAGATTACTTTGAAGAAGAGTATATGGAGGATAATGCTGAAGTTTATGAAGGGGATGGCGGGGAAGGAGGTGGAATTTCCCTTGCTGGGACATGGTGGGATAAAGAAGCACTGGCCATAGCTGAGGAGGTTATTCTTTCATTTCACGGTGAATTGAAGATTTATGCTTTCAAAACAGTCTCGAATTCCACTGTTCGAGTGCGGATTGAAAAGCTTTCTAACAAATCGGGTTCCCCCAGTATGGAAGATATTGAGGCATTTTCTACATCATATCGAGCACGATTGGATGAGGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGGATTCCTGACGAGCTGGATCGGTTCAAAGAGAGGACAATGTATGTGAAATACACAAACAATGTAGTTACAGCCAGTTCGTCCTCTGAGAATGATGGCATTTTCAAGCTTGTGTCATTCGACATAGAAGCAAAGTGCTGCACTTGGGGTTTAGCAGACGTGAAGATAAATCGAGAGAAGGCGGGAAAAGGAAGACCTCTAAGCAAAAAGCAAAGAGAGTGGCGTTTAGAAACTCCTTTTGATTCATTACGTTTGGTTAGGCTGTATTCTGATTGCTGA

Protein sequence

MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

Homology

[Close]

BLAST of Lsi08G005230 vs. ExPASy Swiss-Prot
Match: B8CW69 (Ribosome maturation factor RimP OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=rimP PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 8.2e-04
Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 172 KTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGV 231
           K   N  +RV IE   N  G  +++  E  S +   +LDE +    + E+  LEVSSPG+
Sbjct: 30  KEGENRVLRVFIE---NPEGEVTLDHCENVSKNLDEKLDEVD---PIQESYILEVSSPGI 89

Query: 232 ERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFK 272
           ER ++  ++ DRF  +  Y+K        S + E  GI K
Sbjct: 90  ERPLKKKEDFDRFSGKLAYIK---TFAPVSGNKEITGIIK 120

[Close]

BLAST of Lsi08G005230 vs. ExPASy Swiss-Prot
Match: B0SH16 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=rimP PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 8.2e-04
Identity = 24/71 (33.80%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 175 SNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERV 234
           +++ + + ++ L++K+GS S+ED E  S   +  LD+         + +L+VSS G ERV
Sbjct: 32  NHALIEIELDHLTDKTGSASLEDCETVSRRLKEELDQ----WGEEFDFTLQVSSAGAERV 91

Query: 235 VRIPDELDRFK 246
           +R+P++L RF+
Sbjct: 92  LRLPEDLIRFQ 98

[Close]

BLAST of Lsi08G005230 vs. ExPASy Swiss-Prot
Match: B0SQH2 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) OX=456481 GN=rimP PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 8.2e-04
Identity = 24/71 (33.80%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 175 SNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERV 234
           +++ + + ++ L++K+GS S+ED E  S   +  LD+         + +L+VSS G ERV
Sbjct: 32  NHALIEIELDHLTDKTGSASLEDCETVSRRLKEELDQ----WGEEFDFTLQVSSAGAERV 91

Query: 235 VRIPDELDRFK 246
           +R+P++L RF+
Sbjct: 92  LRLPEDLIRFQ 98

[Close]

BLAST of Lsi08G005230 vs. ExPASy TrEMBL
Match: A0A1S3B3P3 (uncharacterized protein LOC103485652 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485652 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 284/327 (86.85%), Postives = 300/327 (91.74%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+
Sbjct: 1   MLFITAPNSALSAVSTPPSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKRN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SES+PVLK NIV+EVS+DEEDDVL+DE EE         GHVLD +DEIMEDDGEDYFEE
Sbjct: 61  SESQPVLKPNIVQEVSEDEEDDVLVDEFEE---------GHVLDSVDEIMEDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           EYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+
Sbjct: 121 EYMEDNAEVYEGDGGEGGGISLAGIWWDKQALAIAEEVILSFHGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSPSMEDIEAFST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPSMEDIEAFSTTYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Sbjct: 241 LDRFKERAMYVKYTNDVVTASSSSESDGVFKLVSFDIEAKCCTWGIADVKINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 328
           PLSKKQREWRLETPFDSLRLVRLYSDC
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 318

[Close]

BLAST of Lsi08G005230 vs. ExPASy TrEMBL
Match: A0A5A7UZ84 (DUF150 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00410 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.8e-148
Identity = 279/327 (85.32%), Postives = 294/327 (89.91%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+
Sbjct: 1   MLFITAPNSALSAVSTPPSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKRN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SES+PVLK NIV+EVS+DEEDDVL+DE EE                DEIMEDDGEDYFEE
Sbjct: 61  SESQPVLKPNIVQEVSEDEEDDVLVDEFEE----------------DEIMEDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           EYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+
Sbjct: 121 EYMEDNAEVYEGDGGEGGGISLAGIWWDKQALAIAEEVILSFHGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSPSMEDIEAFST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPSMEDIEAFSTTYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Sbjct: 241 LDRFKERAMYVKYTNDVVTASSSSESDGVFKLVSFDIEAKCCTWGIADVKINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 328
           PLSKKQREWRLETPFDSLRLVRLYSDC
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 311

[Close]

BLAST of Lsi08G005230 vs. ExPASy TrEMBL
Match: A0A1S3B4D1 (uncharacterized protein LOC103485652 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485652 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.8e-148
Identity = 279/327 (85.32%), Postives = 294/327 (89.91%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+
Sbjct: 1   MLFITAPNSALSAVSTPPSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKRN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SES+PVLK NIV+EVS+DEEDDVL+DE EE                DEIMEDDGEDYFEE
Sbjct: 61  SESQPVLKPNIVQEVSEDEEDDVLVDEFEE----------------DEIMEDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           EYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+
Sbjct: 121 EYMEDNAEVYEGDGGEGGGISLAGIWWDKQALAIAEEVILSFHGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSPSMEDIEAFST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPSMEDIEAFSTTYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Sbjct: 241 LDRFKERAMYVKYTNDVVTASSSSESDGVFKLVSFDIEAKCCTWGIADVKINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 328
           PLSKKQREWRLETPFDSLRLVRLYSDC
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 311

[Close]

BLAST of Lsi08G005230 vs. ExPASy TrEMBL
Match: A0A6J1K3N1 (uncharacterized protein LOC111489765 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489765 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.9e-144
Identity = 274/326 (84.05%), Postives = 292/326 (89.57%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M LIT  NFRLSAV  S ILP+SGFR S ISPRNLPFPFV HRF STSNNPLLLHARK++
Sbjct: 1   MVLITVGNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SESEPV+KRNIVEEVS+DEEDDVLLDEL+ED               DEIM+DDGEDYFEE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDVLLDELDED---------------DEIMDDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           E+MEDNAEVY GDGGEGGGISLAGTWWDKEALA+AEEVILSF G+LKIYAFKTVSNSTV+
Sbjct: 121 EFMEDNAEVYVGDGGEGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSP MEDIEAFS+ YRARLDEAEL+K+VPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPRMEDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKY N+VVT SSSSE+DGIFKLVSFDIE +CC WGLADV+INREKAGKGR
Sbjct: 241 LDRFKERAMYVKYANDVVTPSSSSESDGIFKLVSFDIETRCCIWGLADVRINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSD 327
           PLSKKQREWRLETPFDSLRLVRLYSD
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSD 311

[Close]

BLAST of Lsi08G005230 vs. ExPASy TrEMBL
Match: A0A6J1FH63 (uncharacterized protein LOC111445430 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445430 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 9.3e-144
Identity = 272/326 (83.44%), Postives = 292/326 (89.57%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M +IT RNFRLSAV  S ILP+SGFR S ISPRNLPFPFV HRF STSNNPLLLHARK++
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SESEPV+KRNIVEEVS+DEEDD LLDELE+                DEIM+DDGEDYFEE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELLDELED----------------DEIMDDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           E+MEDNAEVY GDGGEGGGISLAGTWWDKEALA+AEEVILSF G+LKIYAFKTVSNSTV+
Sbjct: 121 EFMEDNAEVYVGDGGEGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSP MEDIEAFS+ YRARLDEAEL+K+VPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPRMEDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKYTN+VVT SSSSE+DGIFKLVSF+IE +CC WGLADV+INREKAGKGR
Sbjct: 241 LDRFKERAMYVKYTNDVVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSD 327
           PLSKKQREWRLETPFDSLRLVRLYSD
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSD 310

[Close]

BLAST of Lsi08G005230 vs. NCBI nr
Match: XP_038884405.1 (uncharacterized protein LOC120075260 [Benincasa hispida])

HSP 1 Score: 552.4 bits (1422), Expect = 2.7e-153
Identity = 289/327 (88.38%), Postives = 301/327 (92.05%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M LIT RN RLSAVSTS+ILP SGFRWSSISPRNLPFPFVEHR  STSNNPLLLHARKR+
Sbjct: 1   MVLITTRNSRLSAVSTSLILPHSGFRWSSISPRNLPFPFVEHRLPSTSNNPLLLHARKRN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SESEPVLKRNIVEEVS+DEEDDVLLDELEE                DEIMEDDGEDYFEE
Sbjct: 61  SESEPVLKRNIVEEVSEDEEDDVLLDELEE----------------DEIMEDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           +YME NAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHG+LKIYAFKTVSNSTV+
Sbjct: 121 KYMEGNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSPSMEDIEAFST+YRARLDEAELAKSVPEN+SLEVSSPGVERVV+IPDE
Sbjct: 181 VRIEKLSNKSGSPSMEDIEAFSTTYRARLDEAELAKSVPENLSLEVSSPGVERVVQIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKYTN+V TASSSSE+DGIFKLVSFDIEAK CTWGLADVKINREKAGKGR
Sbjct: 241 LDRFKERAMYVKYTNDVATASSSSESDGIFKLVSFDIEAKYCTWGLADVKINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 328
           PLSKKQR+WRLETPFDSLRLVRLYSDC
Sbjct: 301 PLSKKQRDWRLETPFDSLRLVRLYSDC 311

[Close]

BLAST of Lsi08G005230 vs. NCBI nr
Match: XP_008441558.1 (PREDICTED: uncharacterized protein LOC103485652 isoform X1 [Cucumis melo])

HSP 1 Score: 548.9 bits (1413), Expect = 3.0e-152
Identity = 284/327 (86.85%), Postives = 300/327 (91.74%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+
Sbjct: 1   MLFITAPNSALSAVSTPPSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKRN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SES+PVLK NIV+EVS+DEEDDVL+DE EE         GHVLD +DEIMEDDGEDYFEE
Sbjct: 61  SESQPVLKPNIVQEVSEDEEDDVLVDEFEE---------GHVLDSVDEIMEDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           EYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+
Sbjct: 121 EYMEDNAEVYEGDGGEGGGISLAGIWWDKQALAIAEEVILSFHGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSPSMEDIEAFST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPSMEDIEAFSTTYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Sbjct: 241 LDRFKERAMYVKYTNDVVTASSSSESDGVFKLVSFDIEAKCCTWGIADVKINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 328
           PLSKKQREWRLETPFDSLRLVRLYSDC
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 318

[Close]

BLAST of Lsi08G005230 vs. NCBI nr
Match: XP_008441560.1 (PREDICTED: uncharacterized protein LOC103485652 isoform X2 [Cucumis melo] >KAA0058895.1 DUF150 domain-containing protein [Cucumis melo var. makuwa] >TYK23728.1 DUF150 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 533.9 bits (1374), Expect = 9.9e-148
Identity = 279/327 (85.32%), Postives = 294/327 (89.91%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+
Sbjct: 1   MLFITAPNSALSAVSTPPSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKRN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SES+PVLK NIV+EVS+DEEDDVL+DE EE                DEIMEDDGEDYFEE
Sbjct: 61  SESQPVLKPNIVQEVSEDEEDDVLVDEFEE----------------DEIMEDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           EYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+
Sbjct: 121 EYMEDNAEVYEGDGGEGGGISLAGIWWDKQALAIAEEVILSFHGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSPSMEDIEAFST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPSMEDIEAFSTTYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Sbjct: 241 LDRFKERAMYVKYTNDVVTASSSSESDGVFKLVSFDIEAKCCTWGIADVKINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 328
           PLSKKQREWRLETPFDSLRLVRLYSDC
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSDC 311

[Close]

BLAST of Lsi08G005230 vs. NCBI nr
Match: XP_022993908.1 (uncharacterized protein LOC111489765 isoform X1 [Cucurbita maxima])

HSP 1 Score: 521.9 bits (1343), Expect = 3.9e-144
Identity = 274/326 (84.05%), Postives = 292/326 (89.57%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M LIT  NFRLSAV  S ILP+SGFR S ISPRNLPFPFV HRF STSNNPLLLHARK++
Sbjct: 1   MVLITVGNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SESEPV+KRNIVEEVS+DEEDDVLLDEL+ED               DEIM+DDGEDYFEE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDVLLDELDED---------------DEIMDDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           E+MEDNAEVY GDGGEGGGISLAGTWWDKEALA+AEEVILSF G+LKIYAFKTVSNSTV+
Sbjct: 121 EFMEDNAEVYVGDGGEGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSP MEDIEAFS+ YRARLDEAEL+K+VPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPRMEDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKY N+VVT SSSSE+DGIFKLVSFDIE +CC WGLADV+INREKAGKGR
Sbjct: 241 LDRFKERAMYVKYANDVVTPSSSSESDGIFKLVSFDIETRCCIWGLADVRINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSD 327
           PLSKKQREWRLETPFDSLRLVRLYSD
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSD 311

[Close]

BLAST of Lsi08G005230 vs. NCBI nr
Match: XP_023550697.1 (uncharacterized protein LOC111808765 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.0 bits (1338), Expect = 1.5e-143
Identity = 272/326 (83.44%), Postives = 291/326 (89.26%), Query Frame = 0


Query: 1   MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRD 60
           M +IT RNFRLSAV  S ILP+SGFR S IS RNLPFPFV HRF STSNNPLLLHARK++
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISSRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEE 120
           SESEPV+KRNIVEEVS+DEEDD L DELE+                DEIM+DDGEDYFEE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELFDELED----------------DEIMDDDGEDYFEE 120

Query: 121 EYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVR 180
           E+MEDNAEVY GDGGEGGGISLAGTWWDKEALA+AEEVILSFHG+LKIYAFKTVSNSTV+
Sbjct: 121 EFMEDNAEVYVGDGGEGGGISLAGTWWDKEALAMAEEVILSFHGDLKIYAFKTVSNSTVQ 180

Query: 181 VRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDE 240
           VRIEKLSNKSGSP MEDIEAFS+ YRARLDEAEL+K+VPENISLEVSSPGVERVVRIPDE
Sbjct: 181 VRIEKLSNKSGSPRMEDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDE 240

Query: 241 LDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR 300
           LDRFKER MYVKYTN+VVT SSSSE+DGIFKLVSFDIE +CC WGLADV+INREKAGKGR
Sbjct: 241 LDRFKERAMYVKYTNDVVTPSSSSESDGIFKLVSFDIETRCCIWGLADVRINREKAGKGR 300

Query: 301 PLSKKQREWRLETPFDSLRLVRLYSD 327
           PLSKKQREWRLETPFDSLRLVRLYSD
Sbjct: 301 PLSKKQREWRLETPFDSLRLVRLYSD 310

[Close]

BLAST of Lsi08G005230 vs. TAIR 10
Match: AT1G77122.1 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 311.6 bits (797), Expect = 7.4e-85
Identity = 183/324 (56.48%), Postives = 232/324 (71.60%), Query Frame = 0


Query: 11  LSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRN 70
           L A S S +   + FR    S  +L F F    F  T N     HA++++  S    K N
Sbjct: 19  LPAFSISNLSAVNRFR----STTSLRFGFPATPFRRTPNFTFKTHAKRKNKTSTFEPKPN 78

Query: 71  IVEEV-------SQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEEEYM 130
            VEE+        ++EE+ VL +E++E+   + +L   +LD  DE  EDD +D+   E+ 
Sbjct: 79  KVEELIIEEEEEEEEEEEIVLPEEIQEN---QDEL---LLD--DEYDEDDDDDF---EFD 138

Query: 131 EDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRI 190
           E   E+Y GDGG GGGI LAGT WDK ALA+A +V  SF G+L IYAFKT+ NST++VRI
Sbjct: 139 ESEEELYAGDGGGGGGIKLAGTLWDKVALALAVKVCESFDGDLGIYAFKTLPNSTIQVRI 198

Query: 191 EKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDR 250
           E+L+NK GSP+MEDIEAFST YRA+L EAELAKS+P+NISLEVSSPGVERVVRIP +LDR
Sbjct: 199 ERLTNKFGSPTMEDIEAFSTIYRAKLAEAELAKSIPDNISLEVSSPGVERVVRIPQDLDR 258

Query: 251 FKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLS 310
           +K+R MYV+YTN      + +E DGIF+LVSFD+EAK C WG+AD+++NREKAGKGRPLS
Sbjct: 259 YKDRPMYVRYTNE----DTETEGDGIFRLVSFDVEAKICIWGIADIRVNREKAGKGRPLS 318

Query: 311 KKQREWRLETPFDSLRLVRLYSDC 328
           KKQREWRLET F+SLRLVRL+S+C
Sbjct: 319 KKQREWRLETAFESLRLVRLHSEC 323

[Close]

BLAST of Lsi08G005230 vs. TAIR 10
Match: AT1G69210.1 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 178.7 bits (452), Expect = 7.5e-45
Identity = 116/312 (37.18%), Postives = 175/312 (56.09%), Query Frame = 0


Query: 15  STSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEE 74
           S+S++LP++  R +   PR  PF      FSS+S++P             P  +      
Sbjct: 32  SSSLLLPKTTTRLT--LPRYFPFSSSISTFSSSSSSP------------SPSARPPKTAG 91

Query: 75  VSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDG 134
            + DEED           +++ K T  V     E++ED  ED  E+E +E       GDG
Sbjct: 92  SNGDEED-----------TFEYKATDDV-----EVIEDWEED--EDEDVESQL----GDG 151

Query: 135 GEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPS 194
           G+GGGI L G  W +  L+IA +V+     +L+++AFKT     + VR++KLS + G P+
Sbjct: 152 GDGGGIVLKGVAWGERVLSIAAQVLKQSEKDLELFAFKTSPRGYIYVRLDKLSTEYGCPT 211

Query: 195 MEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYT 254
           M+++E FS  ++ RLD+A   K +PE+++LEVSSPG ER++R+P++L RFK+  M V Y 
Sbjct: 212 MDELEEFSREFKKRLDDAGAEKVIPEDLALEVSSPGAERLLRVPEDLPRFKDMPMTVSYV 271

Query: 255 NNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETP 314
               T S  +   G+F L S D E+  C W LADV+ NR+   KGRPLS+KQ++ R+  P
Sbjct: 272 EE--TNSRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRPLSRKQKDLRITLP 305

Query: 315 FDSLRLVRLYSD 327
           F   + + LY D
Sbjct: 332 FADHKKINLYLD 305

[Close]

BLAST of Lsi08G005230 vs. TAIR 10
Match: AT1G69210.2 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18
Identity = 71/212 (33.49%), Postives = 113/212 (53.30%), Query Frame = 0


Query: 15  STSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEE 74
           S+S++LP++  R +   PR  PF      FSS+S++P             P  +      
Sbjct: 32  SSSLLLPKTTTRLT--LPRYFPFSSSISTFSSSSSSP------------SPSARPPKTAG 91

Query: 75  VSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDG 134
            + DEED           +++ K T  V     E++ED  ED  E+E +E       GDG
Sbjct: 92  SNGDEED-----------TFEYKATDDV-----EVIEDWEED--EDEDVESQL----GDG 151

Query: 135 GEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPS 194
           G+GGGI L G  W +  L+IA +V+     +L+++AFKT     + VR++KLS + G P+
Sbjct: 152 GDGGGIVLKGVAWGERVLSIAAQVLKQSEKDLELFAFKTSPRGYIYVRLDKLSTEYGCPT 207

Query: 195 MEDIEAFSTSYRARLDEAELAKSVPENISLEV 227
           M+++E FS  ++ RLD+A   K +PE+++LEV
Sbjct: 212 MDELEEFSREFKKRLDDAGAEKVIPEDLALEV 207

The following BLAST results are available for this feature:

BLAST of Lsi08G005230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8CW69	8.2e-04	33.00	Ribosome maturation factor RimP OS=Halothermothrix orenii (strain H 168 / OCM 54...	[more]
B0SH16	8.2e-04	33.80	Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Pato...	[more]
B0SQH2	8.2e-04	33.80	Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Pato...	[more]

BLAST of Lsi08G005230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3P3	1.4e-152	86.85	uncharacterized protein LOC103485652 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UZ84	4.8e-148	85.32	DUF150 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B4D1	4.8e-148	85.32	uncharacterized protein LOC103485652 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1K3N1	1.9e-144	84.05	uncharacterized protein LOC111489765 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FH63	9.3e-144	83.44	uncharacterized protein LOC111445430 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lsi08G005230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884405.1	2.7e-153	88.38	uncharacterized protein LOC120075260 [Benincasa hispida]	[more]
XP_008441558.1	3.0e-152	86.85	PREDICTED: uncharacterized protein LOC103485652 isoform X1 [Cucumis melo]	[more]
XP_008441560.1	9.9e-148	85.32	PREDICTED: uncharacterized protein LOC103485652 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_022993908.1	3.9e-144	84.05	uncharacterized protein LOC111489765 isoform X1 [Cucurbita maxima]	[more]
XP_023550697.1	1.5e-143	83.44	uncharacterized protein LOC111808765 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi08G005230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77122.1	7.4e-85	56.48	Uncharacterised protein family UPF0090	[more]
AT1G69210.1	7.5e-45	37.18	Uncharacterised protein family UPF0090	[more]
AT1G69210.2	1.2e-18	33.49	Uncharacterised protein family UPF0090	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028989	Ribosome maturation factor RimP, N-terminal	PFAM	PF02576	DUF150	coord: 171..232 e-value: 4.4E-7 score: 30.2
IPR035956	RimP, N-terminal domain superfamily	GENE3D	3.30.300.70		coord: 149..229 e-value: 5.7E-5 score: 25.4
IPR035956	RimP, N-terminal domain superfamily	SUPERFAMILY	75420	YhbC-like, N-terminal domain	coord: 170..232
None	No IPR available	PANTHER	PTHR34544	OSJNBA0006B20.18 PROTEIN	coord: 26..327
None	No IPR available	PANTHER	PTHR34544:SF1	OSJNBA0006B20.18 PROTEIN	coord: 26..327
IPR003728	Ribosome maturation factor RimP	HAMAP	MF_01077	RimP	coord: 149..327 score: 11.481916

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G005230.1	Lsi08G005230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042274	ribosomal small subunit biogenesis
cellular_component	GO:0005737	cytoplasm