Lsi08G004700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G004700
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	PLATZ transcription factor family protein, putative
Location	chr08: 12438417 .. 12439815 (-)
RNA-Seq Expression	Lsi08G004700
Synteny	Lsi08G004700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCGAACTGGCTTGGTATGCTTTTGAATACGAAATTCTACACTTCTTGCGATCTACATCCTAATCTCCGGGGAAATAAGAAAAGTGGATTCTGCATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAGTCCACGATCTTCATCGGCAGGTTCAAATCTGGAAATATGTATATCATGAAGTTGTGCGCGTTCAGGATATGGAGAAACAATTTTGCTGTTCAGAGATTCATGTATAATACATTCTTTCCCTTATTACAACTCCCTGTAAGATATTGATTTAATCGCTTTTCATAGAAAAAATTCCTGAATTCATTCCTTTTGTTGCTGATCCTTTTGCCTTATGTACTTGAATCATTGAGATTTGAGATATGTATACTTTTTTTCATAGTTTGTAAGCCAAAATTATCTGGTTTTTGAGCACTGGTAAACAATCAAAATGGAAAATGATATGTTCTTGAGGAAACCTCACAAGCTTGATTTTGATTCTTACCAATTTGAATGGATGAATATACGATATTCGTTAATTTGATCTAGTTTTAGTAATAGGAATAGAGTTTGTTTGTTATCAATTCTTTTGTTTGTTTTGTTTTCCACTCGTTGAAAATAATCAACATAAACTTGTAGCACTGTTAACTTTGCTTTTCTTTTATGGAATTCTATCTCTATGCCTCATTAACTTGAAGTCCCATTTGCTTGATTCTGCAGCCATATAAAGTAAATGGTAAAATAGCTGTTCATCTAAACTCTCGTAGTCAATCCGTCGACACGAAATCACCGAAGATGAAGTCCGGTAATCCTTGTGAAGACTGTGGTAGACATATACATGATCCTCATCGCTTCTGTTCAATCGCGTGCAAGGTTTATAAATATAAAAACCTTATCACAATTCTGTTACTCAGTAGAGTGATTGGACTAACTAAGATCATATTCTAAGCAATTTTATTATTACATCACACACAAATTGTTAACAATTCAAATGGTGTAAAAACATCAGGTTTCTGTGAACTCAAAGCTAAAGGACCAGAGCGTTGGAACCATCGAATCTCCGAGCCCGGATTCCGGTAACTTATCATTCAAGGACAAAACCACCCCTGAAACAGATGCAAGTGAATTGAAATTTACCATATCAATTGCAGAGTCCACAGAAGAGACAAAAACTAGCCCTTCATTTTCACAACCAAGAAAACGCAGAAGGAAAGGCATCCCTCACAGAGCTCCATTTTTTCTGATAAGATAAGATGCAACATTTTCCCTCTTCTTTTTAACTTCCCTTGTGGCTCTCAAATGTTATGCTGCTTAAATTTTATTTACCTTGGCTCATAAAATGCCTAGTAGTGAAATGAAATTATCAATATAAAATCATAATCAAAATGCTCCTCAACTCACTTTTGC

mRNA sequence

ATGGAATCGAACTGGCTTGGTATGCTTTTGAATACGAAATTCTACACTTCTTGCGATCTACATCCTAATCTCCGGGGAAATAAGAAAAGTGGATTCTGCATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAGTCCACGATCTTCATCGGCAGCCATATAAAGTAAATGGTAAAATAGCTGTTCATCTAAACTCTCGTAGTCAATCCGTCGACACGAAATCACCGAAGATGAAGTCCGGTAATCCTTGTGAAGACTGTGGTAGACATATACATGATCCTCATCGCTTCTGTTCAATCGCGTGCAAGGTTTCTGTGAACTCAAAGCTAAAGGACCAGAGCGTTGGAACCATCGAATCTCCGAGCCCGGATTCCGGTAACTTATCATTCAAGGACAAAACCACCCCTGAAACAGATGCAAGTGAATTGAAATTTACCATATCAATTGCAGAGTCCACAGAAGAGACAAAAACTAGCCCTTCATTTTCACAACCAAGAAAACGCAGAAGGAAAGGCATCCCTCACAGAGCTCCATTTTTTCTGATAAGATAAGATGCAACATTTTCCCTCTTCTTTTTAACTTCCCTTGTGGCTCTCAAATGTTATGCTGCTTAAATTTTATTTACCTTGGCTCATAAAATGCCTAGTAGTGAAATGAAATTATCAATATAAAATCATAATCAAAATGCTCCTCAACTCACTTTTGC

Coding sequence (CDS)

ATGGAATCGAACTGGCTTGGTATGCTTTTGAATACGAAATTCTACACTTCTTGCGATCTACATCCTAATCTCCGGGGAAATAAGAAAAGTGGATTCTGCATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAGTCCACGATCTTCATCGGCAGCCATATAAAGTAAATGGTAAAATAGCTGTTCATCTAAACTCTCGTAGTCAATCCGTCGACACGAAATCACCGAAGATGAAGTCCGGTAATCCTTGTGAAGACTGTGGTAGACATATACATGATCCTCATCGCTTCTGTTCAATCGCGTGCAAGGTTTCTGTGAACTCAAAGCTAAAGGACCAGAGCGTTGGAACCATCGAATCTCCGAGCCCGGATTCCGGTAACTTATCATTCAAGGACAAAACCACCCCTGAAACAGATGCAAGTGAATTGAAATTTACCATATCAATTGCAGAGTCCACAGAAGAGACAAAAACTAGCCCTTCATTTTCACAACCAAGAAAACGCAGAAGGAAAGGCATCCCTCACAGAGCTCCATTTTTTCTGATAAGATAA

Protein sequence

MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQPYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHDPHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAESTEETKTSPSFSQPRKRRRKGIPHRAPFFLIR

Homology

[Close]

BLAST of Lsi08G004700 vs. ExPASy TrEMBL
Match: A0A0A0KL89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G023890 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 149/208 (71.63%), Postives = 159/208 (76.44%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ-------- 60
           MESNWLG LLNTKFYTSCDLHPNL  NKKS FCIDCSVSFCKNCT+HDLHRQ        
Sbjct: 1   MESNWLGTLLNTKFYTSCDLHPNLWRNKKSRFCIDCSVSFCKNCTIHDLHRQVNIWKYVY 60

Query: 61  -------------------PYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHD 120
                              PYKVNGK+AVH+NS  QSVDTKSPK KS NPCE+CG+HIHD
Sbjct: 61  REVVRVQDMEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHD 120

Query: 121 PHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKD-KTTPETDASELKFTISIAES 180
           PHRFCSIACKV VNSK+KD SVGT+ S S DSGNLSFKD K +PET+ASEL+ TISIAES
Sbjct: 121 PHRFCSIACKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAES 180

[Close]

BLAST of Lsi08G004700 vs. ExPASy TrEMBL
Match: A0A6J1D0E9 (uncharacterized protein LOC111015876 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015876 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.8e-73
Identity = 135/180 (75.00%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQPYKVNGKI 60
           ME++W+G LLNTKF+TSCDLHP LR N+K+ FCIDCS+SFCKNC VHDLHRQ YKVNG++
Sbjct: 1   METDWIGTLLNTKFFTSCDLHPTLRKNEKNKFCIDCSISFCKNCRVHDLHRQTYKVNGEV 60

Query: 61  AVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHDPHRFCSIACKVSVNS-KLKDQSVGTIE 120
           +VHLNSR QSVDTKSPK KS   CEDCGRH+ DP+RFCS+ACKVSVNS K+K QS+GTI 
Sbjct: 61  SVHLNSRRQSVDTKSPKAKSRGSCEDCGRHVQDPYRFCSVACKVSVNSVKVKGQSIGTII 120

Query: 121 SPSPDSGNLSFKDKTTPETDASELKFTISIAESTEETKTSPSFSQPRKRRRKGIPHRAPF 180
           SPS D GNLS+K++T+PET+ASEL+ TISIAES EE K SPS S+PRKRRRKGIPHR+PF
Sbjct: 121 SPSLDFGNLSYKERTSPETNASELESTISIAESIEEIKASPSSSRPRKRRRKGIPHRSPF 180

[Close]

BLAST of Lsi08G004700 vs. ExPASy TrEMBL
Match: A0A6J1FR06 (uncharacterized protein LOC111447662 OS=Cucurbita moschata OX=3662 GN=LOC111447662 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.2e-69
Identity = 139/207 (67.15%), Postives = 155/207 (74.88%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ-------- 60
           ME++WLG LLNTKF+ SCDLHPNLR N+K+ FCIDCSVSFCKNCTVHDLHRQ        
Sbjct: 1   METDWLGTLLNTKFFASCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60

Query: 61  -------------------PYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHD 120
                               YKVNG+I+VHLNSR QSVD K PK KSG  CEDCGR++  
Sbjct: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120

Query: 121 PHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAEST 180
           P+RFCSIACKVSVNSKLKDQS+ TI S SPD GNLSFK+KT+ ET+ASEL+ TISIAES 
Sbjct: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKTSAETNASELESTISIAESR 180

[Close]

BLAST of Lsi08G004700 vs. ExPASy TrEMBL
Match: A0A6J1D096 (uncharacterized protein LOC111015876 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015876 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.2e-68
Identity = 135/207 (65.22%), Postives = 158/207 (76.33%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ-------- 60
           ME++W+G LLNTKF+TSCDLHP LR N+K+ FCIDCS+SFCKNC VHDLHRQ        
Sbjct: 1   METDWIGTLLNTKFFTSCDLHPTLRKNEKNKFCIDCSISFCKNCRVHDLHRQVNIWKYVY 60

Query: 61  -------------------PYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHD 120
                               YKVNG+++VHLNSR QSVDTKSPK KS   CEDCGRH+ D
Sbjct: 61  HDVVRVQDMEKFFRCSEIHTYKVNGEVSVHLNSRRQSVDTKSPKAKSRGSCEDCGRHVQD 120

Query: 121 PHRFCSIACKVSVNS-KLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAES 180
           P+RFCS+ACKVSVNS K+K QS+GTI SPS D GNLS+K++T+PET+ASEL+ TISIAES
Sbjct: 121 PYRFCSVACKVSVNSVKVKGQSIGTIISPSLDFGNLSYKERTSPETNASELESTISIAES 180

[Close]

BLAST of Lsi08G004700 vs. ExPASy TrEMBL
Match: A0A6J1K8W8 (uncharacterized protein LOC111491731 OS=Cucurbita maxima OX=3661 GN=LOC111491731 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.6e-68
Identity = 138/207 (66.67%), Postives = 154/207 (74.40%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ-------- 60
           ME++WLG LLNTKF+ SCDLHPNLR N+K+ FCIDCSVSFCKNCTVHDLHRQ        
Sbjct: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60

Query: 61  -------------------PYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHD 120
                               YKVNG+I+VHLNSR QSVD K PK KSG  CEDCGR++  
Sbjct: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120

Query: 121 PHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAEST 180
           P+RFCSIACKVSVNSKLKDQS+ TI S SPD GNLSFK+K + ET+ASEL+ TISIAES 
Sbjct: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180

[Close]

BLAST of Lsi08G004700 vs. NCBI nr
Match: XP_038893018.1 (uncharacterized protein LOC120081909 [Benincasa hispida])

HSP 1 Score: 315.8 bits (808), Expect = 2.4e-82
Identity = 159/207 (76.81%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ-------- 60
           MESNWL  LLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ        
Sbjct: 1   MESNWLSTLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQVQIWKYVY 60

Query: 61  -------------------PYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHD 120
                              PYKVNGK+AVHLN+RSQS+DTKSPK KSG+PCEDCGRHIHD
Sbjct: 61  HEVVRVQDMEKQFCCSEIHPYKVNGKVAVHLNARSQSIDTKSPKTKSGSPCEDCGRHIHD 120

Query: 121 PHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAEST 180
           PHRFCSIACKVSVNSKLKDQS+GT+ SPS +SGNLS KDK +PET+ASEL+ TISIAEST
Sbjct: 121 PHRFCSIACKVSVNSKLKDQSIGTVVSPSQNSGNLSLKDKISPETNASELESTISIAEST 180

[Close]

BLAST of Lsi08G004700 vs. NCBI nr
Match: XP_031741091.1 (uncharacterized protein LOC101214401 isoform X1 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-74
Identity = 149/208 (71.63%), Postives = 159/208 (76.44%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ-------- 60
           MESNWLG LLNTKFYTSCDLHPNL  NKKS FCIDCSVSFCKNCT+HDLHRQ        
Sbjct: 1   MESNWLGTLLNTKFYTSCDLHPNLWRNKKSRFCIDCSVSFCKNCTIHDLHRQVNIWKYVY 60

Query: 61  -------------------PYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHD 120
                              PYKVNGK+AVH+NS  QSVDTKSPK KS NPCE+CG+HIHD
Sbjct: 61  REVVRVQDMEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHD 120

Query: 121 PHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKD-KTTPETDASELKFTISIAES 180
           PHRFCSIACKV VNSK+KD SVGT+ S S DSGNLSFKD K +PET+ASEL+ TISIAES
Sbjct: 121 PHRFCSIACKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAES 180

[Close]

BLAST of Lsi08G004700 vs. NCBI nr
Match: XP_022146742.1 (uncharacterized protein LOC111015876 isoform X2 [Momordica charantia])

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 135/180 (75.00%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQPYKVNGKI 60
           ME++W+G LLNTKF+TSCDLHP LR N+K+ FCIDCS+SFCKNC VHDLHRQ YKVNG++
Sbjct: 1   METDWIGTLLNTKFFTSCDLHPTLRKNEKNKFCIDCSISFCKNCRVHDLHRQTYKVNGEV 60

Query: 61  AVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHDPHRFCSIACKVSVNS-KLKDQSVGTIE 120
           +VHLNSR QSVDTKSPK KS   CEDCGRH+ DP+RFCS+ACKVSVNS K+K QS+GTI 
Sbjct: 61  SVHLNSRRQSVDTKSPKAKSRGSCEDCGRHVQDPYRFCSVACKVSVNSVKVKGQSIGTII 120

Query: 121 SPSPDSGNLSFKDKTTPETDASELKFTISIAESTEETKTSPSFSQPRKRRRKGIPHRAPF 180
           SPS D GNLS+K++T+PET+ASEL+ TISIAES EE K SPS S+PRKRRRKGIPHR+PF
Sbjct: 121 SPSLDFGNLSYKERTSPETNASELESTISIAESIEEIKASPSSSRPRKRRRKGIPHRSPF 180

[Close]

BLAST of Lsi08G004700 vs. NCBI nr
Match: KAG6599925.1 (hypothetical protein SDJN03_05158, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.8 bits (691), Expect = 8.7e-69
Identity = 139/207 (67.15%), Postives = 155/207 (74.88%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ-------- 60
           ME++WLG LLNTKF+ SCDLHPNLR N+K+ FCIDCSVSFCKNCTVHDLHRQ        
Sbjct: 44  METDWLGTLLNTKFFASCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 103

Query: 61  -------------------PYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHD 120
                               YKVNG+I+VHLNSR QSVD K PK KSG  CEDCGR++  
Sbjct: 104 HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 163

Query: 121 PHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAEST 180
           P+RFCSIACKVSVNSKLKDQS+ TI S SPD GNLSFK+KT+ ET+ASEL+ TISIAES 
Sbjct: 164 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKTSAETNASELESTISIAESR 223

[Close]

BLAST of Lsi08G004700 vs. NCBI nr
Match: KAG7030608.1 (hypothetical protein SDJN02_04645 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.8 bits (691), Expect = 8.7e-69
Identity = 139/207 (67.15%), Postives = 155/207 (74.88%), Query Frame = 0


Query: 1   MESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNCTVHDLHRQ-------- 60
           ME++WLG LLNTKF+ SCDLHPNLR N+K+ FCIDCSVSFCKNCTVHDLHRQ        
Sbjct: 52  METDWLGTLLNTKFFASCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 111

Query: 61  -------------------PYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHD 120
                               YKVNG+I+VHLNSR QSVD K PK KSG  CEDCGR++  
Sbjct: 112 HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 171

Query: 121 PHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAEST 180
           P+RFCSIACKVSVNSKLKDQS+ TI S SPD GNLSFK+KT+ ET+ASEL+ TISIAES 
Sbjct: 172 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKTSAETNASELESTISIAESR 231

[Close]

BLAST of Lsi08G004700 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-21
Identity = 80/219 (36.53%), Postives = 110/219 (50.23%), Query Frame = 0


Query: 2   ESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNC--TV---HDLHR----- 61
           E  W+  LLN++F+  C  H  LR N+K+ FCIDC+V  C++C  TV   H LHR     
Sbjct: 10  EEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHRRLQIC 69

Query: 62  ----------------------QPYKVNGKIAVHLNSRSQSVDTK-SPKMKSGNPCEDCG 121
                                 Q YK+NG+ A+HLNSR Q+ D + S K K+G  C  C 
Sbjct: 70  KYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTCK 129

Query: 122 RHIHD-PHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTI 181
           R+I D P+ FCSI+CK+S  SK          SP  +   L  K+ +T E    E K   
Sbjct: 130 RYIQDHPNLFCSISCKISTPSKKHKFCF----SPKLEQSVLE-KEHSTQEGSLEEKKSCT 189

[Close]

BLAST of Lsi08G004700 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-14
Identity = 65/209 (31.10%), Postives = 90/209 (43.06%), Query Frame = 0


Query: 4   NWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCS----VSFC------------KNCTVH 63
           +WL  LL  KF+  C LH +   ++ + +C+DC+     S C            +  + H
Sbjct: 13  HWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYH 72

Query: 64  DLHR-------------QPYKVNGKIAVHLNSRSQSVDTKSPKMKSG--NPCEDCGRHIH 123
           D+ R             Q Y +N    V LN R Q      P+   G  N CE C R + 
Sbjct: 73  DVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQ------PRPGKGVINTCEVCYRSLV 132

Query: 124 DPHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAES 180
           D  RFCS+ CK+S  SK K +           + NLS  D +   T    LK    I  +
Sbjct: 133 DSFRFCSLGCKISGISKKKRKEW---------TNNLSDSDDSYSSTSIGRLKKNDDIMNN 192

[Close]

BLAST of Lsi08G004700 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.7e-12
Identity = 64/228 (28.07%), Postives = 91/228 (39.91%), Query Frame = 0


Query: 5   WLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDCSVSFCKNC---------------TVHDL 64
           WL  L+   F++SC +H   R ++K+ FC+ C +S C +C                 HD+
Sbjct: 21  WLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVYHDV 80

Query: 65  HR-------------QPYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHIHDPHR 124
            R             QPY +NG   + LN R Q     S    S N C  C R + +P  
Sbjct: 81  VRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQ-----SRAKVSSNVCFTCDRILQEPFH 140

Query: 125 FCSIACKV--------SVNSKLK--DQSVGTIESPSPDSGNLSFKDKTTPETDASELKFT 180
           FCS++CKV         ++S L   D+S  T E    D G+    + +T E     L  +
Sbjct: 141 FCSLSCKVDYLSYQGDDLSSILYRIDESDFTFEGLRMD-GHDQLGEISTMEDGEDILVIS 200

[Close]

BLAST of Lsi08G004700 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-11
Identity = 61/216 (28.24%), Postives = 80/216 (37.04%), Query Frame = 0


Query: 2   ESNWLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDC-SVSFCKNC---------------- 61
           E  WL  LL T F++ C  H     N+ + FC+ C + +FC  C                
Sbjct: 3   EPKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIRRS 62

Query: 62  TVHDLHR-------------QPYKVNGKIAVHLNSR------SQSVDTKSPKMKSGNPCE 121
           + HD+ R             Q Y +N    + LN R      S    + +PK  S   CE
Sbjct: 63  SYHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMS-YFCE 122

Query: 122 DCGRHIHDPHRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKF 180
            C R + DP RFCS+ CKV    K K++    +                           
Sbjct: 123 TCCRTLLDPFRFCSLGCKVEGMRKNKEEEEERLRK------------------------- 182

[Close]

BLAST of Lsi08G004700 vs. TAIR 10
Match: AT5G46710.1 (PLATZ transcription factor family protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.0e-11
Identity = 62/205 (30.24%), Postives = 85/205 (41.46%), Query Frame = 0


Query: 5   WLGMLLNTKFYTSCDLHPNLRGNKKSGFCIDC-SVSFCKNC-TVHDLHR----------- 64
           WL  LLN  F+  C  H +L   +   +C+DC + SFC  C + H+ HR           
Sbjct: 30  WLKPLLNQHFFAQCKFHGHLPRTECKMYCLDCTNDSFCSLCLSEHENHRTIQIRISSYHN 89

Query: 65  ----------------QPYKVNGKIAVHLNSRSQSVDTKSPKMKSGNPCEDCGRHI-HDP 124
                           Q Y +N    + LN R QS     P     N C  C R +  + 
Sbjct: 90  VTKVDEIQKYLDISSIQTYVINSSKVLFLNERPQS----KPGKGFTNACMVCYRGLAENC 149

Query: 125 HRFCSIACKVSVNSKLKDQSVGTIESPSPDSGNLSFKDKTTPETDASELKFTISIAESTE 180
            RFCSI CKV+  S +  + V    + S +S N S  +  +   +        ++   + 
Sbjct: 150 FRFCSIGCKVAGTSGVFQKRVKHTTNDSDNSNNSSGVENNSSGAENG----NSNLQSLSP 209

The following BLAST results are available for this feature:

BLAST of Lsi08G004700 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G004700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL89	1.1e-74	71.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G023890 PE=4 SV=1	[more]
A0A6J1D0E9	4.8e-73	75.00	uncharacterized protein LOC111015876 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FR06	4.2e-69	67.15	uncharacterized protein LOC111447662 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A6J1D096	1.2e-68	65.22	uncharacterized protein LOC111015876 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1K8W8	1.6e-68	66.67	uncharacterized protein LOC111491731 OS=Cucurbita maxima OX=3661 GN=LOC111491731...	[more]

BLAST of Lsi08G004700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893018.1	2.4e-82	76.81	uncharacterized protein LOC120081909 [Benincasa hispida]	[more]
XP_031741091.1	2.4e-74	71.63	uncharacterized protein LOC101214401 isoform X1 [Cucumis sativus]	[more]
XP_022146742.1	1.0e-72	75.00	uncharacterized protein LOC111015876 isoform X2 [Momordica charantia]	[more]
KAG6599925.1	8.7e-69	67.15	hypothetical protein SDJN03_05158, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030608.1	8.7e-69	67.15	hypothetical protein SDJN02_04645 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi08G004700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01818.1	1.9e-21	36.53	PLATZ transcription factor family protein	[more]
AT1G32700.1	1.0e-14	31.10	PLATZ transcription factor family protein	[more]
AT1G31040.1	4.7e-12	28.07	PLATZ transcription factor family protein	[more]
AT2G27930.1	2.3e-11	28.24	PLATZ transcription factor family protein	[more]
AT5G46710.1	3.0e-11	30.24	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 52..104 e-value: 1.0E-11 score: 45.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..177
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 52..179 coord: 3..52
None	No IPR available	PANTHER	PTHR31065:SF41	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 52..179 coord: 3..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G004700.1	Lsi08G004700.1	mRNA