Lsi08G004240 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G004240
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	glutamic acid-rich protein-like isoform X2
Location	chr08: 11760297 .. 11769625 (-)
RNA-Seq Expression	Lsi08G004240
Synteny	Lsi08G004240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTCCTGTCAAGCAGAGTCATTCTTGGAAAGTCCCAACACACCTTCAGTCCAGAGCCCATAATTTCTTCCTTCGCACAAAAATCGGTGCGAGTCGAAGAACAGCAAAATGGCGGAGGAATTACAGGACAACGATGCTTCAAACGAAGAAGCCATGGATGTAGCTGTTGATATAGAGACGAAAATTCAGAACGCTATGCGCTCTCGCGTTTCTCACTTCAAGGAACAAGCCGAGTGAGCTTTTCTCTTTTTCACTTAGTCTCATTTTCCGTGACCGTAATTCGTCTATGTATTCTTGTGAAGCTTATGTTGTAGTTTGTGGTTTTTGCGAGGAGTTTCTCTTCTTCTCTATGATTTTTGGTGTTTTGTTTTCAATTGCTGTTAATGATGCTGTAATGTTTATCCTGCACCTGGGAAAATGCTTATTAGACCACCTCTAGGTGATTTTTTGTTCATATTTATTTCTATACTGGTTATATTTTCCTCGTTTAGTTTTATTATGTGTGCGTATGTTTTGGGAGTTTTGCAAGTTTTCAAACCTATACCGTCAGCTGAGTTTCTTGTCTCTAAGTTCACGGTGGTTCTAGGGTTTCTTTTGGGCGTGGCAATCTGTAAAAGAGAGGTGGATTTTGTATCTCTTCTGTTCTTCTCTGCATGGTTAAATGTTTGGGCGGTTGTATAAGCGGCTGTTAGTGTTTGATATCAAATTGTAGGTTCCTGTTGAAACATAAGACAATAATAACGTTCACGTCACTTTCTTGCATGTAGATGCACGTGTGTAGCAACAGAACCTTTACATTTGTTTGTAATTGTTAATTTTTGAATTGGCATAATCATATTGTTCCATTTCATTTTCTCTCTTTCATGGTCACTGAGGAAAAATTGTAGGTCCTTAACTGCTAGCCACGTTGCGGTGGTCTCCTAAATAATTTCTCGTCATAGGTAGTTGGTTTGGAAACCAATTTCATATCAGTTGCTAAATTTTGTTTTCAAAACTAATTTTTAATAACCATGGATGGGCGGCTGGTAAAAATTAAGTGTTTTCTAGAATATTACATTGCAAACGCAGGGTAGGTACTTGAACCGACAATTTTTAGGAGGTAGAGATGAGATGACTTACCATTGAGCTCTAGTTTTAAAATTAGTTACCAAACGTTATTTCACTATTCTGTTTTCTCATAAGCACAAAAACAGGTTTGAAATGTCTCCCAAACAAGAATTTGGACTTCTTGTTTCATTGCACACTTGCCTATTTTGTGCCCTTGACAAGTATTTTTATGCCATAGATCCAAAACCAGCTGGAATTTGAACACCTGGTATAGAGCAATTGTCTTAAGTTCAGGTTGTGTATAATTATCAACAATGTGAGTGGATTTGAATGAACTTTGCCGTTATTTCAAGGATAAGACATTAGGATGTTGTTCTGCATCCTGCATTTGAAAATTTGCGTACTTTCCTTTCAAAATGTAAGAGCTGTTGATATCACCGCAGGAGATTATTATGGGCTCAAGATACCAGTCCTTGTATAAAAATCCAACGACATTGTTAACCACCTGATATAGCTTAAAAGATAAAAGAAGAATTTTCTCTAAGAATCAAATCAAAGTCTTTATTATCCATTAAAAGTTAACAATATAAGAAGACAATTTCATTATTTATAGATAATTGAAAAGCAAACTAATCCTAATTAATAAAAGAAACTAATCCTAATCCTAATAAACCAAAGAAACTAATACTAATCCTAATCAATTGAGGAAACTAATCATAATCCTAATAAATTAAAGATTTGACCAATATATCCTAATTTTCTTTAATTGTACTACATCATTCTATCCCTCTTAAAAGCATAAAAGAAATTCATCTTCCAAGTTGATTGAATACAGATTATAGAGTGGCTTGAGGAAAAAACTGCTTAGTTAAATAACGTTGAAAATGAGTTGGGTTAATTCTGTAAAAAGTTTGGGCTTGGTTGGATTAAGGAAAAAACAATGAAGAGAGCCAAAGCTGGATAAGGTTTTGTGCGGATTGTGGGGGCCAAAATGAAGGGAACTGGTTAGAGATCTAGTTGTGTGGGGTTTGGGCAAAAAGACTCATCACGCTGGTGAGATCAGGGGTTCCAATTTCTTCCTTCTCACCTTCTTTGTCTTTGCACACAACAACACAAGTTTCTTCGTTCTTTTTTTCCTCCTTTGTAATGTTGGTGAATTCATGTGGGAACCTTAAAATCTTTGGTTTGGGTCGCGCAAGTAATGGATTGAAAATAATCGCCCAACTTTTTCCTACGAACATGTTTTCATCCTCCTTGTTACATGCGATAACACAATTCTTTTACCAAAAAAAAAAAAAAGTTACATGCGATAACACAAAAGGTTTTGTCGATTAATTCTTCCCCTTCCTTGACTCCTGTAACTTTATTTAACAATAGGCTTTGATTCACCTCTGTTCTATGTCGTGTCCATTCATCTTTGTTTTCGCTTGAATCTGTTTCGTTTGTCTCTTCTTCTTCTTTTCCTTCTTCGATCAACTTCTCTTCTTCTTCTTCAGGCGATAGTCTTCCCCTTCAATTTGGCTTGCTTGTATTTCACCCTTGCGCTTCAACCATGATTCATTGGGTTTTTCTTATACAAATTCACAGCTTTGAGTGATTTCTAGCCTTTCTTGAATTTTTCCCCAGAAGTCCCTAGATTTCATCCATTCCCCTCTGAAAGTCCTCCTAATAGATGTTCTTATTTGAATATTTCTGTTTTCTTGAAAATGTTTCAACCTCCATGTTGGTGTTATGATGATTCATTAGTGTTCTTTGATGTTGGTCATAATATTTTCTTTCACACTCTAAATCATTTTTTGAATCATCTAACTCCCAATTCTTATGATGATTTCTTGAAAATATGTTAGATTAGATTGTTGGGCGCTTTGTTGATAATGTCGATTTGTTATTCTGTCCCAAACTACATTAGAATCTTCATTAGAATCGCTAGAATCAAATTTCCAATGTGGATAATGATAGGTTCTTTGAGAAAATCGAGCATGAGTAAAATTATTATGTTGGAATTCTTCTTCTGAATCACTCGAGTCAGAACTCCAGCACTATTATTGGGAGTAAATTTGACTTTCTTGCCTATACCAACTGCTATATTTTTTCTTGGGCATCTTTCTAGATCAGTAATAGTTCAATATTTCAAAATCTTGAAAAAATCATCGGTTTCTTTTTTCCTTTCCAGAATTTAAAGGGTTCCCCCTAATTAGACGTGTGTTGTTCGGCAATGAGCACAGCTCACGGAACTCTCTCTTGTGACCGGCGTCGCCGAAAATTTTCTGGTCTTCCACCGGTGGTAGTCAAAGTTGGCCCAAGTGGTTGCTCTGATACCAAATTGATGTAGCCTAAAAGACAAAAAGAGAACTTTCTCAAAAATCAAATCAAAGTCTTTATTATCAATTAAAGTTATCAATAGAAGAAGACAGTTCCTCTATTTGTAGAGAATTGGAAAGCAAACTAATCCTAATCCTAATTCTGATTAATCAAAGAAACTAATTCTAATCATAATAAACTAAGGAAACTAATCCTAACCTTAATCCTAATCAATCAAGGAAACCAATCATAATCCTAATAAATTAAGGATTTGACTAAGATATCATAATTTACTCTAATTCTACTACATCACCATTATTTAGGGACTGGTTAGAAAGTTTGGATAATGTGTAAATATAAGTATGTAACCTTACTGGCGGCAGCAGCATAGCTGGAAGCCTTGCCTCATTATAAGTTTTTTCAGTTACAAGAAATTTTATTTATTACTTTATTAATTTATAAACCTTAATTATAAGAATAGTTAAAACATTGATATATACAATCTTCTATTTATTGTCTGTTTTTGGTTACAGCTCTTTAACTTTTGAGGGGGTTAGAAGATTGCTAGAAAAGGACTTGTGTATGGAGACGTATGCATTAGATGTGCATAAAAGGTATATCAAGCAGTGTTTGGTGAAGGTAATGTTTTCTTCTTCCTTTGTATGTGCAGTGTTTTTAAATGCCCAAGGCGCACTACGGCACAAGGCGCACTATGGCACAAGGCGCACAAAAAAGTGCGGGCCTTTTTTTGCGAGGCGCACTATATAAAGAGGGAAAATTGCACAAACTACTCCTAAACTATGAGATTTGTTACAATTACACCCTTAAATTTCTAATTTAATCAATTACTCCCTATAGTTTATTAACTGTTGCAATAAGCCCTTTTGTGTTAGTTGAGGTTCAACTAGAAAATGACAAACTTGTCAATTCACATATCTGTAATAAAAAAACCCACTCCTGTCGTCGCCACCACCTGTTTCGAATCCACCTTCGTCGAGGATCTCCACCGTAGCCCCAACCCTGTGGTGCCTGACAACCCCCTCTCCTCCGCCGACGACCGCCACAACAACCCTCCTCTAGACTGGGATGAACGTACTCTTCAAAATTTGGATTGGAACTTCATCATAGGCAATTTGCGGTTACATGATGATTCCAATTCTGCTCTAAAAAACTACATCACTGCCAGCACCAACAATAATCATCATCGTGTTCCTCACTTCCTTGAATTTCTCCACTCCCAATCCTTGGATCAAAATGCCCACCTCCTTCCCCCTGATTTCTTCCTCTCCCCTTTTCCAATAATCACTCCCCCACCATCCTCCAAACCTTCAATTCCTTCAATTCCAACAACCCATCTCTCGATTTCATCGAACATCTTGTTGCTGCTGCCGATTGCTTCGATTTCTAACTCGCTCATGTGATACTCATTATCAGACCCTTGGCTCCCTTCCTTGACATTTTTTAACCAAAAAATTAGGGTTCTCTCTATCCGTGGAAGGAGTATTGGAAGACAAGATTTTTTTTGGAAGAGAAAGAAATAAGGAGCGACGGCAAGTAACTCGATGAAGACTTCGAGATTCAGTCTCTGGCCCTATTTGACCATAATACCCAAGTTTATTTGGAAAAGAAGCATTGGAGACCTCATCGGCAACAATCTTGGACTGATTGGAGGTCAACATAAACTTGAATCTTCCTTTTTACAGATATGTGAATTGACGAATTTGCTATTTTTAATTCAACATCAACTAATACAAGCGGTTTATTGCAACACTTAATAAACTATAGGGGGCTAATTGATCAAAATAAAAATTTAAGGGTGTAATTGTAGCAAACCCCATAGTTCAGGGGTGGTTTGTGCAATTTTCTCATGTAAAAATATTACATTAAAAAGAGAAAGCATAGTTGGAGTGGAAATATGAAAAAAAAAAAAAAAGACCCCAAACACAAGAAATTTTGCATTTAGGCTTAATAAACTTGATTCTTTTAGTTAATAAAGAAGGACAACCCTTAATTTATTGAGTTGTTTTTAAATATAGAAAAATGAAACTAAACTATTTATAAATATAAAAAAATTTCACTGTCTATTAGCGATAGACTGCGATAGACTTCTATCGCCTGAGCGATAGACCGCAAAAGACTACTATTGCTCAAATGATAGAAGTCTATCGCGGATAAATAATGAAATTTTCCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATACTAATTTTTCTAATTTATTACTATTTTTTAAAAATAATGAAAAAGCCCAAAGCCCAGGACTTTGAGCCTTGGGGCTTCACAAAAGGTGCAAGCCCAACCAGACCTGTGCCTTGAGCCTAGGCGCACGCCCGAGAGGGCTTTTTAAAACACTGTGTATGTGATATCTTACTTTTCTTGGAGGTGGAAACCTATTTCTGTTATTCCTTCTGTTCAATGATATCATGTTCAGTAATTTTTATTTTTGATATGTGGTGACATTCGATAAGTTTTTATATTTTAATGAAAGATGGCAATTGAAAGAGTAGAAGAGCCTCTAGGAAAAAGTGTTTTTATCTTTTCTTTTGTTAGTACAATGTTTTATGAGAAGCTAAAGTCAAGTTGCCAAAGTTCTATAATAAGAATGTAGAGCTAAGAAATGTGCTCTTGTAGGTTTATTGATTGAGTATTAGGATAATCCTTCCCTTCCCCAATGGACAAACGATATAGACATATCATGACATCAAGTTGTGTGAGTCCAGACTAATGAACCCATAAATCACAGAAGGAACCTATATCTGCTTGGCATGAATATTGGATTGACTTCGTCAAGTTTTTTAGATGTCATAAGAGGATCACCTTCGTCAAGTTACCCATTCATCTGCTACTTTATCATTCAAACTAAACATATGAACTTGACATCTTACACCAGCCTTGTCACTAGCATTTAATACTCAACATGTGAATCTTCTATATATGTTGTAATTGAGTAAGTTTGCTGAACTCTTTTTTGTGATTTCCTGTTGCTTCCATGCATGTGAATCTGAATGTAGAACAGTTGATGTGTGGCATCCAACTCAAGCTTACACACACCATTTGGGTAGTGGCACACTTAGGAAGATGTGGAATGAGAAAACCTCTAAAATTATGTGTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGAGGTAGGGAATTGGGTGCGGTGTGGGACATCACTCATTTTTTGACCTTTGTTTGGTGTACATTCTCTGTCTCTATCTTATTCTGCAATTAAAGTCCTAGGTTGAAACATGAACTCAGGTCCCTCTTTATTAGCCTTGGTGGCACCTTTTGTAATAATTGTTCCAAGTACTTTCTGAGGTGTCTTTTGAGATTCAGAGTTTAAAATTTCTTGATCACAATGTTATTGTAATTTCTAGTTATTTGAGCACTCGAAAGAAAATTTATTTTGGACATCTTACATCATTCTTGAATTGAGTGTTTTTTTTTCCTCCTCCTGTATCTTAGTGCTTAGAAGGTGCCGAGGAAGAAAATGCCTCCAAAGATTCTGAGGAGACTGGGAGAAAAAGTGTAAGTAAAGAAGAAGCGGCTGACTCACTTGAAGGGCATCAGTCCAAGAAGGGTGTAAAGGAACCTTGCTTGGAAGATGAGGAGAAAATGGAAGACTCTCCAGTTATGGGCCTTCTCACAGGACGTAAAACAAAAAATGTTGAATCTGATGGAATCAAAGGAATCAAAGAAAAAGATGACAAAGATATTCCTAGTGAGAGTACAATTATGAAAGCTATTAGAAAAAGAATTTCTTATCTTAAAGCTAATTCCGAGTAAGTTATTATTATTTTCTCATTAGCGATCATCTTAATGCTGTGAATTTTCATACGTTTATGTCATATTAGTCTATGTCCCTTTTACAGTATTTTGATCCCTGTTGCTTTTTTAAAGTCCAAAATGGAGAACATCATAATCGAACCATAAAAAATTTCTTTTTAGAAATTCATAATGTATTGTTTTACTTCTGGTTCACAATAAACATTGTGGAATTGAAAAGAGTAGTTGTTTCAAGGATGGGTATCAGAATTGCTAACCAAGTACTCATAAAGTAATAGGACCTTGGATTATTACTGTATTTGTTTTAATGTTAGTTATTAGCGTGGATGCTCTTCCGGTCCTTCAATCCTTTTAATAGAAAACAAATAATAAAAAAAATGCATTTGTTCAGGAAAGTTACTATGGCTGGAGTTCGCCGCCTTCTGGAGGATGACCTTAAACTTACTAAAAATGCTCTCGACAGTTGCAAGAAGTTTATAAGCCAACAAATAGAGGAGGTGAGTCAATCCTGTTGAGTATCCATTTTTCTAGGTTATAAAGCCAAGCATACTGATAATTTTTCTTATGAATATTAAAATCAGATATTGACTTCTTGTGAAGCTGCTGGACAAATTTCTAATGAAAAGAAAGGTTCTCGTTTGAAAACTCCGAAAAAGGTAAGCAAAGAAAGCTCTCATTCTACTGAAGGGAGCAGTAGTGAGGAGGAAAACGATGAAGTAAAGCCTGGAAAGAAAAATGCAACTAAAGGAAGAATACCGAACTCTAATGAAACAAAAAAGCGGAAAAGGTCTACAAAGGAGACTGTCTCTGCCAAGAAGCAAAGCAAGCATGTCCAGCAGACATCAGAGGAGGATAGCGATGAAGGGGGTGAAAATGGCTCTGAAGATGGCCAGTCTGAATCATCCAATGAAAAACCTGTCAAGGTTAGATTTATTTTCTCCTCCCTTATATCTGATAGTTAATAAATTGACTTTCCGATGATTTTTTCAAACCTCACAGAAGGAAGTTTCAACTCCCGTCTATGGCAAGCGTGTGGAGCACTTGAAATCGGTTATCAAATCGTGTGGGATGAGGTTTTGTTTCTAGCCCTTACCATTTACATCCTTAACTTCTGAGTTGACGTGTAAAGAATTAAAATCAATAATCTCTCTTACAGTGTTCCTCCATCGATTTATAAGAAAGTCAAGCAGGCACCTGAAAGCAAACGTGAATCACAACTTATAAAGGAGTTGGAGGGGATACTATCCAGAGAGGGATTGTCTGCTAATCCCACTGAAAAAGGTGAACGAAAGGAATGGAGTGGGTACTATTATATGTGGGAATAAATAAAAAATAAGAAACTAGATTATAATCTAACTTCTTGCGCTTGGCTTCCTCGTAATTTCACTTGTTCAACGAAATAAGTTTCTTATAAGAAAAAGATATGGACAAGAAGTTAGATTTATGTGTAAATATGTTTTTTGGTGGGACTGTTTTGTGTTGTCAGCTCTACCCTGCGTGGCTTGCTATATTAGTAAACATACTAGTAGATAATAGCAGCAGTTTGTTGCTTTTCATTATTATTCCATTGTTGTTCACAATCAATATCATGCACATTTTCTGGTGATCAGAAATTAAGGAAGTCAAAAAGAAGAAGGAAAGGGCCAAAGAACTTGAAGGCATCGACTTAAGTAATATTGTCTCAAGTTCACGTAGAAGATCCACGACCAGTTATGTAGCACCACCTCCAAAACCGAAAATACCAGTTAAAACTGATGGTGATGATGTTGATGATACTGAAGAGGAGGAGGAGAACGATGAAGAAGAAGAAGACGACGATGAAGAAGAAGAGGAGGATGGCGAGGAAGAGGATAATGGTGATGTTGATGAAAGCCAAGGTGAAGAATTCAATGAGGGTAACAAACCATCAACTTTTTAA

mRNA sequence

ATTTTTCCTGTCAAGCAGAGTCATTCTTGGAAAGTCCCAACACACCTTCAGTCCAGAGCCCATAATTTCTTCCTTCGCACAAAAATCGGTGCGAGTCGAAGAACAGCAAAATGGCGGAGGAATTACAGGACAACGATGCTTCAAACGAAGAAGCCATGGATGTAGCTGTTGATATAGAGACGAAAATTCAGAACGCTATGCGCTCTCGCGTTTCTCACTTCAAGGAACAAGCCGACCCCAACCCTGTGGTGCCTGACAACCCCCTCTCCTCCGCCGACGACCGCCACAACAACCCTCCTCTAGACTGGGATGAACGGTTCTCTCTATCCGTGGAAGGAGTATTGGAAGACAAGATTTTTTTTGGAAGAGAAAGAAATAAGGAGCGACGGCAATGCTTAGAAGGTGCCGAGGAAGAAAATGCCTCCAAAGATTCTGAGGAGACTGGGAGAAAAAGTGTAAGTAAAGAAGAAGCGGCTGACTCACTTGAAGGGCATCAGTCCAAGAAGGGTGTAAAGGAACCTTGCTTGGAAGATGAGGAGAAAATGGAAGACTCTCCAGTTATGGGCCTTCTCACAGGACGTAAAACAAAAAATGTTGAATCTGATGGAATCAAAGGAATCAAAGAAAAAGATGACAAAGATATTCCTAGTGAGAGTACAATTATGAAAGCTATTAGAAAAAGAATTTCTTATCTTAAAGCTAATTCCGAGAAAGTTACTATGGCTGGAGTTCGCCGCCTTCTGGAGGATGACCTTAAACTTACTAAAAATGCTCTCGACAGTTGCAAGAAGTTTATAAGCCAACAAATAGAGGAGATATTGACTTCTTGTGAAGCTGCTGGACAAATTTCTAATGAAAAGAAAGGTTCTCGTTTGAAAACTCCGAAAAAGGTAAGCAAAGAAAGCTCTCATTCTACTGAAGGGAGCAGTAGTGAGGAGGAAAACGATGAAGTAAAGCCTGGAAAGAAAAATGCAACTAAAGGAAGAATACCGAACTCTAATGAAACAAAAAAGCGGAAAAGGTCTACAAAGGAGACTGTCTCTGCCAAGAAGCAAAGCAAGCATGTCCAGCAGACATCAGAGGAGGATAGCGATGAAGGGGGTGAAAATGGCTCTGAAGATGGCCAGTCTGAATCATCCAATGAAAAACCTGTCAAGAAGGAAGTTTCAACTCCCGTCTATGGCAAGCGTGTGGAGCACTTGAAATCGGTTATCAAATCGTGTGGGATGAGTGTTCCTCCATCGATTTATAAGAAAGTCAAGCAGGCACCTGAAAGCAAACGTGAATCACAACTTATAAAGGAGTTGGAGGGGATACTATCCAGAGAGGGATTGTCTGCTAATCCCACTGAAAAAGAAATTAAGGAAGTCAAAAAGAAGAAGGAAAGGGCCAAAGAACTTGAAGGCATCGACTTAAGTAATATTGTCTCAAGTTCACGTAGAAGATCCACGACCAGTTATGTAGCACCACCTCCAAAACCGAAAATACCAGTTAAAACTGATGGTGATGATGTTGATGATACTGAAGAGGAGGAGGAGAACGATGAAGAAGAAGAAGACGACGATGAAGAAGAAGAGGAGGATGGCGAGGAAGAGGATAATGGTGATGTTGATGAAAGCCAAGGTGAAGAATTCAATGAGGGTAACAAACCATCAACTTTTTAA

Coding sequence (CDS)

ATGGCGGAGGAATTACAGGACAACGATGCTTCAAACGAAGAAGCCATGGATGTAGCTGTTGATATAGAGACGAAAATTCAGAACGCTATGCGCTCTCGCGTTTCTCACTTCAAGGAACAAGCCGACCCCAACCCTGTGGTGCCTGACAACCCCCTCTCCTCCGCCGACGACCGCCACAACAACCCTCCTCTAGACTGGGATGAACGGTTCTCTCTATCCGTGGAAGGAGTATTGGAAGACAAGATTTTTTTTGGAAGAGAAAGAAATAAGGAGCGACGGCAATGCTTAGAAGGTGCCGAGGAAGAAAATGCCTCCAAAGATTCTGAGGAGACTGGGAGAAAAAGTGTAAGTAAAGAAGAAGCGGCTGACTCACTTGAAGGGCATCAGTCCAAGAAGGGTGTAAAGGAACCTTGCTTGGAAGATGAGGAGAAAATGGAAGACTCTCCAGTTATGGGCCTTCTCACAGGACGTAAAACAAAAAATGTTGAATCTGATGGAATCAAAGGAATCAAAGAAAAAGATGACAAAGATATTCCTAGTGAGAGTACAATTATGAAAGCTATTAGAAAAAGAATTTCTTATCTTAAAGCTAATTCCGAGAAAGTTACTATGGCTGGAGTTCGCCGCCTTCTGGAGGATGACCTTAAACTTACTAAAAATGCTCTCGACAGTTGCAAGAAGTTTATAAGCCAACAAATAGAGGAGATATTGACTTCTTGTGAAGCTGCTGGACAAATTTCTAATGAAAAGAAAGGTTCTCGTTTGAAAACTCCGAAAAAGGTAAGCAAAGAAAGCTCTCATTCTACTGAAGGGAGCAGTAGTGAGGAGGAAAACGATGAAGTAAAGCCTGGAAAGAAAAATGCAACTAAAGGAAGAATACCGAACTCTAATGAAACAAAAAAGCGGAAAAGGTCTACAAAGGAGACTGTCTCTGCCAAGAAGCAAAGCAAGCATGTCCAGCAGACATCAGAGGAGGATAGCGATGAAGGGGGTGAAAATGGCTCTGAAGATGGCCAGTCTGAATCATCCAATGAAAAACCTGTCAAGAAGGAAGTTTCAACTCCCGTCTATGGCAAGCGTGTGGAGCACTTGAAATCGGTTATCAAATCGTGTGGGATGAGTGTTCCTCCATCGATTTATAAGAAAGTCAAGCAGGCACCTGAAAGCAAACGTGAATCACAACTTATAAAGGAGTTGGAGGGGATACTATCCAGAGAGGGATTGTCTGCTAATCCCACTGAAAAAGAAATTAAGGAAGTCAAAAAGAAGAAGGAAAGGGCCAAAGAACTTGAAGGCATCGACTTAAGTAATATTGTCTCAAGTTCACGTAGAAGATCCACGACCAGTTATGTAGCACCACCTCCAAAACCGAAAATACCAGTTAAAACTGATGGTGATGATGTTGATGATACTGAAGAGGAGGAGGAGAACGATGAAGAAGAAGAAGACGACGATGAAGAAGAAGAGGAGGATGGCGAGGAAGAGGATAATGGTGATGTTGATGAAAGCCAAGGTGAAGAATTCAATGAGGGTAACAAACCATCAACTTTTTAA

Protein sequence

MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHNNPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEEAADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPSESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSCEAAGQISNEKKGSRLKTPKKVSKESSHSTEGSSSEEENDEVKPGKKNATKGRIPNSNETKKRKRSTKETVSAKKQSKHVQQTSEEDSDEGGENGSEDGQSESSNEKPVKKEVSTPVYGKRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIKEVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEENDEEEEDDDEEEEEDGEEEDNGDVDESQGEEFNEGNKPSTF

Homology

[Close]

BLAST of Lsi08G004240 vs. ExPASy TrEMBL
Match: A0A6J1FFY5 (DNA ligase 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445354 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 8.8e-189
Identity = 413/513 (80.51%), Postives = 439/513 (85.58%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQDNDA NEEAMDV V IETKIQNAM SRVSHFKEQAD         L   D    
Sbjct: 1   MAEELQDNDAPNEEAMDVDVGIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCME 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
              LD  +R+   ++  L               +CLEG EE+NASK SEETG KSVS+ E
Sbjct: 61  TYALDVHKRY---IKQCLV--------------KCLEGVEEDNASKSSEETGGKSVSRGE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+SLEGHQSKKG KEPCLEDEEKMEDSPVMGLL G KTKNVESD IKGIK+KDDKDIP+
Sbjct: 121 AAESLEGHQSKKGAKEPCLEDEEKMEDSPVMGLLAGHKTKNVESDKIKGIKDKDDKDIPT 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ESTI KAIRKR  YLKANSEKVTMAGVRRLLEDDLKLTK ALD CKKFISQQ+EEIL SC
Sbjct: 181 ESTIKKAIRKRTPYLKANSEKVTMAGVRRLLEDDLKLTKYALDGCKKFISQQVEEILNSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTE-GSSSEEENDEVKPGKKNATKGRIPNSNET 300
           EAA ++SNEKKGSRLKTPKKVSKESSHSTE GSSSEEE+DEVKP KKN TKGRI NSNET
Sbjct: 241 EAAEEVSNEKKGSRLKTPKKVSKESSHSTEGGSSSEEESDEVKPVKKNVTKGRISNSNET 300

Query: 301 KKRKRSTKETVSAKKQSKHVQQTSEEDSD-EGGENGSEDGQSESSNEKPVKKEVSTPVYG 360
           KKRKRSTKE VSAKKQ KHVQ TSEEDSD EGGEN SEDG SESSNEKPVKKEVSTPVYG
Sbjct: 301 KKRKRSTKEIVSAKKQRKHVQHTSEEDSDEEGGENVSEDGHSESSNEKPVKKEVSTPVYG 360

Query: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420
           KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK
Sbjct: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420

Query: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEEND 480
           +VKKKKERAKELEGIDLSNIVSSSRRRST+SYVAPPPKPKIPVKT+GDDVDDT++EEE D
Sbjct: 421 DVKKKKERAKELEGIDLSNIVSSSRRRSTSSYVAPPPKPKIPVKTEGDDVDDTDDEEEED 480

Query: 481 EEEEDDDEEEEEDGEEEDNGDVDESQG-EEFNE 511
           ++++DD++ EEED +EEDNGDVDESQG EEFNE
Sbjct: 481 DDDDDDEDGEEED-DEEDNGDVDESQGEEEFNE 495

[Close]

BLAST of Lsi08G004240 vs. ExPASy TrEMBL
Match: A0A6J1FGV2 (glutamic acid-rich protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445354 PE=4 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 6.3e-187
Identity = 407/508 (80.12%), Postives = 434/508 (85.43%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQDNDA NEEAMDV V IETKIQNAM SRVSHFKEQAD         L   D    
Sbjct: 1   MAEELQDNDAPNEEAMDVDVGIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCME 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
              LD  +R+   ++  L               +CLEG EE+NASK SEETG KSVS+ E
Sbjct: 61  TYALDVHKRY---IKQCLV--------------KCLEGVEEDNASKSSEETGGKSVSRGE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+SLEGHQSKKG KEPCLEDEEKMEDSPVMGLL G KTKNVESD IKGIK+KDDKDIP+
Sbjct: 121 AAESLEGHQSKKGAKEPCLEDEEKMEDSPVMGLLAGHKTKNVESDKIKGIKDKDDKDIPT 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ESTI KAIRKR  YLKANSEKVTMAGVRRLLEDDLKLTK ALD CKKFISQQ+EEIL SC
Sbjct: 181 ESTIKKAIRKRTPYLKANSEKVTMAGVRRLLEDDLKLTKYALDGCKKFISQQVEEILNSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTE-GSSSEEENDEVKPGKKNATKGRIPNSNET 300
           EAA ++SNEKKGSRLKTPKKVSKESSHSTE GSSSEEE+DEVKP KKN TKGRI NSNET
Sbjct: 241 EAAEEVSNEKKGSRLKTPKKVSKESSHSTEGGSSSEEESDEVKPVKKNVTKGRISNSNET 300

Query: 301 KKRKRSTKETVSAKKQSKHVQQTSEEDSD-EGGENGSEDGQSESSNEKPVKKEVSTPVYG 360
           KKRKRSTKE VSAKKQ KHVQ TSEEDSD EGGEN SEDG SESSNEKPVKKEVSTPVYG
Sbjct: 301 KKRKRSTKEIVSAKKQRKHVQHTSEEDSDEEGGENVSEDGHSESSNEKPVKKEVSTPVYG 360

Query: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420
           KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK
Sbjct: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420

Query: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEEND 480
           +VKKKKERAKELEGIDLSNIVSSSRRRST+SYVAPPPKPKIPVKT+GDDVDDT++EEE D
Sbjct: 421 DVKKKKERAKELEGIDLSNIVSSSRRRSTSSYVAPPPKPKIPVKTEGDDVDDTDDEEEED 480

Query: 481 EEEEDDDEEEEEDGEEEDNGDVDESQGE 507
           ++++DD++ EEED +EEDNGDVDESQ +
Sbjct: 481 DDDDDDEDGEEED-DEEDNGDVDESQDD 490

[Close]

BLAST of Lsi08G004240 vs. ExPASy TrEMBL
Match: A0A0A0LIS6 (CHZ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G232480 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 7.7e-185
Identity = 406/512 (79.30%), Postives = 427/512 (83.40%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQ ND   EE MDVAV IETKI NAMRSR+SHFKEQAD         L   D    
Sbjct: 1   MAEELQGNDTPKEEPMDVAVGIETKIHNAMRSRISHFKEQADSLTFEGVRRLLEKDLCME 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
              LD  +R+   V+  L               +CLE   E+N SKDSE TGRKSV+KEE
Sbjct: 61  TYTLDVHKRY---VKQCLV--------------KCLEADLEDNVSKDSELTGRKSVNKEE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           A +S EGHQSKKG KEPCLEDEEKMEDSPVMGLLTGR TKNVESDGIKGIK KDDKD+PS
Sbjct: 121 APESPEGHQSKKGAKEPCLEDEEKMEDSPVMGLLTGRSTKNVESDGIKGIKGKDDKDVPS 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ESTIMKAIRKR SYLKANSEKVTMAGVRRLLEDDLKLTKN LDSCKKFISQQ+EEILTSC
Sbjct: 181 ESTIMKAIRKRTSYLKANSEKVTMAGVRRLLEDDLKLTKNVLDSCKKFISQQVEEILTSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTEGSSSEEENDEVKPGKKNATKGRIPNSNETK 300
           EAA Q+SN      LK+PKK+SKESS+STEGSSSEEENDEV PGK NATKGRIP+SNETK
Sbjct: 241 EAAEQVSN------LKSPKKISKESSYSTEGSSSEEENDEVNPGKTNATKGRIPDSNETK 300

Query: 301 KRKRSTKETVSAKKQSKHVQQTSEEDSDEGGENGSEDGQSESSNEKPVKKEV--STPVYG 360
           KRKRSTK+TVSA+KQSKHVQ TS+EDSDEGG N SEDG+S SSNEKPVKKEV  STPVYG
Sbjct: 301 KRKRSTKKTVSAQKQSKHVQDTSDEDSDEGGGNVSEDGRSGSSNEKPVKKEVSSSTPVYG 360

Query: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420
           KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSAN TEKEIK
Sbjct: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANSTEKEIK 420

Query: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEEND 480
           EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDD D    EEE+D
Sbjct: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDAD----EEEDD 480

Query: 481 EEEEDDDEEEEEDGEEEDNGDVDESQGEEFNE 511
           EEE    +EEEEDGEEEDNGDVDESQGEEFNE
Sbjct: 481 EEE----DEEEEDGEEEDNGDVDESQGEEFNE 481

[Close]

BLAST of Lsi08G004240 vs. ExPASy TrEMBL
Match: A0A6J1JTY1 (glutamic acid-rich protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489718 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 1.1e-183
Identity = 405/513 (78.95%), Postives = 430/513 (83.82%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQD DA NEEAMDV V IETKIQNAM SRVSHFKEQAD         L   D    
Sbjct: 1   MAEELQDTDAPNEEAMDVDVGIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLENDLCME 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
              LD  +R+   ++  L               +CLEG EE+NASK SEETG KSVS+ E
Sbjct: 61  TYALDVHKRY---IKQCLV--------------KCLEGVEEDNASKSSEETGGKSVSRGE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+SLEGHQSKKG KEPCLEDEEKMEDSPVMGLL G KTKN ESD +KGIK+KDDKDIP+
Sbjct: 121 AAESLEGHQSKKGAKEPCLEDEEKMEDSPVMGLLAGHKTKNAESDKVKGIKDKDDKDIPT 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ESTI KAIRKR  YLKANSEKVTMAGVRRLLEDDLKLTK ALD CKKFISQQ+EEIL SC
Sbjct: 181 ESTIKKAIRKRTPYLKANSEKVTMAGVRRLLEDDLKLTKYALDGCKKFISQQVEEILNSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTE-GSSSEEENDEVKPGKKNATKGRIPNSNET 300
           EAA Q+SNEKKGSRLKTPKKVSKESSHSTE GSSSEEE+DEVKP KKN TKG I NSNE 
Sbjct: 241 EAAEQVSNEKKGSRLKTPKKVSKESSHSTEGGSSSEEESDEVKPVKKNVTKGIISNSNEM 300

Query: 301 KKRKRSTKETVSAKKQSKHVQQTSEEDSDE-GGENGSEDGQSESSNEKPVKKEVSTPVYG 360
           KKRKRSTKE VSAKKQ KHV  T EEDSDE GGEN SEDG SESSNEKPVKKEVSTPVYG
Sbjct: 301 KKRKRSTKEIVSAKKQRKHVLHTLEEDSDEDGGENVSEDGHSESSNEKPVKKEVSTPVYG 360

Query: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420
           KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLS NPTEKEIK
Sbjct: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSVNPTEKEIK 420

Query: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEEND 480
           +VKKKKERAKELEGIDLSNIVSSSRRRST+SY APPPKPKIPVKT+GDDVDDT++EEE +
Sbjct: 421 DVKKKKERAKELEGIDLSNIVSSSRRRSTSSYAAPPPKPKIPVKTEGDDVDDTDDEEEEE 480

Query: 481 EEEEDDDEEEEEDGEEEDNGDVDESQG-EEFNE 511
           ++++DDD EEE+D  EEDNGDVDESQG EEFNE
Sbjct: 481 DDDDDDDGEEEDD--EEDNGDVDESQGEEEFNE 494

[Close]

BLAST of Lsi08G004240 vs. ExPASy TrEMBL
Match: A0A6J1K3E3 (glutamic acid-rich protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489718 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 8.0e-182
Identity = 399/508 (78.54%), Postives = 425/508 (83.66%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQD DA NEEAMDV V IETKIQNAM SRVSHFKEQAD         L   D    
Sbjct: 1   MAEELQDTDAPNEEAMDVDVGIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLENDLCME 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
              LD  +R+   ++  L               +CLEG EE+NASK SEETG KSVS+ E
Sbjct: 61  TYALDVHKRY---IKQCLV--------------KCLEGVEEDNASKSSEETGGKSVSRGE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+SLEGHQSKKG KEPCLEDEEKMEDSPVMGLL G KTKN ESD +KGIK+KDDKDIP+
Sbjct: 121 AAESLEGHQSKKGAKEPCLEDEEKMEDSPVMGLLAGHKTKNAESDKVKGIKDKDDKDIPT 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ESTI KAIRKR  YLKANSEKVTMAGVRRLLEDDLKLTK ALD CKKFISQQ+EEIL SC
Sbjct: 181 ESTIKKAIRKRTPYLKANSEKVTMAGVRRLLEDDLKLTKYALDGCKKFISQQVEEILNSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTE-GSSSEEENDEVKPGKKNATKGRIPNSNET 300
           EAA Q+SNEKKGSRLKTPKKVSKESSHSTE GSSSEEE+DEVKP KKN TKG I NSNE 
Sbjct: 241 EAAEQVSNEKKGSRLKTPKKVSKESSHSTEGGSSSEEESDEVKPVKKNVTKGIISNSNEM 300

Query: 301 KKRKRSTKETVSAKKQSKHVQQTSEEDSDE-GGENGSEDGQSESSNEKPVKKEVSTPVYG 360
           KKRKRSTKE VSAKKQ KHV  T EEDSDE GGEN SEDG SESSNEKPVKKEVSTPVYG
Sbjct: 301 KKRKRSTKEIVSAKKQRKHVLHTLEEDSDEDGGENVSEDGHSESSNEKPVKKEVSTPVYG 360

Query: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420
           KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLS NPTEKEIK
Sbjct: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSVNPTEKEIK 420

Query: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEEND 480
           +VKKKKERAKELEGIDLSNIVSSSRRRST+SY APPPKPKIPVKT+GDDVDDT++EEE +
Sbjct: 421 DVKKKKERAKELEGIDLSNIVSSSRRRSTSSYAAPPPKPKIPVKTEGDDVDDTDDEEEEE 480

Query: 481 EEEEDDDEEEEEDGEEEDNGDVDESQGE 507
           ++++DDD EEE+D  EEDNGDVDESQ +
Sbjct: 481 DDDDDDDGEEEDD--EEDNGDVDESQDD 489

[Close]

BLAST of Lsi08G004240 vs. NCBI nr
Match: XP_038884709.1 (glutamic acid-rich protein isoform X1 [Benincasa hispida])

HSP 1 Score: 681.4 bits (1757), Expect = 6.1e-192
Identity = 418/516 (81.01%), Postives = 439/516 (85.08%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQD DASN++AMDVAVDIETKI NAMRSRVS+FKE+AD         L   D    
Sbjct: 1   MAEELQDKDASNDKAMDVAVDIETKIYNAMRSRVSYFKEEADSLTFEGVRRLLEKD---- 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
                  E ++L V   L  +            +C E   E+N SK SEETGRKSV+KEE
Sbjct: 61  ----LCMEMYTLDVHKRLVKQCLV---------KCFEADWEDNVSKKSEETGRKSVNKEE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+ LEGHQSKKGVKEPC EDEEKMEDSPVMGLL  R TKNVESDGIKGIK+KDDKDIPS
Sbjct: 121 AAEPLEGHQSKKGVKEPCSEDEEKMEDSPVMGLLIPRNTKNVESDGIKGIKDKDDKDIPS 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ES I KAIRKR SYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQ+EEILTSC
Sbjct: 181 ESIIAKAIRKRTSYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQVEEILTSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTEGSS----SEEENDEVKPGKKNATKGRIPNS 300
           EAA Q+SNEK   RLKTPKKVSKESSHSTEGSS    SEEENDEVKPGKKNATKGRIPNS
Sbjct: 241 EAAEQVSNEK---RLKTPKKVSKESSHSTEGSSSEEDSEEENDEVKPGKKNATKGRIPNS 300

Query: 301 NETKKRKRSTKETVSAKKQSKHVQQTSEEDSDEGGENGSEDGQSESSNEKPVKKEVSTPV 360
           NETKKRKRSTKET+SAKKQSKHVQ TSEED+DEGGEN SEDGQSESS+E+PVKKEVSTPV
Sbjct: 301 NETKKRKRSTKETLSAKKQSKHVQHTSEEDNDEGGENVSEDGQSESSHERPVKKEVSTPV 360

Query: 361 YGKRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKE 420
           YGK VEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKE
Sbjct: 361 YGKHVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKE 420

Query: 421 IKEVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKT--DGDDVDDTEEE 480
           IKEVKKKKERAKELEGIDLSNIVSSSRRRS TSY  PPPKPKIPVKT  DGDD DDTEEE
Sbjct: 421 IKEVKKKKERAKELEGIDLSNIVSSSRRRSATSYATPPPKPKIPVKTDGDGDDGDDTEEE 480

Query: 481 EENDEEEEDDDEEEEEDGEEEDNGDVDESQGEEFNE 511
           EE DE+EEDDD+EEEEDGEEEDNG+VD SQGEEFNE
Sbjct: 481 EEEDEDEEDDDDEEEEDGEEEDNGNVDGSQGEEFNE 496

[Close]

BLAST of Lsi08G004240 vs. NCBI nr
Match: XP_023551365.1 (glutamic acid-rich protein-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 670.6 bits (1729), Expect = 1.1e-188
Identity = 414/513 (80.70%), Postives = 437/513 (85.19%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQDNDA NEEAMDV V IETKIQNAM SRVSHFKEQAD         L   D    
Sbjct: 1   MAEELQDNDAPNEEAMDVDVGIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCME 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
              LD  +R+   ++  L               +CLEG EE+N SK SEETG KSVS+ E
Sbjct: 61  TYALDVHKRY---IKQCLV--------------KCLEGVEEDNVSKSSEETGGKSVSRGE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+SLEGHQSKKG KEPCLEDEEKMEDSPVMGLL G KTKNVESD +KGIK+KDDKDIP+
Sbjct: 121 AAESLEGHQSKKGAKEPCLEDEEKMEDSPVMGLLAGHKTKNVESDKVKGIKDKDDKDIPT 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           E+TI KAIRKR  YLKANSEKVTMAGVRRLLEDDLKLTK ALD CKKFISQQ+EEIL SC
Sbjct: 181 ETTIKKAIRKRTPYLKANSEKVTMAGVRRLLEDDLKLTKYALDGCKKFISQQVEEILNSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTE-GSSSEEENDEVKPGKKNATKGRIPNSNET 300
           EAA Q+SNEKKGSRLKTPKKVSKESSHSTE GSSSEEE+DEVKP KKN TKGRI NSNET
Sbjct: 241 EAAEQVSNEKKGSRLKTPKKVSKESSHSTEGGSSSEEESDEVKPVKKNVTKGRISNSNET 300

Query: 301 KKRKRSTKETVSAKKQSKHVQQTSEEDSD-EGGENGSEDGQSESSNEKPVKKEVSTPVYG 360
           KKRKRSTKE VSAKKQ KHVQ TSEEDSD EGGEN SEDG SESSNEKPVKKEVSTPVYG
Sbjct: 301 KKRKRSTKEIVSAKKQRKHVQHTSEEDSDEEGGENVSEDGHSESSNEKPVKKEVSTPVYG 360

Query: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420
           KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK
Sbjct: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420

Query: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEEND 480
           +VKKKKERAKELEGIDLSNIVSSSRRRST+SYVAPPPKPKIPVKT+GDDVDDT+EEEE  
Sbjct: 421 DVKKKKERAKELEGIDLSNIVSSSRRRSTSSYVAPPPKPKIPVKTEGDDVDDTDEEEE-- 480

Query: 481 EEEEDDDEEEEEDGEEEDNGDVDESQG-EEFNE 511
           EEE+DDDE+ EE+ +EEDNGDVDESQG EEFNE
Sbjct: 481 EEEDDDDEDGEEEDDEEDNGDVDESQGEEEFNE 494

[Close]

BLAST of Lsi08G004240 vs. NCBI nr
Match: XP_038884710.1 (glutamic acid-rich protein isoform X2 [Benincasa hispida])

HSP 1 Score: 670.6 bits (1729), Expect = 1.1e-188
Identity = 412/512 (80.47%), Postives = 434/512 (84.77%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQD DASN++AMDVAVDIETKI NAMRSRVS+FKE+AD         L   D    
Sbjct: 1   MAEELQDKDASNDKAMDVAVDIETKIYNAMRSRVSYFKEEADSLTFEGVRRLLEKD---- 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
                  E ++L V   L  +            +C E   E+N SK SEETGRKSV+KEE
Sbjct: 61  ----LCMEMYTLDVHKRLVKQCLV---------KCFEADWEDNVSKKSEETGRKSVNKEE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+ LEGHQSKKGVKEPC EDEEKMEDSPVMGLL  R TKNVESDGIKGIK+KDDKDIPS
Sbjct: 121 AAEPLEGHQSKKGVKEPCSEDEEKMEDSPVMGLLIPRNTKNVESDGIKGIKDKDDKDIPS 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ES I KAIRKR SYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQ+EEILTSC
Sbjct: 181 ESIIAKAIRKRTSYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQVEEILTSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTEGSS----SEEENDEVKPGKKNATKGRIPNS 300
           EAA Q+SNEK   RLKTPKKVSKESSHSTEGSS    SEEENDEVKPGKKNATKGRIPNS
Sbjct: 241 EAAEQVSNEK---RLKTPKKVSKESSHSTEGSSSEEDSEEENDEVKPGKKNATKGRIPNS 300

Query: 301 NETKKRKRSTKETVSAKKQSKHVQQTSEEDSDEGGENGSEDGQSESSNEKPVKKEVSTPV 360
           NETKKRKRSTKET+SAKKQSKHVQ TSEED+DEGGEN SEDGQSESS+E+PVKKEVSTPV
Sbjct: 301 NETKKRKRSTKETLSAKKQSKHVQHTSEEDNDEGGENVSEDGQSESSHERPVKKEVSTPV 360

Query: 361 YGKRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKE 420
           YGK VEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKE
Sbjct: 361 YGKHVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKE 420

Query: 421 IKEVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKT--DGDDVDDTEEE 480
           IKEVKKKKERAKELEGIDLSNIVSSSRRRS TSY  PPPKPKIPVKT  DGDD DDTEEE
Sbjct: 421 IKEVKKKKERAKELEGIDLSNIVSSSRRRSATSYATPPPKPKIPVKTDGDGDDGDDTEEE 480

Query: 481 EENDEEEEDDDEEEEEDGEEEDNGDVDESQGE 507
           EE DE+EEDDD+EEEEDGEEEDNG+VD SQ +
Sbjct: 481 EEEDEDEEDDDDEEEEDGEEEDNGNVDGSQDD 492

[Close]

BLAST of Lsi08G004240 vs. NCBI nr
Match: XP_022939456.1 (DNA ligase 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 669.8 bits (1727), Expect = 1.8e-188
Identity = 413/513 (80.51%), Postives = 439/513 (85.58%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQDNDA NEEAMDV V IETKIQNAM SRVSHFKEQAD         L   D    
Sbjct: 1   MAEELQDNDAPNEEAMDVDVGIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCME 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
              LD  +R+   ++  L               +CLEG EE+NASK SEETG KSVS+ E
Sbjct: 61  TYALDVHKRY---IKQCLV--------------KCLEGVEEDNASKSSEETGGKSVSRGE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+SLEGHQSKKG KEPCLEDEEKMEDSPVMGLL G KTKNVESD IKGIK+KDDKDIP+
Sbjct: 121 AAESLEGHQSKKGAKEPCLEDEEKMEDSPVMGLLAGHKTKNVESDKIKGIKDKDDKDIPT 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ESTI KAIRKR  YLKANSEKVTMAGVRRLLEDDLKLTK ALD CKKFISQQ+EEIL SC
Sbjct: 181 ESTIKKAIRKRTPYLKANSEKVTMAGVRRLLEDDLKLTKYALDGCKKFISQQVEEILNSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTE-GSSSEEENDEVKPGKKNATKGRIPNSNET 300
           EAA ++SNEKKGSRLKTPKKVSKESSHSTE GSSSEEE+DEVKP KKN TKGRI NSNET
Sbjct: 241 EAAEEVSNEKKGSRLKTPKKVSKESSHSTEGGSSSEEESDEVKPVKKNVTKGRISNSNET 300

Query: 301 KKRKRSTKETVSAKKQSKHVQQTSEEDSD-EGGENGSEDGQSESSNEKPVKKEVSTPVYG 360
           KKRKRSTKE VSAKKQ KHVQ TSEEDSD EGGEN SEDG SESSNEKPVKKEVSTPVYG
Sbjct: 301 KKRKRSTKEIVSAKKQRKHVQHTSEEDSDEEGGENVSEDGHSESSNEKPVKKEVSTPVYG 360

Query: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420
           KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK
Sbjct: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420

Query: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEEND 480
           +VKKKKERAKELEGIDLSNIVSSSRRRST+SYVAPPPKPKIPVKT+GDDVDDT++EEE D
Sbjct: 421 DVKKKKERAKELEGIDLSNIVSSSRRRSTSSYVAPPPKPKIPVKTEGDDVDDTDDEEEED 480

Query: 481 EEEEDDDEEEEEDGEEEDNGDVDESQG-EEFNE 511
           ++++DD++ EEED +EEDNGDVDESQG EEFNE
Sbjct: 481 DDDDDDEDGEEED-DEEDNGDVDESQGEEEFNE 495

[Close]

BLAST of Lsi08G004240 vs. NCBI nr
Match: KAG7016498.1 (hypothetical protein SDJN02_21607 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 669.5 bits (1726), Expect = 2.4e-188
Identity = 412/515 (80.00%), Postives = 441/515 (85.63%), Query Frame = 0


Query: 1   MAEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHN 60
           MAEELQDNDA NEEAMDV V IETKIQNAM SRVSHFKEQAD         L   D    
Sbjct: 1   MAEELQDNDAPNEEAMDVDVGIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCME 60

Query: 61  NPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRKSVSKEE 120
              LD  +R+   ++  L               +CLEG EE+NASK SEETG KSVS+ E
Sbjct: 61  TYALDVHKRY---IKQCLV--------------KCLEGVEEDNASKSSEETGGKSVSRGE 120

Query: 121 AADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIPS 180
           AA+SLEGHQSKKG KEPCLEDEEKMEDSPVMGLL G KTKNVESD IKGIK+KDDKDIP+
Sbjct: 121 AAESLEGHQSKKGAKEPCLEDEEKMEDSPVMGLLAGHKTKNVESDKIKGIKDKDDKDIPT 180

Query: 181 ESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEILTSC 240
           ESTI KAIRKR  YLKANSEKVTMAGVRRLLEDDLKLTK ALD CKKFISQQ+EEIL SC
Sbjct: 181 ESTIKKAIRKRTPYLKANSEKVTMAGVRRLLEDDLKLTKYALDGCKKFISQQVEEILNSC 240

Query: 241 EAAGQISNEKKGSRLKTPKKVSKESSHSTE-GSSSEEENDEVKPGKKNATKGRIPNSNET 300
           EAA Q+SNEKKGSRLKTPKKVSKESSHSTE GSSSEEE+DEVKP KKN TKGRI NSNET
Sbjct: 241 EAAEQVSNEKKGSRLKTPKKVSKESSHSTEGGSSSEEESDEVKPVKKNVTKGRISNSNET 300

Query: 301 KKRKRSTKETVSAKKQSKHVQQTSEEDSD-EGGENGSEDGQSESSNEKPVKKEVSTPVYG 360
           KKRKRSTKE VSAKKQ KHVQ TSEEDSD EGGEN SEDG SESSNEKPVKKEVSTPVYG
Sbjct: 301 KKRKRSTKEIVSAKKQRKHVQHTSEEDSDEEGGENVSEDGHSESSNEKPVKKEVSTPVYG 360

Query: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420
           KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK
Sbjct: 361 KRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPTEKEIK 420

Query: 421 EVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPVKTDGDDVDDTEEEEEND 480
           +VKKKKERAKELEGIDLSNIVSSSRRRST+SYVAPPPKPKIPVKT+GDDVDDT++E+++D
Sbjct: 421 DVKKKKERAKELEGIDLSNIVSSSRRRSTSSYVAPPPKPKIPVKTEGDDVDDTDDEDDDD 480

Query: 481 EEEEDDDEEE--EEDGEEEDNGDVDESQG-EEFNE 511
           ++++DDD++E  EE+ +EEDNGDVDESQG EEFNE
Sbjct: 481 DDDDDDDDDEDGEEEDDEEDNGDVDESQGEEEFNE 498

[Close]

BLAST of Lsi08G004240 vs. TAIR 10
Match: AT4G08310.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44780.2); Has 53711 Blast hits to 33687 proteins in 1618 species: Archae - 142; Bacteria - 4400; Metazoa - 24303; Fungi - 6688; Plants - 2484; Viruses - 449; Other Eukaryotes - 15245 (source: NCBI BLink). )

HSP 1 Score: 268.1 bits (684), Expect = 1.5e-71
Identity = 231/526 (43.92%), Postives = 311/526 (59.13%), Query Frame = 0


Query: 5   LQDNDASNEEAMDVA----------------VDIETKIQNAMRSRVSHFKEQADPNPVVP 64
           + D D++   AM+++                 DIE++I  AM+SRV++ +++AD      
Sbjct: 1   MSDGDSTTTSAMEISGDKIDLKDGEATTPPKTDIESQILAAMQSRVTYLRDKADNFTFEG 60

Query: 65  DNPLSSADDRHNNPPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDS 124
              L   D +     LD  + F                   +   QCL GAE +  S++S
Sbjct: 61  VRRLLEEDLKLEKHALDVHKSFV-----------------KQHLVQCLAGAENDETSENS 120

Query: 125 EETGRKS--VSKEEAADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDG 184
            ET +K      +EAA+  + H +KK  KE    D+EK +DSPVMGLLT   T    ++ 
Sbjct: 121 LETEKKDDVTPVKEAAELSKEHTTKKDGKEDMTGDDEKTKDSPVMGLLTEENTSKSVAEQ 180

Query: 185 IKGIKEKDDKDIPSESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCK 244
            K     +DK++  +S I KA+RKR SY+KANSEK+TM  +RRLLE DLKL K +LD  K
Sbjct: 181 TK----DEDKEV-LQSDIKKALRKRSSYIKANSEKITMGLLRRLLEQDLKLEKYSLDPYK 240

Query: 245 KFISQQIEEILTSCEAAGQISNEKKGSRLKTPKKVSKESSHSTE----GSSSEEENDEVK 304
           KFI+ +++EIL + EA    +  ++    K  K    ++S S E        EEE+ EV 
Sbjct: 241 KFINGELDEILQAHEATQSSTKAQRKPVSKKVKSTPAKNSDSEEMFDSDGEDEEEDKEVA 300

Query: 305 PGKKNATKGRIPNSNETKKRKRSTKETVSAKKQSKHVQQTSEEDSDEGGENGSEDGQSES 364
             KK A K ++  S  T KRKR  ++  SAKK     Q  S+ DSD         G+   
Sbjct: 301 VKKKMAEKRKLSKSEGTGKRKREKEKPASAKKTK---QTDSQSDSDA--------GEKAP 360

Query: 365 SNEKPVKK-EVSTPVYGKRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEG 424
           S+EK VKK E  T  YGKRVEHLKS+IKSCGMS+ PS+Y+K KQAPE KRE  LIKEL+ 
Sbjct: 361 SSEKSVKKPETPTTGYGKRVEHLKSIIKSCGMSISPSVYRKAKQAPEEKREEILIKELKE 420

Query: 425 ILSREGLSANPTEKEIKEVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPV 484
           +L++EGLSANP+EKEIKEVKK+KER KELEGID SNIVSSSRRRS+ S+V PPPKP    
Sbjct: 421 LLAKEGLSANPSEKEIKEVKKRKERTKELEGIDTSNIVSSSRRRSSASFV-PPPKPIKAE 480

Query: 485 KTDGDDVDDTEEEEENDEEEEDDDEEEEED-GEEEDNGDVDESQGE 507
           +++ DD +D+E EE+ DEE   ++EEEEED G  ED G+  +++GE
Sbjct: 481 ESESDDSEDSENEEDEDEEVVVEEEEEEEDEGGSEDGGEGSQNEGE 492

[Close]

BLAST of Lsi08G004240 vs. TAIR 10
Match: AT1G44780.2 (INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 222.2 bits (565), Expect = 9.4e-58
Identity = 207/510 (40.59%), Postives = 291/510 (57.06%), Query Frame = 0


Query: 2   AEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHNN 61
           AE   ++  SN + +D A +IE KI  A+RSRV++ + +AD   +V    +   D     
Sbjct: 4   AEMNHNSGKSNLKNVD-ATEIEFKILAALRSRVTYLRNEADCFTLVSVRRMLEEDIGLEK 63

Query: 62  PPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRK--SVSKE 121
             LD  + F      V E  +           +CLE A   + S++S+ET R+   +  +
Sbjct: 64  CDLDVYKSF------VKEHLV-----------KCLEEAGNNDTSENSQETEREDDEIPTK 123

Query: 122 EAADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIP 181
           E A+  E H+      E   E+  K E   V G               KG KE   +D  
Sbjct: 124 EVAEQSEEHEPMNDAGE---ENTSKREAKDVKG---------------KGNKETLQRD-- 183

Query: 182 SESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEIL-- 241
               I +A+RKR SY+KANSE +TMA +RRLLE+DLKL K +LD  KKFI+++++E+L  
Sbjct: 184 ----IKRALRKRASYIKANSETITMASLRRLLEEDLKLEKESLDLFKKFINKELDEVLQL 243

Query: 242 ---TSCEAAGQISNEKKGSRLKTPKKVSKESSHSTEGSSSEEENDEVKPGKKNATKGRIP 301
                C     + N KK  +  TP K+     +S   +    +N+EV   K  A K ++ 
Sbjct: 244 PDAPKCSTESIVKNVKKKVK-STPSKMVSSEYNSDSDTEGNVDNEEVAVKKTMARKVKLS 303

Query: 302 NSNETKKRKRSTKETVSAKKQSKHVQQTSEEDSDEGGENGSEDGQSESSNEKPVK-KEVS 361
                 KRK    + VS +K++KH +  SE DSD G             +EK +K KE +
Sbjct: 304 KPEMMGKRKSENGKQVSGRKKAKHTEIDSENDSDSG------------DSEKSLKTKETA 363

Query: 362 TPVYGKRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPT 421
           T VYGKRVEHLKSVIKSCGMSVPP+IYKK KQAP+ KRE+ LI+ELE IL++EGLS++P+
Sbjct: 364 TDVYGKRVEHLKSVIKSCGMSVPPNIYKKAKQAPQEKREAMLIEELEQILAKEGLSSDPS 423

Query: 422 EKEIKEVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPV--KTDGDDVDDT 481
             EIKEVKK+K  ++ELEGID +NIV +SRRRS+TS+ APPPKPK+    +++ D+ +D+
Sbjct: 424 ALEIKEVKKRKNISRELEGIDTNNIVWNSRRRSSTSF-APPPKPKVTAESESESDEPEDS 457

Query: 482 EEEEENDEEEE---DDDEEEEEDGEEEDNG 499
           E EEE++E+ E     +E EEE   EED+G
Sbjct: 484 ENEEESNEKAERGSQSEEVEEESNSEEDDG 457

[Close]

BLAST of Lsi08G004240 vs. TAIR 10
Match: AT1G44780.1 (CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08310.1); Has 18105 Blast hits to 11200 proteins in 808 species: Archae - 37; Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants - 674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI BLink). )

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-57
Identity = 207/511 (40.51%), Postives = 291/511 (56.95%), Query Frame = 0


Query: 2   AEELQDNDASNEEAMDVAVDIETKIQNAMRSRVSHFKEQADPNPVVPDNPLSSADDRHNN 61
           AE   ++  SN + +D A +IE KI  A+RSRV++ + +AD   +V    +   D     
Sbjct: 4   AEMNHNSGKSNLKNVD-ATEIEFKILAALRSRVTYLRNEADCFTLVSVRRMLEEDIGLEK 63

Query: 62  PPLDWDERFSLSVEGVLEDKIFFGRERNKERRQCLEGAEEENASKDSEETGRK--SVSKE 121
             LD  + F      V E  +           +CLE A   + S++S+ET R+   +  +
Sbjct: 64  CDLDVYKSF------VKEHLV-----------KCLEEAGNNDTSENSQETEREDDEIPTK 123

Query: 122 EAADSLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKTKNVESDGIKGIKEKDDKDIP 181
           E A+  E H+      E   E+  K E   V G               KG KE   +D  
Sbjct: 124 EVAEQSEEHEPMNDAGE---ENTSKREAKDVKG---------------KGNKETLQRD-- 183

Query: 182 SESTIMKAIRKRISYLKANSEKVTMAGVRRLLEDDLKLTKNALDSCKKFISQQIEEIL-- 241
               I +A+RKR SY+KANSE +TMA +RRLLE+DLKL K +LD  KKFI+++++E+L  
Sbjct: 184 ----IKRALRKRASYIKANSETITMASLRRLLEEDLKLEKESLDLFKKFINKELDEVLQL 243

Query: 242 ---TSCEAAGQISNEKKGSRLKTPKKVSKESSHSTEGSSSEEENDEVKPGKKNATKGRIP 301
                C     + N KK  +  TP K+     +S   +    +N+EV   K  A K ++ 
Sbjct: 244 PDAPKCSTESIVKNVKKKVK-STPSKMVSSEYNSDSDTEGNVDNEEVAVKKTMARKVKLS 303

Query: 302 NSNETKKRKRSTKETVSAKKQSKHVQQTSEEDSDEGGENGSEDGQSESSNEKPVK--KEV 361
                 KRK    + VS +K++KH +  SE DSD G             +EK +K  KE 
Sbjct: 304 KPEMMGKRKSENGKQVSGRKKAKHTEIDSENDSDSG------------DSEKSLKQTKET 363

Query: 362 STPVYGKRVEHLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANP 421
           +T VYGKRVEHLKSVIKSCGMSVPP+IYKK KQAP+ KRE+ LI+ELE IL++EGLS++P
Sbjct: 364 ATDVYGKRVEHLKSVIKSCGMSVPPNIYKKAKQAPQEKREAMLIEELEQILAKEGLSSDP 423

Query: 422 TEKEIKEVKKKKERAKELEGIDLSNIVSSSRRRSTTSYVAPPPKPKIPV--KTDGDDVDD 481
           +  EIKEVKK+K  ++ELEGID +NIV +SRRRS+TS+ APPPKPK+    +++ D+ +D
Sbjct: 424 SALEIKEVKKRKNISRELEGIDTNNIVWNSRRRSSTSF-APPPKPKVTAESESESDEPED 458

Query: 482 TEEEEENDEEEE---DDDEEEEEDGEEEDNG 499
           +E EEE++E+ E     +E EEE   EED+G
Sbjct: 484 SENEEESNEKAERGSQSEEVEEESNSEEDDG 458

The following BLAST results are available for this feature:

BLAST of Lsi08G004240 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G004240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFY5	8.8e-189	80.51	DNA ligase 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445354 PE=4 ...	[more]
A0A6J1FGV2	6.3e-187	80.12	glutamic acid-rich protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0LIS6	7.7e-185	79.30	CHZ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G232480 PE=4 SV...	[more]
A0A6J1JTY1	1.1e-183	78.95	glutamic acid-rich protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1K3E3	8.0e-182	78.54	glutamic acid-rich protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Lsi08G004240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884709.1	6.1e-192	81.01	glutamic acid-rich protein isoform X1 [Benincasa hispida]	[more]
XP_023551365.1	1.1e-188	80.70	glutamic acid-rich protein-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038884710.1	1.1e-188	80.47	glutamic acid-rich protein isoform X2 [Benincasa hispida]	[more]
XP_022939456.1	1.8e-188	80.51	DNA ligase 1-like isoform X1 [Cucurbita moschata]	[more]
KAG7016498.1	2.4e-188	80.00	hypothetical protein SDJN02_21607 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi08G004240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08310.1	1.5e-71	43.92	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G44780.2	9.4e-58	40.59	INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown;...	[more]
AT1G44780.1	1.2e-57	40.51	CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); B...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 410..430
None	No IPR available	COILS	Coil	Coil	coord: 468..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 411..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..449
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 410..517
IPR019098	Histone chaperone domain CHZ	SMART	SM01082	CHZ_2	coord: 424..459 e-value: 1.3E-8 score: 44.7
IPR019098	Histone chaperone domain CHZ	PFAM	PF09649	CHZ	coord: 425..454 e-value: 3.3E-9 score: 36.1
IPR037647	HIRA-interacting protein 3	PANTHER	PTHR15410	HIRA-INTERACTING PROTEIN 3	coord: 1..510

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G004240.1	Lsi08G004240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity