Lsi08G003820 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGTATTGATGGCAAGAAACCAAAAGCAAACAATCTAAAGGCATTGGTTTCGAAGTGGGACAGTCATAAACATAGAATATTGATTAATAAGGATGTTGATCTCGGTTTGCCTGCGTCCGAGGCGCGGCTGCCTAAACCTGAAGGATGTCCGACGATGGTGACTAGGTCATCGACCTTGCCTTGGAATCTAAGGACTAGAAATAAAACGGCTACGATGGATATGGAGGAGGAGAAGAAGAAAAGTAAAGCATTAGATCAGAATTGTAAGAAGATCAATGTAGGAGACGAAAAGAGGAATTCGAGATTTAAAATGAGCAAGAATGAGCCGTTGCTAAAATTGGCGGTGCCGCTTTCAAAGTCTGAGATCGAAGAGGATTTTTTGAAAATGATTGGGAAGAAGCCTCCATCTAGGCCCAAGAAGAGGTCTAGACTTGTGCAACAAGATGTAGTTAACGTAAGTTCTTATTTCTCTAATCTTTTTTCAATTTTCATTCTAATTACCAAGTTCGTTATTGTTCCACTTTTCATTGAGTAACCACTATGAAGGTCTTTTCTCGTACTACATTTTTCAGATTATTTTCTTGTCGTAAATTAATTATTATATAAAAATATTGGACTGGGCATCGCCATTGGGAGAAACTTTTTTTTCTTTTGTTTTAATATTTTTGCATGCATGTTTTTCTACTGTGTGGTTGGGATGAGGCACAAAAATTGAATGCAGCCGGAGTACACAAGTATTTTGCCCAAATTATGTATACTAAATTTTGATACTCTAATTTCACTTAAATATTTTATTCCATACATCTATCAATACTGCATACATGGTTCATATTAGTTTCTTTGTAACATATACTACAAATTTGATTCGTTATTTTTTTAAAAAATAAATAAATAATAGCCCCTTTAGTAGTATTAATTTTAATGTTCTCATGTTCAACATAACTCAAGTGCTTCATATTTTATAAGTAATAGATACCTTATTGTTAACTTTCATAAGTTATTGGTTACCTGATGTTAATAAATTGTACAATGATTTGATCATTTTATTTTATTTTTGTAGACTACATATCTTGGATTGAGTTTGGCTGCGATTTCCAGTGATAGATATGATGTTTCTGAACCACCACCTCACAAAAAGAAAGTAAGTTCATTAATCATTTAA ATGGATGGTATTGATGGCAAGAAACCAAAAGCAAACAATCTAAAGGCATTGGTTTCGAAGTGGGACAGTCATAAACATAGAATATTGATTAATAAGGATGTTGATCTCGGTTTGCCTGCGTCCGAGGCGCGGCTGCCTAAACCTGAAGGATGTCCGACGATGGTGACTAGGTCATCGACCTTGCCTTGGAATCTAAGGACTAGAAATAAAACGGCTACGATGGATATGGAGGAGGAGAAGAAGAAAAGTAAAGCATTAGATCAGAATTGTAAGAAGATCAATGTAGGAGACGAAAAGAGGAATTCGAGATTTAAAATGAGCAAGAATGAGCCGTTGCTAAAATTGGCGGTGCCGCTTTCAAAGTCTGAGATCGAAGAGGATTTTTTGAAAATGATTGGGAAGAAGCCTCCATCTAGGCCCAAGAAGAGGTCTAGACTTGTGCAACAAGATGTAGTTAACACTACATATCTTGGATTGAGTTTGGCTGCGATTTCCAGTGATAGATATGATGTTTCTGAACCACCACCTCACAAAAAGAAAGTAAGTTCATTAATCATTTAA ATGGATGGTATTGATGGCAAGAAACCAAAAGCAAACAATCTAAAGGCATTGGTTTCGAAGTGGGACAGTCATAAACATAGAATATTGATTAATAAGGATGTTGATCTCGGTTTGCCTGCGTCCGAGGCGCGGCTGCCTAAACCTGAAGGATGTCCGACGATGGTGACTAGGTCATCGACCTTGCCTTGGAATCTAAGGACTAGAAATAAAACGGCTACGATGGATATGGAGGAGGAGAAGAAGAAAAGTAAAGCATTAGATCAGAATTGTAAGAAGATCAATGTAGGAGACGAAAAGAGGAATTCGAGATTTAAAATGAGCAAGAATGAGCCGTTGCTAAAATTGGCGGTGCCGCTTTCAAAGTCTGAGATCGAAGAGGATTTTTTGAAAATGATTGGGAAGAAGCCTCCATCTAGGCCCAAGAAGAGGTCTAGACTTGTGCAACAAGATGTAGTTAACACTACATATCTTGGATTGAGTTTGGCTGCGATTTCCAGTGATAGATATGATGTTTCTGAACCACCACCTCACAAAAAGAAAGTAAGTTCATTAATCATTTAA MDGIDGKKPKANNLKALVSKWDSHKHRILINKDVDLGLPASEARLPKPEGCPTMVTRSSTLPWNLRTRNKTATMDMEEEKKKSKALDQNCKKINVGDEKRNSRFKMSKNEPLLKLAVPLSKSEIEEDFLKMIGKKPPSRPKKRSRLVQQDVVNTTYLGLSLAAISSDRYDVSEPPPHKKKVSSLII Homology
BLAST of Lsi08G003820 vs. ExPASy TrEMBL
Match: A0A6J1I6T6 (uncharacterized protein LOC111470496 OS=Cucurbita maxima OX=3661 GN=LOC111470496 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.4e-11 Identity = 67/190 (35.26%), Postives = 92/190 (48.42%), Query Frame = 0
BLAST of Lsi08G003820 vs. ExPASy TrEMBL
Match: A0A6J1K1T4 (uncharacterized protein LOC111489849 OS=Cucurbita maxima OX=3661 GN=LOC111489849 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.4e-11 Identity = 62/177 (35.03%), Postives = 90/177 (50.85%), Query Frame = 0
BLAST of Lsi08G003820 vs. ExPASy TrEMBL
Match: A0A6J1GNC6 (uncharacterized protein LOC111456072 OS=Cucurbita moschata OX=3662 GN=LOC111456072 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.1e-11 Identity = 67/190 (35.26%), Postives = 91/190 (47.89%), Query Frame = 0
BLAST of Lsi08G003820 vs. ExPASy TrEMBL
Match: A0A6A4PVY2 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00025083 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.3e-11 Identity = 67/192 (34.90%), Postives = 94/192 (48.96%), Query Frame = 0
BLAST of Lsi08G003820 vs. ExPASy TrEMBL
Match: A0A445JUK6 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_017350 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.3e-11 Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = 0
BLAST of Lsi08G003820 vs. NCBI nr
Match: XP_038875002.1 (uncharacterized protein LOC120067524 [Benincasa hispida]) HSP 1 Score: 189.5 bits (480), Expect = 2.6e-44 Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 0
BLAST of Lsi08G003820 vs. NCBI nr
Match: XP_022971825.1 (uncharacterized protein LOC111470496 [Cucurbita maxima]) HSP 1 Score: 79.0 bits (193), Expect = 4.9e-11 Identity = 67/190 (35.26%), Postives = 92/190 (48.42%), Query Frame = 0
BLAST of Lsi08G003820 vs. NCBI nr
Match: KAG7032520.1 (hypothetical protein SDJN02_06569, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 79.0 bits (193), Expect = 4.9e-11 Identity = 68/195 (34.87%), Postives = 94/195 (48.21%), Query Frame = 0
BLAST of Lsi08G003820 vs. NCBI nr
Match: XP_022994039.1 (uncharacterized protein LOC111489849 [Cucurbita maxima]) HSP 1 Score: 79.0 bits (193), Expect = 4.9e-11 Identity = 62/177 (35.03%), Postives = 90/177 (50.85%), Query Frame = 0
BLAST of Lsi08G003820 vs. NCBI nr
Match: XP_023521178.1 (uncharacterized protein LOC111784825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 78.2 bits (191), Expect = 8.4e-11 Identity = 67/190 (35.26%), Postives = 91/190 (47.89%), Query Frame = 0
BLAST of Lsi08G003820 vs. TAIR 10
Match: AT3G18295.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11 Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of Lsi08G003820 vs. TAIR 10
Match: AT1G25370.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 56.2 bits (134), Expect = 3.2e-08 Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of Lsi08G003820 vs. TAIR 10
Match: AT1G48770.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 55.8 bits (133), Expect = 4.2e-08 Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 0
BLAST of Lsi08G003820 vs. TAIR 10
Match: AT1G68340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07 Identity = 45/137 (32.85%), Postives = 63/137 (45.99%), Query Frame = 0
BLAST of Lsi08G003820 vs. TAIR 10
Match: AT1G55340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 51.6 bits (122), Expect = 7.9e-07 Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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