Lsi08G003530 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G003530
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description40S ribosomal protein S15a
Locationchr08: 9685503 .. 9704262 (+)
RNA-Seq ExpressionLsi08G003530
SyntenyLsi08G003530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTGGTACATTTCATCTACATCCATTTCACATTTTCCTAGATTACCTTACCAAATTTGGTTAGGTTACTTTAACCGTATGAGATTATCTAAGAGCGAGATGTAACTGATTTTATTATCACATTTGTTTCAATCTTCTATTCAGTATGTTTTTATTTACACATTGTTTAATATGAATTTTAATAAAGTCATCTTTATAATTATACTATGCAAATTTGGTCTCGAGTATTACAATTGTAAAACTAAGTAGGGCTCGAACCTAAGATGTGAGAAATAAGGGGCCTAGAGGTGCTCTACCATTATAGCAAGAACATGTTTTTGTTAATTAGACAATTTCATTAATTAATATTAGTTTACAGTAAAAATTTGAGGGAATACACGAGCTCCTGAGCCTTAAGTGGAATGTTGGTATACCAACTTGTCTTATCTATATAAAGAAATTTTTTTTCTTTTAATATATAAATTACGTAAAATAACTCTAATTGTGCTTATGTGAGCATACCTCAATGCTAATATGTACTATGTACTATTTCTCCTGAGTTTGGAGGTTTAAATCTTCATATCTCACTTGTTGTACATTAAAAAGAAAATAATAACAAGGGTATGAAGATATGAACCTCCGATTTTATGAAAAGAAAACACATGTCAATTATTTCTGAACTATATGCGCTTTCGTACTAATAACTCTAATCAGATTATTAAAGTTTAACTCATTTTAATCGTGCTCCATTCTTTTTTTATTTTACTATATTTGGAGTGAGAGAATTGAACCTCTAACTTCCATATTGATAATATAATTGAATTTATTGCCGTTGCTTCATCTGTGTAGGAGGTTTGGCCATGTTATATTTTAATTATTGGGTTGATCAAATAATTTATTTAAAAAAATTGTAAGAATAAAGGGTCCTGAGCGTTTTTTTACAGCAAATATTTGATGTATTTTTTTCAAGATTTACATAATGACATAATTAGGTGGGAAGTGAAATGGGTTATTTAGATTGGGAATGCAGTTTTATATAAAAATAAATTGAATGAAAAGGGTTGTTTCGAAAAATAAAATTTGGAAATTGGGGTAGAAAGTTTGTCTCCATTAGAATGCATTTCTTAAATAGACGCATTCTAACAAAATTTTAATTAAATTCTATGTTGTAACCGTTAGTATTAAGTCATGTTGAGAGACGCATTCTACTTTGTATTATTTATTTATTTATTTATTAACTTTATTCTTTTGTCACCATCGTTCAACTAATGTTGTAATCAAATGTCAGTTTAATCGTATAAATTTAATACACGATGCTCCATAGAATCCAGAGGCTCGTAGATAATCCAAAATACGAGGGTCTAGGTCTTCCCGCCTCCAAATAACAGCCTCTCGGCGATGACAATGCATAGCATCAATATGCTCATCTTGCCAAACAACTCAAGGTCGATGACTACGTTGTAGGTATAAAACCGAATAATTGTATGACCTTGTGCTAATACCATCGTCCATCTAAAGTTATTTAAACAAGAAAACAATTCACACAAACAATTAGTATGAGATTACAATTAACACTAACAATTAATATGAGGTAACAATTAACACTAATAATTTGTGGAGCAAATATGTTGAATTTGTATTAATCATCATAAAAATAGTTTACATTCAACATGTGTAATAACAATGACTCCTATTTACTATGTCGTGTTACGACCACAATTAGGACATCTTTTCTGATCATGTCCTTCTTGTCTGCAAATACCACAACGTAACTTGATTACTGCTTCCCTTCAATCCGTCTCATTGTGTATGCATGAAGTACATGGTCTACCAATACTTCTTACCCTTGTCTCATTTGGATAGATAGTGAGAAAGTTAGGGTCAAGCTAATATTTTCGATCGGGGATAGAATTAAACTGAGGTGAATAACCGGACAAATAAGTAAGGATCTTGTAATAGTCTTCTATGTAGTACAAACAATCAAGACCTATATTTTTACCTGCAACAATAGAATGAGCACATAGGATTCTGTAACTTTGCCACTTATTACATGTGCATGTCCTCTCACTTGATTTTACTCAATGTGTGGTTCCACCCTTCAGTGTTATTGGATTAATTGCAGTAATGACATCACACAAGTCTATCCTCTAGTTAAATATGTTAACTTCGTGTGTATTTGCACGTCCTTCCCAACGAGTTAATTTCTTAATGGCAAACTTATGACATAGACGAAAATTATCTACTTAATTTAAAGCCAATACGAATATTAAGAATATTTTATTAAGTGAACAAATTTACCTTATGAAATATTCTCCAAATTCAAGAGCAACTTTTATTTCTACACGATGAGTAGCAAAATAGAAGATAGTTCGATAAAATATTGCTTGAACTAGTGCAGTTATGGGTAGCTTCCTGGCTCTCTTTCAAAATAGCATTATAGCATTCAGTCACGTTTGTGGTTAGCCATCCATAACGATGATCGCCATCATGTGACTAGGTCCATTGTGTAAGATCCAAAGAAGCAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCATATGCAATTAGAGTTCGCGTTTTGAAGTTTGGCCATACATCATTAAACTTTCAAACTTGATCCTTTCATCCTGCACGATACACCAAGCTTTTCAACATACTATTCTTATATTTGTCGTTGAAATTACTTGCAACATGTTGCAAGCATAATTTGTGATGTGCATTTTCTCAACTATTGTTAGGGTTTCGCAAGACAGATATAATGCCCTTGTGCCTATCTAAAATTAGACACATTTCCTTCATTCCTTCCATGTACCACGTGATCCCATATATTTTTCAAAAGTCAACCCCATGAATTAGTGGTTTCCTCTGGTACAATAGCAAACACAATTAGATAAGCGTGTCCATTTGCATCGACTAAGGTAGCTATCAACAATTTCCCTTCGTACTTTTCTTATAAATGTGTTCTATCAATCTGAAGGCAATGCTTGAAACCCTCAATAACAGGTCCAAATGACCAAAACACGCTATTAAACATGACAATCCTATCATCACCATCCACCTCATTTAGCCTCTAGTAGACAATTGTACCAAGATTTGTCATTTCTAATATATTCATCCATGTAAGCAGCAAATTGTACGATTCAATCCAATCTTCAAATGTCTTGACAATTGCTTTCCTTCCTCCATCCCATACTTTCCAATAACTAACAGAATACCATATTTTTCTAATATAATGTCTTGTAATGTTCTAATATTAACAGATGGATTTCTTTTAACAATGCTACTTACCTCAGTTGCAATCAAATTGGAGTCTAATTGACTGTGATCTTGACTCATTCTTGCATACAAATAAGAATGGGGGTCATTATATTGTGTGATTTCAAATTTACCATGTTTTTTATGGCAGCAGGCACGCAGTCTCCACATACAACCATTGTCGTATCTCTTACACCTAACAACCCAAATGTTCTTTTTCGACTCAATGACTTCAAAATTTTGATGAAGAATGATTGAATAGCTTTTCACAGCATTTTTTAAATTGAACTTTGAGTTAAATATCATCCTCGTACTCAAAGAATCAGATCCAGTATTTTCTCTCTGTGCTTGAATCAGGTTTAATATTCATGTTATTCAAGTCTATCTCATTGAAGGTTTCAGGGACATCGTGAACACCATAAGATCCATGAGTTGGTTGCTCTAGATCACTTTCATCATTGTCTATTTCAACTTCTTTTAAATTTGTGGTGATAGTTGGGTCCCAAATCGACCTCTTTGTTATTAACACTTTCGACCTCAGTATTATTTTCAATTTCTCTCGTTGGTGTTCGATTTAAAATCTTTGGTCTAGAAATATAGAGATCCACTGTATTTGGAGGGGATGAAGCATTGTTCATCATAAACGGTTCATTTCATAATGAGATAGGGATGTAGAAAGTAGATCCCACTACATAATTACCATATATAAATATGACCTCTATCCCATCATCTCTTTCTATAGATAATGCATCACATAATCTCTCAATAAATTCATTGAATTCAGTTTGACGAAGAATACTTATACGAAAACATGGTTGCACATCGTATGCGATACAATGTTTCCATTCATATATATAACATAGAAACCCCACAACATCCCGACCAATTAAATTTGATATTTACAAAAAGGATTATGTAAGTAAGGTAGTTTTTTAAGGCAAGGTAGAATTAACCAAATCAATTTATGTCTTTTTTTTTAAAAAAAAAACATTAGATTTTTTTTCCTTAAACATCTTTTACATGATTGATGACATTTATTATATATTTTTAAATGCATTATTTTTCTATGAGATCTTAGATATGGTATTCTTTTTTTGGTTTTTTTATATCAACTTTTTAAAAGTTAATTATTAAAAAAATCACTATATATATATATATATATATATATATATATATATATATGGCATATTTTTAGAACTAATTAGATTTTACAAAATCAAATATGTAATCCTTAATTAAATACTATCATTTTTTATTATTTTATTTTTTAAAATAAGACCTTAGTATGGTATCAATTTTAAGTTTTTTATCTTCACTTTTTTACAGTTAATTATTAAGAAAATCATATATATATAACAACATGAAATAGAGATCGTTGGTGTTAATTACACACTAAATCTAACAAAACCAAATATGAAAACTCTAACTATATAGTATTGAAATAATAACAAAATTATAACAACATCAAATATAACCTCAAACATAATAAAATATGTTTTATTTTTGGTTAAAAATCACTTCTAGTCCCTAAACTTTCATAAATGTAACAATTTAGTCTCTGAACTTTGGTTTGTAACGATTTAGTCTTGAACTTCAATCTTGTAGATTGTTCAATGGTAGTATCAAATTAGTAAGAAACAATCTTTTTTCAATCTAGTTTTGTAGTGAATCTTTCCCTATCAATTTTTATAGATCCTAAACATGTTTATACCCTCTTTTCTTATATATTCTAGCATTATTTGAAACTATTTAGATATTTAAAGTTTTCTCCATCCATCCTTACGGTAGAGACGAAAACACATCCAACAGTAAGGACAATTCTCTCTAGCTTTTAATTTTCCTTAGGGGTTGTTCTTAGCAAACCTCAGTGTTATTCTTAGTATTATTTAGATCTTAAGATGTTGATTTTAGGTCTGAAAATCAGAATGAAAAATGGTTCAAACAGCCCCTAAAACTAGTCTAAAATCATGTTTTGTCGGTATATGCAATATTTCTAGTTTTAGCTTGCTTGACATCAAAATTAAAATGTGTTGACTATGAAACTTTGACATCATGACCAATAGTTTAAATTTAGCCAAAAAGTATGTTTAAAGCGTTAAAATTATTTTTTTTGTTTTATTTTGCATAGGGCTTAATTTTGGTAAAGACTATTACTCGGATTTTCAATTTCTTTTATTAATCTTATAATTTACAAATTATTTTTCATGTATTTTTCAGATATGGGTTAGAGACTAATAAGATCACTAAAAAGATTAAGTTATGAGATTTATATAATAATTTTATTAGTAATGATAACTATGATAATTAATATGTAGTGTAGGTTAGCTAGATAAATTAGTGTAATTAGTTAGCTAATGAGCTTCCTTTAAGAAACTAAAATTTAGTTTGTTAAAAACTAATTGAAATCATGATAAATGTTATATAGGAATCTTATAAAGGATTTAGATTTCAAGCTTGAGGTAAGTGAGTTCTATCATAAGTTACCGAATTGTGTGTTTTATTATTGTGTTGTTCAATTGTATAGTTGTATGGTTATTCGTAAGTAGTTTGCACCATATGTTGCTAATTGAATGTTTATAATATATATGCGATTTATGGTTTATGGTTGTGTTTGACTTTTATAAATAATTATCTTTTCAGTTGTATTTTCTTGAATTGTGAAGTGTTGAATATTTGAATTTGATTATTGATTAGGATTGATTTATATTATGTTTCTTTTATATATGTTTGATGGAATCTTTTTGATTTGTGATATTTAATTAATGTTTGAGAAAGCATGTTGCAGTATGTAAATTTTCCATGATTTTCCGCTTCTCATGATTTATGTTAGCATGTTGATTGATAATACATGTTTAGGTTAAGCATGCCATGATTGTGTGTTACATTGCATTGAAGTCTAGTTAGCAGTTTTATGTGTCATGGAATTAAGTAAGAATATGTTATGCATGAAATACCCAAATTAAGCAGTTATGTTATACAACAAGGTGCATGATATGATAAGTATGGTTTCTGCTAACGGTTGGGCCTAGAAAACAAGATTAGTTCATGTTAATGGTATTTATAAGGGGCAATTCCCTTGTAAATATTACATGTGGAATTGACGGTTATGGTATGGGGTATTTTTACATAACATGACGCCAAATCAAGGATATAGATATGTATGTAAGGATATGCAAACAAGTGCAAATAAGTTAAATTAGGTTGTTGCATGATCTATATGTTAGGATAGATTATGCAAGCATGCAAGCATTATGTGTGTGATTGAGCATGAAAGTTTCTTATGATGGGAACCACTTACAGAGTAGTTTTATACTACCTCTCATGGTCTTTTTTTTTTTTTGGTAGTCATGTAGATGATGATGAGATCGTCGAGGATGATCTTGGCATTGAAGAAGAGGAGCCATGAGACAACTTGCAACCATTTTTGTTTAATTAATTTAGAACCATATTTTTAGTTTTATTTTTTACTTCTTATTAAAAACATATTGTTATTTTATTATTTTTGCTGCTAAACTTTAATTTAAGTTCTATTTAGCATGATAAGACATATTTTCAAATAGAAGCATGAGTTACACACACACATATACATATATGTATATATTTATACATATATAGATATTAAGAAATTATGATTTAGGAGTAATTATCTCAATTTATGTTAATAAATTATATATAAAAATTGGGGTCATTACAGTAAACATATGAGTAATAAGAAAAAAATCACTATAAAATTATGTTAATTTATAATGAAATAAGAAAAGTATTAAAACTTATGTAACAGAAAAATGTTGCACCAAATTTGTTGAGGAAGTGTTGAAACTAAGGAGTATAATTTGAAAAATGAAGTGGTTTGTTGGATTTAAGTTGAAAAATATTGAGAGGAGGTAGAGGGAGGAGAAGTGTTGTGGAGTTGGATGAAGAAGATGAATTTGGAAAAAAGAATGGTGAGTTGCGATTTTTAAAAGCAAAAATTGTTTGAAATAGGTATTTCTCCTCTTTTTTTTAAAAAAACAAAAAATTGTTTGAAATAGAGAGGAGCAACTAGGAAATAGGTCTGGACGACCTCAATAAGGGGTGTTGGCTACCGTCGACATCAGTCAGGCGTCACATCACGTCAGGTGACAGCGACAACTTTTTTTTCTTTGATTAGTCAAGGATGCGTCTCTTTAAGAGATACATTCTTGCTTTTTTTTTTCTTTGCATTATGACCTTTCCGTTACGTTCCATTCGATTTTCGTTCGGTCAAATTCTCAATCCGTTCGGTCAAGTGTTTTACCACTCTGAATACATCTATTTAAGATATGCATTCAAATGAGGCAAAAAAAAGTACCCTCTTTTCCTAATTTTTTTTCAAACCACCCTTTTTACCTAATTTTTTTAAAAGTACATTTTTCTTTCTAATCAACCTAAAGAAATGGAAATAACATCCAACAAACTATTAGCTTGAACTATTTGTCATTAAGCTTGGATAAGTTCCTCTCGAGGAATGTGAGTCTCCATGAGGTATTTGATTTGGTTCGTCATGCTCATTGTGGCAACAGACATTCGCATGAAAATTTGTTTTTTTTTTCGATTATAAAAAAAATGGTGCCAAGGCCGACCATTAGGGTTATCCTTGGTGAAAACAAAAAAGTGCAAACAAGGAAAAGAAAAAGGAGAACTTACGTGATGGATAGCATAAAGATTCTGAGACATAGCAAAGGTAGGATTGTCATAGTCAGTTTTTGCAGGAATTGGATCGCTGCTAATGCTTTTTCAGAGTTCAAGACTTTTTGCTAGAAGATTAATCTCTCCACCTATTCTGGAATAATCATCAGAGAGAGTAAATGCTCGGCTCTAGATGAAGAGTTGGCATTGTGGGGGAAAAGATGAGCTATGAAGTTGAGGAGATTGTCGATGGTTAGCTGGAATAGGTCGNGGGGGGGGGGGGGATAGTGGAAAGATGGGTTCGACTGGTCATCCTTGGTAATATCCGTAATTTCATGCTGGGAATTGTCACAGGAGGATTCACCTACGTGCGATCCTTTTTTAGACATTTTTTTGCGATATTCCCATAATGAAGCACATTAAGGGATCATACTTGAAAAGGAGTTAGTTGGCCGAGGCCGACCTTAAGGGTTAGACAAAGCCGAAGTTCTTTTTTTATTTTTTTAAAAGGGAAAACGTTAAACCTGTCTCAGGAAGTGACGAAACTAAATTGACAGATAGGAGGTTGCTTGGGCAAACTAGAGATGGAACAAAGCAAAGATCTTCTTGAAGGGAACTTACTGTAAAGAGGAACGAGGATACAACAACAGAAGAATGATAGCGACGAGGAACTGCAAGGGACAAAAGAGCCAAGAATAGTTAGATCGTCATCAAGATAGGTGGTTCGAAACGGGAAAAATTGCAGGAGCTTACCGTACTACCCAAATCTCGTTGGAACCACATAATAATGCCAATTCTCGCATACCCAGAACCAGCCATCCTTCCATTTCTTTATGGAAGTAGACCCATTCACTATAGCCCCCTGTTTAGAGCTCAAATAGTAAAAGTGTTTGCCAAATGAAGGAGTGCGACTTATTGTGTGAAAAGACATAAAAGAAGACGGAGATAAGGGAGAGCCATTTTCGTATCTAGACCATAAGACATAACACCCGATAAGATGACCCCACCCTTTTGGAGAAATTTGAGGGGGGCTAGATTAAGCAAGACTAGAAAACTTTGGGGGAGAAAATGAAGGGATAAGCGAATACCAAAAGGGAACATAAGTAATTAAATAGAAGACAACTTCACCCACGAGAGGATCGTCCATGCTTTAGTTAGAACCAGGAACTCTCAGGTGCAAGTCCATGGGAATGTCATACTTGTACTGCAAAAGCTCAAGTTGAGTCTCGGTCACCAAGGATGACAAGGTAATGGGTTATGCTTTGATTCCAGTCTCAAACTCCTCTTTAGCATAATTATCCCCATCGTAAGCAAGATCAGAGGAGTCATCACCATCAACAGATACCCAGTTGGAGCTATCTTCACTATTCATGCAAATTAAAAAGATAAAAGAACTTGTAAGGAGAGTAAATTTACCTTTGAAAAGAAAACATGGAAGGATGAAGGAGAAAGGTAGAGGTGGTTGACAATTTATAAAGGGAGTGTGTTTGTTTAGAGGGGGGGGGGGGGACAAGGCATGAGGTGAGAAGACTTAACGTGGCACGATAGCCAAAGTTGGAGTAGCTAGGTGTCAGCCGATGGGACTACACCAAGTTTTGGAAGTTTAGTGTAATATGACAAAAGTATGTTGGTTTTTTGGACCTTTATCTCAAATTAATTAATTTTAATTAATTAATTAATATTTTGATGATAACAAACCTGCTTTTATTCACTAATAATTTAGTATTTTAAAGTGTCCATTGTGTAGAGCTCAAAACAAAGATTCCAACGCAATTTGAATCACACAAATCGGAGCTCAAACGAAAAAGATATAGTTGAAACAAGCTTACCAGAAAAATCCTAAGTTGATGACGTGACATATTTTTTCATCAAAGTGGACCAATTGAAAGGTGCCATTTGGAGCATGAGAGGAATGACACATGGTGGACTTTTGATTTTTGGATTGAATTTAAAAAGAAAATGAATATAATGTTATATATGTTTATGTCTAACGGCTTATTGGCTCTAAAAGAAAATGAATTTAATATTATATATTTTTGTGTCTAACAATTAGTTGACTTTAAAACTAAAAAAAATACTTTTTTACTTTTGATCGACCAATATGTACGAATGATAAAATAAGAATAAATATGGTCTAAGTGCAAGCAGACACTATCGATGAAATAAAAAATCTTGGATTATTCCAAGAGTCGAATCCCACGAGACTATTTATGCAATTCAATTTTTCTAAGAAGGAGCTTTTCGATTCAAACCAAAGGGTAACCTGTAAATTAGTGATTTTGAGGTTGAATGTTGATAAATACAATAAAAAAGAGTGTTGAACAAGGATACAATTATGTTTCAATCAGAGGGACAATATGCCTTAGGTAATGCGATCGCATCATACCAGGACAGTAACTTAGTCATGGACAGAAATCTCCTCCCATTCGGTCTTGTATAAAGTTTCTTTAGGAGCTCGAAGCAGCTAATGCCTATATTTCTATGGTTAGTTGGATCTTAGATTAATTCACATGCAATTTCTTTATCCTATGGTGCCCCTTATTTCTAAGGCGATGTGACCTATTTTTAGGCTCTTAGTCCCATATCCCTTTGTGACATCAGTTTATATCCTAACCTTTTCAGCATTAAGACTCAACTAGATTGCTAAATTAAGTGATCAGTTTAACTTAACAATATTTATTTATAAACTCAACAAAGAAAATGTAAAAGTTAAAGAGGTATGAAGTATAAGCATTGTTTTTCAAGCCATAAAGCCCTAGGGTATTCAAATAAGTGAACCCCTTAGAGAATTTAGCTCATGATTAAGAACAAATGAATAGATTTCATTAGATTATAAATCATGATTATAAGATAAAATATTCAACGGATCAAAAGAAATAAAGATTGAAAAATGCAAAGAGAAACTAGATGAAATGCTGGAAAATACAATAGGAGAATCTTCTTGGACCAAGCTCTAACACTCCTAATCTTTTCCTATGGTGGATTCTCCTTTCTCAAGGATGATTCCTATCTCTCCACATGTTCTCATGTGGTAGGGTAACCTATAGTTGAAGTTCAGTTGAAATCCTTTAGAGGAACAACTGTTCGTGAAGGTTTCTAACTGAGGAGATAAGAACTCGTCCAAAGGATAGCTGGAATTTGGGTGTGATTGTGGATTGTCTCATGCTTGAAGAATGAAGGCTTCCAATCCTATATATAGGCCAAAGTTTGTTGACGGGAGGCCTAAAATGGTGTTCTGAAAGTTTAGCTAGCATTTTAGATGTTGAATAACAACTTGGACCAAGAAAATAGCAACCAAAATGACTGGGCACAAATTTGAAAAATTAGGGTTTCTAATGCGGTCTCATTGTCCTGGGCGATGTGGGCGCATTGAAGTCAAAATTTACAAAATAGTAAAAAAATAGCATAAAAACTCATATAATCATCCCAAATCACTAAAAACACACTTTAGCTAACCAAATGACTCGTATTTCGCTATTTTATCCAATTTAAATCATTTAAGGGGAGGAATATCATGCAATTGTCATCTTTTACTAGAAAAAAGTACTAAAATAGATGGTAAAAACATGCAGTTTTTGGCATTTATCAACTTTTAATTTCAACTATTCAATTTTTTTTAACAACATCCACTGGGCCCAAATTGTATTTGGATTTCACCATCCTCCCTCTCTTTTTAAACTCTCCATCTTCTCCAATTTTTAATAACTTCACATTTTTACAATCCTCAAAGCCACCATTGTTATTCTCTCAAAACTCTCATTTTTTTCTTGAGAGAGATATATTGTATTGTGAGGATTAATTTGTTGAGTGCTTAAACTTATAAAATCTACTCTTTAAGAGAGTTTCTCAAGTGTGTTCTTAGTTTTTTCAATTCATTGAAGGGTTGCTCTTGACTCCAGAAAAAGAGTTGTTGTAACGGTTTGATCCTCAACCGTGGAAAGGATTGAGTTTGTTTTTGCGCCCGGAAAAGGAATGTTGTAGCGGTTCGAATTTAAGCCATGGAAAGAGTCAAGTTTGTAGTGACATACCCAAGTAGAGCTTGAGAAGTGGATGTAGGCCGATTGTGCTAAACCACTATAAAATTTTCGGTGTCAATTTCTCTATACCTCTCCTATTTAATTGCAATTAATTTGTTATTATATTTTATTGATTGAAATTAATTGCAATTTTTGTTCTTAAAATTAAATGTTTGATTGGTAGTTCTTAAATTTCTATATCAATTACCAATCTTGTTATTAGAATCAAATAGGGTGCTTAAAAGTGTTAGTTTAATTTCTTGATTACTTTGGGTTGAATTTATTTGCATAAAATTCTTGTTTAAATTACTTATTAGTAAAAATTGTTAATTTACTTAATTAGACCCACATTAGGAAAAAGTTATAATTAGTTTTAAATAAACTCCTATTCACCCCCTTTAGGTTGCCATGCCGATCCTACAAAGAAGACATGACCAAAGGAGAAATGACAAGAAAAAGGGAGCTAGGCTCGACTCGACAGCCAAGCCCGATGTGATAAATCAGGGTTGAGGTGACTTGACATGGTACGACAGTTGAGGATGACGTAAACAAATGTCATTTCCATTAATCTTCCAAAAATTTAGAGGTGAAATAAGTGTTTATAGGCTTAATTTTCAGAAACTAAAAACAAAAAATCAAATGGATACCAAACGGGGACTAGACCATCAACAATAAATCATTTCCATTAATCTTGCACAATTGACTTCTAAGTGTATGCAATACAATTGACTTCTTCATTTATCATCTCATACTCCACCATAACGAAGTAAAATCTGGATATGGGTCATTTTTAAATTATAAAAAATTCTCTAAATCTTGCAAAAACAAAAACAAAAACAAAACCAAACAAAAACAAAACCAAACAAAAGTTCCAATATCCTTTAACTTATTAAGATGCTACAAACTACCTCATACTTATCTCACAATTATCTAGCAACTATCTTAAAGTATCTCGTAATTGTCTAGCAACTATTTCACAACTATCTCACACCTTAAAAAAAACATGTTTTTCCAAATCCTACTACATAAGAAATTGAAAAACTTTACCAGGAAAAAAAACTTAATTTTAACTCAACTCAACTAAACTGTGAATGAAAGTAGGAGACCAAAAAAAATCTATGACAATAAAAATAAATCGTAAAAACTTACTATAAGAGAGAATGAGGTGCAGATAAAGTTGAAGTTGCTAATAATTTTAGAGCACGGGAGAAGTTGGAGAGAAATTAGAGAAAAGATGAGAGTGGAATAGAAATGATGGAATCGACATAGAGAGAAAGATGAACCTATAGTTGGGTTCTTGTTTAGTAGGGCAAAATAGACATTTCATATACCCAATTATCTTATTACTCTTTAAACTCAAAATACATCCCAAATCTGGAAAATTGACTAATATAACCCCTTTCAAGTTTTTGTTTGGAAAAATGGACCCCTTTGTAAAATCTAGTTTTTTTAGACTTTTAAACTTACACCAAACATGTGAAAATACTATTTTACCCTTCAAACATTTTTGAGAATTTAGAAGTAACTTCTCCCTCTTTTCTTCCGAAAGACTTAAATACAGTGCATCCTTACGATTTCTTTAGATTTTTCGAGTTTAAAGAATATATCAAGTCTTTCTTCCGCAAATCTTCTTGAATCCCTCATTCCATTGTTTCATGCTTTAGGTCTTTTTTATTATTTTTTCCACATATTTTTAGGGTTTTCGAGATTTTTTTTCGCAAATTACTTTGATTCCATTAATTTGACTATAAAAAAGATATATTATTTTCAATGGTTCTGCATTTTTTAATGACAACTCTTGGTTGTGAGACTCATTTTAAAGCATCTTGTTAATTTTTAGCACCTTTTCATTTAGATCCAAAAACAACATTTTTAGATAAGAAATGAAGTTTTTTTTTTTTTTCCTACAATCCGAAGCATCTTGATTGGGATTCATCATAAGGAGACTAGGTCGAGTTCGGGAACGGTGGGTGGGGGTGGGGAAAACTGACCTGGGGCTGGGAATAGGCACTTTTGGTTTTTTACCAATCTCGACCTTGGTTGGGTCGAGACCTGGCCAAAGAGTTTGATGGTGAAAAACTGACGTTGAATCGAATATTATAGACTTCTATTTTTCTACCCTGTCACGACCTTAGTCGAGTTGAGACCAGGACCTAGGACAGGGGATGGATGCATTTTTTTTTTTTTTTGCGTTGGTCGGACCTTGGTTGGGTCAAGACTAGGGCAGAAAAATAGAATGCATTCATCTTAATTACTACAAATTTGTACTCATTTGAATTTATATCGCTTATCCTATAAACTCGATTTAAGAATTTATTGTATGTCGTTCCAATCTCTATGTCAAACCCTCTCAAGTTTCCTGGCTCGTAATCTTTTTCACTTTCTTCCCAAATACCACCAAAACAAATTGAAACACGAGGCATTAAATCACCTAAAATTTATAAAGGTTTATTACAATGGGTGCAACAAAGAATATAAAATTAAAAAAAAAAATATAGTCCACCCCCGTCAGACTTACATTGGACAAAAATTTGAAACTTTTACATAAAAACAATTATAGAACACATGTATCTTGAGCAATTCAGACAATAAGATGTTAAATAGATGAAATACATGTCTTTTTATGTAATGACACATCACAACTTTGTAGAGTAAAAGTTTTGTGAAGAGAAAAGTTTTGTGGAGAGAATTTGGCTAGGTTGTGACTAGGGGTGATAGCCGGTTTGGTTTTGTCGGTTTTGGGGTCAACCAAAAACCAAACCAACCAAATCAGAGATTTAGATAGGTGTTCAATAAAGAACAAAACCAATAGATTGGTTTTTATTTGGTTTGGTTTATTATTGGTTTCGCAATCGGATTTTGACATTTTCATTTTTTTTCTTTCCAATTTTGTTTTGAATTGGTCATTTTTACTAATTTTAAATTAAAATTGGGTCATTTTTTTTTTATAGATTAAAATTGAACATTTTTTTTTGGCACTTTCTAAATAATAAAATTATTCACACTCCATAATAATTTGTCTTTTTTCTAAACAATAAGTATATATGCACGATAATAATTAAAACACTAAAAGATACCTAATATTAAAGTTTATTTTGAAGGACATATATACCACGGTTCGATACGATTTTCCAATCAAAATCAGATCCGAACCAATATTTTTTTTAGCTCCAAATAAAACTAAAAAACAGACTAATGATAATGTTGTGAGTATATATATATATATTTTTTTTATAAAACATTTAATTGGTAGGTAAGAAGGTTAATTGATTAATAAGTAATTGAATTTATTGAGACGGAAAAGCTAGAAAACTAATTAACGATTACATGCTTATATCACTTTCATCATCAACGGTTCAAAAAACAAGTTTTTTTCGAAAGTGTTCATTTTTTAAATCCAAAACTTTTGTCAATTTTCCCCTTCTCCCTATTTTTGTCCTACTTTTATAGCAATTTCCCCTTCGAATTTCTATTTTCATATGAGCACTAACCAAATCCACCACCCCTCACTAACATTGGAACAAAATTTTATATATTTAACCTAAATTTTATGATTTTGAAAATTAGCCCTTCAAAAGGCTAATCCCCAAAGCAAGTGAACTGGCTCCTCTCCGGTCCTTTCTCTTCCGCCGATCAGTTAGTTCTCGAGTCGTCTCTCTCAAGCTAGGGCTGAGCCAACCATTCCGCGTTTTCTCGTCTGCTTCGCCGGTGTTCAAAGAGGCGATAGGTAAAGTTACATTCAATTTCCATTTCGAAATTTCCTTTTCCACTAGTCTTGTGCTAGAATTCTCTCGGTAACGTAGGAAAACGCCATGATAGAGCAAATTTGGTCTCAGGTTTTGTGTCTTTTCGTGTACTGTAAGATATGGGAAGGAGGATTTTGAACGATGCATTAAGAGCTATTGTCAATGCTGAGAGGAGGGGAAAAGCTATGGTGGAACTGAAACCCATTTCGACTGTCATGTCTTCTTTCCTGAAAGTCATGAAAGATCACGGTAAAACTTACGTCTCTCTAGCTTTTTGGATGCTGAACTGACTTGGATTTTACCCTTCTTTAAGTCCTATTTATTGCTTTGGATTTCTGCTCCAGTGTTCTACTTCATGCCTGCAAGTGATAGATGGATATTGGCATTTCCTTCATGTTGAGCTTCTTCGTGATTATTTTGTATCTTTCTCTATGTGGTTGATTTCTTTATTTCCCTGGATTTTGTTGTTTTTTGTGAATGTATTGTTTGCATTTCAAGTGCAAAATGATTTCCATCTCTTGTTCTGATATTTAAAAGGAGGAAAAAAGCTTAGTTGGTCAACTTGCCTCCTCTGGGTTTTACTGTGATTGTACTGCTGCTTGTTGCTATGTAGTTGTTGGCTAGCCTAGAATGACTTGAAGTTAGAAGTTTTGGAGAGCTTTCAGTGTGGAGATATAGACCTTTTATCCTCCGTTTCACTGTTTTTTATTGATAGAGGAGGAAGAGTTGGCAAAAGTTTTGCTACTAACATCAAATCAAATACAATGAACCCCCAATCAACTTCTGCTCATAAGGATTCTGAATTGTTTTTAAGAATATTTTCATTACTTTATACTTGACTACACATGTTTCTCCCTGGGCCTAACTGTAGACTCATTGCTGTTGTGAAATTTGAGTTTTAAACCTCTTTTTTGATGTACAATATTCAGAATATTGAAACAACCTTGGGTGCTTACATTCTAGATTATAACTTCATCCAGCTCCTTATTAATTAGAATGCAACCTAGCATGATTTTACTTCTATGTTTGCCATGAGGATCTAGGAAGGTTTTAATTGAAACGACCTTGCCTATATCTTGAAGAGTTCATTGAAGATCTTCCAGTGTCTATTAGCTCTGACAAATATGGTCAATGACTTCTTCCTGCTTCCCGGCCCTATGGATTATGTTTATTCTAATTTTACTGGGATCTAACTCAAAGGGCAGGAAATTTGTTGAACACATTTAAATTGAAATTTATTTCTTCAATTCACCTAATCATCTGATATTGAATTGAATTTTAATAGTCACAAAAATTTATGATCGCATTGCAAGTCATTTGTAGTCCAAAAGTTTGATATCTGCCTATCCTAGAGTGCACTATCACCGTTGGTAGCCATTGTAGTTCTAATGGAACAGGGAGGGGAAAAATCGGAACATTAGCAATATTGGAAGTTATATAATGTGAACACATTAATGTTTGCTAGTTAGTACGAGTCCTTTCTATCGGGAATTTTATGAAAATAGTTATACCAATTTTTTTTCCAGTCTTTGCTTGTTGGTTATTTTGATGTCATTGAGTTGTAAACTATTCATCTTCACTGCTAATATTGACGGTTCTGATACTACTAATTGACCTTTTCTTAAAAAACAACAGTAAATTTGTACTGTTATTGTTAAGGGTTTCAAATTAATGATCTACTCCGTAAGTTCACCTCATTTATGGAGTCTTCAAATTTTATGTAAAGGATATATCAAGGACTATCAAGTTCACGATTCACAAAGAGTCGGAAGGATAACAGTTGAGCTGCAAGGTAGGGTCAAAGATTGCAAGGCTATCACCCACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGATTACGAACACTACCAACACATCAGGTGTTTGAACTAATATATTTTACATTCGAGTCTGAATGGATTCGTCAGTCAATGTTTATTATATCTAGTTGTCCACTTTGGTCATTTGTCTACCCATGTTGAATTGAATCAACCAAAGTGGTCAATATGCAGTTCATTTAGTTAACATTATAGCTGGCAAAAACTATATAGGATCGTAATTCAAAATTTAGAGACAAGTGATTATTTTTTTTTTCTTTTAGAAGTTCAGAGGCTAAATAAACATAACCATCAAAATTTATGATGGCATGCTTGTTGCTTGGCCGAGTGGGTCTTGTTTATTTAACCAAAATTCTCACTCTCCCTTGTCTGCAGTGGGGCAATGTCGTGATAACTAAATAGCCTATTCTGACTGGATAAATTCTTGGCCAAGTAGGTCTTTTGTGTATATTAACCAAATATTTTATTCTCCTGTCTCTACAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGAGGTCAGGTTCTTGGATTCTTTCATTAGAGAGCCTCCTTGTTTGGCTGTTCCTTGATTGGAGATCCATGTGAGTTTTTTTCTTTTTCAGATGTTTCCCATATTGCATTGGGATCTTCTTATGGCTTAG

mRNA sequence

ATGGCTCCCTTCAAAAGGCTAATCCCCAAAGCAAGTGAACTGGCTCCTCTCCGGTCCTTTCTCTTCCGCCGATCAGTTAGTTCTCGAGTCGTCTCTCTCAAGCTAGGGCTGAGCCAACCATTCCGCGTTTTCTCGTCTGCTTCGCCGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGAGGTCAGATGTTTCCCATATTGCATTGGGATCTTCTTATGGCTTAG

Coding sequence (CDS)

ATGGCTCCCTTCAAAAGGCTAATCCCCAAAGCAAGTGAACTGGCTCCTCTCCGGTCCTTTCTCTTCCGCCGATCAGTTAGTTCTCGAGTCGTCTCTCTCAAGCTAGGGCTGAGCCAACCATTCCGCGTTTTCTCGTCTGCTTCGCCGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGAGGTCAGATGTTTCCCATATTGCATTGGGATCTTCTTATGGCTTAG

Protein sequence

MAPFKRLIPKASELAPLRSFLFRRSVSSRVVSLKLGLSQPFRVFSSASPWGYVVITTPEGILDHEEAMKRNVGGQMFPILHWDLLMA
Homology
[Close]
BLAST of Lsi08G003530 vs. ExPASy Swiss-Prot
Match: O82205 (40S ribosomal protein S15a-2 OS=Arabidopsis thaliana OX=3702 GN=RPS15AB PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.5e-09
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGY+VITTP+GILDHEEA+KRNVGGQ+    H
Sbjct: 98  WGYIVITTPDGILDHEEAIKRNVGGQVLGFFH 129

[Close]
BLAST of Lsi08G003530 vs. ExPASy Swiss-Prot
Match: Q9M0E0 (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana OX=3702 GN=RPS15AE PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-08
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQM 77
           WGYVVITTP+GILDHEEA+KRNVGGQ+
Sbjct: 98  WGYVVITTPDGILDHEEAIKRNVGGQV 124

[Close]
BLAST of Lsi08G003530 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 3.7e-04
Identity = 17/27 (62.96%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQM 77
           +GY+V+TT  GI+DHEEA K+NVGG++
Sbjct: 99  FGYIVLTTSAGIMDHEEARKKNVGGKV 125

[Close]
BLAST of Lsi08G003530 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 44.3 bits (103), Expect = 8.3e-04
Identity = 16/27 (59.26%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQM 77
           +GY+V+TT  GI+DHEEA ++NVGG++
Sbjct: 99  FGYIVLTTSAGIMDHEEARRKNVGGKV 125

[Close]
BLAST of Lsi08G003530 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 44.3 bits (103), Expect = 8.3e-04
Identity = 16/27 (59.26%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQM 77
           +GY+V+TT  GI+DHEEA ++NVGG++
Sbjct: 99  FGYIVLTTSAGIMDHEEARRKNVGGKV 125

[Close]
BLAST of Lsi08G003530 vs. ExPASy TrEMBL
Match: A0A5D3D2U5 (40S ribosomal protein S15a-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00640 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGYVVITTPEGILDHEEAMKRNVGGQ+    H
Sbjct: 98  WGYVVITTPEGILDHEEAMKRNVGGQVLGFFH 129

[Close]
BLAST of Lsi08G003530 vs. ExPASy TrEMBL
Match: A0A0A0KDZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041710 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGYVVITTPEGILDHEEAMKRNVGGQ+    H
Sbjct: 98  WGYVVITTPEGILDHEEAMKRNVGGQVLGFFH 129

[Close]
BLAST of Lsi08G003530 vs. ExPASy TrEMBL
Match: A0A1S3BDC0 (40S ribosomal protein S15a-2-like OS=Cucumis melo OX=3656 GN=LOC103488655 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGYVVITTPEGILDHEEAMKRNVGGQ+    H
Sbjct: 98  WGYVVITTPEGILDHEEAMKRNVGGQVLGFFH 129

[Close]
BLAST of Lsi08G003530 vs. ExPASy TrEMBL
Match: A0A218XRV3 (40S ribosomal protein S15a-5-like OS=Punica granatum OX=22663 GN=LOC116215834 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.3e-07
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 18  RSFLFRRSVSSRVVSLKLGLSQPFRVFS-SASPWGYVVITTPEGILDHEEAMKRNVGGQM 77
           R+ ++R+ + +R +       + +RV +     WGYVV+TTPEGILDHEEAMKRNVGGQ+
Sbjct: 72  RALMYRQDLKAREI-------EHYRVRTLPTHQWGYVVMTTPEGILDHEEAMKRNVGGQV 129

Query: 78  FPILH 82
               H
Sbjct: 132 LGYFH 129

[Close]
BLAST of Lsi08G003530 vs. ExPASy TrEMBL
Match: A0A6J1D967 (40S ribosomal protein S15a-5-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018536 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.3e-07
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGYVVITTPEGILDHEEAM+RNVGGQ+    H
Sbjct: 98  WGYVVITTPEGILDHEEAMRRNVGGQVLGYFH 129

[Close]
BLAST of Lsi08G003530 vs. NCBI nr
Match: XP_008445702.1 (PREDICTED: 40S ribosomal protein S15a-2-like [Cucumis melo] >KAA0033107.1 40S ribosomal protein S15a-2-like [Cucumis melo var. makuwa] >TYK17126.1 40S ribosomal protein S15a-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 5.9e-07
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGYVVITTPEGILDHEEAMKRNVGGQ+    H
Sbjct: 98  WGYVVITTPEGILDHEEAMKRNVGGQVLGFFH 129

[Close]
BLAST of Lsi08G003530 vs. NCBI nr
Match: XP_004140873.1 (40S ribosomal protein S15a-2 [Cucumis sativus] >KGN45986.1 hypothetical protein Csa_004829 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 5.9e-07
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGYVVITTPEGILDHEEAMKRNVGGQ+    H
Sbjct: 98  WGYVVITTPEGILDHEEAMKRNVGGQVLGFFH 129

[Close]
BLAST of Lsi08G003530 vs. NCBI nr
Match: XP_038884441.1 (40S ribosomal protein S15a-5-like [Benincasa hispida])

HSP 1 Score: 64.3 bits (155), Expect = 5.9e-07
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGYVVITTPEGILDHEEAMKRNVGGQ+    H
Sbjct: 98  WGYVVITTPEGILDHEEAMKRNVGGQVLGFFH 129

[Close]
BLAST of Lsi08G003530 vs. NCBI nr
Match: XP_022150338.1 (40S ribosomal protein S15a-5-like isoform X2 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-06
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGYVVITTPEGILDHEEAM+RNVGGQ+    H
Sbjct: 98  WGYVVITTPEGILDHEEAMRRNVGGQVLGYFH 129

[Close]
BLAST of Lsi08G003530 vs. NCBI nr
Match: XP_031407470.1 (40S ribosomal protein S15a-5-like [Punica granatum] >OWM87550.1 hypothetical protein CDL15_Pgr022662 [Punica granatum] >PKI74653.1 hypothetical protein CRG98_004980 [Punica granatum])

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-06
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 18  RSFLFRRSVSSRVVSLKLGLSQPFRVFS-SASPWGYVVITTPEGILDHEEAMKRNVGGQM 77
           R+ ++R+ + +R +       + +RV +     WGYVV+TTPEGILDHEEAMKRNVGGQ+
Sbjct: 72  RALMYRQDLKAREI-------EHYRVRTLPTHQWGYVVMTTPEGILDHEEAMKRNVGGQV 129

Query: 78  FPILH 82
               H
Sbjct: 132 LGYFH 129

[Close]
BLAST of Lsi08G003530 vs. TAIR 10
Match: AT2G19720.1 (ribosomal protein S15A B )

HSP 1 Score: 61.2 bits (147), Expect = 4.7e-10
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQMFPILH 82
           WGY+VITTP+GILDHEEA+KRNVGGQ+    H
Sbjct: 98  WGYIVITTPDGILDHEEAIKRNVGGQVLGFFH 129

[Close]
BLAST of Lsi08G003530 vs. TAIR 10
Match: AT4G29430.1 (ribosomal protein S15A E )

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQM 77
           WGYVVITTP+GILDHEEA+KRNVGGQ+
Sbjct: 98  WGYVVITTPDGILDHEEAIKRNVGGQV 124

[Close]
BLAST of Lsi08G003530 vs. TAIR 10
Match: AT2G39590.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 45.4 bits (106), Expect = 2.6e-05
Identity = 17/27 (62.96%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQM 77
           +GY+V+TT  GI+DHEEA K+NVGG++
Sbjct: 105 FGYIVLTTSAGIMDHEEARKKNVGGKV 131

[Close]
BLAST of Lsi08G003530 vs. TAIR 10
Match: AT1G07770.1 (ribosomal protein S15A )

HSP 1 Score: 44.3 bits (103), Expect = 5.9e-05
Identity = 16/27 (59.26%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQM 77
           +GY+V+TT  GI+DHEEA ++NVGG++
Sbjct: 99  FGYIVLTTSAGIMDHEEARRKNVGGKV 125

[Close]
BLAST of Lsi08G003530 vs. TAIR 10
Match: AT1G07770.2 (ribosomal protein S15A )

HSP 1 Score: 44.3 bits (103), Expect = 5.9e-05
Identity = 16/27 (59.26%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 50  WGYVVITTPEGILDHEEAMKRNVGGQM 77
           +GY+V+TT  GI+DHEEA ++NVGG++
Sbjct: 99  FGYIVLTTSAGIMDHEEARRKNVGGKV 125

The following BLAST results are available for this feature:
BLAST of Lsi08G003530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O822056.5e-0975.0040S ribosomal protein S15a-2 OS=Arabidopsis thaliana OX=3702 GN=RPS15AB PE=2 SV=... [more]
Q9M0E03.2e-0888.8940S ribosomal protein S15a-5 OS=Arabidopsis thaliana OX=3702 GN=RPS15AE PE=1 SV=... [more]
O806463.7e-0462.9640S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=... [more]
P427988.3e-0459.2640S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=... [more]
Q003328.3e-0459.2640S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3[more]
BLAST of Lsi08G003530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D2U52.9e-0784.3840S ribosomal protein S15a-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A0A0KDZ72.9e-0784.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041710 PE=3 SV=1[more]
A0A1S3BDC02.9e-0784.3840S ribosomal protein S15a-2-like OS=Cucumis melo OX=3656 GN=LOC103488655 PE=3 S... [more]
A0A218XRV38.3e-0747.6940S ribosomal protein S15a-5-like OS=Punica granatum OX=22663 GN=LOC116215834 PE... [more]
A0A6J1D9678.3e-0781.2540S ribosomal protein S15a-5-like isoform X2 OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of Lsi08G003530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445702.15.9e-0784.38PREDICTED: 40S ribosomal protein S15a-2-like [Cucumis melo] >KAA0033107.1 40S ri... [more]
XP_004140873.15.9e-0784.3840S ribosomal protein S15a-2 [Cucumis sativus] >KGN45986.1 hypothetical protein ... [more]
XP_038884441.15.9e-0784.3840S ribosomal protein S15a-5-like [Benincasa hispida][more]
XP_022150338.11.7e-0681.2540S ribosomal protein S15a-5-like isoform X2 [Momordica charantia][more]
XP_031407470.11.7e-0647.6940S ribosomal protein S15a-5-like [Punica granatum] >OWM87550.1 hypothetical pro... [more]
BLAST of Lsi08G003530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G19720.14.7e-1075.00ribosomal protein S15A B [more]
AT4G29430.12.3e-0988.89ribosomal protein S15A E [more]
AT2G39590.12.6e-0562.96Ribosomal protein S8 family protein [more]
AT1G07770.15.9e-0559.26ribosomal protein S15A [more]
AT1G07770.25.9e-0559.26ribosomal protein S15A [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1490.10coord: 5..78
e-value: 1.2E-10
score: 42.9
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 25..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G003530.1Lsi08G003530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome