Lsi08G002930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G002930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Photosystem II CP47 reaction center protein
Location	chr08: 7637771 .. 7639129 (-)
RNA-Seq Expression	Lsi08G002930
Synteny	Lsi08G002930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTGTTCGTCCACCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTATTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCAGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGTTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTAGCTTTTTATGATTATATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTGGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACAGTTGAGTTCTATGGCGGTGAACTCAATGGGGTCAGTTATAGTGATCCTGCTACTGTGAAAAAATATGCTAGACGTGCTCAATTGGGTGAAATTTTTGAATTAGATCGTGCTACTTTGAAATCCGATGGGGTTTTTCGTAGCAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCGTTTGCTTTGCTCTTCTTCTTCGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAA

mRNA sequence

ATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTGTTCGTCCACCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTATTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCAGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGTTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTAGCTTTTTATGATTATATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTGGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACAGTTGAGTTCTATGGCGGTGAACTCAATGGGGTCAGTTATAGTGATCCTGCTACTGTGAAAAAATATGCTAGACGTGCTCAATTGGGTGAAATTTTTGAATTAGATCGTGCTACTTTGAAATCCGATGGGGTTTTTCGTAGCAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCGTTTGCTTTGCTCTTCTTCTTCGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAA

Coding sequence (CDS)

ATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTGTTCGTCCACCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTATTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCAGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGTTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTAGCTTTTTATGATTATATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTGGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACAGTTGAGTTCTATGGCGGTGAACTCAATGGGGTCAGTTATAGTGATCCTGCTACTGTGAAAAAATATGCTAGACGTGCTCAATTGGGTGAAATTTTTGAATTAGATCGTGCTACTTTGAAATCCGATGGGGTTTTTCGTAGCAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCGTTTGCTTTGCTCTTCTTCTTCGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAA

Protein sequence

MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGAGDRSPGERRP

Homology

[Close]

BLAST of Lsi08G002930 vs. ExPASy Swiss-Prot
Match: Q2QD63 (Photosystem II CP47 reaction center protein OS=Cucumis sativus OX=3659 GN=psbB PE=3 SV=1)

HSP 1 Score: 919.8 bits (2376), Expect = 1.2e-266
Identity = 438/441 (99.32%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHI+FSGLCFLAAIWHWVYWDLEIF DERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHILFSGLCFLAAIWHWVYWDLEIFSDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVS GLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy Swiss-Prot
Match: Q09WZ1 (Photosystem II CP47 reaction center protein OS=Morus indica OX=248361 GN=psbB PE=3 SV=1)

HSP 1 Score: 919.8 bits (2376), Expect = 1.2e-266
Identity = 436/441 (98.87%), Postives = 440/441 (99.77%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAEN+SLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENKSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHP+FRDKEGREL+VRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPIFRDKEGRELYVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy Swiss-Prot
Match: Q0ZIZ3 (Photosystem II CP47 reaction center protein OS=Vitis vinifera OX=29760 GN=psbB PE=3 SV=1)

HSP 1 Score: 919.8 bits (2376), Expect = 1.2e-266
Identity = 436/441 (98.87%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGL CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ+VNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRV AGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy Swiss-Prot
Match: Q7FNS4 (Photosystem II CP47 reaction center protein OS=Atropa belladonna OX=33113 GN=psbB PE=3 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 2.0e-266
Identity = 435/441 (98.64%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           +TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  VTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy Swiss-Prot
Match: Q3C1K3 (Photosystem II CP47 reaction center protein OS=Nicotiana sylvestris OX=4096 GN=psbB PE=3 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 2.0e-266
Identity = 435/441 (98.64%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           +TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  VTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy TrEMBL
Match: A0A1P8LE33 (Photosystem II CP47 reaction center protein OS=Citrullus mucosospermus OX=519315 GN=psbB PE=3 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 4.6e-266
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy TrEMBL
Match: A0A2Z2CGC0 (Photosystem II CP47 reaction center protein OS=Coccinia grandis OX=387127 GN=psbB PE=3 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 4.6e-266
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy TrEMBL
Match: X2F2N4 (Photosystem II CP47 reaction center protein OS=Lagenaria siceraria OX=3668 GN=psbB PE=3 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 4.6e-266
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy TrEMBL
Match: A0A0S2IFN4 (Photosystem II CP47 reaction center protein OS=Cucurbita moschata OX=3662 GN=psbB PE=3 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 4.6e-266
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. ExPASy TrEMBL
Match: A0A6H0ERT8 (Photosystem II CP47 reaction center protein OS=Luffa aegyptiaca OX=3670 GN=psbB PE=3 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 4.6e-266
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. NCBI nr
Match: YP_009317412.1 (photosystem II 47 kDa protein [Coccinia grandis] >YP_009326015.1 photosystem II 47 kDa protein [Citrullus lanatus] >YP_009348057.1 photosystem II 47 kDa protein [Citrullus mucosospermus] >YP_009420820.1 photosystem II 47 kDa protein [Citrullus colocynthis] >YP_009431583.1 photosystem II 47 kDa protein [Citrullus amarus] >YP_009431668.1 photosystem II 47 kDa protein [Citrullus rehmii] >YP_009447476.1 photosystem II 47 kDa protein [Cucurbita maxima] >YP_009447561.1 photosystem II 47 kDa protein [Cucurbita moschata] >YP_009456172.1 photosystem II 47 kDa protein [Lagenaria siceraria] >YP_009505106.1 photosystem II 47 kDa protein [Cucurbita pepo] >YP_009560861.1 PsbB [Trichosanthes kirilowii] >YP_009752016.1 photosystem II 47 kDa protein [Cionosicys macranthus] >YP_009752353.1 photosystem II 47 kDa protein [Bryonia marmorata] >YP_009753115.1 photosystem II 47 kDa protein [Corallocarpus boehmii] >YP_009753284.1 photosystem II 47 kDa protein [Nothoalsomitra suberosa] >YP_009753731.1 photosystem II 47 kDa protein [Trichosanthes nervifolia] >YP_010131120.1 photosystem II CP47 chlorophyll apoprotein [Benincasa hispida] >ALO21734.1 PsbB [Cucurbita argyrosperma] >ALO21777.1 PsbB [Cucurbita argyrosperma var. palmeri] >ALO21951.1 PsbB [Cucurbita cordata] >ALO21984.1 PsbB [Cucurbita digitata] >ALO22039.1 PsbB [Cucurbita ecuadorensis] >ALO22131.1 PsbB [Cucurbita ficifolia] >ALO22240.1 PsbB [Cucurbita lundelliana] >ALO22341.1 PsbB [Cucurbita maxima subsp. andreana] >ALO22460.1 PsbB [Cucurbita okeechobeensis] >ALO22533.1 PsbB [Cucurbita okeechobeensis subsp. martinezii] >ALO22583.1 PsbB [Cucurbita pepo subsp. fraterna] >ALO22664.1 PsbB [Cucurbita pepo subsp. ovifera] >ALO22701.1 PsbB [Cucurbita pepo var. ozarkana] >ALO22751.1 PsbB [Cucurbita pepo subsp. pepo] >ALO22801.1 PsbB [Cucurbita pepo var. texana] >ALO22876.1 PsbB [Cucurbita pedatifolia] >APW82488.1 photosystem II 47 kDa protein [Citrullus lanatus subsp. vulgaris] >QIT04076.1 photosystem II 47 kDa protein [Luffa aegyptiaca] >QKX48500.1 photosystem II CP47 chlorophyll apoprotein [Luffa acutangula] >QNM38557.1 photosystem II CP47 chlorophyll apoprotein [Lagenaria siceraria var. microcarpa] >QZL38619.1 photosystem II 47 kDa protein [Citrullus naudinianus] >QZL38707.1 photosystem II 47 kDa protein [Citrullus ecirrhosus])

HSP 1 Score: 926.4 bits (2393), Expect = 9.4e-266
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. NCBI nr
Match: ALO21850.1 (PsbB [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 926.0 bits (2392), Expect = 1.2e-265
Identity = 440/441 (99.77%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. NCBI nr
Match: YP_009752692.1 (photosystem II 47 kDa protein [Ampelosycios humblotii] >QIT05173.1 photosystem II 47 kDa protein [Ampelosycios humblotii])

HSP 1 Score: 926.0 bits (2392), Expect = 1.2e-265
Identity = 440/441 (99.77%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. NCBI nr
Match: YP_009525212.1 (photosystem II CP47 chlorophyll apoprotein [Hodgsonia macrocarpa] >AXR94541.1 photosystem II CP47 chlorophyll apoprotein [Hodgsonia macrocarpa] >AXR94627.1 photosystem II CP47 chlorophyll apoprotein [Hodgsonia macrocarpa] >AXR94711.1 photosystem II CP47 chlorophyll apoprotein [Hodgsonia macrocarpa] >AXR94796.1 photosystem II CP47 chlorophyll apoprotein [Hodgsonia macrocarpa])

HSP 1 Score: 925.2 bits (2390), Expect = 2.1e-265
Identity = 440/441 (99.77%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVF+DKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFKDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. NCBI nr
Match: YP_009752438.1 (photosystem II 47 kDa protein [Trichosanthes tricuspidata] >YP_009753646.1 photosystem II 47 kDa protein [Trichosanthes wallichiana] >QIT04665.1 photosystem II 47 kDa protein [Trichosanthes wallichiana] >QIT04834.1 photosystem II 47 kDa protein [Trichosanthes tricuspidata])

HSP 1 Score: 925.2 bits (2390), Expect = 2.1e-265
Identity = 440/441 (99.77%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGL+ENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLSENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. TAIR 10
Match: ATCG00680.1 (photosystem II reaction center protein B )

HSP 1 Score: 914.8 bits (2363), Expect = 2.7e-266
Identity = 433/441 (98.19%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT 60
           MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGW+ITGGT
Sbjct: 25  MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGT 84

Query: 61  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 120
           ITNPG+WSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF
Sbjct: 85  ITNPGLWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLF 144

Query: 121 LSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIA 180
           LSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAWGVEGFDPFVPGGIASHHIA
Sbjct: 145 LSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIA 204

Query: 181 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 240
           AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP
Sbjct: 205 AGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTP 264

Query: 241 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGL 300
           IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAW+KIPEKLAFYDYIGNNPAKGGL
Sbjct: 265 IELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWAKIPEKLAFYDYIGNNPAKGGL 324

Query: 301 FRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 360
           FRAGSMDNGDGIAVGWLGHPVFR+KEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR
Sbjct: 325 FRAGSMDNGDGIAVGWLGHPVFRNKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFR 384

Query: 361 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 420
           RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR
Sbjct: 385 RAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFR 444

Query: 421 SSPRGWFTFGHASFALLFFFG 442
           SSPRGWFTFGHASFALLFFFG
Sbjct: 445 SSPRGWFTFGHASFALLFFFG 465

[Close]

BLAST of Lsi08G002930 vs. TAIR 10
Match: ATCG00280.1 (photosystem II reaction center protein C )

HSP 1 Score: 77.0 bits (188), Expect = 4.3e-14
Identity = 71/268 (26.49%), Postives = 116/268 (43.28%), Query Frame = 0


Query: 2   HTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSI-TGGT 61
           H  L+  WAG+M L+E+A F P      PM+ QG+ ++P +  L       GW +  GG 
Sbjct: 56  HAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-------GWGVGPGGE 115

Query: 62  ITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER------TGKPSLDLPKI 121
           + +   +   GV   H++ S +     I+H +     +  +E         K    +  I
Sbjct: 116 VIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFGYVWKDRNKMTTI 175

Query: 122 FGIHLFLSGLGCF--GFGAFHVTGLY---GPGIWVSDPYGLTGRVQAVNPAWGVEGFDPF 181
            GIHL L G+G F   F A +  G+Y    PG    D   +T    + +  +G     PF
Sbjct: 176 LGIHLILLGVGAFLLVFKALYFGGVYDTWAPG--GGDVRKITNLTLSPSVIFGYLLKSPF 235

Query: 182 VPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIA 241
              G          I   H+  G++ I  G++H+  +P     + L + + E  LS S+A
Sbjct: 236 GGEGWIVSVDDLEDIIGGHVWLGSICIFGGIWHILTKPFAWARRAL-VWSGEAYLSYSLA 295

Query: 242 AVFFAAFVVAGTMWYGSATTPIELFGPT 248
           A+    F+    +W+ +   P E +GPT
Sbjct: 296 ALSVCGFIACCFVWFNNTAYPSEFYGPT 305

The following BLAST results are available for this feature:

BLAST of Lsi08G002930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD63	1.2e-266	99.32	Photosystem II CP47 reaction center protein OS=Cucumis sativus OX=3659 GN=psbB P...	[more]
Q09WZ1	1.2e-266	98.87	Photosystem II CP47 reaction center protein OS=Morus indica OX=248361 GN=psbB PE...	[more]
Q0ZIZ3	1.2e-266	98.87	Photosystem II CP47 reaction center protein OS=Vitis vinifera OX=29760 GN=psbB P...	[more]
Q7FNS4	2.0e-266	98.64	Photosystem II CP47 reaction center protein OS=Atropa belladonna OX=33113 GN=psb...	[more]
Q3C1K3	2.0e-266	98.64	Photosystem II CP47 reaction center protein OS=Nicotiana sylvestris OX=4096 GN=p...	[more]

BLAST of Lsi08G002930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1P8LE33	4.6e-266	100.00	Photosystem II CP47 reaction center protein OS=Citrullus mucosospermus OX=519315...	[more]
A0A2Z2CGC0	4.6e-266	100.00	Photosystem II CP47 reaction center protein OS=Coccinia grandis OX=387127 GN=psb...	[more]
X2F2N4	4.6e-266	100.00	Photosystem II CP47 reaction center protein OS=Lagenaria siceraria OX=3668 GN=ps...	[more]
A0A0S2IFN4	4.6e-266	100.00	Photosystem II CP47 reaction center protein OS=Cucurbita moschata OX=3662 GN=psb...	[more]
A0A6H0ERT8	4.6e-266	100.00	Photosystem II CP47 reaction center protein OS=Luffa aegyptiaca OX=3670 GN=psbB ...	[more]

BLAST of Lsi08G002930 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009317412.1	9.4e-266	100.00	photosystem II 47 kDa protein [Coccinia grandis] >YP_009326015.1 photosystem II ...	[more]
ALO21850.1	1.2e-265	99.77	PsbB [Cucurbita argyrosperma subsp. sororia]	[more]
YP_009752692.1	1.2e-265	99.77	photosystem II 47 kDa protein [Ampelosycios humblotii] >QIT05173.1 photosystem I...	[more]
YP_009525212.1	2.1e-265	99.77	photosystem II CP47 chlorophyll apoprotein [Hodgsonia macrocarpa] >AXR94541.1 ph...	[more]
YP_009752438.1	2.1e-265	99.77	photosystem II 47 kDa protein [Trichosanthes tricuspidata] >YP_009753646.1 photo...	[more]

BLAST of Lsi08G002930 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00680.1	2.7e-266	98.19	photosystem II reaction center protein B	[more]
ATCG00280.1	4.3e-14	26.49	photosystem II reaction center protein C	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.680.10	Photosystem II CP47 reaction center protein	coord: 248..420 e-value: 1.4E-105 score: 352.5
None	No IPR available	PANTHER	PTHR33180:SF14	PHOTOSYSTEM II CP47 REACTION CENTER PROTEIN	coord: 1..442
IPR017486	Photosystem II CP47 reaction centre protein	TIGRFAM	TIGR03039	TIGR03039	coord: 1..441 e-value: 8.8E-254 score: 840.7
IPR000932	Photosystem antenna protein-like	PFAM	PF00421	PSII	coord: 1..441 e-value: 1.6E-231 score: 769.4
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 1..442
IPR036001	Photosystem antenna protein-like superfamily	SUPERFAMILY	161077	Photosystem II antenna protein-like	coord: 1..441

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G002930.1	Lsi08G002930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0015979	photosynthesis
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
cellular_component	GO:0009521	photosystem
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity